Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:41:39 (18357): wrapper (7.7.26015): starting
00:41:39 (18357): wrapper: running run_atlas (--nthreads 8)
[2025-05-26 00:41:39] Arguments: --nthreads 8
[2025-05-26 00:41:39] Threads: 8
[2025-05-26 00:41:39] Checking for CVMFS
[2025-05-26 00:41:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 00:41:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 00:41:40] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 00:41:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 00:41:41] 2.11.2.0 22299 19421 91716 146417 1 18 19555152 25165825 3057 130560 0 11293979 99.703 14009054 1780 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-26 00:41:41] CVMFS is ok
[2025-05-26 00:41:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 00:41:41] Checking for apptainer binary...
[2025-05-26 00:41:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 00:41:41] Running /usr/bin/apptainer --version
[2025-05-26 00:41:41] apptainer version 1.3.2-1.el7
[2025-05-26 00:41:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 00:41:54] cg-vwn422.simple-grid.lan
[2025-05-26 00:41:54] apptainer works
[2025-05-26 00:41:54] Set ATHENA_PROC_NUMBER=8
[2025-05-26 00:41:54] Set ATHENA_CORE_NUMBER=8
[2025-05-26 00:41:54] Starting ATLAS job with PandaID=6665726561
[2025-05-26 00:41:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 06:19:42]  *** The last 200 lines of the pilot log: ***
[2025-05-26 06:19:42] 2025-05-26 04:06:22,110 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 06:19:42] 2025-05-26 04:06:22,110 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 06:19:42] 2025-05-26 04:06:22,111 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 06:19:42] 2025-05-26 04:06:22,111 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 06:19:42] 2025-05-26 04:06:22,117 | INFO     | fitting pss+swap vs Time
[2025-05-26 06:19:42] 2025-05-26 04:06:22,118 | INFO     | sum of square deviations: 8971993338.0
[2025-05-26 06:19:42] 2025-05-26 04:06:22,121 | INFO     | sum of deviations: 144273263365.00003
[2025-05-26 06:19:42] 2025-05-26 04:06:22,121 | INFO     | mean x: 1748222917.0
[2025-05-26 06:19:42] 2025-05-26 04:06:22,121 | INFO     | mean y: 2441241.9153094464
[2025-05-26 06:19:42] 2025-05-26 04:06:22,121 | INFO     | -- intersect: -28109686779.492012
[2025-05-26 06:19:42] 2025-05-26 04:06:22,121 | INFO     | intersect: -28109686779.492012
[2025-05-26 06:19:42] 2025-05-26 04:06:22,122 | INFO     | chi2: 7.1164625544851985
[2025-05-26 06:19:42] 2025-05-26 04:06:22,123 | INFO     | sum of square deviations: 8540720135.5
[2025-05-26 06:19:42] 2025-05-26 04:06:22,126 | INFO     | sum of deviations: 161899065897.49994
[2025-05-26 06:19:42] 2025-05-26 04:06:22,126 | INFO     | mean x: 1748222764.5
[2025-05-26 06:19:42] 2025-05-26 04:06:22,126 | INFO     | mean y: 2447379.7317880793
[2025-05-26 06:19:42] 2025-05-26 04:06:22,126 | INFO     | -- intersect: -33137103859.845886
[2025-05-26 06:19:42] 2025-05-26 04:06:22,126 | INFO     | intersect: -33137103859.845886
[2025-05-26 06:19:42] 2025-05-26 04:06:22,126 | INFO     | chi2: 6.3908306987891805
[2025-05-26 06:19:42] 2025-05-26 04:06:22,127 | INFO     | current chi2=6.3908306987891805 (change=10.196524609529261 %)
[2025-05-26 06:19:42] 2025-05-26 04:06:22,127 | INFO     | right removable region: 301
[2025-05-26 06:19:42] 2025-05-26 04:06:22,127 | INFO     | sum of square deviations: 8540720135.5
[2025-05-26 06:19:42] 2025-05-26 04:06:22,137 | INFO     | sum of deviations: 36908745918.5
[2025-05-26 06:19:42] 2025-05-26 04:06:22,138 | INFO     | mean x: 1748223069.5
[2025-05-26 06:19:42] 2025-05-26 04:06:22,138 | INFO     | mean y: 2479186.831125828
[2025-05-26 06:19:42] 2025-05-26 04:06:22,138 | INFO     | -- intersect: -7552471690.535164
[2025-05-26 06:19:42] 2025-05-26 04:06:22,138 | INFO     | intersect: -7552471690.535164
[2025-05-26 06:19:42] 2025-05-26 04:06:22,138 | INFO     | chi2: 2.313410674293651
[2025-05-26 06:19:42] 2025-05-26 04:06:22,139 | INFO     | current chi2=2.313410674293651 (change=67.49212608677878 %)
[2025-05-26 06:19:42] 2025-05-26 04:06:22,139 | INFO     | sum of square deviations: 8123493708.0
[2025-05-26 06:19:42] 2025-05-26 04:06:22,142 | INFO     | sum of deviations: -16996501857.999998
[2025-05-26 06:19:42] 2025-05-26 04:06:22,142 | INFO     | mean x: 1748223222.0
[2025-05-26 06:19:42] 2025-05-26 04:06:22,142 | INFO     | mean y: 2498795.703703704
[2025-05-26 06:19:42] 2025-05-26 04:06:22,142 | INFO     | -- intersect: 3660245118.7740073
[2025-05-26 06:19:42] 2025-05-26 04:06:22,142 | INFO     | intersect: 3660245118.7740073
[2025-05-26 06:19:42] 2025-05-26 04:06:22,143 | INFO     | chi2: 0.8663168671598042
[2025-05-26 06:19:42] 2025-05-26 04:06:22,143 | INFO     | current chi2=0.8663168671598042 (change=62.55239604510275 %)
[2025-05-26 06:19:42] 2025-05-26 04:06:22,144 | INFO     | sum of square deviations: 7720081493.0
[2025-05-26 06:19:42] 2025-05-26 04:06:22,146 | INFO     | sum of deviations: -19643795565.499996
[2025-05-26 06:19:42] 2025-05-26 04:06:22,147 | INFO     | mean x: 1748223374.5
[2025-05-26 06:19:42] 2025-05-26 04:06:22,147 | INFO     | mean y: 2499776.5171232875
[2025-05-26 06:19:42] 2025-05-26 04:06:22,147 | INFO     | -- intersect: 4450865069.376414
[2025-05-26 06:19:42] 2025-05-26 04:06:22,147 | INFO     | intersect: 4450865069.376414
[2025-05-26 06:19:42] 2025-05-26 04:06:22,147 | INFO     | chi2: 0.8475537483945025
[2025-05-26 06:19:42] 2025-05-26 04:06:22,147 | INFO     | current chi2=0.8475537483945025 (change=2.1658494110608792 %)
[2025-05-26 06:19:42] 2025-05-26 04:06:22,148 | INFO     | left removable region: 30
[2025-05-26 06:19:42] 2025-05-26 04:06:22,148 | INFO     | sum of square deviations: 6171352920.0
[2025-05-26 06:19:42] 2025-05-26 04:06:22,151 | INFO     | sum of deviations: 10079763769.000002
[2025-05-26 06:19:42] 2025-05-26 04:06:22,151 | INFO     | mean x: 1748223649.0
[2025-05-26 06:19:42] 2025-05-26 04:06:22,151 | INFO     | mean y: 2503040.3394833948
[2025-05-26 06:19:42] 2025-05-26 04:06:22,151 | INFO     | -- intersect: -2852897003.3350854
[2025-05-26 06:19:42] 2025-05-26 04:06:22,151 | INFO     | intersect: -2852897003.3350854
[2025-05-26 06:19:42] 2025-05-26 04:06:22,151 | INFO     | chi2: 0.000569478319339933
[2025-05-26 06:19:42] 2025-05-26 04:06:22,152 | INFO     | -- intersect: -2852897003.3350854
[2025-05-26 06:19:42] 2025-05-26 04:06:22,152 | INFO     | current memory leak: 1.63 B/s (using 271 data points, chi2=0.00)
[2025-05-26 06:19:42] 2025-05-26 04:06:22,152 | INFO     | ..............................
[2025-05-26 06:19:42] 2025-05-26 04:06:22,153 | INFO     | . Timing measurements:
[2025-05-26 06:19:42] 2025-05-26 04:06:22,153 | INFO     | . get job = 0 s
[2025-05-26 06:19:42] 2025-05-26 04:06:22,153 | INFO     | . initial setup = 5 s
[2025-05-26 06:19:42] 2025-05-26 04:06:22,153 | INFO     | . payload setup = 152 s
[2025-05-26 06:19:42] 2025-05-26 04:06:22,153 | INFO     | . stage-in = 0 s
[2025-05-26 06:19:42] 2025-05-26 04:06:22,153 | INFO     | . payload execution = 18828 s
[2025-05-26 06:19:42] 2025-05-26 04:06:22,153 | INFO     | . stage-out = 5 s
[2025-05-26 06:19:42] 2025-05-26 04:06:22,153 | INFO     | . log creation = 1 s
[2025-05-26 06:19:42] 2025-05-26 04:06:22,153 | INFO     | ..............................
[2025-05-26 06:19:42] 2025-05-26 04:06:22,268 | INFO     | 
[2025-05-26 06:19:42] 2025-05-26 04:06:22,268 | INFO     | job summary report
[2025-05-26 06:19:42] 2025-05-26 04:06:22,268 | INFO     | --------------------------------------------------
[2025-05-26 06:19:42] 2025-05-26 04:06:22,268 | INFO     | PanDA job id: 6665726561
[2025-05-26 06:19:42] 2025-05-26 04:06:22,268 | INFO     | task id: 44871837
[2025-05-26 06:19:42] 2025-05-26 04:06:22,269 | INFO     | errors: (none)
[2025-05-26 06:19:42] 2025-05-26 04:06:22,269 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 06:19:42] 2025-05-26 04:06:22,269 | INFO     | pilot state: finished 
[2025-05-26 06:19:42] 2025-05-26 04:06:22,269 | INFO     | transexitcode: 0
[2025-05-26 06:19:42] 2025-05-26 04:06:22,269 | INFO     | exeerrorcode: 0
[2025-05-26 06:19:42] 2025-05-26 04:06:22,269 | INFO     | exeerrordiag: 
[2025-05-26 06:19:42] 2025-05-26 04:06:22,269 | INFO     | exitcode: 0
[2025-05-26 06:19:42] 2025-05-26 04:06:22,269 | INFO     | exitmsg: OK
[2025-05-26 06:19:42] 2025-05-26 04:06:22,269 | INFO     | cpuconsumptiontime: 71367 s
[2025-05-26 06:19:42] 2025-05-26 04:06:22,269 | INFO     | nevents: 400
[2025-05-26 06:19:42] 2025-05-26 04:06:22,270 | INFO     | neventsw: 0
[2025-05-26 06:19:42] 2025-05-26 04:06:22,270 | INFO     | pid: 2399
[2025-05-26 06:19:42] 2025-05-26 04:06:22,270 | INFO     | pgrp: 2399
[2025-05-26 06:19:42] 2025-05-26 04:06:22,270 | INFO     | corecount: 8
[2025-05-26 06:19:42] 2025-05-26 04:06:22,270 | INFO     | event service: False
[2025-05-26 06:19:42] 2025-05-26 04:06:22,270 | INFO     | sizes: {0: 2392913, 1: 2393769, 2: 2393769, 12: 2393797, 23: 2393825, 34: 2393853, 44: 2394009, 55: 2394037, 66: 2394065, 77: 2394093, 87: 2394149, 96: 2394663, 98
[2025-05-26 06:19:42] 2025-05-26 04:06:22,270 | INFO     | --------------------------------------------------
[2025-05-26 06:19:42] 2025-05-26 04:06:22,270 | INFO     | 
[2025-05-26 06:19:42] 2025-05-26 04:06:22,271 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-05-26 06:19:42] 2025-05-26 04:06:22,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,726 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,726 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 06:19:42] 2025-05-26 04:06:22,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,726 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 06:19:42] 2025-05-26 04:06:22,726 | INFO     | job 6665726561 has completed (purged errors)
[2025-05-26 06:19:42] 2025-05-26 04:06:22,726 | INFO     | overall cleanup function is called
[2025-05-26 06:19:42] 2025-05-26 04:06:23,735 | INFO     | --- collectZombieJob: --- 10, [2399]
[2025-05-26 06:19:42] 2025-05-26 04:06:23,735 | INFO     | zombie collector waiting for pid 2399
[2025-05-26 06:19:42] 2025-05-26 04:06:23,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 06:19:42] 2025-05-26 04:06:23,735 | INFO     | collected zombie processes
[2025-05-26 06:19:42] 2025-05-26 04:06:23,735 | INFO     | will attempt to kill all subprocesses of pid=2399
[2025-05-26 06:19:42] 2025-05-26 04:06:23,862 | INFO     | process IDs to be killed: [2399] (in reverse order)
[2025-05-26 06:19:42] 2025-05-26 04:06:24,550 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 06:19:42] 2025-05-26 04:06:24,551 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 06:19:42] 2025-05-26 04:06:24,554 | INFO     | did not find any defunct processes belonging to 2399
[2025-05-26 06:19:42] 2025-05-26 04:06:24,556 | INFO     | did not find any defunct processes belonging to 2399
[2025-05-26 06:19:42] 2025-05-26 04:06:24,557 | INFO     | ready for new job
[2025-05-26 06:19:42] 2025-05-26 04:06:24,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 06:19:42] 2025-05-26 04:06:24,561 | INFO     | **************************************
[2025-05-26 06:19:42] 2025-05-26 04:06:24,561 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 06:19:42] 2025-05-26 04:06:24,561 | INFO     | **************************************
[2025-05-26 06:19:42] 2025-05-26 04:06:24,561 | INFO     | 
[2025-05-26 06:19:42] 2025-05-26 04:06:24,562 | INFO     | pilot is running in a VM
[2025-05-26 06:19:42] 2025-05-26 04:06:24,562 | INFO     | architecture information:
[2025-05-26 06:19:42] 2025-05-26 04:06:24,576 | INFO     | executing command: cat /etc/os-release
[2025-05-26 06:19:42] 2025-05-26 04:06:24,794 | INFO     | cat /etc/os-release:
[2025-05-26 06:19:42] NAME="CentOS Linux"
[2025-05-26 06:19:42] VERSION="7 (Core)"
[2025-05-26 06:19:42] ID="centos"
[2025-05-26 06:19:42] ID_LIKE="rhel fedora"
[2025-05-26 06:19:42] VERSION_ID="7"
[2025-05-26 06:19:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 06:19:42] ANSI_COLOR="0;31"
[2025-05-26 06:19:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 06:19:42] HOME_URL="https://www.centos.org/"
[2025-05-26 06:19:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 06:19:42] 
[2025-05-26 06:19:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 06:19:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 06:19:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 06:19:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 06:19:42] 
[2025-05-26 06:19:42] 2025-05-26 04:06:24,795 | INFO     | **************************************
[2025-05-26 06:19:42] 2025-05-26 04:06:25,298 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-05-26 06:19:42] 2025-05-26 04:06:25,536 | INFO     | sufficient remaining disk space (491577671680 B)
[2025-05-26 06:19:42] 2025-05-26 04:06:25,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 06:19:42] 2025-05-26 04:06:25,536 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 06:19:42] 2025-05-26 04:06:25,536 | INFO     | update_server=False
[2025-05-26 06:19:42] 2025-05-26 04:06:25,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 06:19:42] 2025-05-26 04:06:25,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 06:19:42] 2025-05-26 04:06:25,809 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-26 06:19:42] 2025-05-26 04:06:25,809 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-26 06:19:42] 2025-05-26 04:06:25,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 06:19:42] 2025-05-26 04:06:25,809 | INFO     | will abort loop
[2025-05-26 06:19:42] 2025-05-26 04:06:25,896 | INFO     | all job control threads have been joined
[2025-05-26 06:19:42] 2025-05-26 04:06:25,898 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 06:19:42] 2025-05-26 04:06:25,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 06:19:42] 2025-05-26 04:06:25,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 06:19:42] 2025-05-26 04:06:26,212 | INFO     | all data control threads have been joined
[2025-05-26 06:19:42] 2025-05-26 04:06:26,542 | INFO     | [job] retrieve thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:26,665 | INFO     | [payload] failed_post thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:26,751 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:26,815 | INFO     | [job] job monitor thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:26,901 | INFO     | [job] control thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:26,992 | INFO     | all payload control threads have been joined
[2025-05-26 06:19:42] 2025-05-26 04:06:27,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 06:19:42] 2025-05-26 04:06:27,218 | INFO     | [data] control thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:27,247 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:27,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 06:19:42] 2025-05-26 04:06:27,493 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:27,506 | INFO     | [payload] validate_post thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:27,538 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:27,618 | INFO     | [data] copytool_in thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:27,620 | INFO     | [data] copytool_out thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:27,913 | INFO     | [job] validate thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:27,998 | INFO     | [payload] control thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:28,291 | INFO     | [job] queue monitor thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:31,123 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 06:19:42] 2025-05-26 04:06:32,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071784580928)>', '<ExcThread(monitor, started 140071348983552)>']
[2025-05-26 06:19:42] 2025-05-26 04:06:32,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 06:19:42] 2025-05-26 04:06:32,941 | INFO     | [monitor] control thread has ended
[2025-05-26 06:19:42] 2025-05-26 04:06:37,692 | INFO     | all workflow threads have been joined
[2025-05-26 06:19:42] 2025-05-26 04:06:37,692 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 06:19:42] 2025-05-26 04:06:37,692 | INFO     | traces error code: 0
[2025-05-26 06:19:42] 2025-05-26 04:06:37,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 06:19:42] 2025-05-26 04:06:37,967 [wrapper] ==== pilot stdout END ====
[2025-05-26 06:19:42] 2025-05-26 04:06:38,066 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 06:19:42] 2025-05-26 04:06:38,202 [wrapper] pilotpid: 27137
[2025-05-26 06:19:42] 2025-05-26 04:06:38,291 [wrapper] Pilot exit status: 0
[2025-05-26 06:19:42] 2025-05-26 04:06:38,701 [wrapper] pandaids: 6665726561
[2025-05-26 06:19:42] 2025-05-26 04:06:39,478 [wrapper] cleanup supervisor_pilot  7484 27138
[2025-05-26 06:19:42] 2025-05-26 04:06:39,561 [wrapper] Test setup, not cleaning
[2025-05-26 06:19:42] 2025-05-26 04:06:39,654 [wrapper] apfmon messages muted
[2025-05-26 06:19:42] 2025-05-26 04:06:39,715 [wrapper] ==== wrapper stdout END ====
[2025-05-26 06:19:42] 2025-05-26 04:06:39,808 [wrapper] ==== wrapper stderr END ====
[2025-05-26 06:19:42]  *** Error codes and diagnostics ***
[2025-05-26 06:19:42]     "exeErrorCode": 0,
[2025-05-26 06:19:42]     "exeErrorDiag": "",
[2025-05-26 06:19:42]     "pilotErrorCode": 0,
[2025-05-26 06:19:42]     "pilotErrorDiag": "",
[2025-05-26 06:19:42]  *** Listing of results directory ***
[2025-05-26 06:19:42] total 425572
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc    495897 May 25 12:45 pilot3.tar.gz
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc      5111 May 25 13:25 queuedata.json
[2025-05-26 06:19:42] -rwx------. 1 boinc boinc     37140 May 25 13:25 runpilot2-wrapper.sh
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc       100 May 26 00:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 06:19:42] -rwxr-xr-x. 1 boinc boinc      7986 May 26 00:41 run_atlas
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc       105 May 26 00:41 job.xml
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc      6371 May 26 00:41 init_data.xml
[2025-05-26 06:19:42] -rw-r--r--. 2 boinc boinc 227315392 May 26 00:41 EVNT.44871834._001344.pool.root.1
[2025-05-26 06:19:42] -rw-r--r--. 2 boinc boinc     15093 May 26 00:41 start_atlas.sh
[2025-05-26 06:19:42] drwxrwx--x. 2 boinc boinc        68 May 26 00:41 shared
[2025-05-26 06:19:42] -rw-r--r--. 2 boinc boinc    508875 May 26 00:41 input.tar.gz
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc         0 May 26 00:41 boinc_lockfile
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc      2559 May 26 00:41 pandaJob.out
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc    990803 May 26 00:44 agis_schedconf.cvmfs.json
[2025-05-26 06:19:42] drwx------. 4 boinc boinc      4096 May 26 00:44 pilot3
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc 200535472 May 26 06:03 HITS.44871837._033703.pool.root.1
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc       531 May 26 06:03 boinc_task_state.xml
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc      1016 May 26 06:04 memory_monitor_summary.json
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc   1596740 May 26 06:04 agis_ddmendpoints.agis.ALL.json
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc    423354 May 26 06:04 log.44871837._033703.job.log.tgz.1
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc        95 May 26 06:05 pilot_heartbeat.json
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc      7692 May 26 06:06 heartbeat.json
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc      4602 May 26 06:06 pilotlog.txt
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc   1634059 May 26 06:06 log.44871837._033703.job.log.1
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc       357 May 26 06:06 output.list
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc       620 May 26 06:06 runtime_log
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc   2078720 May 26 06:06 result.tar.gz
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc      8659 May 26 06:06 runtime_log.err
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc       657 May 26 06:06 7QuKDm1eOd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmd2TKDmfRzJ5n.diag
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc      8192 May 26 06:19 boinc_mmap_file
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc        28 May 26 06:19 wrapper_checkpoint.txt
[2025-05-26 06:19:42] -rw-r--r--. 1 boinc boinc     20507 May 26 06:19 stderr.txt
[2025-05-26 06:19:42] HITS file was successfully produced:
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc 200535472 May 26 06:03 shared/HITS.pool.root.1
[2025-05-26 06:19:42]  *** Contents of shared directory: ***
[2025-05-26 06:19:42] total 420372
[2025-05-26 06:19:42] -rw-r--r--. 2 boinc boinc 227315392 May 26 00:41 ATLAS.root_0
[2025-05-26 06:19:42] -rw-r--r--. 2 boinc boinc     15093 May 26 00:41 start_atlas.sh
[2025-05-26 06:19:42] -rw-r--r--. 2 boinc boinc    508875 May 26 00:41 input.tar.gz
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc 200535472 May 26 06:03 HITS.pool.root.1
[2025-05-26 06:19:42] -rw-------. 1 boinc boinc   2078720 May 26 06:06 result.tar.gz
06:19:44 (18357): run_atlas exited; CPU time 71633.151183
06:19:44 (18357): called boinc_finish(0)

</stderr_txt>
]]>

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