Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:34:31 (3207696): wrapper (7.7.26015): starting
12:34:31 (3207696): wrapper: running run_atlas (--nthreads 12)
[2025-05-25 12:34:31] Arguments: --nthreads 12
[2025-05-25 12:34:31] Threads: 12
[2025-05-25 12:34:31] Checking for CVMFS
[2025-05-25 12:34:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 12:34:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 12:34:32] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 12:34:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 12:34:32] 2.11.5.0 1587847 9681 263308 146412 0 603 26628943 45568001 13413 130560 0 101059958 99.812 54407825 32610 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-25 12:34:32] CVMFS is ok
[2025-05-25 12:34:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 12:34:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 12:34:32] Further information can be found at the LHC@home message board.
[2025-05-25 12:34:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 12:34:32] Checking for apptainer binary...
[2025-05-25 12:34:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 12:34:32] Running /usr/bin/apptainer --version
[2025-05-25 12:34:32] apptainer version 1.4.0-1.el9
[2025-05-25 12:34:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 12:34:32] wns0032.triumf.lcg
[2025-05-25 12:34:32] apptainer works
[2025-05-25 12:34:32] Set ATHENA_PROC_NUMBER=12
[2025-05-25 12:34:32] Set ATHENA_CORE_NUMBER=12
[2025-05-25 12:34:32] Starting ATLAS job with PandaID=6665735357
[2025-05-25 12:34:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 12:37:44]  *** The last 200 lines of the pilot log: ***
[2025-05-25 12:37:44] 2025-05-25 19:37:29,072 | INFO     | extracted standard info from prmon json
[2025-05-25 12:37:44] 2025-05-25 19:37:29,072 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 12:37:44] 2025-05-25 19:37:29,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 12:37:44] 2025-05-25 19:37:29,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | WARNING  | found no stored workdir sizes
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | INFO     | will not add max space = 0 B to job metrics
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | WARNING  | wrong length of table data, x=[1748201708.0], y=[1098.0] (must be same and length>=4)
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | INFO     | ..............................
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | INFO     | . Timing measurements:
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | INFO     | . get job = 0 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . initial setup = 3 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . payload setup = 5 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . stage-in = 0 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . payload execution = 17 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . stage-out = 0 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . log creation = 0 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | ..............................
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665735357/pilotlog.txt
[2025-05-25 12:37:44] 2025-05-25 19:37:29,161 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-25 12:37:44] - Log from pilotlog.txt -
[2025-05-25 12:37:44] 2025-05-25 19:37:29,072 | INFO     | extracted standard info from prmon json
[2025-05-25 12:37:44] 2025-05-25 19:37:29,072 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 12:37:44] 2025-05-25 19:37:29,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 12:37:44] 2025-05-25 19:37:29,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | WARNING  | found no stored workdir sizes
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | INFO     | will not add max space = 0 B to job metrics
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | WARNING  | wrong length of table data, x=[1748201708.0], y=[1098.0] (must be same and length>=4)
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | INFO     | ..............................
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | INFO     | . Timing measurements:
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | INFO     | . get job = 0 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . initial setup = 3 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . payload setup = 5 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . stage-in = 0 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . payload execution = 17 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . stage-out = 0 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . log creation = 0 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | ..............................
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665735357/pilotlog.txt
[2025-05-25 12:37:44] 2025-05-25 19:37:29,161 | WARNING  | 
[2025-05-25 12:37:44] [begin log extracts]
[2025-05-25 12:37:44] - Log from pilotlog.txt -
[2025-05-25 12:37:44] 2025-05-25 19:37:29,072 | INFO     | extracted standard info from prmon json
[2025-05-25 12:37:44] 2025-05-25 19:37:29,072 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 12:37:44] 2025-05-25 19:37:29,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 12:37:44] 2025-05-25 19:37:29,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | WARNING  | found no stored workdir sizes
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | INFO     | will not add max space = 0 B to job metrics
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | WARNING  | wrong length of table data, x=[1748201708.0], y=[1098.0] (must be same and length>=4)
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | INFO     | ..............................
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | INFO     | . Timing measurements:
[2025-05-25 12:37:44] 2025-05-25 19:37:29,073 | INFO     | . get job = 0 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . initial setup = 3 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . payload setup = 5 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . stage-in = 0 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . payload execution = 17 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . stage-out = 0 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | . log creation = 0 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | ..............................
