Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:24:19 (2766669): wrapper (7.7.26015): starting
00:24:19 (2766669): wrapper: running run_atlas (--nthreads 4)
[2025-05-28 00:24:19] Arguments: --nthreads 4
[2025-05-28 00:24:19] Threads: 4
[2025-05-28 00:24:19] Checking for CVMFS
[2025-05-28 00:24:19] No cvmfs_config command found, will try listing directly
[2025-05-28 00:24:19] CVMFS is ok
[2025-05-28 00:24:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 00:24:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 00:24:19] Further information can be found at the LHC@home message board.
[2025-05-28 00:24:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 00:24:19] Checking for apptainer binary...
[2025-05-28 00:24:19] which: no apptainer in ((null))
[2025-05-28 00:24:19] apptainer is not installed, using version from CVMFS
[2025-05-28 00:24:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 00:24:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-05-28 00:24:19] apptainer works
[2025-05-28 00:24:19] Set ATHENA_PROC_NUMBER=4
[2025-05-28 00:24:19] Set ATHENA_CORE_NUMBER=4
[2025-05-28 00:24:19] Starting ATLAS job with PandaID=6665721967
[2025-05-28 00:24:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 04:25:58]  *** The last 200 lines of the pilot log: ***
[2025-05-28 04:25:58] 2025-05-28 02:25:34,107 | INFO     | executing command: lscpu
[2025-05-28 04:25:58] 2025-05-28 02:25:34,168 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-28 04:25:58] 2025-05-28 02:25:35,389 | INFO     | monitor loop #1039: job 0:6665721967 is in state 'finished'
[2025-05-28 04:25:58] 2025-05-28 02:25:35,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 04:25:58] 2025-05-28 02:25:37,893 | INFO     | monitor loop #1040: job 0:6665721967 is in state 'finished'
[2025-05-28 04:25:58] 2025-05-28 02:25:37,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-28 04:25:58] 2025-05-28 02:25:38,283 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-28 04:25:58] 2025-05-28 02:25:38,284 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6665721967/memory_monitor_summary.json (trf name=prmon)
[2025-05-28 04:25:58] 2025-05-28 02:25:38,285 | INFO     | extracted standard info from prmon json
[2025-05-28 04:25:58] 2025-05-28 02:25:38,285 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 04:25:58] 2025-05-28 02:25:38,285 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 04:25:58] 2025-05-28 02:25:38,285 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 04:25:58] 2025-05-28 02:25:38,285 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 04:25:58] 2025-05-28 02:25:38,291 | INFO     | fitting pss+swap vs Time
[2025-05-28 04:25:58] 2025-05-28 02:25:38,291 | INFO     | sum of square deviations: 4127772278.0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,293 | INFO     | sum of deviations: 8159959873.999997
[2025-05-28 04:25:58] 2025-05-28 02:25:38,293 | INFO     | mean x: 1748391894.0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,293 | INFO     | mean y: 2335924.3164556962
[2025-05-28 04:25:58] 2025-05-28 02:25:38,293 | INFO     | -- intersect: -3453961259.301302
[2025-05-28 04:25:58] 2025-05-28 02:25:38,293 | INFO     | intersect: -3453961259.301302
[2025-05-28 04:25:58] 2025-05-28 02:25:38,294 | INFO     | chi2: 1.4939903090627638
