Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:47:57 (84925): wrapper (7.7.26015): starting
12:47:57 (84925): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 12:47:57] Arguments: --nthreads 8
[2025-05-25 12:47:57] Threads: 8
[2025-05-25 12:47:57] Checking for CVMFS
[2025-05-25 12:47:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 12:47:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 12:47:59] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 12:48:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 12:48:00] 2.11.2.0 7109 14642 179772 146408 1 603 17110826 18432001 24695 130560 0 51937518 99.223 76810517 33606 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 12:48:00] CVMFS is ok
[2025-05-25 12:48:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 12:48:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 12:48:00] Further information can be found at the LHC@home message board.
[2025-05-25 12:48:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 12:48:00] Checking for apptainer binary...
[2025-05-25 12:48:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 12:48:00] Running /usr/bin/apptainer --version
[2025-05-25 12:48:00] apptainer version 1.3.2-1.el7
[2025-05-25 12:48:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 12:48:30] c-211-35-2.aglt2.org
[2025-05-25 12:48:30] apptainer works
[2025-05-25 12:48:30] Set ATHENA_PROC_NUMBER=8
[2025-05-25 12:48:30] Set ATHENA_CORE_NUMBER=8
[2025-05-25 12:48:30] Starting ATLAS job with PandaID=6665725179
[2025-05-25 12:48:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 19:55:13]  *** The last 200 lines of the pilot log: ***
[2025-05-25 19:55:13] 2025-05-25 23:54:57,825 | INFO     | chi2: 14.585834159518514
[2025-05-25 19:55:13] 2025-05-25 23:54:57,825 | INFO     | current chi2=14.585834159518514 (change=9.483699621754655 %)
[2025-05-25 19:55:13] 2025-05-25 23:54:57,826 | INFO     | right removable region: 405
[2025-05-25 19:55:13] 2025-05-25 23:54:57,826 | INFO     | sum of square deviations: 20751879147.27097
[2025-05-25 19:55:13] 2025-05-25 23:54:57,835 | INFO     | sum of deviations: 353195151063.5318
[2025-05-25 19:55:13] 2025-05-25 23:54:57,835 | INFO     | mean x: 1748204866.7339902
[2025-05-25 19:55:13] 2025-05-25 23:54:57,839 | INFO     | mean y: 2393343.5049261083
[2025-05-25 19:55:13] 2025-05-25 23:54:57,839 | INFO     | -- intersect: -29751899152.81166
[2025-05-25 19:55:13] 2025-05-25 23:54:57,839 | INFO     | intersect: -29751899152.81166
[2025-05-25 19:55:13] 2025-05-25 23:54:57,840 | INFO     | chi2: 10.42743666617542
[2025-05-25 19:55:13] 2025-05-25 23:54:57,840 | INFO     | current chi2=10.42743666617542 (change=35.28974900384986 %)
[2025-05-25 19:55:13] 2025-05-25 23:54:57,841 | INFO     | sum of square deviations: 19994561554.493813
[2025-05-25 19:55:13] 2025-05-25 23:54:57,849 | INFO     | sum of deviations: 220350241141.3116
[2025-05-25 19:55:13] 2025-05-25 23:54:57,849 | INFO     | mean x: 1748205019.2369077
[2025-05-25 19:55:13] 2025-05-25 23:54:57,849 | INFO     | mean y: 2420089.1546134665
[2025-05-25 19:55:13] 2025-05-25 23:54:57,849 | INFO     | -- intersect: -19263688672.64145
[2025-05-25 19:55:13] 2025-05-25 23:54:57,849 | INFO     | intersect: -19263688672.64145
[2025-05-25 19:55:13] 2025-05-25 23:54:57,850 | INFO     | chi2: 6.072751249009969
[2025-05-25 19:55:13] 2025-05-25 23:54:57,850 | INFO     | current chi2=6.072751249009969 (change=41.76180164480121 %)
[2025-05-25 19:55:13] 2025-05-25 23:54:57,850 | INFO     | sum of square deviations: 19255895474.20955
[2025-05-25 19:55:13] 2025-05-25 23:54:57,859 | INFO     | sum of deviations: 109234903036.68448
[2025-05-25 19:55:13] 2025-05-25 23:54:57,863 | INFO     | mean x: 1748205171.739899
[2025-05-25 19:55:13] 2025-05-25 23:54:57,864 | INFO     | mean y: 2443017.6085858587
[2025-05-25 19:55:13] 2025-05-25 23:54:57,864 | INFO     | -- intersect: -9914780654.435535
[2025-05-25 19:55:13] 2025-05-25 23:54:57,864 | INFO     | intersect: -9914780654.435535
[2025-05-25 19:55:13] 2025-05-25 23:54:57,864 | INFO     | chi2: 3.1834304833903206
[2025-05-25 19:55:13] 2025-05-25 23:54:57,864 | INFO     | current chi2=3.1834304833903206 (change=47.57844751323694 %)
[2025-05-25 19:55:13] 2025-05-25 23:54:57,865 | INFO     | sum of square deviations: 18535672621.401592
[2025-05-25 19:55:13] 2025-05-25 23:54:57,873 | INFO     | sum of deviations: 43483714963.60102
[2025-05-25 19:55:13] 2025-05-25 23:54:57,873 | INFO     | mean x: 1748205324.2404091
[2025-05-25 19:55:13] 2025-05-25 23:54:57,873 | INFO     | mean y: 2456911.493606138
[2025-05-25 19:55:13] 2025-05-25 23:54:57,873 | INFO     | -- intersect: -4098741009.3926034
[2025-05-25 19:55:13] 2025-05-25 23:54:57,873 | INFO     | intersect: -4098741009.3926034
[2025-05-25 19:55:13] 2025-05-25 23:54:57,874 | INFO     | chi2: 2.1413968933499774
[2025-05-25 19:55:13] 2025-05-25 23:54:57,874 | INFO     | current chi2=2.1413968933499774 (change=32.73304051956518 %)
[2025-05-25 19:55:13] 2025-05-25 23:54:57,875 | INFO     | sum of square deviations: 17833636278.093307
[2025-05-25 19:55:13] 2025-05-25 23:54:57,882 | INFO     | sum of deviations: 8563321356.44561
[2025-05-25 19:55:13] 2025-05-25 23:54:57,883 | INFO     | mean x: 1748205476.7409327
[2025-05-25 19:55:13] 2025-05-25 23:54:57,883 | INFO     | mean y: 2464491.9844559585
[2025-05-25 19:55:13] 2025-05-25 23:54:57,883 | INFO     | -- intersect: -836985469.92939
[2025-05-25 19:55:13] 2025-05-25 23:54:57,887 | INFO     | intersect: -836985469.92939
[2025-05-25 19:55:13] 2025-05-25 23:54:57,888 | INFO     | chi2: 1.8769909882528455
[2025-05-25 19:55:13] 2025-05-25 23:54:57,888 | INFO     | current chi2=1.8769909882528455 (change=12.347356341004973 %)
[2025-05-25 19:55:13] 2025-05-25 23:54:57,888 | INFO     | left removable region: 50
[2025-05-25 19:55:13] 2025-05-25 23:54:57,889 | INFO     | sum of square deviations: 13872733064.185966
[2025-05-25 19:55:13] 2025-05-25 23:54:57,897 | INFO     | monitor loop #1578: job 0:6665725179 is in state 'finished'
[2025-05-25 19:55:13] 2025-05-25 23:54:57,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 19:55:13] 2025-05-25 23:54:57,898 | INFO     | sum of deviations: 13648901102.419718
[2025-05-25 19:55:13] 2025-05-25 23:54:57,898 | INFO     | mean x: 1748206056.2478874
[2025-05-25 19:55:13] 2025-05-25 23:54:57,898 | INFO     | mean y: 2486986.8929577465
[2025-05-25 19:55:13] 2025-05-25 23:54:57,899 | INFO     | -- intersect: -1717512342.5815444
[2025-05-25 19:55:13] 2025-05-25 23:54:57,899 | INFO     | intersect: -1717512342.5815444
[2025-05-25 19:55:13] 2025-05-25 23:54:57,899 | INFO     | chi2: 0.0076034279670212845
[2025-05-25 19:55:13] 2025-05-25 23:54:57,899 | INFO     | -- intersect: -1717512342.5815444
[2025-05-25 19:55:13] 2025-05-25 23:54:57,899 | INFO     | current memory leak: 0.98 B/s (using 355 data points, chi2=0.01)
[2025-05-25 19:55:13] 2025-05-25 23:54:57,900 | INFO     | ..............................
[2025-05-25 19:55:13] 2025-05-25 23:54:57,900 | INFO     | . Timing measurements:
[2025-05-25 19:55:13] 2025-05-25 23:54:57,900 | INFO     | . get job = 1 s
[2025-05-25 19:55:13] 2025-05-25 23:54:57,901 | INFO     | . initial setup = 9 s
[2025-05-25 19:55:13] 2025-05-25 23:54:57,901 | INFO     | . payload setup = 156 s
[2025-05-25 19:55:13] 2025-05-25 23:54:57,901 | INFO     | . stage-in = 0 s
[2025-05-25 19:55:13] 2025-05-25 23:54:57,901 | INFO     | . payload execution = 25111 s
[2025-05-25 19:55:13] 2025-05-25 23:54:57,901 | INFO     | . stage-out = 5 s
[2025-05-25 19:55:13] 2025-05-25 23:54:57,901 | INFO     | . log creation = 0 s
[2025-05-25 19:55:13] 2025-05-25 23:54:57,906 | INFO     | ..............................
