Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
20:32:56 (166334): wrapper (7.7.26015): starting
20:32:56 (166334): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 20:32:56] Arguments: --nthreads 8
[2025-05-25 20:32:56] Threads: 8
[2025-05-25 20:32:56] Checking for CVMFS
[2025-05-25 20:32:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 20:33:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 20:33:02] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 20:33:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 20:33:02] 2.12.7.0 166565 0 29900 146411 3 1 3837034 6144001 0 130560 0 0 0.000 1290 563 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-05-25 20:33:02] CVMFS is ok
[2025-05-25 20:33:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 20:33:02] Small home clusters do not require a local http proxy but it is suggested if
[2025-05-25 20:33:02] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-05-25 20:33:02] Further information can be found at the LHC@home message board.
[2025-05-25 20:33:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 20:33:02] Checking for apptainer binary...
[2025-05-25 20:33:02] apptainer is not installed, using version from CVMFS
[2025-05-25 20:33:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 20:33:03] debian
[2025-05-25 20:33:03] apptainer works
[2025-05-25 20:33:03] Set ATHENA_PROC_NUMBER=8
[2025-05-25 20:33:03] Set ATHENA_CORE_NUMBER=8
[2025-05-25 20:33:03] Starting ATLAS job with PandaID=6665727756
[2025-05-25 20:33:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/sebastien/BOINC_TEST/BOINC3/BOINC/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:18:56 (190936): wrapper (7.7.26015): starting
22:18:56 (190936): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 22:18:56] Arguments: --nthreads 8
[2025-05-25 22:18:56] Threads: 8
[2025-05-25 22:18:56] This job has been restarted, cleaning up previous attempt
[2025-05-25 22:18:56] Checking for CVMFS
[2025-05-25 22:18:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 22:18:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 22:18:59] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 22:18:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 22:18:59] 2.12.7.0 191188 0 29804 146413 3 1 3996289 6144000 0 130560 0 0 0.000 1290 827 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-05-25 22:18:59] CVMFS is ok
[2025-05-25 22:18:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 22:18:59] Small home clusters do not require a local http proxy but it is suggested if
[2025-05-25 22:18:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-05-25 22:18:59] Further information can be found at the LHC@home message board.
[2025-05-25 22:18:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 22:18:59] Checking for apptainer binary...
[2025-05-25 22:18:59] apptainer is not installed, using version from CVMFS
[2025-05-25 22:18:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 22:18:59] debian
[2025-05-25 22:18:59] apptainer works
[2025-05-25 22:18:59] Set ATHENA_PROC_NUMBER=8
[2025-05-25 22:18:59] Set ATHENA_CORE_NUMBER=8
[2025-05-25 22:18:59] Starting ATLAS job with PandaID=6665727756
[2025-05-25 22:18:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/sebastien/BOINC_TEST/BOINC3/BOINC/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 00:01:14]  *** The last 200 lines of the pilot log: ***
[2025-05-26 00:01:14] 2025-05-25 22:00:50,571 | INFO     | executing command: lscpu
[2025-05-26 00:01:14] 2025-05-25 22:00:50,588 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-26 00:01:14] 2025-05-25 22:00:51,576 | INFO     | monitor loop #448: job 0:6665727756 is in state 'finished'
[2025-05-26 00:01:14] 2025-05-25 22:00:51,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 00:01:14] 2025-05-25 22:00:54,077 | INFO     | monitor loop #449: job 0:6665727756 is in state 'finished'
[2025-05-26 00:01:14] 2025-05-25 22:00:54,077 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-26 00:01:14] 2025-05-25 22:00:55,419 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-26 00:01:14] 2025-05-25 22:00:55,419 | INFO     | using path: /home/sebastien/BOINC_TEST/BOINC3/BOINC/slots/4/PanDA_Pilot-6665727756/memory_monitor_summary.json (trf name=prmon)
[2025-05-26 00:01:14] 2025-05-25 22:00:55,419 | INFO     | extracted standard info from prmon json
[2025-05-26 00:01:14] 2025-05-25 22:00:55,419 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 00:01:14] 2025-05-25 22:00:55,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 00:01:14] 2025-05-25 22:00:55,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 00:01:14] 2025-05-25 22:00:55,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 00:01:14] 2025-05-25 22:00:55,421 | INFO     | fitting pss+swap vs Time
[2025-05-26 00:01:14] 2025-05-25 22:00:55,421 | INFO     | sum of square deviations: 310052325.0
[2025-05-26 00:01:14] 2025-05-25 22:00:55,421 | INFO     | sum of deviations: -12080323764.500002
[2025-05-26 00:01:14] 2025-05-25 22:00:55,421 | INFO     | mean x: 1748207387.5
[2025-05-26 00:01:14] 2025-05-25 22:00:55,421 | INFO     | mean y: 2758179.17
[2025-05-26 00:01:14] 2025-05-25 22:00:55,421 | INFO     | -- intersect: 68116781347.64878
[2025-05-26 00:01:14] 2025-05-25 22:00:55,421 | INFO     | intersect: 68116781347.64878
[2025-05-26 00:01:14] 2025-05-25 22:00:55,421 | INFO     | chi2: 1.622738168239834
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | sum of square deviations: 265828240.0
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | sum of deviations: -9392220508.0
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | mean x: 1748207235.0
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | mean y: 2767456.547368421
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | -- intersect: 61770275095.31809
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | intersect: 61770275095.31809
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | chi2: 1.625770522303713
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | current chi2=1.625770522303713 (change=-0.1868665027561525 %)
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | right removable region: 94
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | sum of square deviations: 265828240.0
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | sum of deviations: -26256121969.0
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | mean x: 1748207540.0
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | mean y: 2805644.010526316
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | -- intersect: 172675018338.06232
[2025-05-26 00:01:14] 2025-05-25 22:00:55,422 | INFO     | intersect: 172675018338.06232
[2025-05-26 00:01:14] 2025-05-25 22:00:55,423 | INFO     | chi2: 0.16565033905589946
[2025-05-26 00:01:14] 2025-05-25 22:00:55,423 | INFO     | current chi2=0.16565033905589946 (change=89.79192439680035 %)
[2025-05-26 00:01:14] 2025-05-25 22:00:55,423 | INFO     | sum of square deviations: 226022842.5
[2025-05-26 00:01:14] 2025-05-25 22:00:55,423 | INFO     | sum of deviations: -24482469803.999992
[2025-05-26 00:01:14] 2025-05-25 22:00:55,423 | INFO     | mean x: 1748207692.5
[2025-05-26 00:01:14] 2025-05-25 22:00:55,423 | INFO     | mean y: 2798816.4444444445
[2025-05-26 00:01:14] 2025-05-25 22:00:55,423 | INFO     | -- intersect: 189366146207.98856
[2025-05-26 00:01:14] 2025-05-25 22:00:55,423 | INFO     | intersect: 189366146207.98856
[2025-05-26 00:01:14] 2025-05-25 22:00:55,423 | INFO     | chi2: 0.14903921632811443
[2025-05-26 00:01:14] 2025-05-25 22:00:55,423 | INFO     | current chi2=0.14903921632811443 (change=10.027822956752013 %)
[2025-05-26 00:01:14] 2025-05-25 22:00:55,423 | INFO     | left removable region: 20
[2025-05-26 00:01:14] 2025-05-25 22:00:55,423 | INFO     | sum of square deviations: 125630262.5
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | sum of deviations: -17326807982.5
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | mean x: 1748207814.5
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | mean y: 2795375.3378378376
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | -- intersect: 241113977606.1915
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | intersect: 241113977606.1915
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | chi2: 0.11675454789916358
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | -- intersect: 241113977606.1915
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | current memory leak: -137.92 B/s (using 74 data points, chi2=0.12)
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | ..............................
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | . Timing measurements:
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | . get job = 0 s
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | . initial setup = 1 s
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | . payload setup = 3 s
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | . stage-in = 0 s
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | . payload execution = 6075 s
[2025-05-26 00:01:14] 2025-05-25 22:00:55,424 | INFO     | . stage-out = 1 s
[2025-05-26 00:01:14] 2025-05-25 22:00:55,425 | INFO     | . log creation = 0 s
[2025-05-26 00:01:14] 2025-05-25 22:00:55,425 | INFO     | ..............................
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | 
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | job summary report
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | --------------------------------------------------
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | PanDA job id: 6665727756
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | task id: 44871837
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | errors: (none)
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | pilot state: finished 
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | transexitcode: 0
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | exeerrorcode: 0
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | exeerrordiag: 
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | exitcode: 0
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | exitmsg: OK
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | cpuconsumptiontime: 45512 s
[2025-05-26 00:01:14] 2025-05-25 22:00:55,463 | INFO     | nevents: 400
[2025-05-26 00:01:14] 2025-05-25 22:00:55,464 | INFO     | neventsw: 0
[2025-05-26 00:01:14] 2025-05-25 22:00:55,464 | INFO     | pid: 201806
[2025-05-26 00:01:14] 2025-05-25 22:00:55,464 | INFO     | pgrp: 201806
[2025-05-26 00:01:14] 2025-05-25 22:00:55,464 | INFO     | corecount: 8
[2025-05-26 00:01:14] 2025-05-25 22:00:55,464 | INFO     | event service: False
[2025-05-26 00:01:14] 2025-05-25 22:00:55,464 | INFO     | sizes: {0: 2393595, 1: 2393794, 2: 2394000, 11: 2394028, 6082: 2420767, 6084: 2429758, 6087: 2429942, 6093: 2430112}
[2025-05-26 00:01:14] 2025-05-25 22:00:55,464 | INFO     | --------------------------------------------------
[2025-05-26 00:01:14] 2025-05-25 22:00:55,464 | INFO     | 
[2025-05-26 00:01:14] 2025-05-25 22:00:55,464 | INFO     | executing command: ls -lF /home/sebastien/BOINC_TEST/BOINC3/BOINC/slots/4
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 00:01:14] 2025-05-25 22:00:55,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 00:01:14] 2025-05-25 22:00:55,475 | INFO     | job 6665727756 has completed (purged errors)
[2025-05-26 00:01:14] 2025-05-25 22:00:55,475 | INFO     | overall cleanup function is called
[2025-05-26 00:01:14] 2025-05-25 22:00:56,477 | INFO     | --- collectZombieJob: --- 10, [201806]
[2025-05-26 00:01:14] 2025-05-25 22:00:56,477 | INFO     | zombie collector waiting for pid 201806
[2025-05-26 00:01:14] 2025-05-25 22:00:56,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 00:01:14] 2025-05-25 22:00:56,478 | INFO     | collected zombie processes
[2025-05-26 00:01:14] 2025-05-25 22:00:56,478 | INFO     | will attempt to kill all subprocesses of pid=201806
[2025-05-26 00:01:14] 2025-05-25 22:00:56,552 | INFO     | process IDs to be killed: [201806] (in reverse order)
[2025-05-26 00:01:14] 2025-05-25 22:00:56,577 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 00:01:14] 2025-05-25 22:00:56,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 00:01:14] 2025-05-25 22:00:56,579 | INFO     | did not find any defunct processes belonging to 201806
[2025-05-26 00:01:14] 2025-05-25 22:00:56,580 | INFO     | did not find any defunct processes belonging to 201806
[2025-05-26 00:01:14] 2025-05-25 22:00:56,580 | INFO     | ready for new job
[2025-05-26 00:01:14] 2025-05-25 22:00:56,580 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 00:01:14] 2025-05-25 22:00:56,581 | INFO     | **************************************
[2025-05-26 00:01:14] 2025-05-25 22:00:56,581 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 00:01:14] 2025-05-25 22:00:56,581 | INFO     | **************************************
[2025-05-26 00:01:14] 2025-05-25 22:00:56,581 | INFO     | 
[2025-05-26 00:01:14] 2025-05-25 22:00:56,581 | INFO     | architecture information:
[2025-05-26 00:01:14] 2025-05-25 22:00:56,582 | INFO     | executing command: cat /etc/os-release
[2025-05-26 00:01:14] 2025-05-25 22:00:56,588 | INFO     | cat /etc/os-release:
[2025-05-26 00:01:14] NAME="CentOS Linux"
[2025-05-26 00:01:14] VERSION="7 (Core)"
[2025-05-26 00:01:14] ID="centos"
[2025-05-26 00:01:14] ID_LIKE="rhel fedora"
[2025-05-26 00:01:14] VERSION_ID="7"
[2025-05-26 00:01:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 00:01:14] ANSI_COLOR="0;31"
[2025-05-26 00:01:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 00:01:14] HOME_URL="https://www.centos.org/"
[2025-05-26 00:01:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 00:01:14] 
[2025-05-26 00:01:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 00:01:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 00:01:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 00:01:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 00:01:14] 
[2025-05-26 00:01:14] 2025-05-25 22:00:56,588 | INFO     | **************************************
[2025-05-26 00:01:14] 2025-05-25 22:00:57,091 | INFO     | executing command: df -mP /home/sebastien/BOINC_TEST/BOINC3/BOINC/slots/4
[2025-05-26 00:01:14] 2025-05-25 22:00:57,102 | INFO     | sufficient remaining disk space (18169724928 B)
[2025-05-26 00:01:14] 2025-05-25 22:00:57,102 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 00:01:14] 2025-05-25 22:00:57,102 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 00:01:14] 2025-05-25 22:00:57,102 | INFO     | update_server=False
[2025-05-26 00:01:14] 2025-05-25 22:00:57,102 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 00:01:14] 2025-05-25 22:00:57,102 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 00:01:14] 2025-05-25 22:00:57,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 00:01:14] 2025-05-25 22:00:57,169 | INFO     | all job control threads have been joined
[2025-05-26 00:01:14] 2025-05-25 22:00:57,252 | INFO     | all data control threads have been joined
[2025-05-26 00:01:14] 2025-05-25 22:00:57,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 00:01:14] 2025-05-25 22:00:57,586 | INFO     | aborting loop
[2025-05-26 00:01:14] 2025-05-25 22:00:57,695 | INFO     | PID=195241 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-26 00:01:14] 2025-05-25 22:00:57,695 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 00:01:14] 2025-05-25 22:00:57,695 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 00:01:14] 2025-05-25 22:00:57,695 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 00:01:14] 2025-05-25 22:00:58,095 | INFO     | all payload control threads have been joined
[2025-05-26 00:01:14] 2025-05-25 22:00:58,108 | INFO     | [job] retrieve thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:58,108 | INFO     | [job] queue monitor thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:58,175 | INFO     | [job] control thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:58,257 | INFO     | [data] control thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:58,367 | INFO     | [payload] validate_post thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:58,590 | INFO     | [job] job monitor thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:58,894 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:58,919 | INFO     | [payload] failed_post thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:59,018 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:59,101 | INFO     | [payload] control thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:59,108 | INFO     | [data] copytool_out thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:59,149 | INFO     | [job] validate thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:59,208 | INFO     | [data] copytool_in thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:59,427 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:00:59,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 00:01:14] 2025-05-25 22:01:03,762 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:01:07,299 | INFO     | job.realtimelogging is not enabled
[2025-05-26 00:01:14] 2025-05-25 22:01:08,305 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 00:01:14] 2025-05-25 22:01:09,368 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140443860961088)>', '<ExcThread(monitor, started 140443501172480)>']
[2025-05-26 00:01:14] 2025-05-25 22:01:09,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 00:01:14] 2025-05-25 22:01:09,750 | INFO     | [monitor] control thread has ended
[2025-05-26 00:01:14] 2025-05-25 22:01:14,390 | INFO     | all workflow threads have been joined
[2025-05-26 00:01:14] 2025-05-25 22:01:14,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 00:01:14] 2025-05-25 22:01:14,390 | INFO     | traces error code: 0
[2025-05-26 00:01:14] 2025-05-25 22:01:14,391 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 00:01:14] 2025-05-25 22:01:14,513 [wrapper] ==== pilot stdout END ====
[2025-05-26 00:01:14] 2025-05-25 22:01:14,514 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 00:01:14] 2025-05-25 22:01:14,515 [wrapper] pilotpid: 195241
[2025-05-26 00:01:14] 2025-05-25 22:01:14,517 [wrapper] Pilot exit status: 0
[2025-05-26 00:01:14] 2025-05-25 22:01:14,532 [wrapper] pandaids: 6665727756 6665727756
[2025-05-26 00:01:14] 2025-05-25 22:01:14,545 [wrapper] cleanup supervisor_pilot  214547 195242
[2025-05-26 00:01:14] 2025-05-25 22:01:14,547 [wrapper] Test setup, not cleaning
[2025-05-26 00:01:14] 2025-05-25 22:01:14,548 [wrapper] apfmon messages muted
[2025-05-26 00:01:14] 2025-05-25 22:01:14,550 [wrapper] ==== wrapper stdout END ====
[2025-05-26 00:01:14] 2025-05-25 22:01:14,551 [wrapper] ==== wrapper stderr END ====
[2025-05-26 00:01:14]  *** Error codes and diagnostics ***
[2025-05-26 00:01:14]     "exeErrorCode": 0,
[2025-05-26 00:01:14]     "exeErrorDiag": "",
[2025-05-26 00:01:14]     "pilotErrorCode": 0,
[2025-05-26 00:01:14]     "pilotErrorDiag": "",
[2025-05-26 00:01:14]  *** Listing of results directory ***
[2025-05-26 00:01:14] total 636752
[2025-05-26 00:01:14] drwx------ 4 sebastien sebastien      4096  3 avril 10:00 pilot3
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien    495897 25 mai   13:39 pilot3.tar.gz
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien      5111 25 mai   13:54 queuedata.json
[2025-05-26 00:01:14] -rwx------ 1 sebastien sebastien     37140 25 mai   13:54 runpilot2-wrapper.sh
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien       100 25 mai   20:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 00:01:14] -rwxr-xr-x 1 sebastien sebastien      7986 25 mai   20:32 run_atlas
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien       105 25 mai   20:32 job.xml
[2025-05-26 00:01:14] -rw-r--r-- 2 sebastien sebastien     15093 25 mai   20:32 start_atlas.sh
[2025-05-26 00:01:14] drwxrwx--x 2 sebastien sebastien      4096 25 mai   20:32 shared
[2025-05-26 00:01:14] -rw-r--r-- 2 sebastien sebastien    508878 25 mai   20:32 input.tar.gz
[2025-05-26 00:01:14] -rw-r--r-- 3 sebastien sebastien 223515216 25 mai   20:32 EVNT.44871834._001363.pool.root.1
[2025-05-26 00:01:14] -rw-r--r-- 3 sebastien sebastien 223515216 25 mai   20:32 ATLAS.root_0
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien         0 25 mai   20:32 boinc_lockfile
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien      6737 25 mai   22:18 init_data.xml
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien      2559 25 mai   22:18 pandaJob.out
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien    990803 25 mai   22:19 agis_schedconf.cvmfs.json
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien 199356883 26 mai   00:00 HITS.44871837._034181.pool.root.1
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien       530 26 mai   00:00 boinc_task_state.xml
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien        97 26 mai   00:00 pilot_heartbeat.json
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien      1015 26 mai   00:00 memory_monitor_summary.json
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien   1596740 26 mai   00:00 agis_ddmendpoints.agis.ALL.json
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien    314541 26 mai   00:00 log.44871837._034181.job.log.tgz.1
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien      7657 26 mai   00:00 heartbeat.json
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien      8192 26 mai   00:01 boinc_mmap_file
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien      4768 26 mai   00:01 pilotlog.txt
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien    588013 26 mai   00:01 log.44871837._034181.job.log.1
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien        28 26 mai   00:01 wrapper_checkpoint.txt
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien       357 26 mai   00:01 output.list
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien       620 26 mai   00:01 runtime_log
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien    921600 26 mai   00:01 result.tar.gz
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien      9162 26 mai   00:01 runtime_log.err
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien       805 26 mai   00:01 hhpNDm26Od7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8SOKDm3Nd9Mo.diag
[2025-05-26 00:01:14] -rw-r--r-- 1 sebastien sebastien     23564 26 mai   00:01 stderr.txt
[2025-05-26 00:01:14] HITS file was successfully produced:
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien 199356883 26 mai   00:00 shared/HITS.pool.root.1
[2025-05-26 00:01:14]  *** Contents of shared directory: ***
[2025-05-26 00:01:14] total 414392
[2025-05-26 00:01:14] -rw-r--r-- 2 sebastien sebastien     15093 25 mai   20:32 start_atlas.sh
[2025-05-26 00:01:14] -rw-r--r-- 2 sebastien sebastien    508878 25 mai   20:32 input.tar.gz
[2025-05-26 00:01:14] -rw-r--r-- 3 sebastien sebastien 223515216 25 mai   20:32 ATLAS.root_0
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien 199356883 26 mai   00:00 HITS.pool.root.1
[2025-05-26 00:01:14] -rw------- 1 sebastien sebastien    921600 26 mai   00:01 result.tar.gz
00:01:16 (190936): run_atlas exited; CPU time 45584.068757
00:01:16 (190936): called boinc_finish(0)

</stderr_txt>
]]>

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