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-25 12:37:44] 2025-05-25 19:37:29,074 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665735357/pilotlog.txt
[2025-05-25 12:37:44] [end log extracts]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,161 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-25 12:37:44] 2025-05-25 19:37:29,162 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-25 12:37:44] 2025-05-25 19:37:29,301 | INFO     | 
[2025-05-25 12:37:44] 2025-05-25 19:37:29,301 | INFO     | job summary report
[2025-05-25 12:37:44] 2025-05-25 19:37:29,301 | INFO     | --------------------------------------------------
[2025-05-25 12:37:44] 2025-05-25 19:37:29,301 | INFO     | PanDA job id: 6665735357
[2025-05-25 12:37:44] 2025-05-25 19:37:29,301 | INFO     | task id: 44871837
[2025-05-25 12:37:44] 2025-05-25 19:37:29,301 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-25 12:35:16,688 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-25 12:37:44] 2025-05-25 19:37:29,301 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 12:37:44] 2025-05-25 19:37:29,308 | INFO     | pilot state: failed 
[2025-05-25 12:37:44] 2025-05-25 19:37:29,308 | INFO     | transexitcode: 65
[2025-05-25 12:37:44] 2025-05-25 19:37:29,308 | INFO     | exeerrorcode: 65
[2025-05-25 12:37:44] 2025-05-25 19:37:29,308 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-25 12:37:44] 2025-05-25 19:37:29,308 | INFO     | exitcode: 65
[2025-05-25 12:37:44] 2025-05-25 19:37:29,308 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-25 12:37:44] 2025-05-25 19:37:29,308 | INFO     | cpuconsumptiontime: 16 s
[2025-05-25 12:37:44] 2025-05-25 19:37:29,308 | INFO     | nevents: 0
[2025-05-25 12:37:44] 2025-05-25 19:37:29,308 | INFO     | neventsw: 0
[2025-05-25 12:37:44] 2025-05-25 19:37:29,308 | INFO     | pid: 3243919
[2025-05-25 12:37:44] 2025-05-25 19:37:29,308 | INFO     | pgrp: 3243919
[2025-05-25 12:37:44] 2025-05-25 19:37:29,308 | INFO     | corecount: 12
[2025-05-25 12:37:44] 2025-05-25 19:37:29,309 | INFO     | event service: False
[2025-05-25 12:37:44] 2025-05-25 19:37:29,309 | INFO     | sizes: {0: 2393567, 1: 2393766, 4: 2393972, 11: 2394000, 26: 2421620, 28: 2421620, 151: 2421890}
[2025-05-25 12:37:44] 2025-05-25 19:37:29,309 | INFO     | --------------------------------------------------
[2025-05-25 12:37:44] 2025-05-25 19:37:29,309 | INFO     | 
[2025-05-25 12:37:44] 2025-05-25 19:37:29,309 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-25 12:37:44] 2025-05-25 19:37:29,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,385 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,385 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 12:37:44] 2025-05-25 19:37:29,387 | INFO     | job 6665735357 has completed (purged errors)
[2025-05-25 12:37:44] 2025-05-25 19:37:29,388 | INFO     | overall cleanup function is called
[2025-05-25 12:37:44] 2025-05-25 19:37:30,394 | INFO     | --- collectZombieJob: --- 10, [3243919]
[2025-05-25 12:37:44] 2025-05-25 19:37:30,394 | INFO     | zombie collector waiting for pid 3243919
[2025-05-25 12:37:44] 2025-05-25 19:37:30,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 12:37:44] 2025-05-25 19:37:30,394 | INFO     | collected zombie processes
[2025-05-25 12:37:44] 2025-05-25 19:37:30,394 | INFO     | will attempt to kill all subprocesses of pid=3243919
[2025-05-25 12:37:44] 2025-05-25 19:37:30,741 | INFO     | process IDs to be killed: [3243919] (in reverse order)
[2025-05-25 12:37:44] 2025-05-25 19:37:30,820 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 12:37:44] 2025-05-25 19:37:30,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 12:37:44] 2025-05-25 19:37:30,836 | INFO     | did not find any defunct processes belonging to 3243919
[2025-05-25 12:37:44] 2025-05-25 19:37:30,848 | INFO     | did not find any defunct processes belonging to 3243919
[2025-05-25 12:37:44] 2025-05-25 19:37:30,848 | INFO     | ready for new job
[2025-05-25 12:37:44] 2025-05-25 19:37:30,848 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 12:37:44] 2025-05-25 19:37:30,850 | INFO     | **************************************
[2025-05-25 12:37:44] 2025-05-25 19:37:30,850 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 12:37:44] 2025-05-25 19:37:30,854 | INFO     | **************************************
[2025-05-25 12:37:44] 2025-05-25 19:37:30,854 | INFO     | 
[2025-05-25 12:37:44] 2025-05-25 19:37:30,856 | INFO     | architecture information:
[2025-05-25 12:37:44] 2025-05-25 19:37:30,856 | INFO     | executing command: cat /etc/os-release
[2025-05-25 12:37:44] 2025-05-25 19:37:30,908 | INFO     | cat /etc/os-release:
