Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:36:30 (3697578): wrapper (7.7.26015): starting
14:36:30 (3697578): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 14:36:30] Arguments: --nthreads 8
[2025-05-25 14:36:30] Threads: 8
[2025-05-25 14:36:30] Checking for CVMFS
[2025-05-25 14:36:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 14:36:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 14:36:30] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 14:36:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 14:36:31] 2.12.6.0 1817818 9253 307268 146411 2 634 34918068 40960000 17012 16776704 0 41877284 99.640 42115430 28026 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 14:36:31] CVMFS is ok
[2025-05-25 14:36:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 14:36:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 14:36:31] Further information can be found at the LHC@home message board.
[2025-05-25 14:36:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 14:36:31] Checking for apptainer binary...
[2025-05-25 14:36:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 14:36:31] Running /usr/bin/apptainer --version
[2025-05-25 14:36:31] apptainer version 1.4.1-1.el9
[2025-05-25 14:36:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 14:36:31] c7-11-12.aglt2.org
[2025-05-25 14:36:31] apptainer works
[2025-05-25 14:36:31] Set ATHENA_PROC_NUMBER=8
[2025-05-25 14:36:31] Set ATHENA_CORE_NUMBER=8
[2025-05-25 14:36:31] Starting ATLAS job with PandaID=6665723617
[2025-05-25 14:36:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 20:54:43]  *** The last 200 lines of the pilot log: ***
[2025-05-25 20:54:43] 2025-05-26 00:54:27,093 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 20:54:43] 2025-05-26 00:54:27,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 20:54:43] 2025-05-26 00:54:27,093 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 20:54:43] 2025-05-26 00:54:27,093 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 20:54:43] 2025-05-26 00:54:27,138 | INFO     | fitting pss+swap vs Time
[2025-05-25 20:54:43] 2025-05-26 00:54:27,138 | INFO     | sum of square deviations: 15706654858.0
[2025-05-25 20:54:43] 2025-05-26 00:54:27,161 | INFO     | sum of deviations: 79636191337.99998
[2025-05-25 20:54:43] 2025-05-26 00:54:27,161 | INFO     | mean x: 1748209536.0
[2025-05-25 20:54:43] 2025-05-26 00:54:27,161 | INFO     | mean y: 2068577.972972973
[2025-05-25 20:54:43] 2025-05-26 00:54:27,161 | INFO     | -- intersect: -8861737901.921867
[2025-05-25 20:54:43] 2025-05-26 00:54:27,161 | INFO     | intersect: -8861737901.921867
[2025-05-25 20:54:43] 2025-05-26 00:54:27,162 | INFO     | chi2: 2.4689948985574057
[2025-05-25 20:54:43] 2025-05-26 00:54:27,162 | INFO     | sum of square deviations: 15078522759.232899
[2025-05-25 20:54:43] 2025-05-26 00:54:27,183 | INFO     | monitor loop #1446: job 0:6665723617 is in state 'finished'
[2025-05-25 20:54:43] 2025-05-26 00:54:27,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 20:54:43] 2025-05-26 00:54:27,192 | INFO     | sum of deviations: 81534045683.95894
[2025-05-25 20:54:43] 2025-05-26 00:54:27,192 | INFO     | mean x: 1748209383.5068493
[2025-05-25 20:54:43] 2025-05-26 00:54:27,192 | INFO     | mean y: 2069027.6164383562
[2025-05-25 20:54:43] 2025-05-26 00:54:27,193 | INFO     | -- intersect: -9451017724.711058
[2025-05-25 20:54:43] 2025-05-26 00:54:27,193 | INFO     | intersect: -9451017724.711058
[2025-05-25 20:54:43] 2025-05-26 00:54:27,193 | INFO     | chi2: 2.4507716929746133
[2025-05-25 20:54:43] 2025-05-26 00:54:27,193 | INFO     | current chi2=2.4507716929746133 (change=0.7380819455495827 %)
[2025-05-25 20:54:43] 2025-05-26 00:54:27,193 | INFO     | right removable region: 364
[2025-05-25 20:54:43] 2025-05-26 00:54:27,193 | INFO     | sum of square deviations: 15078409909.232899
[2025-05-25 20:54:43] 2025-05-26 00:54:27,219 | INFO     | sum of deviations: 10189088709.835611
[2025-05-25 20:54:43] 2025-05-26 00:54:27,219 | INFO     | mean x: 1748209688.5068493
[2025-05-25 20:54:43] 2025-05-26 00:54:27,219 | INFO     | mean y: 2085395.2657534247
[2025-05-25 20:54:43] 2025-05-26 00:54:27,220 | INFO     | -- intersect: -1179250283.152381
[2025-05-25 20:54:43] 2025-05-26 00:54:27,220 | INFO     | intersect: -1179250283.152381
[2025-05-25 20:54:43] 2025-05-26 00:54:27,220 | INFO     | chi2: 0.41644419810335465
[2025-05-25 20:54:43] 2025-05-26 00:54:27,220 | INFO     | current chi2=0.41644419810335465 (change=83.13304744587865 %)
[2025-05-25 20:54:43] 2025-05-26 00:54:27,220 | INFO     | sum of square deviations: 14467142022.93052
[2025-05-25 20:54:43] 2025-05-26 00:54:27,245 | INFO     | sum of deviations: -1892025437.069439
[2025-05-25 20:54:43] 2025-05-26 00:54:27,245 | INFO     | mean x: 1748209841.0138888
[2025-05-25 20:54:43] 2025-05-26 00:54:27,245 | INFO     | mean y: 2088385.6138888889
[2025-05-25 20:54:43] 2025-05-26 00:54:27,245 | INFO     | -- intersect: 230720791.606084
[2025-05-25 20:54:43] 2025-05-26 00:54:27,245 | INFO     | intersect: 230720791.606084
[2025-05-25 20:54:43] 2025-05-26 00:54:27,246 | INFO     | chi2: 0.3020954426699377
[2025-05-25 20:54:43] 2025-05-26 00:54:27,246 | INFO     | current chi2=0.3020954426699377 (change=27.458361997646907 %)
[2025-05-25 20:54:43] 2025-05-26 00:54:27,246 | INFO     | sum of square deviations: 13872618636.591608
[2025-05-25 20:54:43] 2025-05-26 00:54:27,249 | INFO     | sum of deviations: 3877815609.4647865
[2025-05-25 20:54:43] 2025-05-26 00:54:27,267 | INFO     | mean x: 1748209993.5211267
[2025-05-25 20:54:43] 2025-05-26 00:54:27,267 | INFO     | mean y: 2086902.938028169
[2025-05-25 20:54:43] 2025-05-26 00:54:27,267 | INFO     | -- intersect: -486590554.3674776
[2025-05-25 20:54:43] 2025-05-26 00:54:27,267 | INFO     | intersect: -486590554.3674776
[2025-05-25 20:54:43] 2025-05-26 00:54:27,268 | INFO     | chi2: 0.2880012796866905
[2025-05-25 20:54:43] 2025-05-26 00:54:27,268 | INFO     | current chi2=0.2880012796866905 (change=4.6654669327952005 %)
[2025-05-25 20:54:43] 2025-05-26 00:54:27,268 | INFO     | left removable region: 30
[2025-05-25 20:54:43] 2025-05-26 00:54:27,268 | INFO     | sum of square deviations: 11553440017.413162
[2025-05-25 20:54:43] 2025-05-26 00:54:27,283 | INFO     | sum of deviations: 27628476195.92812
[2025-05-25 20:54:43] 2025-05-26 00:54:27,284 | INFO     | mean x: 1748210268.0419161
[2025-05-25 20:54:43] 2025-05-26 00:54:27,284 | INFO     | mean y: 2081553.362275449
[2025-05-25 20:54:43] 2025-05-26 00:54:27,284 | INFO     | -- intersect: -4178524889.6776867
[2025-05-25 20:54:43] 2025-05-26 00:54:27,284 | INFO     | intersect: -4178524889.6776867
[2025-05-25 20:54:43] 2025-05-26 00:54:27,284 | INFO     | chi2: 0.18449406924172704
[2025-05-25 20:54:43] 2025-05-26 00:54:27,298 | INFO     | -- intersect: -4178524889.6776867
[2025-05-25 20:54:43] 2025-05-26 00:54:27,298 | INFO     | current memory leak: 2.39 B/s (using 334 data points, chi2=0.18)
[2025-05-25 20:54:43] 2025-05-26 00:54:27,299 | INFO     | ..............................
[2025-05-25 20:54:43] 2025-05-26 00:54:27,299 | INFO     | . Timing measurements:
[2025-05-25 20:54:43] 2025-05-26 00:54:27,299 | INFO     | . get job = 0 s
[2025-05-25 20:54:43] 2025-05-26 00:54:27,299 | INFO     | . initial setup = 3 s
[2025-05-25 20:54:43] 2025-05-26 00:54:27,299 | INFO     | . payload setup = 15 s
[2025-05-25 20:54:43] 2025-05-26 00:54:27,299 | INFO     | . stage-in = 0 s
[2025-05-25 20:54:43] 2025-05-26 00:54:27,299 | INFO     | . payload execution = 22579 s
[2025-05-25 20:54:43] 2025-05-26 00:54:27,299 | INFO     | . stage-out = 2 s
[2025-05-25 20:54:43] 2025-05-26 00:54:27,299 | INFO     | . log creation = 0 s
[2025-05-25 20:54:43] 2025-05-26 00:54:27,299 | INFO     | ..............................
[2025-05-25 20:54:43] 2025-05-26 00:54:27,580 | INFO     | 
[2025-05-25 20:54:43] 2025-05-26 00:54:27,580 | INFO     | job summary report
[2025-05-25 20:54:43] 2025-05-26 00:54:27,580 | INFO     | --------------------------------------------------
[2025-05-25 20:54:43] 2025-05-26 00:54:27,580 | INFO     | PanDA job id: 6665723617
[2025-05-25 20:54:43] 2025-05-26 00:54:27,580 | INFO     | task id: 44871837
[2025-05-25 20:54:43] 2025-05-26 00:54:27,580 | INFO     | errors: (none)
[2025-05-25 20:54:43] 2025-05-26 00:54:27,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 20:54:43] 2025-05-26 00:54:27,580 | INFO     | pilot state: finished 
[2025-05-25 20:54:43] 2025-05-26 00:54:27,580 | INFO     | transexitcode: 0
[2025-05-25 20:54:43] 2025-05-26 00:54:27,580 | INFO     | exeerrorcode: 0
[2025-05-25 20:54:43] 2025-05-26 00:54:27,580 | INFO     | exeerrordiag: 
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | exitcode: 0
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | exitmsg: OK
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | cpuconsumptiontime: 41933 s
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | nevents: 400
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | neventsw: 0
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | pid: 3715152
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | pgrp: 3715152
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | corecount: 8
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | event service: False
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | sizes: {0: 2393570, 1: 2393769, 11: 2393769, 13: 2394003, 22: 2394059, 22599: 2428541, 22602: 2437482, 22605: 2437538, 22620: 2437708}
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | --------------------------------------------------
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | 
[2025-05-25 20:54:43] 2025-05-26 00:54:27,581 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-25 20:54:43] 2025-05-26 00:54:27,604 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,605 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,606 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 20:54:43] 2025-05-26 00:54:27,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,606 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 20:54:43] 2025-05-26 00:54:27,606 | INFO     | job 6665723617 has completed (purged errors)
[2025-05-25 20:54:43] 2025-05-26 00:54:27,606 | INFO     | overall cleanup function is called
[2025-05-25 20:54:43] 2025-05-26 00:54:28,619 | INFO     | --- collectZombieJob: --- 10, [3715152]
[2025-05-25 20:54:43] 2025-05-26 00:54:28,619 | INFO     | zombie collector waiting for pid 3715152
[2025-05-25 20:54:43] 2025-05-26 00:54:28,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 20:54:43] 2025-05-26 00:54:28,619 | INFO     | collected zombie processes
[2025-05-25 20:54:43] 2025-05-26 00:54:28,620 | INFO     | will attempt to kill all subprocesses of pid=3715152
[2025-05-25 20:54:43] 2025-05-26 00:54:29,413 | INFO     | process IDs to be killed: [3715152] (in reverse order)
[2025-05-25 20:54:43] 2025-05-26 00:54:29,629 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 20:54:43] 2025-05-26 00:54:29,629 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 20:54:43] 2025-05-26 00:54:29,661 | INFO     | did not find any defunct processes belonging to 3715152
[2025-05-25 20:54:43] 2025-05-26 00:54:29,679 | INFO     | did not find any defunct processes belonging to 3715152
[2025-05-25 20:54:43] 2025-05-26 00:54:29,679 | INFO     | ready for new job
[2025-05-25 20:54:43] 2025-05-26 00:54:29,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 20:54:43] 2025-05-26 00:54:29,681 | INFO     | **************************************
[2025-05-25 20:54:43] 2025-05-26 00:54:29,681 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 20:54:43] 2025-05-26 00:54:29,682 | INFO     | **************************************
[2025-05-25 20:54:43] 2025-05-26 00:54:29,682 | INFO     | 
[2025-05-25 20:54:43] 2025-05-26 00:54:29,701 | INFO     | architecture information:
[2025-05-25 20:54:43] 2025-05-26 00:54:29,701 | INFO     | executing command: cat /etc/os-release
[2025-05-25 20:54:43] 2025-05-26 00:54:29,720 | INFO     | cat /etc/os-release:
[2025-05-25 20:54:43] NAME="CentOS Linux"
[2025-05-25 20:54:43] VERSION="7 (Core)"
[2025-05-25 20:54:43] ID="centos"
[2025-05-25 20:54:43] ID_LIKE="rhel fedora"
[2025-05-25 20:54:43] VERSION_ID="7"
[2025-05-25 20:54:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 20:54:43] ANSI_COLOR="0;31"
[2025-05-25 20:54:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 20:54:43] HOME_URL="https://www.centos.org/"
[2025-05-25 20:54:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 20:54:43] 
[2025-05-25 20:54:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 20:54:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 20:54:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 20:54:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 20:54:43] 
[2025-05-25 20:54:43] 2025-05-26 00:54:29,721 | INFO     | **************************************
[2025-05-25 20:54:43] 2025-05-26 00:54:30,223 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-25 20:54:43] 2025-05-26 00:54:30,246 | INFO     | sufficient remaining disk space (84798341120 B)
[2025-05-25 20:54:43] 2025-05-26 00:54:30,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 20:54:43] 2025-05-26 00:54:30,246 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 20:54:43] 2025-05-26 00:54:30,246 | INFO     | update_server=False
[2025-05-25 20:54:43] 2025-05-26 00:54:30,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 20:54:43] 2025-05-26 00:54:30,247 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 20:54:43] 2025-05-26 00:54:30,247 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 20:54:43] 2025-05-26 00:54:30,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 20:54:43] 2025-05-26 00:54:30,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 20:54:43] 2025-05-26 00:54:30,506 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 20:54:43] 2025-05-26 00:54:30,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 20:54:43] 2025-05-26 00:54:30,697 | INFO     | aborting loop
[2025-05-25 20:54:43] 2025-05-26 00:54:30,967 | INFO     | all job control threads have been joined
[2025-05-25 20:54:43] 2025-05-26 00:54:31,249 | INFO     | all payload control threads have been joined
[2025-05-25 20:54:43] 2025-05-26 00:54:31,253 | INFO     | [job] retrieve thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:31,326 | INFO     | all data control threads have been joined
[2025-05-25 20:54:43] 2025-05-26 00:54:31,514 | INFO     | [data] copytool_in thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:31,610 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:31,703 | INFO     | [job] job monitor thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:31,707 | INFO     | [payload] failed_post thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:31,958 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:31,958 | INFO     | [job] validate thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:31,973 | INFO     | [job] control thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:32,114 | INFO     | [payload] validate_post thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:32,220 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:32,268 | INFO     | [payload] control thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:32,339 | INFO     | [data] control thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:32,422 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:32,513 | INFO     | [data] copytool_out thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:32,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 20:54:43] 2025-05-26 00:54:33,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 20:54:43] 2025-05-26 00:54:33,609 | INFO     | [job] queue monitor thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:37,075 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 20:54:43] 2025-05-26 00:54:37,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140175791032128)>', '<ExcThread(monitor, started 140175292221184)>']
[2025-05-25 20:54:43] 2025-05-26 00:54:38,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 20:54:43] 2025-05-26 00:54:38,308 | INFO     | [monitor] control thread has ended
[2025-05-25 20:54:43] 2025-05-26 00:54:42,691 | INFO     | all workflow threads have been joined
[2025-05-25 20:54:43] 2025-05-26 00:54:42,691 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 20:54:43] 2025-05-26 00:54:42,691 | INFO     | traces error code: 0
[2025-05-25 20:54:43] 2025-05-26 00:54:42,692 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 20:54:43] 2025-05-26 00:54:42,985 [wrapper] ==== pilot stdout END ====
[2025-05-25 20:54:43] 2025-05-26 00:54:42,987 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 20:54:43] 2025-05-26 00:54:42,989 [wrapper] pilotpid: 3705687
[2025-05-25 20:54:43] 2025-05-26 00:54:42,991 [wrapper] Pilot exit status: 0
[2025-05-25 20:54:43] 2025-05-26 00:54:43,023 [wrapper] pandaids: 6665723617
[2025-05-25 20:54:43] 2025-05-26 00:54:43,121 [wrapper] cleanup supervisor_pilot 2621027 3705688
[2025-05-25 20:54:43] 2025-05-26 00:54:43,124 [wrapper] Test setup, not cleaning
[2025-05-25 20:54:43] 2025-05-26 00:54:43,127 [wrapper] apfmon messages muted
[2025-05-25 20:54:43] 2025-05-26 00:54:43,130 [wrapper] ==== wrapper stdout END ====
[2025-05-25 20:54:43] 2025-05-26 00:54:43,132 [wrapper] ==== wrapper stderr END ====
[2025-05-25 20:54:43]  *** Error codes and diagnostics ***
[2025-05-25 20:54:43]     "exeErrorCode": 0,
[2025-05-25 20:54:43]     "exeErrorDiag": "",
[2025-05-25 20:54:43]     "pilotErrorCode": 0,
[2025-05-25 20:54:43]     "pilotErrorDiag": "",
[2025-05-25 20:54:43]  *** Listing of results directory ***
[2025-05-25 20:54:43] total 416640
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas    495897 May 25 05:58 pilot3.tar.gz
[2025-05-25 20:54:43] -rwx------. 1 boincer umatlas     37140 May 25 06:10 runpilot2-wrapper.sh
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas      5111 May 25 06:10 queuedata.json
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas       100 May 25 14:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 20:54:43] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 14:36 run_atlas
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas       105 May 25 14:36 job.xml
[2025-05-25 20:54:43] -rw-r--r--. 2 boincer umatlas 221876411 May 25 14:36 EVNT.44871834._001305.pool.root.1
[2025-05-25 20:54:43] -rw-r--r--. 2 boincer umatlas     15093 May 25 14:36 start_atlas.sh
[2025-05-25 20:54:43] drwxrwx--x. 2 boincer umatlas      4096 May 25 14:36 shared
[2025-05-25 20:54:43] -rw-r--r--. 2 boincer umatlas    508875 May 25 14:36 input.tar.gz
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas         0 May 25 14:36 boinc_lockfile
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas      2559 May 25 14:36 pandaJob.out
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas    990811 May 25 14:36 agis_schedconf.cvmfs.json
[2025-05-25 20:54:43] drwx------. 4 boincer umatlas      4096 May 25 14:36 pilot3
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas      6896 May 25 20:48 init_data.xml
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas 196193713 May 25 20:53 HITS.44871837._032734.pool.root.1
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas       530 May 25 20:53 boinc_task_state.xml
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas        95 May 25 20:53 pilot_heartbeat.json
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas      1035 May 25 20:54 memory_monitor_summary.json
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas   1596740 May 25 20:54 agis_ddmendpoints.agis.ALL.json
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas    473249 May 25 20:54 log.44871837._032734.job.log.tgz.1
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas      7696 May 25 20:54 heartbeat.json
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas      8192 May 25 20:54 boinc_mmap_file
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas        28 May 25 20:54 wrapper_checkpoint.txt
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas      4476 May 25 20:54 pilotlog.txt
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas   1897333 May 25 20:54 log.44871837._032734.job.log.1
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas       357 May 25 20:54 output.list
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas       620 May 25 20:54 runtime_log
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas   2385920 May 25 20:54 result.tar.gz
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas       657 May 25 20:54 wuvMDmqUNd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmatTKDm71QETo.diag
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas      8660 May 25 20:54 runtime_log.err
[2025-05-25 20:54:43] -rw-r--r--. 1 boincer umatlas     20958 May 25 20:54 stderr.txt
[2025-05-25 20:54:43] HITS file was successfully produced:
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas 196193713 May 25 20:53 shared/HITS.pool.root.1
[2025-05-25 20:54:43]  *** Contents of shared directory: ***
[2025-05-25 20:54:43] total 411128
[2025-05-25 20:54:43] -rw-r--r--. 2 boincer umatlas 221876411 May 25 14:36 ATLAS.root_0
[2025-05-25 20:54:43] -rw-r--r--. 2 boincer umatlas     15093 May 25 14:36 start_atlas.sh
[2025-05-25 20:54:43] -rw-r--r--. 2 boincer umatlas    508875 May 25 14:36 input.tar.gz
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas 196193713 May 25 20:53 HITS.pool.root.1
[2025-05-25 20:54:43] -rw-------. 1 boincer umatlas   2385920 May 25 20:54 result.tar.gz
20:54:44 (3697578): run_atlas exited; CPU time 42432.356847
20:54:44 (3697578): called boinc_finish(0)

</stderr_txt>
]]>

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