Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-25 22:46:47 (23708): Detected: vboxwrapper 26206
2025-05-25 22:46:47 (23708): Detected: BOINC client v7.16.20
2025-05-25 22:46:48 (23708): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-05-25 22:46:48 (23708): Successfully copied 'init_data.xml' to the shared directory.
2025-05-25 22:46:48 (23708): Create VM. (boinc_2a7e742f16f810de, slot#1)
2025-05-25 22:46:49 (23708): Setting Memory Size for VM. (4400MB)
2025-05-25 22:46:49 (23708): Setting CPU Count for VM. (4)
2025-05-25 22:46:49 (23708): Setting Chipset Options for VM.
2025-05-25 22:46:50 (23708): Setting Graphics Controller Options for VM.
2025-05-25 22:46:50 (23708): Setting Boot Options for VM.
2025-05-25 22:46:50 (23708): Setting Network Configuration for NAT.
2025-05-25 22:46:50 (23708): Enabling VM Network Access.
2025-05-25 22:46:51 (23708): Disabling USB Support for VM.
2025-05-25 22:46:51 (23708): Disabling COM Port Support for VM.
2025-05-25 22:46:51 (23708): Disabling LPT Port Support for VM.
2025-05-25 22:46:51 (23708): Disabling Audio Support for VM.
2025-05-25 22:46:52 (23708): Disabling Clipboard Support for VM.
2025-05-25 22:46:52 (23708): Disabling Drag and Drop Support for VM.
2025-05-25 22:46:52 (23708): Adding storage controller(s) to VM.
2025-05-25 22:46:52 (23708): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-25 22:46:53 (23708): Adding VirtualBox Guest Additions to VM.
2025-05-25 22:46:53 (23708): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-25 22:46:54 (23708): forwarding host port 56279 to guest port 80
2025-05-25 22:46:54 (23708): Enabling remote desktop for VM.
2025-05-25 22:46:54 (23708): Required extension pack not installed, remote desktop not enabled.
2025-05-25 22:46:54 (23708): Enabling shared directory for VM.
2025-05-25 22:46:55 (23708): Starting VM using VBoxManage interface. (boinc_2a7e742f16f810de, slot#1)
2025-05-25 22:46:58 (23708): Successfully started VM. (PID = '23608')
2025-05-25 22:46:58 (23708): Reporting VM Process ID to BOINC.
2025-05-25 22:46:58 (23708): Guest Log: BIOS: VirtualBox 6.0.14
2025-05-25 22:46:58 (23708): Guest Log: CPUID EDX: 0x178bfbff
2025-05-25 22:46:58 (23708): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-25 22:46:58 (23708): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-25 22:46:58 (23708): Detected: Web Application Enabled (http://localhost:56279)
2025-05-25 22:46:58 (23708): Preference change detected
2025-05-25 22:46:58 (23708): Setting CPU throttle for VM. (90%)
2025-05-25 22:46:58 (23708): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-25 22:47:00 (23708): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-25 22:47:00 (23708): Guest Log: BIOS: Booting from Hard Disk...
2025-05-25 22:47:03 (23708): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-25 22:47:03 (23708): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-25 22:47:03 (23708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-25 22:47:09 (23708): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-25 22:47:09 (23708): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-25 22:47:14 (23708): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-25 22:47:14 (23708): Guest Log: 00:00:00.000155 main     Log opened 2025-05-25T22:47:12.528960000Z
2025-05-25 22:47:14 (23708): Guest Log: 00:00:00.000224 main     OS Product: Linux
2025-05-25 22:47:14 (23708): Guest Log: 00:00:00.000251 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-25 22:47:14 (23708): Guest Log: 00:00:00.000272 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-25 22:47:14 (23708): Guest Log: 00:00:00.000294 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-25 22:47:14 (23708): Guest Log: 00:00:00.000295 main     Process ID: 1299
2025-05-25 22:47:14 (23708): Guest Log: 00:00:00.000295 main     Package type: LINUX_64BITS_GENERIC
2025-05-25 22:47:14 (23708): Guest Log: 00:00:00.001270 main     5.2.32 r132073 started. Verbose level = 0
2025-05-25 22:47:14 (23708): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-25 22:47:14 (23708): Guest Log: [INFO] Mounting shared directory
2025-05-25 22:47:14 (23708): Guest Log: [INFO] Checking for init_data.xml
2025-05-25 22:47:21 (23708): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-25 22:47:21 (23708): Guest Log: [INFO] Detected branch: prod
2025-05-25 22:47:22 (23708): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-25 22:47:22 (23708): Guest Log: Copying input files
2025-05-25 22:47:24 (23708): Guest Log: Copied input files into RunAtlas.
2025-05-25 22:47:24 (23708): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-25 22:47:24 (23708): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-25 22:47:24 (23708): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-25 22:47:24 (23708): Guest Log: Further information can be found at the LHC@home message board.
2025-05-25 22:47:24 (23708): Guest Log: 00:00:10.006618 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 545 999 000ns (GuestNow=1 748 234 844 077 173 000 ns GuestLast=1 748 213 232 531 174 000 ns fSetTimeLastLoop=true )
2025-05-25 22:47:32 (23708): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-25 22:47:33 (23708): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-25 22:47:33 (23708): Guest Log: 2.6.3.0 1580 0 30188 146425 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-25 22:47:34 (23708): Guest Log: copied the webapp to /var/www
2025-05-25 22:47:34 (23708): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-25 22:47:34 (23708): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-25 22:47:34 (23708): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-25 22:47:34 (23708): Guest Log:  *** Starting ATLAS job. (PandaID=6665719370 taskID=44871837) ***
2025-05-26 00:29:12 (23708): Status Report: Elapsed Time: '6000.217068'
2025-05-26 00:29:12 (23708): Status Report: CPU Time: '19226.109375'
2025-05-26 02:10:48 (23708): Status Report: Elapsed Time: '12001.147884'
2025-05-26 02:10:48 (23708): Status Report: CPU Time: '41049.703125'
2025-05-26 02:46:12 (23708): Guest Log:  *** Job finished ***
2025-05-26 02:46:12 (23708): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:45:58,941 | INFO     | [data] queue_monitor thread has finished
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:02,892 | INFO     | job.realtimelogging is not enabled
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:03,905 | INFO     | [payload] run_realtimelog thread has finished
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:05,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140134475335488)>', '<ExcThread(monitor, started 140133743441664)>']
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:05,669 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:05,670 | INFO     | [monitor] control thread has ended
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,302 | INFO     | all workflow threads have been joined
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,302 | INFO     | end of generic workflow (traces error code: 0)
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,302 | INFO     | traces error code: 0
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,302 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,371 [wrapper] ==== pilot stdout END ====
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,374 [wrapper] ==== wrapper stdout RESUME ====
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,377 [wrapper] pilotpid: 5888
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,380 [wrapper] Pilot exit status: 0
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,559 [wrapper] pandaids: 6665719370
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,587 [wrapper] cleanup supervisor_pilot 13953 5889
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,591 [wrapper] Test setup, not cleaning
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,596 [wrapper] apfmon messages muted
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,599 [wrapper] ==== wrapper stdout END ====
2025-05-26 02:46:12 (23708): Guest Log: 2025-05-26 08:46:10,603 [wrapper] ==== wrapper stderr END ====
2025-05-26 02:46:12 (23708): Guest Log:  *** Error codes and diagnostics ***
2025-05-26 02:46:12 (23708): Guest Log:     "exeErrorCode": 0,
2025-05-26 02:46:12 (23708): Guest Log:     "exeErrorDiag": "",
2025-05-26 02:46:12 (23708): Guest Log:     "pilotErrorCode": 0,
2025-05-26 02:46:12 (23708): Guest Log:     "pilotErrorDiag": "",
2025-05-26 02:46:12 (23708): Guest Log:  *** Listing of results directory ***
2025-05-26 02:46:12 (23708): Guest Log: total 206688
2025-05-26 02:46:12 (23708): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 25 06:05 pilot3.tar.gz
2025-05-26 02:46:12 (23708): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 25 06:23 queuedata.json
2025-05-26 02:46:12 (23708): Guest Log: -rwx------. 1 atlas atlas     37140 May 25 06:25 runpilot2-wrapper.sh
2025-05-26 02:46:12 (23708): Guest Log: -rwxr-xr-x. 1 atlas atlas     11897 May 26 04:47 init_data.xml
2025-05-26 02:46:12 (23708): Guest Log: -rwxr-xr-x. 1 atlas atlas    508879 May 26 04:47 input.tar.gz
2025-05-26 02:46:12 (23708): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 26 04:47 start_atlas.sh
2025-05-26 02:46:12 (23708): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 26 04:47 EVNT.44871834._001212.pool.root.1 -> /data/./ATLAS.root_0
2025-05-26 02:46:12 (23708): Guest Log: -rw-r--r--. 1 atlas atlas      2559 May 26 04:47 pandaJob.out
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas    990811 May 26 04:48 agis_schedconf.cvmfs.json
2025-05-26 02:46:12 (23708): Guest Log: drwx------. 4 atlas atlas      4096 May 26 04:48 pilot3
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas 204872106 May 26 08:44 HITS.44871837._030401.pool.root.1
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas        95 May 26 08:44 pilot_heartbeat.json
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas      1032 May 26 08:45 memory_monitor_summary.json
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas   1596740 May 26 08:45 agis_ddmendpoints.agis.ALL.json
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas    315733 May 26 08:45 log.44871837._030401.job.log.tgz.1
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas      7724 May 26 08:45 heartbeat.json
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas      4801 May 26 08:46 pilotlog.txt
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas   1186135 May 26 08:46 log.44871837._030401.job.log.1
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas       357 May 26 08:46 output.list
2025-05-26 02:46:12 (23708): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 26 08:46 runtime_log
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas   1525760 May 26 08:46 result.tar.gz
2025-05-26 02:46:12 (23708): Guest Log: -rw-r--r--. 1 atlas atlas      8605 May 26 08:46 runtime_log.err
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas       661 May 26 08:46 OqNODmJyJd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFcTKDmDzuUdm.diag
2025-05-26 02:46:12 (23708): Guest Log: Looking for outputfile HITS.44871837._030401.pool.root.1
2025-05-26 02:46:12 (23708): Guest Log: HITS file was successfully produced
2025-05-26 02:46:12 (23708): Guest Log: -rw-------. 1 atlas atlas 204872106 May 26 08:44 /home/atlas/RunAtlas/HITS.44871837._030401.pool.root.1
2025-05-26 02:46:13 (23708): Guest Log: Successfully finished the ATLAS job!
2025-05-26 02:46:13 (23708): Guest Log: Copying the results back to the shared directory!
2025-05-26 02:46:13 (23708): Guest Log:  *** Contents of shared directory: ***
2025-05-26 02:46:13 (23708): Guest Log: total 419836
2025-05-26 02:46:13 (23708): Guest Log: -rwxrwxrwx. 1 root root 222966799 May 26 04:46 ATLAS.root_0
2025-05-26 02:46:13 (23708): Guest Log: -rwxrwxrwx. 1 root root 204872106 May 26 08:46 HITS.pool.root.1
2025-05-26 02:46:13 (23708): Guest Log: -rwxrwxrwx. 1 root root     11897 May 26 04:46 init_data.xml
2025-05-26 02:46:13 (23708): Guest Log: -rwxrwxrwx. 1 root root    508879 May 25 18:38 input.tar.gz
2025-05-26 02:46:13 (23708): Guest Log: -rwxrwxrwx. 1 root root   1525760 May 26 08:46 result.tar.gz
2025-05-26 02:46:13 (23708): Guest Log: -rwxrwxrwx. 1 root root     15093 May 25 18:38 start_atlas.sh
2025-05-26 02:46:13 (23708): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-26 02:46:13 (23708): VM Completion File Detected.
2025-05-26 02:46:13 (23708): Powering off VM.
2025-05-26 02:46:14 (23708): Successfully stopped VM.
2025-05-26 02:46:14 (23708): Deregistering VM. (boinc_2a7e742f16f810de, slot#1)
2025-05-26 02:46:14 (23708): Removing network bandwidth throttle group from VM.
2025-05-26 02:46:14 (23708): Removing VM from VirtualBox.
02:46:19 (23708): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN