Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:21:54 (1035180): wrapper (7.7.26015): starting
15:21:54 (1035180): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 15:21:54] Arguments: --nthreads 8
[2025-05-25 15:21:54] Threads: 8
[2025-05-25 15:21:54] Checking for CVMFS
[2025-05-25 15:21:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 15:21:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 15:21:55] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 15:21:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 15:21:56] 2.12.6.0 1594372 9527 350584 146412 0 491 24912148 32935936 32221 16776704 0 63665699 99.520 76232191 23072 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 15:21:56] CVMFS is ok
[2025-05-25 15:21:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 15:21:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 15:21:56] Further information can be found at the LHC@home message board.
[2025-05-25 15:21:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 15:21:56] Checking for apptainer binary...
[2025-05-25 15:21:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 15:21:56] Running /usr/bin/apptainer --version
[2025-05-25 15:21:56] apptainer version 1.4.1-1.el9
[2025-05-25 15:21:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 15:21:56] c7-4-31.aglt2.org
[2025-05-25 15:21:56] apptainer works
[2025-05-25 15:21:56] Set ATHENA_PROC_NUMBER=8
[2025-05-25 15:21:56] Set ATHENA_CORE_NUMBER=8
[2025-05-25 15:21:56] Starting ATLAS job with PandaID=6665730159
[2025-05-25 15:21:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 17:53:44]  *** The last 200 lines of the pilot log: ***
[2025-05-25 17:53:44] 2025-05-25 21:53:22,832 | INFO     | extracted standard info from prmon json
[2025-05-25 17:53:44] 2025-05-25 21:53:22,832 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 17:53:44] 2025-05-25 21:53:22,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 17:53:44] 2025-05-25 21:53:22,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 17:53:44] 2025-05-25 21:53:22,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 17:53:44] 2025-05-25 21:53:22,835 | INFO     | fitting pss+swap vs Time
[2025-05-25 17:53:44] 2025-05-25 21:53:22,835 | INFO     | sum of square deviations: 965113695.8356174
[2025-05-25 17:53:44] 2025-05-25 21:53:22,844 | INFO     | sum of deviations: -19891259856.849327
[2025-05-25 17:53:44] 2025-05-25 21:53:22,844 | INFO     | mean x: 1748205502.7945206
[2025-05-25 17:53:44] 2025-05-25 21:53:22,844 | INFO     | mean y: 2267666.9383561644
[2025-05-25 17:53:44] 2025-05-25 21:53:22,844 | INFO     | -- intersect: 36033265972.429825
[2025-05-25 17:53:44] 2025-05-25 21:53:22,844 | INFO     | intersect: 36033265972.429825
[2025-05-25 17:53:44] 2025-05-25 21:53:22,844 | INFO     | chi2: 3.0849120761404567
[2025-05-25 17:53:44] 2025-05-25 21:53:22,844 | INFO     | sum of square deviations: 869338967.8865272
[2025-05-25 17:53:44] 2025-05-25 21:53:22,845 | INFO     | sum of deviations: -9881145325.106384
[2025-05-25 17:53:44] 2025-05-25 21:53:22,845 | INFO     | mean x: 1748205350.3049645
[2025-05-25 17:53:44] 2025-05-25 21:53:22,845 | INFO     | mean y: 2283206.723404255
[2025-05-25 17:53:44] 2025-05-25 21:53:22,845 | INFO     | -- intersect: 19872865065.59004
[2025-05-25 17:53:44] 2025-05-25 21:53:22,845 | INFO     | intersect: 19872865065.59004
[2025-05-25 17:53:44] 2025-05-25 21:53:22,845 | INFO     | chi2: 2.2798650877165816
[2025-05-25 17:53:44] 2025-05-25 21:53:22,846 | INFO     | current chi2=2.2798650877165816 (change=26.096270122261377 %)
[2025-05-25 17:53:44] 2025-05-25 21:53:22,846 | INFO     | sum of square deviations: 780087852.8161771
[2025-05-25 17:53:44] 2025-05-25 21:53:22,846 | INFO     | sum of deviations: -8680666443.999998
[2025-05-25 17:53:44] 2025-05-25 21:53:22,846 | INFO     | mean x: 1748205197.7867646
[2025-05-25 17:53:44] 2025-05-25 21:53:22,846 | INFO     | mean y: 2285272.0
[2025-05-25 17:53:44] 2025-05-25 21:53:22,846 | INFO     | -- intersect: 19455973908.31053
[2025-05-25 17:53:44] 2025-05-25 21:53:22,846 | INFO     | intersect: 19455973908.31053
[2025-05-25 17:53:44] 2025-05-25 21:53:22,847 | INFO     | chi2: 2.2804754499203046
[2025-05-25 17:53:44] 2025-05-25 21:53:22,847 | INFO     | current chi2=2.2804754499203046 (change=-0.02677185623884119 %)
[2025-05-25 17:53:44] 2025-05-25 21:53:22,847 | INFO     | right removable region: 135
[2025-05-25 17:53:44] 2025-05-25 21:53:22,847 | INFO     | sum of square deviations: 869312737.8865272
[2025-05-25 17:53:44] 2025-05-25 21:53:22,863 | INFO     | sum of deviations: -45107679035.021286
[2025-05-25 17:53:44] 2025-05-25 21:53:22,863 | INFO     | mean x: 1748205655.3049645
[2025-05-25 17:53:44] 2025-05-25 21:53:22,863 | INFO     | mean y: 2307314.744680851
[2025-05-25 17:53:44] 2025-05-25 21:53:22,863 | INFO     | -- intersect: 90714770332.8568
[2025-05-25 17:53:44] 2025-05-25 21:53:22,863 | INFO     | intersect: 90714770332.8568
[2025-05-25 17:53:44] 2025-05-25 21:53:22,863 | INFO     | chi2: 1.1097754342269068
[2025-05-25 17:53:44] 2025-05-25 21:53:22,863 | INFO     | current chi2=1.1097754342269068 (change=64.02570294271239 %)
[2025-05-25 17:53:44] 2025-05-25 21:53:22,864 | INFO     | sum of square deviations: 780078643.0294125
[2025-05-25 17:53:44] 2025-05-25 21:53:22,906 | INFO     | sum of deviations: -44326166158.83824
[2025-05-25 17:53:44] 2025-05-25 21:53:22,906 | INFO     | mean x: 1748205807.8088236
[2025-05-25 17:53:44] 2025-05-25 21:53:22,906 | INFO     | mean y: 2305919.6985294116
[2025-05-25 17:53:44] 2025-05-25 21:53:22,906 | INFO     | -- intersect: 99340060913.02191
[2025-05-25 17:53:44] 2025-05-25 21:53:22,906 | INFO     | intersect: 99340060913.02191
[2025-05-25 17:53:44] 2025-05-25 21:53:22,906 | INFO     | chi2: 1.0808218113059889
[2025-05-25 17:53:44] 2025-05-25 21:53:22,906 | INFO     | current chi2=1.0808218113059889 (change=2.6089623204795185 %)
[2025-05-25 17:53:44] 2025-05-25 21:53:22,906 | INFO     | left removable region: 20
[2025-05-25 17:53:44] 2025-05-25 21:53:22,907 | INFO     | sum of square deviations: 471647633.0956513
[2025-05-25 17:53:44] 2025-05-25 21:53:22,907 | INFO     | sum of deviations: -25785393222.608707
[2025-05-25 17:53:44] 2025-05-25 21:53:22,907 | INFO     | mean x: 1748205777.3217392
[2025-05-25 17:53:44] 2025-05-25 21:53:22,907 | INFO     | mean y: 2315373.0434782607
[2025-05-25 17:53:44] 2025-05-25 21:53:22,907 | INFO     | -- intersect: 95578271317.96686
[2025-05-25 17:53:44] 2025-05-25 21:53:22,907 | INFO     | intersect: 95578271317.96686
[2025-05-25 17:53:44] 2025-05-25 21:53:22,908 | INFO     | chi2: 0.20696811135005672
[2025-05-25 17:53:44] 2025-05-25 21:53:22,908 | INFO     | -- intersect: 95578271317.96686
[2025-05-25 17:53:44] 2025-05-25 21:53:22,908 | INFO     | current memory leak: -54.67 B/s (using 115 data points, chi2=0.21)
[2025-05-25 17:53:44] 2025-05-25 21:53:22,908 | INFO     | ..............................
