Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:35:13 (1559717): wrapper (7.7.26015): starting
15:35:13 (1559717): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 15:35:13] Arguments: --nthreads 8
[2025-05-25 15:35:13] Threads: 8
[2025-05-25 15:35:13] Checking for CVMFS
[2025-05-25 15:35:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 15:35:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 15:35:14] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 15:35:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 15:35:14] 2.12.6.0 4868 23340 367104 146412 2 771 22289789 32935937 29998 16776704 0 200054480 99.671 174424711 21945 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 15:35:14] CVMFS is ok
[2025-05-25 15:35:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 15:35:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 15:35:14] Further information can be found at the LHC@home message board.
[2025-05-25 15:35:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 15:35:14] Checking for apptainer binary...
[2025-05-25 15:35:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 15:35:14] Running /usr/bin/apptainer --version
[2025-05-25 15:35:14] apptainer version 1.4.1-1.el9
[2025-05-25 15:35:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 15:35:14] c7-3-34.aglt2.org
[2025-05-25 15:35:14] apptainer works
[2025-05-25 15:35:14] Set ATHENA_PROC_NUMBER=8
[2025-05-25 15:35:14] Set ATHENA_CORE_NUMBER=8
[2025-05-25 15:35:14] Starting ATLAS job with PandaID=6665726200
[2025-05-25 15:35:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 20:41:19]  *** The last 200 lines of the pilot log: ***
[2025-05-25 20:41:19] 2025-05-26 00:41:02,855 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 20:41:19] 2025-05-26 00:41:02,855 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 20:41:19] 2025-05-26 00:41:02,855 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 20:41:19] 2025-05-26 00:41:02,877 | INFO     | fitting pss+swap vs Time
[2025-05-25 20:41:19] 2025-05-26 00:41:02,877 | INFO     | sum of square deviations: 8372106600.519995
[2025-05-25 20:41:19] 2025-05-26 00:41:02,930 | INFO     | sum of deviations: 32425698955.559937
[2025-05-25 20:41:19] 2025-05-26 00:41:02,930 | INFO     | mean x: 1748210903.54
[2025-05-25 20:41:19] 2025-05-26 00:41:02,931 | INFO     | mean y: 2117590.953333333
[2025-05-25 20:41:19] 2025-05-26 00:41:02,931 | INFO     | -- intersect: -6768813928.897909
[2025-05-25 20:41:19] 2025-05-26 00:41:02,931 | INFO     | intersect: -6768813928.897909
[2025-05-25 20:41:19] 2025-05-26 00:41:02,931 | INFO     | chi2: 3.09239698171095
[2025-05-25 20:41:19] 2025-05-26 00:41:02,931 | INFO     | sum of square deviations: 7960437425.511844
[2025-05-25 20:41:19] 2025-05-26 00:41:02,957 | INFO     | sum of deviations: 53915190516.53215
[2025-05-25 20:41:19] 2025-05-26 00:41:02,957 | INFO     | mean x: 1748210751.040678
[2025-05-25 20:41:19] 2025-05-26 00:41:02,957 | INFO     | mean y: 2125465.5389830507
[2025-05-25 20:41:19] 2025-05-26 00:41:02,957 | INFO     | -- intersect: -11838318804.939968
[2025-05-25 20:41:19] 2025-05-26 00:41:02,957 | INFO     | intersect: -11838318804.939968
[2025-05-25 20:41:19] 2025-05-26 00:41:02,958 | INFO     | chi2: 2.3009831546374233
[2025-05-25 20:41:19] 2025-05-26 00:41:02,958 | INFO     | current chi2=2.3009831546374233 (change=25.59224548963491 %)
[2025-05-25 20:41:19] 2025-05-26 00:41:02,958 | INFO     | sum of square deviations: 7562489438.003427