[2025-05-28 04:25:58] 2025-05-28 02:25:38,294 | INFO     | sum of square deviations: 3871990738.0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,296 | INFO     | sum of deviations: 7949790504.499997
[2025-05-28 04:25:58] 2025-05-28 02:25:38,296 | INFO     | mean x: 1748391741.5
[2025-05-28 04:25:58] 2025-05-28 02:25:38,296 | INFO     | mean y: 2335799.047413793
[2025-05-28 04:25:58] 2025-05-28 02:25:38,297 | INFO     | -- intersect: -3587380449.060748
[2025-05-28 04:25:58] 2025-05-28 02:25:38,297 | INFO     | intersect: -3587380449.060748
[2025-05-28 04:25:58] 2025-05-28 02:25:38,297 | INFO     | chi2: 1.4943733501000085
[2025-05-28 04:25:58] 2025-05-28 02:25:38,297 | INFO     | current chi2=1.4943733501000085 (change=-0.025638789952060113 %)
[2025-05-28 04:25:58] 2025-05-28 02:25:38,297 | INFO     | right removable region: 231
[2025-05-28 04:25:58] 2025-05-28 02:25:38,298 | INFO     | sum of square deviations: 3871990738.0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,299 | INFO     | sum of deviations: -24605987331.499996
[2025-05-28 04:25:58] 2025-05-28 02:25:38,300 | INFO     | mean x: 1748392046.5
[2025-05-28 04:25:58] 2025-05-28 02:25:38,300 | INFO     | mean y: 2355258.021551724
[2025-05-28 04:25:58] 2025-05-28 02:25:38,300 | INFO     | -- intersect: 11113154704.018148
[2025-05-28 04:25:58] 2025-05-28 02:25:38,300 | INFO     | intersect: 11113154704.018148
[2025-05-28 04:25:58] 2025-05-28 02:25:38,300 | INFO     | chi2: 0.05373056895911856
[2025-05-28 04:25:58] 2025-05-28 02:25:38,300 | INFO     | current chi2=0.05373056895911856 (change=96.40355304628277 %)
[2025-05-28 04:25:58] 2025-05-28 02:25:38,301 | INFO     | sum of square deviations: 3627000098.0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,302 | INFO     | sum of deviations: -22061481552.0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,302 | INFO     | mean x: 1748392199.0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,303 | INFO     | mean y: 2353658.6607929515
[2025-05-28 04:25:58] 2025-05-28 02:25:38,303 | INFO     | -- intersect: 10637071387.278625
[2025-05-28 04:25:58] 2025-05-28 02:25:38,303 | INFO     | intersect: 10637071387.278625
[2025-05-28 04:25:58] 2025-05-28 02:25:38,303 | INFO     | chi2: 0.04943211983613128
[2025-05-28 04:25:58] 2025-05-28 02:25:38,303 | INFO     | current chi2=0.04943211983613128 (change=8.00000671174318 %)
[2025-05-28 04:25:58] 2025-05-28 02:25:38,303 | INFO     | left removable region: 20
[2025-05-28 04:25:58] 2025-05-28 02:25:38,304 | INFO     | sum of square deviations: 2912836010.0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,305 | INFO     | sum of deviations: -11517871281.999998
[2025-05-28 04:25:58] 2025-05-28 02:25:38,305 | INFO     | mean x: 1748392321.0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,305 | INFO     | mean y: 2346914.2037914693
[2025-05-28 04:25:58] 2025-05-28 02:25:38,306 | INFO     | -- intersect: 6915800893.274594
[2025-05-28 04:25:58] 2025-05-28 02:25:38,306 | INFO     | intersect: 6915800893.274594
[2025-05-28 04:25:58] 2025-05-28 02:25:38,306 | INFO     | chi2: 0.024015082188738796
[2025-05-28 04:25:58] 2025-05-28 02:25:38,306 | INFO     | -- intersect: 6915800893.274594
[2025-05-28 04:25:58] 2025-05-28 02:25:38,306 | INFO     | current memory leak: -3.95 B/s (using 211 data points, chi2=0.02)
[2025-05-28 04:25:58] 2025-05-28 02:25:38,307 | INFO     | ..............................
[2025-05-28 04:25:58] 2025-05-28 02:25:38,307 | INFO     | . Timing measurements:
[2025-05-28 04:25:58] 2025-05-28 02:25:38,307 | INFO     | . get job = 0 s
[2025-05-28 04:25:58] 2025-05-28 02:25:38,307 | INFO     | . initial setup = 1 s
[2025-05-28 04:25:58] 2025-05-28 02:25:38,307 | INFO     | . payload setup = 7 s
[2025-05-28 04:25:58] 2025-05-28 02:25:38,307 | INFO     | . stage-in = 0 s
[2025-05-28 04:25:58] 2025-05-28 02:25:38,307 | INFO     | . payload execution = 14434 s
[2025-05-28 04:25:58] 2025-05-28 02:25:38,308 | INFO     | . stage-out = 1 s
[2025-05-28 04:25:58] 2025-05-28 02:25:38,308 | INFO     | . log creation = 0 s
[2025-05-28 04:25:58] 2025-05-28 02:25:38,308 | INFO     | ..............................
[2025-05-28 04:25:58] 2025-05-28 02:25:38,869 | INFO     | 
[2025-05-28 04:25:58] 2025-05-28 02:25:38,869 | INFO     | job summary report
[2025-05-28 04:25:58] 2025-05-28 02:25:38,869 | INFO     | --------------------------------------------------
[2025-05-28 04:25:58] 2025-05-28 02:25:38,870 | INFO     | PanDA job id: 6665721967
[2025-05-28 04:25:58] 2025-05-28 02:25:38,870 | INFO     | task id: 44871837
[2025-05-28 04:25:58] 2025-05-28 02:25:38,870 | INFO     | errors: (none)
[2025-05-28 04:25:58] 2025-05-28 02:25:38,870 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 04:25:58] 2025-05-28 02:25:38,870 | INFO     | pilot state: finished 
[2025-05-28 04:25:58] 2025-05-28 02:25:38,870 | INFO     | transexitcode: 0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,870 | INFO     | exeerrorcode: 0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,870 | INFO     | exeerrordiag: 
[2025-05-28 04:25:58] 2025-05-28 02:25:38,870 | INFO     | exitcode: 0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,870 | INFO     | exitmsg: OK
[2025-05-28 04:25:58] 2025-05-28 02:25:38,870 | INFO     | cpuconsumptiontime: 55616 s
[2025-05-28 04:25:58] 2025-05-28 02:25:38,870 | INFO     | nevents: 400
[2025-05-28 04:25:58] 2025-05-28 02:25:38,871 | INFO     | neventsw: 0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,871 | INFO     | pid: 2777282
[2025-05-28 04:25:58] 2025-05-28 02:25:38,871 | INFO     | pgrp: 2777282
[2025-05-28 04:25:58] 2025-05-28 02:25:38,871 | INFO     | corecount: 4
[2025-05-28 04:25:58] 2025-05-28 02:25:38,871 | INFO     | event service: False
[2025-05-28 04:25:58] 2025-05-28 02:25:38,871 | INFO     | sizes: {0: 2405074, 1: 2405273, 5: 2405479, 12: 2405535, 14445: 2435892, 14446: 2444855, 14448: 2445039, 14454: 2445209}
[2025-05-28 04:25:58] 2025-05-28 02:25:38,871 | INFO     | --------------------------------------------------
[2025-05-28 04:25:58] 2025-05-28 02:25:38,871 | INFO     | 
[2025-05-28 04:25:58] 2025-05-28 02:25:38,871 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-05-28 04:25:58] 2025-05-28 02:25:38,892 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,892 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,892 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,892 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,892 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,892 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,892 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,893 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,893 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,893 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,893 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,893 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,893 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,893 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,893 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,893 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,893 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,893 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 04:25:58] 2025-05-28 02:25:38,894 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,894 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 04:25:58] 2025-05-28 02:25:38,894 | INFO     | job 6665721967 has completed (purged errors)
[2025-05-28 04:25:58] 2025-05-28 02:25:38,894 | INFO     | overall cleanup function is called
[2025-05-28 04:25:58] 2025-05-28 02:25:39,902 | INFO     | --- collectZombieJob: --- 10, [2777282]
[2025-05-28 04:25:58] 2025-05-28 02:25:39,902 | INFO     | zombie collector waiting for pid 2777282
[2025-05-28 04:25:58] 2025-05-28 02:25:39,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 04:25:58] 2025-05-28 02:25:39,902 | INFO     | collected zombie processes
[2025-05-28 04:25:58] 2025-05-28 02:25:39,902 | INFO     | will attempt to kill all subprocesses of pid=2777282
[2025-05-28 04:25:58] 2025-05-28 02:25:40,228 | INFO     | process IDs to be killed: [2777282] (in reverse order)
[2025-05-28 04:25:58] 2025-05-28 02:25:40,342 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 04:25:58] 2025-05-28 02:25:40,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 04:25:58] 2025-05-28 02:25:40,353 | INFO     | did not find any defunct processes belonging to 2777282
[2025-05-28 04:25:58] 2025-05-28 02:25:40,362 | INFO     | did not find any defunct processes belonging to 2777282
[2025-05-28 04:25:58] 2025-05-28 02:25:40,362 | INFO     | ready for new job
[2025-05-28 04:25:58] 2025-05-28 02:25:40,362 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 04:25:58] 2025-05-28 02:25:40,364 | INFO     | **************************************
[2025-05-28 04:25:58] 2025-05-28 02:25:40,364 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 04:25:58] 2025-05-28 02:25:40,365 | INFO     | **************************************
[2025-05-28 04:25:58] 2025-05-28 02:25:40,365 | INFO     | 
[2025-05-28 04:25:58] 2025-05-28 02:25:40,368 | INFO     | architecture information:
[2025-05-28 04:25:58] 2025-05-28 02:25:40,369 | INFO     | executing command: cat /etc/os-release
[2025-05-28 04:25:58] 2025-05-28 02:25:40,383 | INFO     | cat /etc/os-release:
[2025-05-28 04:25:58] NAME="CentOS Linux"
[2025-05-28 04:25:58] VERSION="7 (Core)"
[2025-05-28 04:25:58] ID="centos"
[2025-05-28 04:25:58] ID_LIKE="rhel fedora"
[2025-05-28 04:25:58] VERSION_ID="7"
[2025-05-28 04:25:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 04:25:58] ANSI_COLOR="0;31"
[2025-05-28 04:25:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 04:25:58] HOME_URL="https://www.centos.org/"
[2025-05-28 04:25:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 04:25:58] 
[2025-05-28 04:25:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 04:25:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 04:25:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 04:25:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 04:25:58] 
[2025-05-28 04:25:58] 2025-05-28 02:25:40,383 | INFO     | **************************************
[2025-05-28 04:25:58] 2025-05-28 02:25:40,884 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-05-28 04:25:58] 2025-05-28 02:25:40,902 | INFO     | sufficient remaining disk space (670585323520 B)
[2025-05-28 04:25:58] 2025-05-28 02:25:40,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 04:25:58] 2025-05-28 02:25:40,903 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 04:25:58] 2025-05-28 02:25:40,903 | INFO     | update_server=False
[2025-05-28 04:25:58] 2025-05-28 02:25:40,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 04:25:58] 2025-05-28 02:25:40,904 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 04:25:58] 2025-05-28 02:25:40,904 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 04:25:58] 2025-05-28 02:25:40,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 04:25:58] 2025-05-28 02:25:40,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 04:25:58] 2025-05-28 02:25:40,928 | INFO     | all job control threads have been joined
[2025-05-28 04:25:58] 2025-05-28 02:25:40,956 | INFO     | all data control threads have been joined
[2025-05-28 04:25:58] 2025-05-28 02:25:41,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 04:25:58] 2025-05-28 02:25:41,401 | INFO     | aborting loop
[2025-05-28 04:25:58] 2025-05-28 02:25:41,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 04:25:58] 2025-05-28 02:25:41,908 | INFO     | [job] retrieve thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:41,934 | INFO     | [job] control thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:41,962 | INFO     | [data] control thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:42,154 | INFO     | [payload] validate_post thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:42,236 | INFO     | all payload control threads have been joined
[2025-05-28 04:25:58] 2025-05-28 02:25:42,378 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:42,406 | INFO     | [job] job monitor thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:42,430 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:42,823 | INFO     | [job] validate thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:42,949 | INFO     | [data] copytool_in thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:43,013 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:43,082 | INFO     | [payload] failed_post thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:43,238 | INFO     | [payload] control thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:43,296 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 04:25:58] 2025-05-28 02:25:43,419 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 04:25:58] 2025-05-28 02:25:43,629 | INFO     | [data] copytool_out thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:44,424 | INFO     | [job] queue monitor thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:47,301 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:51,536 | INFO     | job.realtimelogging is not enabled
[2025-05-28 04:25:58] 2025-05-28 02:25:52,541 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 04:25:58] 2025-05-28 02:25:52,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22758814443328)>', '<ExcThread(monitor, started 22758576588544)>']
[2025-05-28 04:25:58] 2025-05-28 02:25:52,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 04:25:58] 2025-05-28 02:25:52,966 | INFO     | [monitor] control thread has ended
[2025-05-28 04:25:58] 2025-05-28 02:25:57,878 | INFO     | all workflow threads have been joined
[2025-05-28 04:25:58] 2025-05-28 02:25:57,878 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 04:25:58] 2025-05-28 02:25:57,878 | INFO     | traces error code: 0
[2025-05-28 04:25:58] 2025-05-28 02:25:57,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 04:25:58] 2025-05-28 02:25:58,027 [wrapper] ==== pilot stdout END ====
[2025-05-28 04:25:58] 2025-05-28 02:25:58,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 04:25:58] 2025-05-28 02:25:58,033 [wrapper] pilotpid: 2770362
[2025-05-28 04:25:58] 2025-05-28 02:25:58,036 [wrapper] Pilot exit status: 0
[2025-05-28 04:25:58] 2025-05-28 02:25:58,046 [wrapper] pandaids: 6665721967
[2025-05-28 04:25:58] 2025-05-28 02:25:58,109 [wrapper] cleanup supervisor_pilot 3387157 2770363
[2025-05-28 04:25:58] 2025-05-28 02:25:58,112 [wrapper] Test setup, not cleaning
[2025-05-28 04:25:58] 2025-05-28 02:25:58,115 [wrapper] apfmon messages muted
[2025-05-28 04:25:58] 2025-05-28 02:25:58,118 [wrapper] ==== wrapper stdout END ====
[2025-05-28 04:25:58] 2025-05-28 02:25:58,121 [wrapper] ==== wrapper stderr END ====
[2025-05-28 04:25:58]  *** Error codes and diagnostics ***
[2025-05-28 04:25:58]     "exeErrorCode": 0,
[2025-05-28 04:25:58]     "exeErrorDiag": "",
[2025-05-28 04:25:58]     "pilotErrorCode": 0,
[2025-05-28 04:25:58]     "pilotErrorDiag": "",
[2025-05-28 04:25:58]  *** Listing of results directory ***
