Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-26 02:46:23 (14232): Detected: vboxwrapper 26206
2025-05-26 02:46:23 (14232): Detected: BOINC client v7.16.20
2025-05-26 02:46:23 (14232): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-05-26 02:46:23 (14232): Successfully copied 'init_data.xml' to the shared directory.
2025-05-26 02:46:24 (14232): Create VM. (boinc_2e4850d246a938ad, slot#1)
2025-05-26 02:46:24 (14232): Setting Memory Size for VM. (4400MB)
2025-05-26 02:46:25 (14232): Setting CPU Count for VM. (4)
2025-05-26 02:46:25 (14232): Setting Chipset Options for VM.
2025-05-26 02:46:25 (14232): Setting Graphics Controller Options for VM.
2025-05-26 02:46:25 (14232): Setting Boot Options for VM.
2025-05-26 02:46:26 (14232): Setting Network Configuration for NAT.
2025-05-26 02:46:26 (14232): Enabling VM Network Access.
2025-05-26 02:46:26 (14232): Disabling USB Support for VM.
2025-05-26 02:46:26 (14232): Disabling COM Port Support for VM.
2025-05-26 02:46:27 (14232): Disabling LPT Port Support for VM.
2025-05-26 02:46:27 (14232): Disabling Audio Support for VM.
2025-05-26 02:46:27 (14232): Disabling Clipboard Support for VM.
2025-05-26 02:46:27 (14232): Disabling Drag and Drop Support for VM.
2025-05-26 02:46:28 (14232): Adding storage controller(s) to VM.
2025-05-26 02:46:28 (14232): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-26 02:46:29 (14232): Adding VirtualBox Guest Additions to VM.
2025-05-26 02:46:29 (14232): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-26 02:46:29 (14232): forwarding host port 59829 to guest port 80
2025-05-26 02:46:29 (14232): Enabling remote desktop for VM.
2025-05-26 02:46:30 (14232): Required extension pack not installed, remote desktop not enabled.
2025-05-26 02:46:30 (14232): Enabling shared directory for VM.
2025-05-26 02:46:30 (14232): Starting VM using VBoxManage interface. (boinc_2e4850d246a938ad, slot#1)
2025-05-26 02:46:33 (14232): Successfully started VM. (PID = '6912')
2025-05-26 02:46:33 (14232): Reporting VM Process ID to BOINC.
2025-05-26 02:46:33 (14232): Guest Log: BIOS: VirtualBox 6.0.14
2025-05-26 02:46:33 (14232): Guest Log: CPUID EDX: 0x178bfbff
2025-05-26 02:46:33 (14232): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-26 02:46:33 (14232): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-26 02:46:33 (14232): Detected: Web Application Enabled (http://localhost:59829)
2025-05-26 02:46:33 (14232): Preference change detected
2025-05-26 02:46:33 (14232): Setting CPU throttle for VM. (90%)
2025-05-26 02:46:34 (14232): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-26 02:46:35 (14232): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-26 02:46:35 (14232): Guest Log: BIOS: Booting from Hard Disk...
2025-05-26 02:46:38 (14232): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-26 02:46:38 (14232): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-26 02:46:38 (14232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-26 02:46:44 (14232): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-26 02:46:44 (14232): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-26 02:46:50 (14232): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-26 02:46:50 (14232): Guest Log: 00:00:00.000112 main     Log opened 2025-05-26T02:46:47.724668000Z
2025-05-26 02:46:50 (14232): Guest Log: 00:00:00.000178 main     OS Product: Linux
2025-05-26 02:46:50 (14232): Guest Log: 00:00:00.000203 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-26 02:46:50 (14232): Guest Log: 00:00:00.000225 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-26 02:46:50 (14232): Guest Log: 00:00:00.000247 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-26 02:46:50 (14232): Guest Log: 00:00:00.000247 main     Process ID: 1301
2025-05-26 02:46:50 (14232): Guest Log: 00:00:00.000248 main     Package type: LINUX_64BITS_GENERIC
2025-05-26 02:46:50 (14232): Guest Log: 00:00:00.001311 main     5.2.32 r132073 started. Verbose level = 0
2025-05-26 02:46:50 (14232): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-26 02:46:50 (14232): Guest Log: [INFO] Mounting shared directory
2025-05-26 02:46:50 (14232): Guest Log: [INFO] Checking for init_data.xml
2025-05-26 02:46:53 (14232): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-26 02:46:53 (14232): Guest Log: [INFO] Detected branch: prod
2025-05-26 02:46:53 (14232): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-26 02:46:53 (14232): Guest Log: Copying input files
2025-05-26 02:46:55 (14232): Guest Log: Copied input files into RunAtlas.
2025-05-26 02:46:55 (14232): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-26 02:46:55 (14232): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-26 02:46:55 (14232): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-26 02:46:55 (14232): Guest Log: Further information can be found at the LHC@home message board.
2025-05-26 02:47:00 (14232): Guest Log: 00:00:10.010826 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 612 084 172 000ns (GuestNow=1 748 249 219 811 215 000 ns GuestLast=1 748 227 607 727 043 000 ns fSetTimeLastLoop=true )
2025-05-26 02:47:07 (14232): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-26 02:47:07 (14232): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-26 02:47:07 (14232): Guest Log: 2.6.3.0 1582 0 30144 146430 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-26 02:47:08 (14232): Guest Log: copied the webapp to /var/www
2025-05-26 02:47:08 (14232): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-26 02:47:08 (14232): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-26 02:47:08 (14232): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-26 02:47:08 (14232): Guest Log:  *** Starting ATLAS job. (PandaID=6665733932 taskID=44871837) ***
2025-05-26 04:28:01 (14232): Status Report: Elapsed Time: '6000.936401'
2025-05-26 04:28:01 (14232): Status Report: CPU Time: '19265.828125'
2025-05-26 06:10:32 (14232): Status Report: Elapsed Time: '12001.486631'
2025-05-26 06:10:32 (14232): Status Report: CPU Time: '41172.656250'
2025-05-26 06:29:32 (14232): Guest Log:  *** Job finished ***
2025-05-26 06:29:32 (14232): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:17,737 | INFO     | [data] copytool_out thread has finished
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:18,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:22,469 | INFO     | [data] queue_monitor thread has finished
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:23,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139936630810432)>', '<ExcThread(monitor, started 139936040728320)>']
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:23,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:23,954 | INFO     | [monitor] control thread has ended
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,604 | INFO     | all workflow threads have been joined
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,604 | INFO     | end of generic workflow (traces error code: 0)
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,604 | INFO     | traces error code: 0
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,671 [wrapper] ==== pilot stdout END ====
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,674 [wrapper] ==== wrapper stdout RESUME ====
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,678 [wrapper] pilotpid: 5891
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,681 [wrapper] Pilot exit status: 0
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,901 [wrapper] pandaids: 6665733932
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,935 [wrapper] cleanup supervisor_pilot 13694 5892
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,938 [wrapper] Test setup, not cleaning
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,942 [wrapper] apfmon messages muted
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,945 [wrapper] ==== wrapper stdout END ====
2025-05-26 06:29:32 (14232): Guest Log: 2025-05-26 12:29:28,948 [wrapper] ==== wrapper stderr END ====
2025-05-26 06:29:32 (14232): Guest Log:  *** Error codes and diagnostics ***
2025-05-26 06:29:32 (14232): Guest Log:     "exeErrorCode": 0,
2025-05-26 06:29:32 (14232): Guest Log:     "exeErrorDiag": "",
2025-05-26 06:29:32 (14232): Guest Log:     "pilotErrorCode": 0,
2025-05-26 06:29:32 (14232): Guest Log:     "pilotErrorDiag": "",
2025-05-26 06:29:32 (14232): Guest Log:  *** Listing of results directory ***
2025-05-26 06:29:32 (14232): Guest Log: total 197608
2025-05-26 06:29:32 (14232): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 25 15:56 pilot3.tar.gz
2025-05-26 06:29:32 (14232): Guest Log: -rwx------. 1 atlas atlas     37140 May 25 16:01 runpilot2-wrapper.sh
2025-05-26 06:29:32 (14232): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 25 16:01 queuedata.json
2025-05-26 06:29:32 (14232): Guest Log: -rwxr-xr-x. 1 atlas atlas     11897 May 26 08:46 init_data.xml
2025-05-26 06:29:32 (14232): Guest Log: -rwxr-xr-x. 1 atlas atlas    508876 May 26 08:46 input.tar.gz
2025-05-26 06:29:32 (14232): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 26 08:46 start_atlas.sh
2025-05-26 06:29:32 (14232): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 26 08:46 EVNT.44871834._001478.pool.root.1 -> /data/./ATLAS.root_0
2025-05-26 06:29:32 (14232): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 26 08:47 pandaJob.out
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas    990083 May 26 08:48 agis_schedconf.cvmfs.json
2025-05-26 06:29:32 (14232): Guest Log: drwx------. 4 atlas atlas      4096 May 26 08:48 pilot3
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas 195781933 May 26 12:28 HITS.44871837._037049.pool.root.1
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas      1031 May 26 12:28 memory_monitor_summary.json
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas   1596740 May 26 12:28 agis_ddmendpoints.agis.ALL.json
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas    301146 May 26 12:28 log.44871837._037049.job.log.tgz.1
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas        95 May 26 12:29 pilot_heartbeat.json
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas      7723 May 26 12:29 heartbeat.json
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas      4413 May 26 12:29 pilotlog.txt
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas   1099781 May 26 12:29 log.44871837._037049.job.log.1
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas       357 May 26 12:29 output.list
2025-05-26 06:29:32 (14232): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 26 12:29 runtime_log
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas   1423360 May 26 12:29 result.tar.gz
2025-05-26 06:29:32 (14232): Guest Log: -rw-r--r--. 1 atlas atlas      8605 May 26 12:29 runtime_log.err
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas       661 May 26 12:29 4skMDmgxSd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMlOKDmsx5zDm.diag
2025-05-26 06:29:32 (14232): Guest Log: Looking for outputfile HITS.44871837._037049.pool.root.1
2025-05-26 06:29:32 (14232): Guest Log: HITS file was successfully produced
2025-05-26 06:29:32 (14232): Guest Log: -rw-------. 1 atlas atlas 195781933 May 26 12:28 /home/atlas/RunAtlas/HITS.44871837._037049.pool.root.1
2025-05-26 06:29:33 (14232): Guest Log: Successfully finished the ATLAS job!
2025-05-26 06:29:33 (14232): Guest Log: Copying the results back to the shared directory!
2025-05-26 06:29:33 (14232): Guest Log:  *** Contents of shared directory: ***
2025-05-26 06:29:33 (14232): Guest Log: total 412416
2025-05-26 06:29:33 (14232): Guest Log: -rwxrwxrwx. 1 root root 224559458 May 26 08:46 ATLAS.root_0
2025-05-26 06:29:33 (14232): Guest Log: -rwxrwxrwx. 1 root root 195781933 May 26 12:29 HITS.pool.root.1
2025-05-26 06:29:33 (14232): Guest Log: -rwxrwxrwx. 1 root root     11897 May 26 08:46 init_data.xml
2025-05-26 06:29:33 (14232): Guest Log: -rwxrwxrwx. 1 root root    508876 May 25 18:37 input.tar.gz
2025-05-26 06:29:33 (14232): Guest Log: -rwxrwxrwx. 1 root root   1423360 May 26 12:29 result.tar.gz
2025-05-26 06:29:33 (14232): Guest Log: -rwxrwxrwx. 1 root root     15093 May 25 18:37 start_atlas.sh
2025-05-26 06:29:33 (14232): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-26 06:29:33 (14232): VM Completion File Detected.
2025-05-26 06:29:33 (14232): Powering off VM.
2025-05-26 06:29:34 (14232): Successfully stopped VM.
2025-05-26 06:29:34 (14232): Deregistering VM. (boinc_2e4850d246a938ad, slot#1)
2025-05-26 06:29:34 (14232): Removing network bandwidth throttle group from VM.
2025-05-26 06:29:34 (14232): Removing VM from VirtualBox.
06:29:39 (14232): called boinc_finish(0)

</stderr_txt>
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