[2025-05-25 20:41:19] 2025-05-26 00:41:02,984 | INFO     | sum of deviations: 52822475543.1448
[2025-05-25 20:41:19] 2025-05-26 00:41:02,984 | INFO     | mean x: 1748210598.5413792
[2025-05-25 20:41:19] 2025-05-26 00:41:02,984 | INFO     | mean y: 2125044.7379310345
[2025-05-25 20:41:19] 2025-05-26 00:41:02,984 | INFO     | -- intersect: -12208776185.96825
[2025-05-25 20:41:19] 2025-05-26 00:41:02,984 | INFO     | intersect: -12208776185.96825
[2025-05-25 20:41:19] 2025-05-26 00:41:02,985 | INFO     | chi2: 2.3004086000296553
[2025-05-25 20:41:19] 2025-05-26 00:41:02,985 | INFO     | current chi2=2.3004086000296553 (change=0.024969961497112423 %)
[2025-05-25 20:41:19] 2025-05-26 00:41:02,985 | INFO     | right removable region: 289
[2025-05-25 20:41:19] 2025-05-26 00:41:02,985 | INFO     | sum of square deviations: 7960430105.511844
[2025-05-25 20:41:19] 2025-05-26 00:41:02,987 | INFO     | sum of deviations: -24573347744.169487
[2025-05-25 20:41:19] 2025-05-26 00:41:02,987 | INFO     | mean x: 1748211056.040678
[2025-05-25 20:41:19] 2025-05-26 00:41:02,987 | INFO     | mean y: 2138618.8474576273
[2025-05-25 20:41:19] 2025-05-26 00:41:02,987 | INFO     | -- intersect: 5398756344.38267
[2025-05-25 20:41:19] 2025-05-26 00:41:02,987 | INFO     | intersect: 5398756344.38267
[2025-05-25 20:41:19] 2025-05-26 00:41:03,005 | INFO     | chi2: 0.9635788448030156
[2025-05-25 20:41:19] 2025-05-26 00:41:03,005 | INFO     | current chi2=0.9635788448030156 (change=68.8403898172902 %)
[2025-05-25 20:41:19] 2025-05-26 00:41:03,004 | INFO     | monitor loop #1110: job 0:6665726200 is in state 'finished'
[2025-05-25 20:41:19] 2025-05-26 00:41:03,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 20:41:19] 2025-05-26 00:41:03,005 | INFO     | sum of square deviations: 7562474798.003427
[2025-05-25 20:41:19] 2025-05-26 00:41:03,007 | INFO     | sum of deviations: -25021521179.503452
[2025-05-25 20:41:19] 2025-05-26 00:41:03,007 | INFO     | mean x: 1748211208.5413792
[2025-05-25 20:41:19] 2025-05-26 00:41:03,008 | INFO     | mean y: 2138778.95862069
[2025-05-25 20:41:19] 2025-05-26 00:41:03,008 | INFO     | -- intersect: 5786343678.697531
[2025-05-25 20:41:19] 2025-05-26 00:41:03,008 | INFO     | intersect: 5786343678.697531
[2025-05-25 20:41:19] 2025-05-26 00:41:03,008 | INFO     | chi2: 0.9491183264251608
[2025-05-25 20:41:19] 2025-05-26 00:41:03,008 | INFO     | current chi2=0.9491183264251608 (change=1.5007094080413257 %)
[2025-05-25 20:41:19] 2025-05-26 00:41:03,008 | INFO     | left removable region: 20
[2025-05-25 20:41:19] 2025-05-26 00:41:03,008 | INFO     | sum of square deviations: 6035665507.4646635
[2025-05-25 20:41:19] 2025-05-26 00:41:03,010 | INFO     | sum of deviations: 1262416925.4089217
[2025-05-25 20:41:19] 2025-05-26 00:41:03,010 | INFO     | mean x: 1748211178.0446095
[2025-05-25 20:41:19] 2025-05-26 00:41:03,010 | INFO     | mean y: 2144694.7992565054
[2025-05-25 20:41:19] 2025-05-26 00:41:03,010 | INFO     | -- intersect: -363510323.29660934
[2025-05-25 20:41:19] 2025-05-26 00:41:03,010 | INFO     | intersect: -363510323.29660934
[2025-05-25 20:41:19] 2025-05-26 00:41:03,011 | INFO     | chi2: 0.12610316049185305
[2025-05-25 20:41:19] 2025-05-26 00:41:03,011 | INFO     | -- intersect: -363510323.29660934
[2025-05-25 20:41:19] 2025-05-26 00:41:03,011 | INFO     | current memory leak: 0.21 B/s (using 269 data points, chi2=0.13)
[2025-05-25 20:41:19] 2025-05-26 00:41:03,012 | INFO     | ..............................