[2025-05-28 04:25:58] total 418232
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc    495897 May 25 10:37 pilot3.tar.gz
[2025-05-28 04:25:58] -rwx------ 1 boinc boinc     37140 May 25 10:48 runpilot2-wrapper.sh
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc      5111 May 25 10:48 queuedata.json
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc       100 May 28 00:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 04:25:58] -rwxr-xr-x 1 boinc boinc      7986 May 28 00:24 run_atlas
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc       105 May 28 00:24 job.xml
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc      6637 May 28 00:24 init_data.xml
[2025-05-28 04:25:58] -rw-r--r-- 2 boinc boinc 225242078 May 28 00:24 EVNT.44871834._001273.pool.root.1
[2025-05-28 04:25:58] -rw-r--r-- 2 boinc boinc     15093 May 28 00:24 start_atlas.sh
[2025-05-28 04:25:58] drwxrwx--x 2 boinc boinc      4096 May 28 00:24 shared
[2025-05-28 04:25:58] -rw-r--r-- 2 boinc boinc    508880 May 28 00:24 input.tar.gz
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc         0 May 28 00:24 boinc_lockfile
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc      2559 May 28 00:24 pandaJob.out
[2025-05-28 04:25:58] -rw------- 1 boinc boinc    991177 May 28 00:24 agis_schedconf.cvmfs.json
[2025-05-28 04:25:58] drwx------ 4 boinc boinc      4096 May 28 00:24 pilot3
[2025-05-28 04:25:58] -rw------- 1 boinc boinc        95 May 28 04:24 pilot_heartbeat.json
[2025-05-28 04:25:58] -rw------- 1 boinc boinc 195824485 May 28 04:24 HITS.44871837._031944.pool.root.1
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc       531 May 28 04:25 boinc_task_state.xml
[2025-05-28 04:25:58] -rw------- 1 boinc boinc      1033 May 28 04:25 memory_monitor_summary.json
[2025-05-28 04:25:58] -rw------- 1 boinc boinc   1603667 May 28 04:25 agis_ddmendpoints.agis.ALL.json
[2025-05-28 04:25:58] -rw------- 1 boinc boinc    353087 May 28 04:25 log.44871837._031944.job.log.tgz.1
[2025-05-28 04:25:58] -rw------- 1 boinc boinc      7724 May 28 04:25 heartbeat.json
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc      8192 May 28 04:25 boinc_mmap_file
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc        28 May 28 04:25 wrapper_checkpoint.txt
[2025-05-28 04:25:58] -rw------- 1 boinc boinc      4558 May 28 04:25 pilotlog.txt
[2025-05-28 04:25:58] -rw------- 1 boinc boinc   1330800 May 28 04:25 log.44871837._031944.job.log.1
[2025-05-28 04:25:58] -rw------- 1 boinc boinc       357 May 28 04:25 output.list
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc       620 May 28 04:25 runtime_log
[2025-05-28 04:25:58] -rw------- 1 boinc boinc   1699840 May 28 04:25 result.tar.gz
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc      9026 May 28 04:25 runtime_log.err
[2025-05-28 04:25:58] -rw------- 1 boinc boinc       665 May 28 04:25 jtlMDmBDMd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGDOKDmG43rCo.diag
[2025-05-28 04:25:58] -rw-r--r-- 1 boinc boinc     20936 May 28 04:25 stderr.txt
[2025-05-28 04:25:58] HITS file was successfully produced:
[2025-05-28 04:25:58] -rw------- 1 boinc boinc 195824485 May 28 04:24 shared/HITS.pool.root.1
[2025-05-28 04:25:58]  *** Contents of shared directory: ***
[2025-05-28 04:25:58] total 413384
[2025-05-28 04:25:58] -rw-r--r-- 2 boinc boinc 225242078 May 28 00:24 ATLAS.root_0
[2025-05-28 04:25:58] -rw-r--r-- 2 boinc boinc     15093 May 28 00:24 start_atlas.sh
[2025-05-28 04:25:58] -rw-r--r-- 2 boinc boinc    508880 May 28 00:24 input.tar.gz
[2025-05-28 04:25:58] -rw------- 1 boinc boinc 195824485 May 28 04:24 HITS.pool.root.1
[2025-05-28 04:25:58] -rw------- 1 boinc boinc   1699840 May 28 04:25 result.tar.gz
04:25:59 (2766669): run_atlas exited; CPU time 56111.640605
04:25:59 (2766669): called boinc_finish(0)

</stderr_txt>
]]>

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