Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:41:44 (314294): wrapper (7.7.26015): starting
11:41:44 (314294): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 11:41:44] Arguments: --nthreads 8
[2025-05-25 11:41:44] Threads: 8
[2025-05-25 11:41:44] Checking for CVMFS
[2025-05-25 11:41:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 11:41:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 11:41:44] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 11:41:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 11:41:44] 2.11.3.0 21318 388559 239592 146411 2 446 40278500 45568001 12202 130560 0 1865124942 99.752 1574199583 20611 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-05-25 11:41:44] CVMFS is ok
[2025-05-25 11:41:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 11:41:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 11:41:44] Further information can be found at the LHC@home message board.
[2025-05-25 11:41:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 11:41:44] Checking for apptainer binary...
[2025-05-25 11:41:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 11:41:44] Running /usr/bin/apptainer --version
[2025-05-25 11:41:44] apptainer version 1.3.3-1.el9
[2025-05-25 11:41:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 11:41:45] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0024.triumf.lcg
[2025-05-25 11:41:45] apptainer works
[2025-05-25 11:41:45] Set ATHENA_PROC_NUMBER=8
[2025-05-25 11:41:45] Set ATHENA_CORE_NUMBER=8
[2025-05-25 11:41:45] Starting ATLAS job with PandaID=6665733840
[2025-05-25 11:41:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 11:44:45]  *** The last 200 lines of the pilot log: ***
[2025-05-25 11:44:45] 2025-05-25 18:44:31,300 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 11:44:45] 2025-05-25 18:44:31,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 11:44:45] 2025-05-25 18:44:31,301 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 11:44:45] 2025-05-25 18:44:31,301 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 11:44:45] 2025-05-25 18:44:31,301 | WARNING  | found no stored workdir sizes
[2025-05-25 11:44:45] 2025-05-25 18:44:31,301 | INFO     | will not add max space = 0 B to job metrics
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | WARNING  | wrong length of table data, x=[1748198536.0], y=[1067.0] (must be same and length>=4)
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | ..............................
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | . Timing measurements:
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | . get job = 0 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | . initial setup = 3 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | . payload setup = 4 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | . stage-in = 0 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | . payload execution = 15 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | . stage-out = 0 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | . log creation = 0 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | ..............................
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665733840/pilotlog.txt
[2025-05-25 11:44:45] 2025-05-25 18:44:31,312 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-25 11:44:45] - Log from pilotlog.txt -
[2025-05-25 11:44:45] 2025-05-25 18:44:31,300 | INFO     | extracted standard info from prmon json
[2025-05-25 11:44:45] 2025-05-25 18:44:31,300 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 11:44:45] 2025-05-25 18:44:31,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 11:44:45] 2025-05-25 18:44:31,301 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 11:44:45] 2025-05-25 18:44:31,301 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 11:44:45] 2025-05-25 18:44:31,301 | WARNING  | found no stored workdir sizes
[2025-05-25 11:44:45] 2025-05-25 18:44:31,301 | INFO     | will not add max space = 0 B to job metrics
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | WARNING  | wrong length of table data, x=[1748198536.0], y=[1067.0] (must be same and length>=4)
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | ..............................
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | . Timing measurements:
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | . get job = 0 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | . initial setup = 3 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | . payload setup = 4 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | . stage-in = 0 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | . payload execution = 15 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | . stage-out = 0 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | . log creation = 0 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | ..............................
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665733840/pilotlog.txt
[2025-05-25 11:44:45] 2025-05-25 18:44:31,312 | WARNING  | 
[2025-05-25 11:44:45] [begin log extracts]
[2025-05-25 11:44:45] - Log from pilotlog.txt -
[2025-05-25 11:44:45] 2025-05-25 18:44:31,300 | INFO     | extracted standard info from prmon json
[2025-05-25 11:44:45] 2025-05-25 18:44:31,300 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 11:44:45] 2025-05-25 18:44:31,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 11:44:45] 2025-05-25 18:44:31,301 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 11:44:45] 2025-05-25 18:44:31,301 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 11:44:45] 2025-05-25 18:44:31,301 | WARNING  | found no stored workdir sizes
[2025-05-25 11:44:45] 2025-05-25 18:44:31,301 | INFO     | will not add max space = 0 B to job metrics
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | WARNING  | wrong length of table data, x=[1748198536.0], y=[1067.0] (must be same and length>=4)
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | ..............................
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | . Timing measurements:
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | . get job = 0 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | . initial setup = 3 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,302 | INFO     | . payload setup = 4 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | . stage-in = 0 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | . payload execution = 15 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | . stage-out = 0 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | . log creation = 0 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | ..............................
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-25 11:44:45] 2025-05-25 18:44:31,303 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665733840/pilotlog.txt
[2025-05-25 11:44:45] [end log extracts]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,313 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-25 11:44:45] 2025-05-25 18:44:31,314 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-25 11:44:45] 2025-05-25 18:44:31,390 | INFO     | 
[2025-05-25 11:44:45] 2025-05-25 18:44:31,390 | INFO     | job summary report
[2025-05-25 11:44:45] 2025-05-25 18:44:31,390 | INFO     | --------------------------------------------------
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | PanDA job id: 6665733840
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | task id: 44871837
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-25 11:42:23,825 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | pilot state: failed 
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | transexitcode: 65
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | exeerrorcode: 65
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | exitcode: 65
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | cpuconsumptiontime: 16 s
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | nevents: 0
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | neventsw: 0
[2025-05-25 11:44:45] 2025-05-25 18:44:31,391 | INFO     | pid: 328253
[2025-05-25 11:44:45] 2025-05-25 18:44:31,392 | INFO     | pgrp: 328253
[2025-05-25 11:44:45] 2025-05-25 18:44:31,392 | INFO     | corecount: 8
[2025-05-25 11:44:45] 2025-05-25 18:44:31,392 | INFO     | event service: False
[2025-05-25 11:44:45] 2025-05-25 18:44:31,392 | INFO     | sizes: {0: 2393566, 1: 2393765, 4: 2393971, 11: 2393999, 23: 2421382, 24: 2421382, 143: 2421652}
[2025-05-25 11:44:45] 2025-05-25 18:44:31,392 | INFO     | --------------------------------------------------
[2025-05-25 11:44:45] 2025-05-25 18:44:31,392 | INFO     | 
[2025-05-25 11:44:45] 2025-05-25 18:44:31,392 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-25 11:44:45] 2025-05-25 18:44:31,408 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,408 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,408 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,408 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,409 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,409 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,409 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,409 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,409 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 11:44:45] 2025-05-25 18:44:31,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,409 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 11:44:45] 2025-05-25 18:44:31,410 | INFO     | job 6665733840 has completed (purged errors)
[2025-05-25 11:44:45] 2025-05-25 18:44:31,410 | INFO     | overall cleanup function is called
[2025-05-25 11:44:45] 2025-05-25 18:44:32,415 | INFO     | --- collectZombieJob: --- 10, [328253]
[2025-05-25 11:44:45] 2025-05-25 18:44:32,415 | INFO     | zombie collector waiting for pid 328253
[2025-05-25 11:44:45] 2025-05-25 18:44:32,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 11:44:45] 2025-05-25 18:44:32,416 | INFO     | collected zombie processes
[2025-05-25 11:44:45] 2025-05-25 18:44:32,416 | INFO     | will attempt to kill all subprocesses of pid=328253
[2025-05-25 11:44:45] 2025-05-25 18:44:32,589 | INFO     | process IDs to be killed: [328253] (in reverse order)
[2025-05-25 11:44:45] 2025-05-25 18:44:32,644 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 11:44:45] 2025-05-25 18:44:32,644 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 11:44:45] 2025-05-25 18:44:32,651 | INFO     | did not find any defunct processes belonging to 328253
[2025-05-25 11:44:45] 2025-05-25 18:44:32,657 | INFO     | did not find any defunct processes belonging to 328253
[2025-05-25 11:44:45] 2025-05-25 18:44:32,657 | INFO     | ready for new job
[2025-05-25 11:44:45] 2025-05-25 18:44:32,657 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 11:44:45] 2025-05-25 18:44:32,659 | INFO     | **************************************
[2025-05-25 11:44:45] 2025-05-25 18:44:32,659 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 11:44:45] 2025-05-25 18:44:32,659 | INFO     | **************************************
[2025-05-25 11:44:45] 2025-05-25 18:44:32,659 | INFO     | 
[2025-05-25 11:44:45] 2025-05-25 18:44:32,672 | INFO     | architecture information:
[2025-05-25 11:44:45] 2025-05-25 18:44:32,673 | INFO     | executing command: cat /etc/os-release
[2025-05-25 11:44:45] 2025-05-25 18:44:32,684 | INFO     | cat /etc/os-release:
[2025-05-25 11:44:45] NAME="CentOS Linux"
[2025-05-25 11:44:45] VERSION="7 (Core)"
[2025-05-25 11:44:45] ID="centos"
[2025-05-25 11:44:45] ID_LIKE="rhel fedora"
[2025-05-25 11:44:45] VERSION_ID="7"
[2025-05-25 11:44:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 11:44:45] ANSI_COLOR="0;31"
[2025-05-25 11:44:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 11:44:45] HOME_URL="https://www.centos.org/"
[2025-05-25 11:44:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 11:44:45] 
[2025-05-25 11:44:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 11:44:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 11:44:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 11:44:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 11:44:45] 
[2025-05-25 11:44:45] 2025-05-25 18:44:32,684 | INFO     | **************************************
[2025-05-25 11:44:45] 2025-05-25 18:44:33,186 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-25 11:44:45] 2025-05-25 18:44:33,199 | INFO     | sufficient remaining disk space (1346075885568 B)
[2025-05-25 11:44:45] 2025-05-25 18:44:33,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 11:44:45] 2025-05-25 18:44:33,199 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 11:44:45] 2025-05-25 18:44:33,199 | INFO     | update_server=False
[2025-05-25 11:44:45] 2025-05-25 18:44:33,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 11:44:45] 2025-05-25 18:44:33,200 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 11:44:45] 2025-05-25 18:44:33,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 11:44:45] 2025-05-25 18:44:33,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 11:44:45] 2025-05-25 18:44:33,201 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 11:44:45] 2025-05-25 18:44:33,201 | INFO     | aborting loop
[2025-05-25 11:44:45] 2025-05-25 18:44:33,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 11:44:45] 2025-05-25 18:44:33,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 11:44:45] 2025-05-25 18:44:33,363 | INFO     | all payload control threads have been joined
[2025-05-25 11:44:45] 2025-05-25 18:44:33,835 | INFO     | all data control threads have been joined
[2025-05-25 11:44:45] 2025-05-25 18:44:34,200 | INFO     | all job control threads have been joined
[2025-05-25 11:44:45] 2025-05-25 18:44:34,204 | INFO     | [job] retrieve thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:34,205 | INFO     | [job] queue monitor thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:34,206 | INFO     | [job] job monitor thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:34,369 | INFO     | [payload] control thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:34,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 11:44:45] 2025-05-25 18:44:34,674 | INFO     | [job] validate thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:34,840 | INFO     | [data] control thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:34,891 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:34,989 | INFO     | [payload] validate_post thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:35,038 | INFO     | [data] copytool_in thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:35,046 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:35,120 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:35,205 | INFO     | [job] control thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:35,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 11:44:45] 2025-05-25 18:44:35,579 | INFO     | [payload] failed_post thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:35,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:36,582 | INFO     | [data] copytool_out thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:39,358 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 11:44:45] 2025-05-25 18:44:40,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040713336640)>', '<ExcThread(monitor, started 140039958820608)>']
[2025-05-25 11:44:45] 2025-05-25 18:44:41,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 11:44:45] 2025-05-25 18:44:41,242 | INFO     | [monitor] control thread has ended
[2025-05-25 11:44:45] 2025-05-25 18:44:45,555 | INFO     | all workflow threads have been joined
[2025-05-25 11:44:45] 2025-05-25 18:44:45,555 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 11:44:45] 2025-05-25 18:44:45,556 | INFO     | traces error code: 0
[2025-05-25 11:44:45] 2025-05-25 18:44:45,556 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 11:44:45] 2025-05-25 18:44:45,692 [wrapper] ==== pilot stdout END ====
[2025-05-25 11:44:45] 2025-05-25 18:44:45,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 11:44:45] 2025-05-25 18:44:45,697 [wrapper] pilotpid: 319253
[2025-05-25 11:44:45] 2025-05-25 18:44:45,699 [wrapper] Pilot exit status: 0
[2025-05-25 11:44:45] 2025-05-25 18:44:45,707 [wrapper] pandaids: 6665733840
[2025-05-25 11:44:45] 2025-05-25 18:44:45,741 [wrapper] cleanup supervisor_pilot  319261 319254
[2025-05-25 11:44:45] 2025-05-25 18:44:45,744 [wrapper] Test setup, not cleaning
[2025-05-25 11:44:45] 2025-05-25 18:44:45,746 [wrapper] apfmon messages muted
[2025-05-25 11:44:45] 2025-05-25 18:44:45,748 [wrapper] ==== wrapper stdout END ====
[2025-05-25 11:44:45] 2025-05-25 18:44:45,750 [wrapper] ==== wrapper stderr END ====
[2025-05-25 11:44:45]  *** Error codes and diagnostics ***
[2025-05-25 11:44:45]     "exeErrorCode": 65,
[2025-05-25 11:44:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-25 11:44:45]     "pilotErrorCode": 1305,
[2025-05-25 11:44:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-25 11:44:45]  *** Listing of results directory ***
[2025-05-25 11:44:45] total 224320
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc      5111 May 25 08:55 queuedata.json
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc    495897 May 25 08:56 pilot3.tar.gz
[2025-05-25 11:44:45] -rwx------. 1 boinc boinc     37140 May 25 08:56 runpilot2-wrapper.sh
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc       100 May 25 11:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 11:44:45] -rwxr-xr-x. 1 boinc boinc      7986 May 25 11:41 run_atlas
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc       105 May 25 11:41 job.xml
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc      6454 May 25 11:41 init_data.xml
[2025-05-25 11:44:45] -rw-r--r--. 2 boinc boinc 225682838 May 25 11:41 EVNT.44871834._001474.pool.root.1
[2025-05-25 11:44:45] -rw-r--r--. 2 boinc boinc     15093 May 25 11:41 start_atlas.sh
[2025-05-25 11:44:45] drwxrwx--x. 2 boinc boinc      4096 May 25 11:41 shared
[2025-05-25 11:44:45] -rw-r--r--. 2 boinc boinc    508876 May 25 11:41 input.tar.gz
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc         0 May 25 11:41 boinc_lockfile
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc      2558 May 25 11:41 pandaJob.out
[2025-05-25 11:44:45] -rw-------. 1 boinc boinc    990811 May 25 11:41 agis_schedconf.cvmfs.json
[2025-05-25 11:44:45] -rw-------. 1 boinc boinc   1596740 May 25 11:41 agis_ddmendpoints.agis.ALL.json
[2025-05-25 11:44:45] drwx------. 4 boinc boinc      4096 May 25 11:41 pilot3
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc       522 May 25 11:42 boinc_task_state.xml
[2025-05-25 11:44:45] -rw-------. 1 boinc boinc       960 May 25 11:42 memory_monitor_summary.json
[2025-05-25 11:44:45] -rw-------. 1 boinc boinc     20508 May 25 11:42 log.44871837._036957.job.log.tgz.1
[2025-05-25 11:44:45] -rw-------. 1 boinc boinc        95 May 25 11:43 pilot_heartbeat.json
[2025-05-25 11:44:45] -rw-------. 1 boinc boinc      8317 May 25 11:44 heartbeat.json
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc      8192 May 25 11:44 boinc_mmap_file
[2025-05-25 11:44:45] -rw-------. 1 boinc boinc      4475 May 25 11:44 pilotlog.txt
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc        22 May 25 11:44 wrapper_checkpoint.txt
[2025-05-25 11:44:45] -rw-------. 1 boinc boinc     72804 May 25 11:44 log.44871837._036957.job.log.1
[2025-05-25 11:44:45] -rw-------. 1 boinc boinc       188 May 25 11:44 output.list
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc       620 May 25 11:44 runtime_log
[2025-05-25 11:44:45] -rw-------. 1 boinc boinc    112640 May 25 11:44 result.tar.gz
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc      8647 May 25 11:44 runtime_log.err
[2025-05-25 11:44:45] -rw-------. 1 boinc boinc       645 May 25 11:44 6trLDmltSd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwkOKDmPQCJ1n.diag
[2025-05-25 11:44:45] -rw-r--r--. 1 boinc boinc     21632 May 25 11:44 stderr.txt
[2025-05-25 11:44:45] No HITS result produced
[2025-05-25 11:44:45]  *** Contents of shared directory: ***
[2025-05-25 11:44:45] total 221028
[2025-05-25 11:44:45] -rw-r--r--. 2 boinc boinc 225682838 May 25 11:41 ATLAS.root_0
[2025-05-25 11:44:45] -rw-r--r--. 2 boinc boinc     15093 May 25 11:41 start_atlas.sh
[2025-05-25 11:44:45] -rw-r--r--. 2 boinc boinc    508876 May 25 11:41 input.tar.gz
[2025-05-25 11:44:45] -rw-------. 1 boinc boinc    112640 May 25 11:44 result.tar.gz
11:44:47 (314294): run_atlas exited; CPU time 20.588158
11:44:47 (314294): called boinc_finish(0)

</stderr_txt>
]]>

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