[2025-05-25 20:41:19] 2025-05-26 00:41:03,012 | INFO     | . Timing measurements:
[2025-05-25 20:41:19] 2025-05-26 00:41:03,012 | INFO     | . get job = 0 s
[2025-05-25 20:41:19] 2025-05-26 00:41:03,012 | INFO     | . initial setup = 5 s
[2025-05-25 20:41:19] 2025-05-26 00:41:03,012 | INFO     | . payload setup = 13 s
[2025-05-25 20:41:19] 2025-05-26 00:41:03,012 | INFO     | . stage-in = 0 s
[2025-05-25 20:41:19] 2025-05-26 00:41:03,012 | INFO     | . payload execution = 18257 s
[2025-05-25 20:41:19] 2025-05-26 00:41:03,012 | INFO     | . stage-out = 3 s
[2025-05-25 20:41:19] 2025-05-26 00:41:03,012 | INFO     | . log creation = 0 s
[2025-05-25 20:41:19] 2025-05-26 00:41:03,012 | INFO     | ..............................
[2025-05-25 20:41:19] 2025-05-26 00:41:03,507 | INFO     | 
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | job summary report
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | --------------------------------------------------
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | PanDA job id: 6665726200
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | task id: 44871837
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | errors: (none)
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | pilot state: finished 
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | transexitcode: 0
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | exeerrorcode: 0
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | exeerrordiag: 
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | exitcode: 0
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | exitmsg: OK
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | cpuconsumptiontime: 40673 s
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | nevents: 400
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | neventsw: 0
[2025-05-25 20:41:19] 2025-05-26 00:41:03,508 | INFO     | pid: 1573848
[2025-05-25 20:41:19] 2025-05-26 00:41:03,509 | INFO     | pgrp: 1573848
[2025-05-25 20:41:19] 2025-05-26 00:41:03,509 | INFO     | corecount: 8
[2025-05-25 20:41:19] 2025-05-26 00:41:03,509 | INFO     | event service: False
[2025-05-25 20:41:19] 2025-05-26 00:41:03,509 | INFO     | sizes: {0: 2393740, 10: 2393946, 11: 2393974, 18275: 2426012, 18278: 2434953, 18279: 2435009, 18302: 2435307}
[2025-05-25 20:41:19] 2025-05-26 00:41:03,509 | INFO     | --------------------------------------------------
[2025-05-25 20:41:19] 2025-05-26 00:41:03,509 | INFO     | 
[2025-05-25 20:41:19] 2025-05-26 00:41:03,509 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-25 20:41:19] 2025-05-26 00:41:03,660 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,660 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,660 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,660 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,661 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,661 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 20:41:19] 2025-05-26 00:41:03,661 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,661 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 20:41:19] 2025-05-26 00:41:03,661 | INFO     | job 6665726200 has completed (purged errors)
[2025-05-25 20:41:19] 2025-05-26 00:41:03,661 | INFO     | overall cleanup function is called
[2025-05-25 20:41:19] 2025-05-26 00:41:04,568 | INFO     | PID=1564317 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 20:41:19] 2025-05-26 00:41:04,568 | INFO     | .. there are 37 such processes running
[2025-05-25 20:41:19] 2025-05-26 00:41:04,689 | INFO     | --- collectZombieJob: --- 10, [1573848]
[2025-05-25 20:41:19] 2025-05-26 00:41:04,690 | INFO     | zombie collector waiting for pid 1573848
[2025-05-25 20:41:19] 2025-05-26 00:41:04,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 20:41:19] 2025-05-26 00:41:04,690 | INFO     | collected zombie processes
[2025-05-25 20:41:19] 2025-05-26 00:41:04,690 | INFO     | will attempt to kill all subprocesses of pid=1573848
[2025-05-25 20:41:19] 2025-05-26 00:41:05,431 | INFO     | process IDs to be killed: [1573848] (in reverse order)
[2025-05-25 20:41:19] 2025-05-26 00:41:05,640 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 20:41:19] 2025-05-26 00:41:05,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 20:41:19] 2025-05-26 00:41:05,660 | INFO     | did not find any defunct processes belonging to 1573848
[2025-05-25 20:41:19] 2025-05-26 00:41:05,682 | INFO     | did not find any defunct processes belonging to 1573848
[2025-05-25 20:41:19] 2025-05-26 00:41:05,683 | INFO     | ready for new job
[2025-05-25 20:41:19] 2025-05-26 00:41:05,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 20:41:19] 2025-05-26 00:41:05,685 | INFO     | **************************************
[2025-05-25 20:41:19] 2025-05-26 00:41:05,685 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 20:41:19] 2025-05-26 00:41:05,685 | INFO     | **************************************
[2025-05-25 20:41:19] 2025-05-26 00:41:05,685 | INFO     | 
[2025-05-25 20:41:19] 2025-05-26 00:41:05,717 | INFO     | architecture information:
[2025-05-25 20:41:19] 2025-05-26 00:41:05,717 | INFO     | executing command: cat /etc/os-release
[2025-05-25 20:41:19] 2025-05-26 00:41:05,750 | INFO     | cat /etc/os-release:
[2025-05-25 20:41:19] NAME="CentOS Linux"
[2025-05-25 20:41:19] VERSION="7 (Core)"
[2025-05-25 20:41:19] ID="centos"
[2025-05-25 20:41:19] ID_LIKE="rhel fedora"
[2025-05-25 20:41:19] VERSION_ID="7"
[2025-05-25 20:41:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 20:41:19] ANSI_COLOR="0;31"
[2025-05-25 20:41:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 20:41:19] HOME_URL="https://www.centos.org/"
[2025-05-25 20:41:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 20:41:19] 
[2025-05-25 20:41:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 20:41:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 20:41:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 20:41:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 20:41:19] 
[2025-05-25 20:41:19] 2025-05-26 00:41:05,750 | INFO     | **************************************
[2025-05-25 20:41:19] 2025-05-26 00:41:06,267 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-25 20:41:19] 2025-05-26 00:41:06,297 | INFO     | sufficient remaining disk space (74054631424 B)
[2025-05-25 20:41:19] 2025-05-26 00:41:06,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 20:41:19] 2025-05-26 00:41:06,298 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 20:41:19] 2025-05-26 00:41:06,298 | INFO     | update_server=False
[2025-05-25 20:41:19] 2025-05-26 00:41:06,298 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 20:41:19] 2025-05-26 00:41:06,377 | INFO     | all data control threads have been joined
[2025-05-25 20:41:19] 2025-05-26 00:41:06,570 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 20:41:19] 2025-05-26 00:41:06,570 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 20:41:19] 2025-05-26 00:41:06,570 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 20:41:19] 2025-05-26 00:41:06,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 20:41:19] 2025-05-26 00:41:06,587 | INFO     | aborting loop
[2025-05-25 20:41:19] 2025-05-26 00:41:07,173 | INFO     | all job control threads have been joined
[2025-05-25 20:41:19] 2025-05-26 00:41:07,303 | INFO     | [job] retrieve thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:07,318 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:07,387 | INFO     | [data] control thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:07,418 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:07,594 | INFO     | [job] job monitor thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:07,638 | INFO     | [payload] validate_post thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:07,639 | INFO     | [payload] failed_post thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:07,642 | INFO     | all payload control threads have been joined
[2025-05-25 20:41:19] 2025-05-26 00:41:07,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 20:41:19] 2025-05-26 00:41:07,776 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:07,980 | INFO     | [job] validate thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:08,188 | INFO     | [job] control thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:08,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 20:41:19] 2025-05-26 00:41:08,385 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:08,420 | INFO     | [data] copytool_in thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:08,495 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 20:41:19] 2025-05-26 00:41:08,655 | INFO     | [payload] control thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:09,217 | INFO     | [job] queue monitor thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:09,708 | INFO     | [data] copytool_out thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:12,506 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 20:41:19] 2025-05-26 00:41:12,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139622407866176)>', '<ExcThread(monitor, started 139621929314048)>']
[2025-05-25 20:41:19] 2025-05-26 00:41:13,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 20:41:19] 2025-05-26 00:41:13,639 | INFO     | [monitor] control thread has ended
[2025-05-25 20:41:19] 2025-05-26 00:41:17,779 | INFO     | all workflow threads have been joined
[2025-05-25 20:41:19] 2025-05-26 00:41:17,780 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 20:41:19] 2025-05-26 00:41:17,780 | INFO     | traces error code: 0
[2025-05-25 20:41:19] 2025-05-26 00:41:17,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 20:41:19] 2025-05-26 00:41:17,933 [wrapper] ==== pilot stdout END ====
[2025-05-25 20:41:19] 2025-05-26 00:41:17,938 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 20:41:19] 2025-05-26 00:41:17,949 [wrapper] pilotpid: 1564317