[2025-05-25 17:53:44] 2025-05-25 21:53:22,908 | INFO     | . Timing measurements:
[2025-05-25 17:53:44] 2025-05-25 21:53:22,908 | INFO     | . get job = 0 s
[2025-05-25 17:53:44] 2025-05-25 21:53:22,908 | INFO     | . initial setup = 8 s
[2025-05-25 17:53:44] 2025-05-25 21:53:22,908 | INFO     | . payload setup = 36 s
[2025-05-25 17:53:44] 2025-05-25 21:53:22,908 | INFO     | . stage-in = 0 s
[2025-05-25 17:53:44] 2025-05-25 21:53:22,908 | INFO     | . payload execution = 8908 s
[2025-05-25 17:53:44] 2025-05-25 21:53:22,909 | INFO     | . stage-out = 2 s
[2025-05-25 17:53:44] 2025-05-25 21:53:22,909 | INFO     | . log creation = 0 s
[2025-05-25 17:53:44] 2025-05-25 21:53:22,909 | INFO     | ..............................
[2025-05-25 17:53:44] 2025-05-25 21:53:23,764 | INFO     | 
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | job summary report
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | --------------------------------------------------
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | PanDA job id: 6665730159
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | task id: 44871837
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | errors: (none)
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | pilot state: finished 
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | transexitcode: 0
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | exeerrorcode: 0
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | exeerrordiag: 
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | exitcode: 0
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | exitmsg: OK
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | cpuconsumptiontime: 41121 s
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | nevents: 400
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | neventsw: 0
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | pid: 1054262
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | pgrp: 1054262
[2025-05-25 17:53:44] 2025-05-25 21:53:23,765 | INFO     | corecount: 8
[2025-05-25 17:53:44] 2025-05-25 21:53:23,766 | INFO     | event service: False
[2025-05-25 17:53:44] 2025-05-25 21:53:23,766 | INFO     | sizes: {0: 2392907, 1: 2393592, 2: 2393791, 13: 2393791, 24: 2393847, 27: 2394081, 35: 2394237, 8949: 2422217, 8950: 2422216, 8953: 2431213, 8955: 2431269, 8976: 2
[2025-05-25 17:53:44] 2025-05-25 21:53:23,766 | INFO     | --------------------------------------------------
[2025-05-25 17:53:44] 2025-05-25 21:53:23,766 | INFO     | 
[2025-05-25 17:53:44] 2025-05-25 21:53:23,766 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-25 17:53:44] 2025-05-25 21:53:23,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,919 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,919 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,919 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 17:53:44] 2025-05-25 21:53:23,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,921 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 17:53:44] 2025-05-25 21:53:23,921 | INFO     | job 6665730159 has completed (purged errors)
[2025-05-25 17:53:44] 2025-05-25 21:53:23,921 | INFO     | overall cleanup function is called
[2025-05-25 17:53:44] 2025-05-25 21:53:24,955 | INFO     | --- collectZombieJob: --- 10, [1054262]
[2025-05-25 17:53:44] 2025-05-25 21:53:24,955 | INFO     | zombie collector waiting for pid 1054262
[2025-05-25 17:53:44] 2025-05-25 21:53:24,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 17:53:44] 2025-05-25 21:53:24,955 | INFO     | collected zombie processes
[2025-05-25 17:53:44] 2025-05-25 21:53:24,955 | INFO     | will attempt to kill all subprocesses of pid=1054262
[2025-05-25 17:53:44] 2025-05-25 21:53:25,425 | INFO     | PID=1041081 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 17:53:44] 2025-05-25 21:53:25,425 | INFO     | .. there are 37 such processes running
[2025-05-25 17:53:44] 2025-05-25 21:53:27,451 | INFO     | process IDs to be killed: [1054262] (in reverse order)
[2025-05-25 17:53:44] 2025-05-25 21:53:28,086 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 17:53:44] 2025-05-25 21:53:28,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 17:53:44] 2025-05-25 21:53:28,164 | INFO     | did not find any defunct processes belonging to 1054262
[2025-05-25 17:53:44] 2025-05-25 21:53:28,290 | INFO     | did not find any defunct processes belonging to 1054262
[2025-05-25 17:53:44] 2025-05-25 21:53:28,291 | INFO     | ready for new job
[2025-05-25 17:53:44] 2025-05-25 21:53:28,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 17:53:44] 2025-05-25 21:53:28,314 | INFO     | **************************************
[2025-05-25 17:53:44] 2025-05-25 21:53:28,315 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 17:53:44] 2025-05-25 21:53:28,315 | INFO     | **************************************
[2025-05-25 17:53:44] 2025-05-25 21:53:28,315 | INFO     | 
[2025-05-25 17:53:44] 2025-05-25 21:53:28,357 | INFO     | architecture information:
[2025-05-25 17:53:44] 2025-05-25 21:53:28,363 | INFO     | executing command: cat /etc/os-release
[2025-05-25 17:53:44] 2025-05-25 21:53:28,474 | INFO     | cat /etc/os-release:
[2025-05-25 17:53:44] NAME="CentOS Linux"
[2025-05-25 17:53:44] VERSION="7 (Core)"
[2025-05-25 17:53:44] ID="centos"
[2025-05-25 17:53:44] ID_LIKE="rhel fedora"
[2025-05-25 17:53:44] VERSION_ID="7"
[2025-05-25 17:53:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 17:53:44] ANSI_COLOR="0;31"
[2025-05-25 17:53:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 17:53:44] HOME_URL="https://www.centos.org/"
[2025-05-25 17:53:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 17:53:44] 
[2025-05-25 17:53:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 17:53:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 17:53:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 17:53:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 17:53:44] 
[2025-05-25 17:53:44] 2025-05-25 21:53:28,474 | INFO     | **************************************
[2025-05-25 17:53:44] 2025-05-25 21:53:28,978 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-25 17:53:44] 2025-05-25 21:53:29,088 | INFO     | sufficient remaining disk space (73810313216 B)
[2025-05-25 17:53:44] 2025-05-25 21:53:29,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 17:53:44] 2025-05-25 21:53:29,088 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 17:53:44] 2025-05-25 21:53:29,088 | INFO     | update_server=False
[2025-05-25 17:53:44] 2025-05-25 21:53:29,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 17:53:44] 2025-05-25 21:53:29,089 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 17:53:44] 2025-05-25 21:53:29,089 | INFO     | aborting loop
[2025-05-25 17:53:44] 2025-05-25 21:53:29,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 17:53:44] 2025-05-25 21:53:29,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 17:53:44] 2025-05-25 21:53:29,463 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 17:53:44] 2025-05-25 21:53:29,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 17:53:44] 2025-05-25 21:53:29,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 17:53:44] 2025-05-25 21:53:29,811 | INFO     | all data control threads have been joined
[2025-05-25 17:53:44] 2025-05-25 21:53:30,086 | INFO     | all payload control threads have been joined
[2025-05-25 17:53:44] 2025-05-25 21:53:30,093 | INFO     | [job] retrieve thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:30,094 | INFO     | [job] job monitor thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:30,101 | INFO     | [job] queue monitor thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:30,137 | INFO     | [payload] failed_post thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:30,169 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:30,255 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:30,430 | INFO     | all job control threads have been joined
[2025-05-25 17:53:44] 2025-05-25 21:53:30,613 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:30,817 | INFO     | [data] control thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:30,824 | INFO     | [job] validate thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:31,092 | INFO     | [payload] control thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:31,182 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:31,207 | INFO     | [payload] validate_post thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:31,251 | INFO     | [data] copytool_out thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:31,436 | INFO     | [job] control thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:31,454 | INFO     | [data] copytool_in thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:31,819 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 17:53:44] 2025-05-25 21:53:35,828 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 17:53:44] 2025-05-25 21:53:37,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335971899200)>', '<ExcThread(monitor, started 140335623689984)>']
[2025-05-25 17:53:44] 2025-05-25 21:53:38,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 17:53:44] 2025-05-25 21:53:38,533 | INFO     | [monitor] control thread has ended
[2025-05-25 17:53:44] 2025-05-25 21:53:42,847 | INFO     | all workflow threads have been joined
[2025-05-25 17:53:44] 2025-05-25 21:53:42,848 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 17:53:44] 2025-05-25 21:53:42,848 | INFO     | traces error code: 0
[2025-05-25 17:53:44] 2025-05-25 21:53:42,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 17:53:44] 2025-05-25 21:53:43,443 [wrapper] ==== pilot stdout END ====
[2025-05-25 17:53:44] 2025-05-25 21:53:43,446 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 17:53:44] 2025-05-25 21:53:43,461 [wrapper] pilotpid: 1041081
[2025-05-25 17:53:44] 2025-05-25 21:53:43,482 [wrapper] Pilot exit status: 0
[2025-05-25 17:53:44] 2025-05-25 21:53:43,755 [wrapper] pandaids: 6665730159
[2025-05-25 17:53:44] 2025-05-25 21:53:44,360 [wrapper] cleanup supervisor_pilot 2673288 1041082
[2025-05-25 17:53:44] 2025-05-25 21:53:44,362 [wrapper] Test setup, not cleaning
[2025-05-25 17:53:44] 2025-05-25 21:53:44,368 [wrapper] apfmon messages muted
[2025-05-25 17:53:44] 2025-05-25 21:53:44,426 [wrapper] ==== wrapper stdout END ====
[2025-05-25 17:53:44] 2025-05-25 21:53:44,485 [wrapper] ==== wrapper stderr END ====
[2025-05-25 17:53:44]  *** Error codes and diagnostics ***
[2025-05-25 17:53:44]     "exeErrorCode": 0,
[2025-05-25 17:53:44]     "exeErrorDiag": "",
[2025-05-25 17:53:44]     "pilotErrorCode": 0,
[2025-05-25 17:53:44]     "pilotErrorDiag": "",
[2025-05-25 17:53:44]  *** Listing of results directory ***
[2025-05-25 17:53:44] total 416796
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas    495897 May 25 09:09 pilot3.tar.gz
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas      5111 May 25 09:37 queuedata.json
[2025-05-25 17:53:44] -rwx------. 1 boincer umatlas     37140 May 25 09:38 runpilot2-wrapper.sh
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas       100 May 25 15:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 17:53:44] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 15:21 run_atlas
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas       105 May 25 15:21 job.xml
[2025-05-25 17:53:44] -rw-r--r--. 2 boincer umatlas 224211697 May 25 15:21 EVNT.44871834._001412.pool.root.1
[2025-05-25 17:53:44] -rw-r--r--. 2 boincer umatlas     15093 May 25 15:21 start_atlas.sh
[2025-05-25 17:53:44] drwxrwx--x. 2 boincer umatlas      4096 May 25 15:21 shared
[2025-05-25 17:53:44] -rw-r--r--. 2 boincer umatlas    508877 May 25 15:21 input.tar.gz
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas         0 May 25 15:21 boinc_lockfile
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas      2556 May 25 15:21 pandaJob.out
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas    990803 May 25 15:22 agis_schedconf.cvmfs.json
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas   1596740 May 25 15:22 agis_ddmendpoints.agis.ALL.json
[2025-05-25 17:53:44] drwx------. 4 boincer umatlas      4096 May 25 15:22 pilot3
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas      6933 May 25 17:49 init_data.xml
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas       529 May 25 17:51 boinc_task_state.xml
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas 196558723 May 25 17:51 HITS.44871837._035396.pool.root.1
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas      1045 May 25 17:52 memory_monitor_summary.json
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas    328133 May 25 17:53 log.44871837._035396.job.log.tgz.1
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas        95 May 25 17:53 pilot_heartbeat.json
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas      7708 May 25 17:53 heartbeat.json
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas      8192 May 25 17:53 boinc_mmap_file
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas        27 May 25 17:53 wrapper_checkpoint.txt
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas      4353 May 25 17:53 pilotlog.txt
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas    766737 May 25 17:53 log.44871837._035396.job.log.1
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas       357 May 25 17:53 output.list
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas       620 May 25 17:53 runtime_log
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas   1116160 May 25 17:53 result.tar.gz
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas       655 May 25 17:53 wjlKDmrjQd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCJUKDmyZ6mFn.diag
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas      8654 May 25 17:53 runtime_log.err
[2025-05-25 17:53:44] -rw-r--r--. 1 boincer umatlas     20996 May 25 17:53 stderr.txt
[2025-05-25 17:53:44] HITS file was successfully produced:
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas 196558723 May 25 17:51 shared/HITS.pool.root.1
[2025-05-25 17:53:44]  *** Contents of shared directory: ***
[2025-05-25 17:53:44] total 412528
[2025-05-25 17:53:44] -rw-r--r--. 2 boincer umatlas 224211697 May 25 15:21 ATLAS.root_0
[2025-05-25 17:53:44] -rw-r--r--. 2 boincer umatlas     15093 May 25 15:21 start_atlas.sh
[2025-05-25 17:53:44] -rw-r--r--. 2 boincer umatlas    508877 May 25 15:21 input.tar.gz
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas 196558723 May 25 17:51 HITS.pool.root.1
[2025-05-25 17:53:44] -rw-------. 1 boincer umatlas   1116160 May 25 17:53 result.tar.gz
17:53:46 (1035180): run_atlas exited; CPU time 41369.998116
17:53:46 (1035180): called boinc_finish(0)

</stderr_txt>
]]>

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