[2025-05-25 12:37:44] NAME="CentOS Linux"
[2025-05-25 12:37:44] VERSION="7 (Core)"
[2025-05-25 12:37:44] ID="centos"
[2025-05-25 12:37:44] ID_LIKE="rhel fedora"
[2025-05-25 12:37:44] VERSION_ID="7"
[2025-05-25 12:37:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 12:37:44] ANSI_COLOR="0;31"
[2025-05-25 12:37:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 12:37:44] HOME_URL="https://www.centos.org/"
[2025-05-25 12:37:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 12:37:44] 
[2025-05-25 12:37:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 12:37:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 12:37:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 12:37:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 12:37:44] 
[2025-05-25 12:37:44] 2025-05-25 19:37:30,909 | INFO     | **************************************
[2025-05-25 12:37:44] 2025-05-25 19:37:31,414 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-25 12:37:44] 2025-05-25 19:37:31,431 | INFO     | sufficient remaining disk space (1765974999040 B)
[2025-05-25 12:37:44] 2025-05-25 19:37:31,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 12:37:44] 2025-05-25 19:37:31,432 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 12:37:44] 2025-05-25 19:37:31,432 | INFO     | update_server=False
[2025-05-25 12:37:44] 2025-05-25 19:37:31,432 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 12:37:44] 2025-05-25 19:37:32,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 12:37:44] 2025-05-25 19:37:32,067 | INFO     | aborting loop
[2025-05-25 12:37:44] 2025-05-25 19:37:32,124 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 12:37:44] 2025-05-25 19:37:32,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 12:37:44] 2025-05-25 19:37:32,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 12:37:44] 2025-05-25 19:37:32,233 | INFO     | all payload control threads have been joined
[2025-05-25 12:37:44] 2025-05-25 19:37:32,438 | INFO     | [job] retrieve thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:32,503 | INFO     | all data control threads have been joined
[2025-05-25 12:37:44] 2025-05-25 19:37:32,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:32,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 12:37:44] 2025-05-25 19:37:32,741 | INFO     | all job control threads have been joined
[2025-05-25 12:37:44] 2025-05-25 19:37:32,776 | INFO     | [job] validate thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:32,910 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:32,986 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:33,073 | INFO     | [job] job monitor thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:33,085 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:33,239 | INFO     | [payload] control thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:33,370 | INFO     | [data] copytool_in thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:33,429 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 12:37:44] 2025-05-25 19:37:33,508 | INFO     | [data] control thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:33,548 | INFO     | [payload] failed_post thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:33,748 | INFO     | [job] control thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:33,777 | INFO     | [payload] validate_post thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:34,316 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 12:37:44] 2025-05-25 19:37:34,732 | INFO     | [data] copytool_out thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:35,321 | INFO     | [job] queue monitor thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:37,436 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 12:37:44] 2025-05-25 19:37:39,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697465067328)>', '<ExcThread(monitor, started 139696411760384)>']
[2025-05-25 12:37:44] 2025-05-25 19:37:40,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 12:37:44] 2025-05-25 19:37:40,172 | INFO     | [monitor] control thread has ended
[2025-05-25 12:37:44] 2025-05-25 19:37:44,494 | INFO     | all workflow threads have been joined
[2025-05-25 12:37:44] 2025-05-25 19:37:44,494 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 12:37:44] 2025-05-25 19:37:44,494 | INFO     | traces error code: 0
[2025-05-25 12:37:44] 2025-05-25 19:37:44,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 12:37:44] 2025-05-25 19:37:44,607 [wrapper] ==== pilot stdout END ====
