Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:46:05 (828969): wrapper (7.7.26015): starting
08:46:05 (828969): wrapper: running run_atlas (--nthreads 3)
[2025-05-26 08:46:05] Arguments: --nthreads 3
[2025-05-26 08:46:05] Threads: 3
[2025-05-26 08:46:05] Checking for CVMFS
[2025-05-26 08:46:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 08:46:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 08:46:05] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 08:46:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 08:46:05] 2.9.2.0 69822 2840 80792 146428 1 55 35892836 36864000 0 130560 0 2023843 99.989 700492 8326 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-26 08:46:05] CVMFS is ok
[2025-05-26 08:46:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-26 08:46:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-26 08:46:05] Further information can be found at the LHC@home message board.
[2025-05-26 08:46:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 08:46:05] Checking for apptainer binary...
[2025-05-26 08:46:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 08:46:05] Running /usr/bin/apptainer --version
[2025-05-26 08:46:05] apptainer version 1.3.6-6.1
[2025-05-26 08:46:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 08:46:05] thA354b
[2025-05-26 08:46:05] apptainer works
[2025-05-26 08:46:05] Set ATHENA_PROC_NUMBER=3
[2025-05-26 08:46:05] Set ATHENA_CORE_NUMBER=3
[2025-05-26 08:46:05] Starting ATLAS job with PandaID=6665728792
[2025-05-26 08:46:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 10:26:54]  *** The last 200 lines of the pilot log: ***
[2025-05-26 10:26:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-26 10:26:54]  is_altstaged=None
[2025-05-26 10:26:54]  is_tar=False
[2025-05-26 10:26:54]  lfn=log.44871837._034680.job.log.tgz.1
[2025-05-26 10:26:54]  mtime=0
[2025-05-26 10:26:54]  protocol_id=None
[2025-05-26 10:26:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-26 10:26:54]  replicas=None
[2025-05-26 10:26:54]  scope=mc23_13p6TeV
[2025-05-26 10:26:54]  status=None
[2025-05-26 10:26:54]  status_code=0
[2025-05-26 10:26:54]  storage_token=
[2025-05-26 10:26:54]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6665728792/log.44871837._034680.job.log.tgz.1
[2025-05-26 10:26:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/b6/log.44871837._034680.job.log.tgz.1
[2025-05-26 10:26:54]  workdir=None
[2025-05-26 10:26:54] ]
[2025-05-26 10:26:54] 2025-05-26 08:26:30,652 | INFO     | transferring file log.44871837._034680.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6665728792/log.44871837._034680.job.log.tgz.1 to /local/data/boinc/
[2025-05-26 10:26:54] 2025-05-26 08:26:30,652 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6665728792/log.44871837._034680.job.log.tgz.1 /local/data/boinc/slots/0/log.44871837._0346
[2025-05-26 10:26:54] 2025-05-26 08:26:30,665 | INFO     | adding to output.list: log.44871837._034680.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/b6/log.44871837._034680.job.log.tg
[2025-05-26 10:26:54] 2025-05-26 08:26:30,665 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-26 10:26:54] 2025-05-26 08:26:30,665 | INFO     | summary of transferred files:
[2025-05-26 10:26:54] 2025-05-26 08:26:30,665 | INFO     |  -- lfn=log.44871837._034680.job.log.tgz.1, status_code=0, status=transferred
[2025-05-26 10:26:54] 2025-05-26 08:26:30,666 | INFO     | stage-out finished correctly
[2025-05-26 10:26:54] 2025-05-26 08:26:30,696 | WARNING  | process 839086 can no longer be monitored (due to stat problems) - aborting
[2025-05-26 10:26:54] 2025-05-26 08:26:30,696 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6665728792/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 10:26:54] 2025-05-26 08:26:30,732 | INFO     | number of running child processes to parent process 839086: 1
[2025-05-26 10:26:54] 2025-05-26 08:26:30,732 | INFO     | maximum number of monitored processes: 6
[2025-05-26 10:26:54] 2025-05-26 08:26:32,741 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-26 10:26:54] 2025-05-26 08:26:32,773 | INFO     | job 6665728792 has state=finished
[2025-05-26 10:26:54] 2025-05-26 08:26:32,773 | INFO     | preparing for final server update for job 6665728792 in state='finished'
[2025-05-26 10:26:54] 2025-05-26 08:26:32,773 | INFO     | this job has now completed (state=finished)
[2025-05-26 10:26:54] 2025-05-26 08:26:32,773 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-26 10:26:54] 2025-05-26 08:26:32,773 | INFO     | log transfer has been attempted: DONE
[2025-05-26 10:26:54] 2025-05-26 08:26:32,773 | INFO     | job 6665728792 has finished - writing final server update
[2025-05-26 10:26:54] 2025-05-26 08:26:32,773 | INFO     | total number of processed events: 400 (read)
[2025-05-26 10:26:54] 2025-05-26 08:26:32,774 | INFO     | executing command: lscpu
[2025-05-26 10:26:54] 2025-05-26 08:26:32,788 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-26 10:26:54] 2025-05-26 08:26:33,235 | INFO     | monitor loop #463: job 0:6665728792 is in state 'finished'
[2025-05-26 10:26:54] 2025-05-26 08:26:33,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 10:26:54] 2025-05-26 08:26:34,979 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-26 10:26:54] 2025-05-26 08:26:34,980 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6665728792/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 10:26:54] 2025-05-26 08:26:34,980 | INFO     | extracted standard info from prmon json
[2025-05-26 10:26:54] 2025-05-26 08:26:34,980 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 10:26:54] 2025-05-26 08:26:34,980 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 10:26:54] 2025-05-26 08:26:34,980 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 10:26:54] 2025-05-26 08:26:34,980 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 10:26:54] 2025-05-26 08:26:34,981 | INFO     | fitting pss+swap vs Time
[2025-05-26 10:26:54] 2025-05-26 08:26:34,981 | INFO     | sum of square deviations: 241429643.0
[2025-05-26 10:26:54] 2025-05-26 08:26:34,981 | INFO     | sum of deviations: -13580299673.499998
[2025-05-26 10:26:54] 2025-05-26 08:26:34,981 | INFO     | mean x: 1748245070.5
[2025-05-26 10:26:54] 2025-05-26 08:26:34,981 | INFO     | mean y: 2437854.5108695654
[2025-05-26 10:26:54] 2025-05-26 08:26:34,981 | INFO     | -- intersect: 98340370450.92004
[2025-05-26 10:26:54] 2025-05-26 08:26:34,981 | INFO     | intersect: 98340370450.92004
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | chi2: 0.11847099847400526
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | -- intersect: 98340370450.92004
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | current memory leak: -56.25 B/s (using 92 data points, chi2=0.12)
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | ..............................
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | . Timing measurements:
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | . get job = 0 s
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | . initial setup = 1 s
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | . payload setup = 3 s
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | . stage-in = 0 s
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | . payload execution = 5999 s
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | . stage-out = 0 s
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | . log creation = 0 s
[2025-05-26 10:26:54] 2025-05-26 08:26:34,982 | INFO     | ..............................
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | 
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | job summary report
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | --------------------------------------------------
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | PanDA job id: 6665728792
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | task id: 44871837
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | errors: (none)
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | pilot state: finished 
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | transexitcode: 0
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | exeerrorcode: 0
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | exeerrordiag: 
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | exitcode: 0
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | exitmsg: OK
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | cpuconsumptiontime: 17334 s
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | nevents: 400
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | neventsw: 0
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | pid: 839086
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | pgrp: 839086
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | corecount: 3
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | event service: False
[2025-05-26 10:26:54] 2025-05-26 08:26:35,013 | INFO     | sizes: {0: 2393572, 1: 2393771, 3: 2393977, 11: 2394005, 6006: 2420781, 6007: 2420780, 6008: 2429911, 6010: 2429967, 6012: 2430137}
[2025-05-26 10:26:54] 2025-05-26 08:26:35,014 | INFO     | --------------------------------------------------
[2025-05-26 10:26:54] 2025-05-26 08:26:35,014 | INFO     | 
[2025-05-26 10:26:54] 2025-05-26 08:26:35,014 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-26 10:26:54] 2025-05-26 08:26:35,025 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,025 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,025 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,025 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | job 6665728792 has completed (purged errors)
[2025-05-26 10:26:54] 2025-05-26 08:26:35,026 | INFO     | overall cleanup function is called
[2025-05-26 10:26:54] 2025-05-26 08:26:36,031 | INFO     | --- collectZombieJob: --- 10, [839086]
[2025-05-26 10:26:54] 2025-05-26 08:26:36,031 | INFO     | zombie collector waiting for pid 839086
[2025-05-26 10:26:54] 2025-05-26 08:26:36,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 10:26:54] 2025-05-26 08:26:36,031 | INFO     | collected zombie processes
[2025-05-26 10:26:54] 2025-05-26 08:26:36,031 | INFO     | will attempt to kill all subprocesses of pid=839086
[2025-05-26 10:26:54] 2025-05-26 08:26:36,070 | INFO     | process IDs to be killed: [839086] (in reverse order)
[2025-05-26 10:26:54] 2025-05-26 08:26:36,093 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 10:26:54] 2025-05-26 08:26:36,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 10:26:54] 2025-05-26 08:26:36,094 | INFO     | did not find any defunct processes belonging to 839086
[2025-05-26 10:26:54] 2025-05-26 08:26:36,095 | INFO     | did not find any defunct processes belonging to 839086
[2025-05-26 10:26:54] 2025-05-26 08:26:36,096 | INFO     | ready for new job
[2025-05-26 10:26:54] 2025-05-26 08:26:36,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 10:26:54] 2025-05-26 08:26:36,096 | INFO     | **************************************
[2025-05-26 10:26:54] 2025-05-26 08:26:36,096 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 10:26:54] 2025-05-26 08:26:36,096 | INFO     | **************************************
[2025-05-26 10:26:54] 2025-05-26 08:26:36,096 | INFO     | 
[2025-05-26 10:26:54] 2025-05-26 08:26:36,097 | INFO     | architecture information:
[2025-05-26 10:26:54] 2025-05-26 08:26:36,097 | INFO     | executing command: cat /etc/os-release
[2025-05-26 10:26:54] 2025-05-26 08:26:36,105 | INFO     | cat /etc/os-release:
[2025-05-26 10:26:54] NAME="CentOS Linux"
[2025-05-26 10:26:54] VERSION="7 (Core)"
[2025-05-26 10:26:54] ID="centos"
[2025-05-26 10:26:54] ID_LIKE="rhel fedora"
[2025-05-26 10:26:54] VERSION_ID="7"
[2025-05-26 10:26:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 10:26:54] ANSI_COLOR="0;31"
[2025-05-26 10:26:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 10:26:54] HOME_URL="https://www.centos.org/"
[2025-05-26 10:26:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 10:26:54] 
[2025-05-26 10:26:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 10:26:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 10:26:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 10:26:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 10:26:54] 
[2025-05-26 10:26:54] 2025-05-26 08:26:36,105 | INFO     | **************************************
[2025-05-26 10:26:54] 2025-05-26 08:26:36,609 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-26 10:26:54] 2025-05-26 08:26:36,622 | INFO     | sufficient remaining disk space (323745742848 B)
[2025-05-26 10:26:54] 2025-05-26 08:26:36,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 10:26:54] 2025-05-26 08:26:36,622 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 10:26:54] 2025-05-26 08:26:36,622 | INFO     | update_server=False
[2025-05-26 10:26:54] 2025-05-26 08:26:36,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 10:26:54] 2025-05-26 08:26:36,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 10:26:54] 2025-05-26 08:26:36,622 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 10:26:54] 2025-05-26 08:26:36,622 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 10:26:54] 2025-05-26 08:26:36,622 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 10:26:54] 2025-05-26 08:26:36,623 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 10:26:54] 2025-05-26 08:26:36,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 10:26:54] 2025-05-26 08:26:36,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 10:26:54] 2025-05-26 08:26:36,745 | INFO     | aborting loop
[2025-05-26 10:26:54] 2025-05-26 08:26:37,002 | INFO     | all payload control threads have been joined
[2025-05-26 10:26:54] 2025-05-26 08:26:37,410 | INFO     | all data control threads have been joined
[2025-05-26 10:26:54] 2025-05-26 08:26:37,628 | INFO     | [job] retrieve thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:37,628 | INFO     | [job] queue monitor thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:37,750 | INFO     | [job] job monitor thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:37,759 | INFO     | [data] copytool_in thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:38,008 | INFO     | [payload] control thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:38,031 | INFO     | all job control threads have been joined
[2025-05-26 10:26:54] 2025-05-26 08:26:38,080 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:38,352 | INFO     | [job] validate thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:38,416 | INFO     | [data] control thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:38,471 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:38,475 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:38,519 | INFO     | [payload] failed_post thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:38,628 | INFO     | [data] copytool_out thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:38,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 10:26:54] 2025-05-26 08:26:39,036 | INFO     | [job] control thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:39,045 | INFO     | [payload] validate_post thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:42,786 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:46,971 | INFO     | job.realtimelogging is not enabled
[2025-05-26 10:26:54] 2025-05-26 08:26:47,977 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 10:26:54] 2025-05-26 08:26:49,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840674068288)>', '<ExcThread(monitor, started 139840393807616)>']
[2025-05-26 10:26:54] 2025-05-26 08:26:49,689 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 10:26:54] 2025-05-26 08:26:49,689 | INFO     | [monitor] control thread has ended
[2025-05-26 10:26:54] 2025-05-26 08:26:54,571 | INFO     | all workflow threads have been joined
[2025-05-26 10:26:54] 2025-05-26 08:26:54,572 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 10:26:54] 2025-05-26 08:26:54,572 | INFO     | traces error code: 0
[2025-05-26 10:26:54] 2025-05-26 08:26:54,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 10:26:54] 2025-05-26 08:26:54,623 [wrapper] ==== pilot stdout END ====
[2025-05-26 10:26:54] 2025-05-26 08:26:54,626 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 10:26:54] 2025-05-26 08:26:54,628 [wrapper] pilotpid: 832606
[2025-05-26 10:26:54] 2025-05-26 08:26:54,630 [wrapper] Pilot exit status: 0
[2025-05-26 10:26:54] 2025-05-26 08:26:54,637 [wrapper] pandaids: 6665728792
[2025-05-26 10:26:54] 2025-05-26 08:26:54,652 [wrapper] cleanup supervisor_pilot  851203 832607
[2025-05-26 10:26:54] 2025-05-26 08:26:54,655 [wrapper] Test setup, not cleaning
[2025-05-26 10:26:54] 2025-05-26 08:26:54,657 [wrapper] apfmon messages muted
[2025-05-26 10:26:54] 2025-05-26 08:26:54,659 [wrapper] ==== wrapper stdout END ====
[2025-05-26 10:26:54] 2025-05-26 08:26:54,661 [wrapper] ==== wrapper stderr END ====
[2025-05-26 10:26:54]  *** Error codes and diagnostics ***
[2025-05-26 10:26:54]     "exeErrorCode": 0,
[2025-05-26 10:26:54]     "exeErrorDiag": "",
[2025-05-26 10:26:54]     "pilotErrorCode": 0,
[2025-05-26 10:26:54]     "pilotErrorDiag": "",
[2025-05-26 10:26:54]  *** Listing of results directory ***
[2025-05-26 10:26:54] total 418608
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc      5111 May 25 14:43 queuedata.json
[2025-05-26 10:26:54] -rwx------ 1 boinc boinc     37140 May 25 14:44 runpilot2-wrapper.sh
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc    495897 May 25 14:44 pilot3.tar.gz
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc       100 May 26 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 10:26:54] -rwxr-xr-x 1 boinc boinc      7986 May 26 08:46 run_atlas
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc       105 May 26 08:46 job.xml
[2025-05-26 10:26:54] -rw-r--r-- 2 boinc boinc 225706993 May 26 08:46 EVNT.44871834._001383.pool.root.1
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc      6923 May 26 08:46 init_data.xml
[2025-05-26 10:26:54] drwxrwx--x 2 boinc boinc      4096 May 26 08:46 shared
[2025-05-26 10:26:54] -rw-r--r-- 2 boinc boinc    508873 May 26 08:46 input.tar.gz
[2025-05-26 10:26:54] -rw-r--r-- 2 boinc boinc     15093 May 26 08:46 start_atlas.sh
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc         0 May 26 08:46 boinc_lockfile
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc      2558 May 26 08:46 pandaJob.out
[2025-05-26 10:26:54] -rw------- 1 boinc boinc    990811 May 26 08:46 agis_schedconf.cvmfs.json
[2025-05-26 10:26:54] -rw------- 1 boinc boinc   1596740 May 26 08:46 agis_ddmendpoints.agis.ALL.json
[2025-05-26 10:26:54] drwx------ 4 boinc boinc      4096 May 26 08:46 pilot3
[2025-05-26 10:26:54] -rw------- 1 boinc boinc        95 May 26 10:25 pilot_heartbeat.json
[2025-05-26 10:26:54] -rw------- 1 boinc boinc 197484718 May 26 10:26 HITS.44871837._034680.pool.root.1
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc       529 May 26 10:26 boinc_task_state.xml
[2025-05-26 10:26:54] -rw------- 1 boinc boinc      1021 May 26 10:26 memory_monitor_summary.json
[2025-05-26 10:26:54] -rw------- 1 boinc boinc    238851 May 26 10:26 log.44871837._034680.job.log.tgz.1
[2025-05-26 10:26:54] -rw------- 1 boinc boinc      7664 May 26 10:26 heartbeat.json
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc      8192 May 26 10:26 boinc_mmap_file
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc        27 May 26 10:26 wrapper_checkpoint.txt
[2025-05-26 10:26:54] -rw------- 1 boinc boinc      4552 May 26 10:26 pilotlog.txt
[2025-05-26 10:26:54] -rw------- 1 boinc boinc    574024 May 26 10:26 log.44871837._034680.job.log.1
[2025-05-26 10:26:54] -rw------- 1 boinc boinc       357 May 26 10:26 output.list
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc       620 May 26 10:26 runtime_log
[2025-05-26 10:26:54] -rw------- 1 boinc boinc    829440 May 26 10:26 result.tar.gz
[2025-05-26 10:26:54] -rw------- 1 boinc boinc       660 May 26 10:26 q4wMDm4sPd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxCUKDmDJ6bWm.diag
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc      8738 May 26 10:26 runtime_log.err
[2025-05-26 10:26:54] -rw-r--r-- 1 boinc boinc     21368 May 26 10:26 stderr.txt
[2025-05-26 10:26:54] HITS file was successfully produced:
[2025-05-26 10:26:54] -rw------- 1 boinc boinc 197484718 May 26 10:26 shared/HITS.pool.root.1
[2025-05-26 10:26:54]  *** Contents of shared directory: ***
[2025-05-26 10:26:54] total 414616
[2025-05-26 10:26:54] -rw-r--r-- 2 boinc boinc 225706993 May 26 08:46 ATLAS.root_0
[2025-05-26 10:26:54] -rw-r--r-- 2 boinc boinc    508873 May 26 08:46 input.tar.gz
[2025-05-26 10:26:54] -rw-r--r-- 2 boinc boinc     15093 May 26 08:46 start_atlas.sh
[2025-05-26 10:26:54] -rw------- 1 boinc boinc 197484718 May 26 10:26 HITS.pool.root.1
[2025-05-26 10:26:54] -rw------- 1 boinc boinc    829440 May 26 10:26 result.tar.gz
10:26:56 (828969): run_atlas exited; CPU time 17350.922299
10:26:56 (828969): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN