Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:45:21 (3582677): wrapper (7.7.26015): starting
12:45:21 (3582677): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 12:45:21] Arguments: --nthreads 8
[2025-05-25 12:45:21] Threads: 8
[2025-05-25 12:45:21] Checking for CVMFS
[2025-05-25 12:45:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 12:45:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 12:45:22] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 12:45:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 12:45:22] 2.12.6.0 4868 23170 369964 146408 0 567 18958637 32935937 35317 16776704 0 197941688 99.670 173480975 21940 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 12:45:22] CVMFS is ok
[2025-05-25 12:45:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 12:45:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 12:45:22] Further information can be found at the LHC@home message board.
[2025-05-25 12:45:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 12:45:22] Checking for apptainer binary...
[2025-05-25 12:45:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 12:45:22] Running /usr/bin/apptainer --version
[2025-05-25 12:45:22] apptainer version 1.4.1-1.el9
[2025-05-25 12:45:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 12:45:22] c7-3-34.aglt2.org
[2025-05-25 12:45:22] apptainer works
[2025-05-25 12:45:22] Set ATHENA_PROC_NUMBER=8
[2025-05-25 12:45:22] Set ATHENA_CORE_NUMBER=8
[2025-05-25 12:45:22] Starting ATLAS job with PandaID=6665723604
[2025-05-25 12:45:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 15:34:44]  *** The last 200 lines of the pilot log: ***
[2025-05-25 15:34:44] 2025-05-25 19:34:20,574 | WARNING  | process 3608092 can no longer be monitored (due to stat problems) - aborting
[2025-05-25 15:34:44] 2025-05-25 19:34:20,574 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6665723604/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 15:34:44] 2025-05-25 19:34:21,057 | INFO     | number of running child processes to parent process 3608092: 1
[2025-05-25 15:34:44] 2025-05-25 19:34:21,057 | INFO     | maximum number of monitored processes: 6
[2025-05-25 15:34:44] 2025-05-25 19:34:23,562 | INFO     | monitor loop #627: job 0:6665723604 is in state 'finished'
[2025-05-25 15:34:44] 2025-05-25 19:34:23,563 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 15:34:44] 2025-05-25 19:34:24,155 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 15:34:44] 2025-05-25 19:34:24,159 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6665723604/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 15:34:44] 2025-05-25 19:34:24,160 | INFO     | extracted standard info from prmon json
[2025-05-25 15:34:44] 2025-05-25 19:34:24,160 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 15:34:44] 2025-05-25 19:34:24,160 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 15:34:44] 2025-05-25 19:34:24,160 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 15:34:44] 2025-05-25 19:34:24,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 15:34:44] 2025-05-25 19:34:24,162 | INFO     | fitting pss+swap vs Time
[2025-05-25 15:34:44] 2025-05-25 19:34:24,163 | INFO     | sum of square deviations: 1392881930.0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,172 | INFO     | sum of deviations: 14729979391.999998
[2025-05-25 15:34:44] 2025-05-25 19:34:24,173 | INFO     | mean x: 1748196638.0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,173 | INFO     | mean y: 2082616.587878788
[2025-05-25 15:34:44] 2025-05-25 19:34:24,173 | INFO     | -- intersect: -18485414346.56368
[2025-05-25 15:34:44] 2025-05-25 19:34:24,173 | INFO     | intersect: -18485414346.56368
[2025-05-25 15:34:44] 2025-05-25 19:34:24,173 | INFO     | chi2: 3.3576400194307894
[2025-05-25 15:34:44] 2025-05-25 19:34:24,173 | INFO     | sum of square deviations: 1270051720.0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,174 | INFO     | sum of deviations: 23276816332.999996
[2025-05-25 15:34:44] 2025-05-25 19:34:24,174 | INFO     | mean x: 1748196485.5
[2025-05-25 15:34:44] 2025-05-25 19:34:24,174 | INFO     | mean y: 2092928.7875
[2025-05-25 15:34:44] 2025-05-25 19:34:24,174 | INFO     | -- intersect: -32037900298.401386
[2025-05-25 15:34:44] 2025-05-25 19:34:24,174 | INFO     | intersect: -32037900298.401386
[2025-05-25 15:34:44] 2025-05-25 19:34:24,174 | INFO     | chi2: 2.613106240461347
[2025-05-25 15:34:44] 2025-05-25 19:34:24,174 | INFO     | current chi2=2.613106240461347 (change=22.17431811215012 %)
[2025-05-25 15:34:44] 2025-05-25 19:34:24,174 | INFO     | right removable region: 159
[2025-05-25 15:34:44] 2025-05-25 19:34:24,174 | INFO     | sum of square deviations: 1270051720.0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,175 | INFO     | sum of deviations: -18155532327.5
[2025-05-25 15:34:44] 2025-05-25 19:34:24,175 | INFO     | mean x: 1748196790.5
[2025-05-25 15:34:44] 2025-05-25 19:34:24,175 | INFO     | mean y: 2123192.66875
[2025-05-25 15:34:44] 2025-05-25 19:34:24,175 | INFO     | -- intersect: 24992793135.428635
[2025-05-25 15:34:44] 2025-05-25 19:34:24,175 | INFO     | intersect: 24992793135.428635
[2025-05-25 15:34:44] 2025-05-25 19:34:24,180 | INFO     | chi2: 0.963570199850797
[2025-05-25 15:34:44] 2025-05-25 19:34:24,180 | INFO     | current chi2=0.963570199850797 (change=71.30215882957732 %)
[2025-05-25 15:34:44] 2025-05-25 19:34:24,180 | INFO     | sum of square deviations: 1154663510.0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,181 | INFO     | sum of deviations: -19511988199.0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,181 | INFO     | mean x: 1748196943.0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,181 | INFO     | mean y: 2124886.419354839
[2025-05-25 15:34:44] 2025-05-25 19:34:24,181 | INFO     | -- intersect: 29543889933.921265
[2025-05-25 15:34:44] 2025-05-25 19:34:24,181 | INFO     | intersect: 29543889933.921265
[2025-05-25 15:34:44] 2025-05-25 19:34:24,181 | INFO     | chi2: 0.916555256286691
[2025-05-25 15:34:44] 2025-05-25 19:34:24,181 | INFO     | current chi2=0.916555256286691 (change=4.879244249291431 %)
[2025-05-25 15:34:44] 2025-05-25 19:34:24,181 | INFO     | left removable region: 20
[2025-05-25 15:34:44] 2025-05-25 19:34:24,182 | INFO     | sum of square deviations: 832722590.0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,182 | INFO     | sum of deviations: -4522761735.000002
[2025-05-25 15:34:44] 2025-05-25 19:34:24,182 | INFO     | mean x: 1748197065.0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,182 | INFO     | mean y: 2127750.834532374
[2025-05-25 15:34:44] 2025-05-25 19:34:24,182 | INFO     | -- intersect: 9497101089.820461
[2025-05-25 15:34:44] 2025-05-25 19:34:24,182 | INFO     | intersect: 9497101089.820461
[2025-05-25 15:34:44] 2025-05-25 19:34:24,183 | INFO     | chi2: 0.09759052356620312
[2025-05-25 15:34:44] 2025-05-25 19:34:24,183 | INFO     | -- intersect: 9497101089.820461
[2025-05-25 15:34:44] 2025-05-25 19:34:24,183 | INFO     | current memory leak: -5.43 B/s (using 139 data points, chi2=0.10)
[2025-05-25 15:34:44] 2025-05-25 19:34:24,183 | INFO     | ..............................
[2025-05-25 15:34:44] 2025-05-25 19:34:24,183 | INFO     | . Timing measurements:
[2025-05-25 15:34:44] 2025-05-25 19:34:24,183 | INFO     | . get job = 0 s
[2025-05-25 15:34:44] 2025-05-25 19:34:24,183 | INFO     | . initial setup = 4 s
[2025-05-25 15:34:44] 2025-05-25 19:34:24,183 | INFO     | . payload setup = 26 s
[2025-05-25 15:34:44] 2025-05-25 19:34:24,183 | INFO     | . stage-in = 0 s
[2025-05-25 15:34:44] 2025-05-25 19:34:24,184 | INFO     | . payload execution = 10032 s
[2025-05-25 15:34:44] 2025-05-25 19:34:24,184 | INFO     | . stage-out = 0 s
[2025-05-25 15:34:44] 2025-05-25 19:34:24,184 | INFO     | . log creation = 0 s
[2025-05-25 15:34:44] 2025-05-25 19:34:24,184 | INFO     | ..............................
[2025-05-25 15:34:44] 2025-05-25 19:34:24,291 | INFO     | 
[2025-05-25 15:34:44] 2025-05-25 19:34:24,291 | INFO     | job summary report
[2025-05-25 15:34:44] 2025-05-25 19:34:24,291 | INFO     | --------------------------------------------------
[2025-05-25 15:34:44] 2025-05-25 19:34:24,291 | INFO     | PanDA job id: 6665723604
[2025-05-25 15:34:44] 2025-05-25 19:34:24,291 | INFO     | task id: 44871837
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | errors: (none)
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | pilot state: finished 
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | transexitcode: 0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | exeerrorcode: 0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | exeerrordiag: 
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | exitcode: 0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | exitmsg: OK
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | cpuconsumptiontime: 39559 s
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | nevents: 400
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | neventsw: 0
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | pid: 3608092
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | pgrp: 3608092
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | corecount: 8
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | event service: False
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | sizes: {0: 2393512, 1: 2393767, 12: 2393767, 18: 2394001, 23: 2394029, 10062: 2422482, 10063: 2431423, 10065: 2431479, 10070: 2431649}
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | --------------------------------------------------
[2025-05-25 15:34:44] 2025-05-25 19:34:24,292 | INFO     | 
[2025-05-25 15:34:44] 2025-05-25 19:34:24,293 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,314 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 15:34:44] 2025-05-25 19:34:24,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 15:34:44] 2025-05-25 19:34:24,314 | INFO     | job 6665723604 has completed (purged errors)
[2025-05-25 15:34:44] 2025-05-25 19:34:24,314 | INFO     | overall cleanup function is called
[2025-05-25 15:34:44] 2025-05-25 19:34:25,321 | INFO     | --- collectZombieJob: --- 10, [3608092]
[2025-05-25 15:34:44] 2025-05-25 19:34:25,322 | INFO     | zombie collector waiting for pid 3608092
[2025-05-25 15:34:44] 2025-05-25 19:34:25,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 15:34:44] 2025-05-25 19:34:25,322 | INFO     | collected zombie processes
[2025-05-25 15:34:44] 2025-05-25 19:34:25,322 | INFO     | will attempt to kill all subprocesses of pid=3608092
[2025-05-25 15:34:44] 2025-05-25 19:34:25,690 | INFO     | 10112s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-25 15:34:44] 2025-05-25 19:34:25,747 | INFO     | process IDs to be killed: [3608092] (in reverse order)
[2025-05-25 15:34:44] 2025-05-25 19:34:25,922 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 15:34:44] 2025-05-25 19:34:25,922 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 15:34:44] 2025-05-25 19:34:25,943 | INFO     | did not find any defunct processes belonging to 3608092
[2025-05-25 15:34:44] 2025-05-25 19:34:25,964 | INFO     | did not find any defunct processes belonging to 3608092
[2025-05-25 15:34:44] 2025-05-25 19:34:25,964 | INFO     | ready for new job
[2025-05-25 15:34:44] 2025-05-25 19:34:25,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 15:34:44] 2025-05-25 19:34:25,966 | INFO     | **************************************
[2025-05-25 15:34:44] 2025-05-25 19:34:25,966 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 15:34:44] 2025-05-25 19:34:25,966 | INFO     | **************************************
[2025-05-25 15:34:44] 2025-05-25 19:34:25,966 | INFO     | 
[2025-05-25 15:34:44] 2025-05-25 19:34:25,983 | INFO     | architecture information:
[2025-05-25 15:34:44] 2025-05-25 19:34:25,983 | INFO     | executing command: cat /etc/os-release
[2025-05-25 15:34:44] 2025-05-25 19:34:26,020 | INFO     | cat /etc/os-release:
[2025-05-25 15:34:44] NAME="CentOS Linux"
[2025-05-25 15:34:44] VERSION="7 (Core)"
[2025-05-25 15:34:44] ID="centos"
[2025-05-25 15:34:44] ID_LIKE="rhel fedora"
[2025-05-25 15:34:44] VERSION_ID="7"
[2025-05-25 15:34:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 15:34:44] ANSI_COLOR="0;31"
[2025-05-25 15:34:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 15:34:44] HOME_URL="https://www.centos.org/"
[2025-05-25 15:34:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 15:34:44] 
[2025-05-25 15:34:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 15:34:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 15:34:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 15:34:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 15:34:44] 
[2025-05-25 15:34:44] 2025-05-25 19:34:26,020 | INFO     | **************************************
[2025-05-25 15:34:44] 2025-05-25 19:34:26,523 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-25 15:34:44] 2025-05-25 19:34:26,540 | INFO     | sufficient remaining disk space (73596403712 B)
[2025-05-25 15:34:44] 2025-05-25 19:34:26,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 15:34:44] 2025-05-25 19:34:26,540 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 15:34:44] 2025-05-25 19:34:26,540 | INFO     | update_server=False
[2025-05-25 15:34:44] 2025-05-25 19:34:26,540 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 15:34:44] 2025-05-25 19:34:26,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 15:34:44] 2025-05-25 19:34:26,625 | INFO     | all data control threads have been joined
[2025-05-25 15:34:44] 2025-05-25 19:34:26,634 | INFO     | all payload control threads have been joined
[2025-05-25 15:34:44] 2025-05-25 19:34:26,704 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 15:34:44] 2025-05-25 19:34:26,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 15:34:44] 2025-05-25 19:34:26,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 15:34:44] 2025-05-25 19:34:26,974 | INFO     | all job control threads have been joined
[2025-05-25 15:34:44] 2025-05-25 19:34:27,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 15:34:44] 2025-05-25 19:34:27,073 | INFO     | aborting loop
[2025-05-25 15:34:44] 2025-05-25 19:34:27,545 | INFO     | [job] retrieve thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:27,548 | INFO     | [payload] failed_post thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:27,632 | INFO     | [data] control thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:27,640 | INFO     | [payload] control thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:27,906 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:27,980 | INFO     | [job] control thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:28,085 | INFO     | [job] job monitor thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:28,103 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:28,546 | INFO     | [data] copytool_out thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:28,583 | INFO     | [job] validate thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:28,688 | INFO     | [payload] validate_post thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:28,714 | INFO     | [data] copytool_in thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:28,764 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:29,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 15:34:44] 2025-05-25 19:34:29,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 15:34:44] 2025-05-25 19:34:30,309 | INFO     | [job] queue monitor thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:33,298 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:36,744 | INFO     | job.realtimelogging is not enabled
[2025-05-25 15:34:44] 2025-05-25 19:34:37,749 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 15:34:44] 2025-05-25 19:34:39,149 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139881735227200)>', '<ExcThread(monitor, started 139881095354112)>']
[2025-05-25 15:34:44] 2025-05-25 19:34:39,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 15:34:44] 2025-05-25 19:34:39,803 | INFO     | [monitor] control thread has ended
[2025-05-25 15:34:44] 2025-05-25 19:34:44,175 | INFO     | all workflow threads have been joined
[2025-05-25 15:34:44] 2025-05-25 19:34:44,176 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 15:34:44] 2025-05-25 19:34:44,176 | INFO     | traces error code: 0
[2025-05-25 15:34:44] 2025-05-25 19:34:44,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 15:34:44] 2025-05-25 19:34:44,300 [wrapper] ==== pilot stdout END ====
[2025-05-25 15:34:44] 2025-05-25 19:34:44,303 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 15:34:44] 2025-05-25 19:34:44,304 [wrapper] pilotpid: 3590928
[2025-05-25 15:34:44] 2025-05-25 19:34:44,306 [wrapper] Pilot exit status: 0
[2025-05-25 15:34:44] 2025-05-25 19:34:44,318 [wrapper] pandaids: 6665723604
[2025-05-25 15:34:44] 2025-05-25 19:34:44,431 [wrapper] cleanup supervisor_pilot 1515634 3590929
[2025-05-25 15:34:44] 2025-05-25 19:34:44,434 [wrapper] Test setup, not cleaning
[2025-05-25 15:34:44] 2025-05-25 19:34:44,436 [wrapper] apfmon messages muted
[2025-05-25 15:34:44] 2025-05-25 19:34:44,438 [wrapper] ==== wrapper stdout END ====
[2025-05-25 15:34:44] 2025-05-25 19:34:44,440 [wrapper] ==== wrapper stderr END ====
[2025-05-25 15:34:44]  *** Error codes and diagnostics ***
[2025-05-25 15:34:44]     "exeErrorCode": 0,
[2025-05-25 15:34:44]     "exeErrorDiag": "",
[2025-05-25 15:34:44]     "pilotErrorCode": 0,
[2025-05-25 15:34:44]     "pilotErrorDiag": "",
[2025-05-25 15:34:44]  *** Listing of results directory ***
[2025-05-25 15:34:44] total 422160
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas    495897 May 25 05:58 pilot3.tar.gz
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas      5111 May 25 06:10 queuedata.json
[2025-05-25 15:34:44] -rwx------. 1 boincer umatlas     37140 May 25 06:11 runpilot2-wrapper.sh
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas       100 May 25 12:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 15:34:44] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 12:45 run_atlas
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas       105 May 25 12:45 job.xml
[2025-05-25 15:34:44] -rw-r--r--. 2 boincer umatlas 221876411 May 25 12:45 EVNT.44871834._001305.pool.root.1
[2025-05-25 15:34:44] drwxrwx--x. 2 boincer umatlas      4096 May 25 12:45 shared
[2025-05-25 15:34:44] -rw-r--r--. 2 boincer umatlas    508873 May 25 12:45 input.tar.gz
[2025-05-25 15:34:44] -rw-r--r--. 2 boincer umatlas     15093 May 25 12:45 start_atlas.sh
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas         0 May 25 12:45 boinc_lockfile
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas      2558 May 25 12:45 pandaJob.out
[2025-05-25 15:34:44] -rw-------. 1 boincer umatlas    990811 May 25 12:45 agis_schedconf.cvmfs.json
[2025-05-25 15:34:44] -rw-------. 1 boincer umatlas   1596740 May 25 12:45 agis_ddmendpoints.agis.ALL.json
[2025-05-25 15:34:44] drwx------. 4 boincer umatlas      4096 May 25 12:45 pilot3
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas      6932 May 25 15:27 init_data.xml
[2025-05-25 15:34:44] -rw-------. 1 boincer umatlas 204202938 May 25 15:33 HITS.44871837._032721.pool.root.1
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas       531 May 25 15:33 boinc_task_state.xml
[2025-05-25 15:34:44] -rw-------. 1 boincer umatlas        95 May 25 15:33 pilot_heartbeat.json
[2025-05-25 15:34:44] -rw-------. 1 boincer umatlas      1036 May 25 15:34 memory_monitor_summary.json
[2025-05-25 15:34:44] -rw-------. 1 boincer umatlas    341269 May 25 15:34 log.44871837._032721.job.log.tgz.1
[2025-05-25 15:34:44] -rw-------. 1 boincer umatlas      7691 May 25 15:34 heartbeat.json
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas        27 May 25 15:34 wrapper_checkpoint.txt
[2025-05-25 15:34:44] -rw-------. 1 boincer umatlas      4425 May 25 15:34 pilotlog.txt
[2025-05-25 15:34:44] -rw-------. 1 boincer umatlas    844628 May 25 15:34 log.44871837._032721.job.log.1
[2025-05-25 15:34:44] -rw-------. 1 boincer umatlas       357 May 25 15:34 output.list
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas       620 May 25 15:34 runtime_log
[2025-05-25 15:34:44] -rw-------. 1 boincer umatlas   1208320 May 25 15:34 result.tar.gz
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas      8192 May 25 15:34 boinc_mmap_file
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas      8655 May 25 15:34 runtime_log.err
[2025-05-25 15:34:44] -rw-------. 1 boincer umatlas       654 May 25 15:34 4e4LDmzUNd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFKOKDmKwXC9n.diag
[2025-05-25 15:34:44] -rw-r--r--. 1 boincer umatlas     21086 May 25 15:34 stderr.txt
[2025-05-25 15:34:45] HITS file was successfully produced:
[2025-05-25 15:34:45] -rw-------. 1 boincer umatlas 204202938 May 25 15:33 shared/HITS.pool.root.1
[2025-05-25 15:34:45]  *** Contents of shared directory: ***
[2025-05-25 15:34:45] total 417804
[2025-05-25 15:34:45] -rw-r--r--. 2 boincer umatlas 221876411 May 25 12:45 ATLAS.root_0
[2025-05-25 15:34:45] -rw-r--r--. 2 boincer umatlas    508873 May 25 12:45 input.tar.gz
[2025-05-25 15:34:45] -rw-r--r--. 2 boincer umatlas     15093 May 25 12:45 start_atlas.sh
[2025-05-25 15:34:45] -rw-------. 1 boincer umatlas 204202938 May 25 15:33 HITS.pool.root.1
[2025-05-25 15:34:45] -rw-------. 1 boincer umatlas   1208320 May 25 15:34 result.tar.gz
15:34:46 (3582677): run_atlas exited; CPU time 39931.712561
15:34:46 (3582677): called boinc_finish(0)

</stderr_txt>
]]>

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