[2025-05-25 12:37:44] 2025-05-25 19:37:44,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 12:37:44] 2025-05-25 19:37:44,610 [wrapper] pilotpid: 3219488
[2025-05-25 12:37:44] 2025-05-25 19:37:44,612 [wrapper] Pilot exit status: 0
[2025-05-25 12:37:44] 2025-05-25 19:37:44,619 [wrapper] pandaids: 6665735357
[2025-05-25 12:37:44] 2025-05-25 19:37:44,665 [wrapper] cleanup supervisor_pilot 3219500 3219489
[2025-05-25 12:37:44] 2025-05-25 19:37:44,667 [wrapper] Test setup, not cleaning
[2025-05-25 12:37:44] 2025-05-25 19:37:44,669 [wrapper] apfmon messages muted
[2025-05-25 12:37:44] 2025-05-25 19:37:44,670 [wrapper] ==== wrapper stdout END ====
[2025-05-25 12:37:44] 2025-05-25 19:37:44,673 [wrapper] ==== wrapper stderr END ====
[2025-05-25 12:37:44]  *** Error codes and diagnostics ***
[2025-05-25 12:37:44]     "exeErrorCode": 65,
[2025-05-25 12:37:44]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-25 12:37:44]     "pilotErrorCode": 1305,
[2025-05-25 12:37:44]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-25 12:37:44]  *** Listing of results directory ***
[2025-05-25 12:37:44] total 222268
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc    495897 May 25 09:36 pilot3.tar.gz
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc      5111 May 25 09:49 queuedata.json
[2025-05-25 12:37:44] -rwx------. 1 boinc boinc     37140 May 25 09:51 runpilot2-wrapper.sh
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc       100 May 25 12:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 12:37:44] -rwxr-xr-x. 1 boinc boinc      7986 May 25 12:34 run_atlas
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc       105 May 25 12:34 job.xml
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc      6600 May 25 12:34 init_data.xml
[2025-05-25 12:37:44] -rw-r--r--. 2 boinc boinc 223579467 May 25 12:34 EVNT.44871834._001503.pool.root.1
[2025-05-25 12:37:44] -rw-r--r--. 2 boinc boinc     15093 May 25 12:34 start_atlas.sh
[2025-05-25 12:37:44] drwxrwx--x. 2 boinc boinc      4096 May 25 12:34 shared
[2025-05-25 12:37:44] -rw-r--r--. 2 boinc boinc    508878 May 25 12:34 input.tar.gz
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc         0 May 25 12:34 boinc_lockfile
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc      2559 May 25 12:34 pandaJob.out
[2025-05-25 12:37:44] -rw-------. 1 boinc boinc    990803 May 25 12:34 agis_schedconf.cvmfs.json
[2025-05-25 12:37:44] -rw-------. 1 boinc boinc   1596740 May 25 12:34 agis_ddmendpoints.agis.ALL.json
[2025-05-25 12:37:44] drwx------. 4 boinc boinc      4096 May 25 12:34 pilot3
[2025-05-25 12:37:44] -rw-------. 1 boinc boinc       995 May 25 12:35 memory_monitor_summary.json
[2025-05-25 12:37:44] -rw-------. 1 boinc boinc     20574 May 25 12:35 log.44871837._037675.job.log.tgz.1
[2025-05-25 12:37:44] -rw-------. 1 boinc boinc        95 May 25 12:36 pilot_heartbeat.json
[2025-05-25 12:37:44] -rw-------. 1 boinc boinc      8354 May 25 12:37 heartbeat.json
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc       523 May 25 12:37 boinc_task_state.xml
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc      8192 May 25 12:37 boinc_mmap_file
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc        22 May 25 12:37 wrapper_checkpoint.txt
[2025-05-25 12:37:44] -rw-------. 1 boinc boinc      4352 May 25 12:37 pilotlog.txt
[2025-05-25 12:37:44] -rw-------. 1 boinc boinc     73941 May 25 12:37 log.44871837._037675.job.log.1
[2025-05-25 12:37:44] -rw-------. 1 boinc boinc       188 May 25 12:37 output.list
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc       620 May 25 12:37 runtime_log
[2025-05-25 12:37:44] -rw-------. 1 boinc boinc    112640 May 25 12:37 result.tar.gz
[2025-05-25 12:37:44] -rw-------. 1 boinc boinc       647 May 25 12:37 zDeMDm5jTd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUpOKDmUVbNsn.diag
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc      8484 May 25 12:37 runtime_log.err
[2025-05-25 12:37:44] -rw-r--r--. 1 boinc boinc     21436 May 25 12:37 stderr.txt
[2025-05-25 12:37:44] No HITS result produced
[2025-05-25 12:37:44]  *** Contents of shared directory: ***
[2025-05-25 12:37:44] total 218972
[2025-05-25 12:37:44] -rw-r--r--. 2 boinc boinc 223579467 May 25 12:34 ATLAS.root_0
[2025-05-25 12:37:44] -rw-r--r--. 2 boinc boinc     15093 May 25 12:34 start_atlas.sh
[2025-05-25 12:37:44] -rw-r--r--. 2 boinc boinc    508878 May 25 12:34 input.tar.gz
[2025-05-25 12:37:44] -rw-------. 1 boinc boinc    112640 May 25 12:37 result.tar.gz
12:37:46 (3207696): run_atlas exited; CPU time 19.923771
12:37:46 (3207696): called boinc_finish(0)

</stderr_txt>
]]>

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