[2025-05-25 20:41:19] 2025-05-26 00:41:17,974 [wrapper] Pilot exit status: 0
[2025-05-25 20:41:19] 2025-05-26 00:41:18,055 [wrapper] pandaids: 6665726200
[2025-05-25 20:41:19] 2025-05-26 00:41:18,964 [wrapper] cleanup supervisor_pilot  878328 1564318
[2025-05-25 20:41:19] 2025-05-26 00:41:18,967 [wrapper] Test setup, not cleaning
[2025-05-25 20:41:19] 2025-05-26 00:41:18,971 [wrapper] apfmon messages muted
[2025-05-25 20:41:19] 2025-05-26 00:41:18,974 [wrapper] ==== wrapper stdout END ====
[2025-05-25 20:41:19] 2025-05-26 00:41:19,033 [wrapper] ==== wrapper stderr END ====
[2025-05-25 20:41:19]  *** Error codes and diagnostics ***
[2025-05-25 20:41:19]     "exeErrorCode": 0,
[2025-05-25 20:41:19]     "exeErrorDiag": "",
[2025-05-25 20:41:19]     "pilotErrorCode": 0,
[2025-05-25 20:41:19]     "pilotErrorDiag": "",
[2025-05-25 20:41:19]  *** Listing of results directory ***
[2025-05-25 20:41:19] total 427472
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas    495897 May 25 06:45 pilot3.tar.gz
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas      5111 May 25 07:03 queuedata.json
[2025-05-25 20:41:19] -rwx------. 1 boincer umatlas     37140 May 25 07:05 runpilot2-wrapper.sh
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas       100 May 25 15:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 20:41:19] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 15:35 run_atlas
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas       105 May 25 15:35 job.xml
[2025-05-25 20:41:19] -rw-r--r--. 2 boincer umatlas 224406142 May 25 15:35 EVNT.44871834._001335.pool.root.1
[2025-05-25 20:41:19] -rw-r--r--. 2 boincer umatlas     15093 May 25 15:35 start_atlas.sh
[2025-05-25 20:41:19] drwxrwx--x. 2 boincer umatlas      4096 May 25 15:35 shared
[2025-05-25 20:41:19] -rw-r--r--. 2 boincer umatlas    508877 May 25 15:35 input.tar.gz
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas         0 May 25 15:35 boinc_lockfile
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas      2558 May 25 15:35 pandaJob.out
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas    990803 May 25 15:35 agis_schedconf.cvmfs.json
[2025-05-25 20:41:19] drwx------. 4 boincer umatlas      4096 May 25 15:35 pilot3
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas 205686914 May 25 20:39 HITS.44871837._033479.pool.root.1
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas       530 May 25 20:40 boinc_task_state.xml
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas      1051 May 25 20:40 memory_monitor_summary.json
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas        95 May 25 20:40 pilot_heartbeat.json
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas   1596740 May 25 20:40 agis_ddmendpoints.agis.ALL.json
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas    420454 May 25 20:40 log.44871837._033479.job.log.tgz.1
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas      6933 May 25 20:41 init_data.xml
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas      7721 May 25 20:41 heartbeat.json
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas      4353 May 25 20:41 pilotlog.txt
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas      8192 May 25 20:41 boinc_mmap_file
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas   1480967 May 25 20:41 log.44871837._033479.job.log.1
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas       357 May 25 20:41 output.list
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas       620 May 25 20:41 runtime_log
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas   1925120 May 25 20:41 result.tar.gz
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas      8655 May 25 20:41 runtime_log.err
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas       657 May 25 20:41 QPjNDmeLOd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvzTKDmzTNd4n.diag
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas        28 May 25 20:41 wrapper_checkpoint.txt
[2025-05-25 20:41:19] -rw-r--r--. 1 boincer umatlas     20998 May 25 20:41 stderr.txt
[2025-05-25 20:41:19] HITS file was successfully produced:
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas 205686914 May 25 20:39 shared/HITS.pool.root.1
[2025-05-25 20:41:19]  *** Contents of shared directory: ***
[2025-05-25 20:41:19] total 422420
[2025-05-25 20:41:19] -rw-r--r--. 2 boincer umatlas 224406142 May 25 15:35 ATLAS.root_0
[2025-05-25 20:41:19] -rw-r--r--. 2 boincer umatlas     15093 May 25 15:35 start_atlas.sh
[2025-05-25 20:41:19] -rw-r--r--. 2 boincer umatlas    508877 May 25 15:35 input.tar.gz
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas 205686914 May 25 20:39 HITS.pool.root.1
[2025-05-25 20:41:19] -rw-------. 1 boincer umatlas   1925120 May 25 20:41 result.tar.gz
20:41:21 (1559717): run_atlas exited; CPU time 41438.707826
20:41:21 (1559717): called boinc_finish(0)

</stderr_txt>
]]>

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