[2025-05-25 19:55:13] 2025-05-25 23:54:58,180 | INFO     | 
[2025-05-25 19:55:13] 2025-05-25 23:54:58,180 | INFO     | job summary report
[2025-05-25 19:55:13] 2025-05-25 23:54:58,181 | INFO     | --------------------------------------------------
[2025-05-25 19:55:13] 2025-05-25 23:54:58,181 | INFO     | PanDA job id: 6665725179
[2025-05-25 19:55:13] 2025-05-25 23:54:58,181 | INFO     | task id: 44871837
[2025-05-25 19:55:13] 2025-05-25 23:54:58,181 | INFO     | errors: (none)
[2025-05-25 19:55:13] 2025-05-25 23:54:58,181 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 19:55:13] 2025-05-25 23:54:58,181 | INFO     | pilot state: finished 
[2025-05-25 19:55:13] 2025-05-25 23:54:58,181 | INFO     | transexitcode: 0
[2025-05-25 19:55:13] 2025-05-25 23:54:58,181 | INFO     | exeerrorcode: 0
[2025-05-25 19:55:13] 2025-05-25 23:54:58,181 | INFO     | exeerrordiag: 
[2025-05-25 19:55:13] 2025-05-25 23:54:58,181 | INFO     | exitcode: 0
[2025-05-25 19:55:13] 2025-05-25 23:54:58,181 | INFO     | exitmsg: OK
[2025-05-25 19:55:13] 2025-05-25 23:54:58,181 | INFO     | cpuconsumptiontime: 55108 s
[2025-05-25 19:55:13] 2025-05-25 23:54:58,182 | INFO     | nevents: 400
[2025-05-25 19:55:13] 2025-05-25 23:54:58,182 | INFO     | neventsw: 0
[2025-05-25 19:55:13] 2025-05-25 23:54:58,182 | INFO     | pid: 108200
[2025-05-25 19:55:13] 2025-05-25 23:54:58,182 | INFO     | pgrp: 108200
[2025-05-25 19:55:13] 2025-05-25 23:54:58,182 | INFO     | corecount: 8
[2025-05-25 19:55:13] 2025-05-25 23:54:58,182 | INFO     | event service: False
[2025-05-25 19:55:13] 2025-05-25 23:54:58,182 | INFO     | sizes: {0: 2393570, 1: 2393769, 2: 2393797, 13: 2393797, 24: 2393853, 34: 2393881, 45: 2394037, 54: 2394271, 56: 2394299, 25271: 2429147, 25278: 2438088, 25280: 24
[2025-05-25 19:55:13] 2025-05-25 23:54:58,182 | INFO     | --------------------------------------------------
[2025-05-25 19:55:13] 2025-05-25 23:54:58,182 | INFO     | 
[2025-05-25 19:55:13] 2025-05-25 23:54:58,182 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-25 19:55:13] 2025-05-25 23:54:58,239 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,239 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,241 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 19:55:13] 2025-05-25 23:54:58,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,241 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 19:55:13] 2025-05-25 23:54:58,241 | INFO     | job 6665725179 has completed (purged errors)
[2025-05-25 19:55:13] 2025-05-25 23:54:58,241 | INFO     | overall cleanup function is called
[2025-05-25 19:55:13] 2025-05-25 23:54:59,277 | INFO     | --- collectZombieJob: --- 10, [108200]
[2025-05-25 19:55:13] 2025-05-25 23:54:59,277 | INFO     | zombie collector waiting for pid 108200
[2025-05-25 19:55:13] 2025-05-25 23:54:59,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 19:55:13] 2025-05-25 23:54:59,278 | INFO     | collected zombie processes
[2025-05-25 19:55:13] 2025-05-25 23:54:59,278 | INFO     | will attempt to kill all subprocesses of pid=108200
[2025-05-25 19:55:13] 2025-05-25 23:54:59,860 | INFO     | process IDs to be killed: [108200] (in reverse order)
[2025-05-25 19:55:13] 2025-05-25 23:55:00,406 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 19:55:13] 2025-05-25 23:55:00,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 19:55:13] 2025-05-25 23:55:00,418 | INFO     | did not find any defunct processes belonging to 108200
[2025-05-25 19:55:13] 2025-05-25 23:55:00,431 | INFO     | did not find any defunct processes belonging to 108200
[2025-05-25 19:55:13] 2025-05-25 23:55:00,432 | INFO     | ready for new job
[2025-05-25 19:55:13] 2025-05-25 23:55:00,433 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 19:55:13] 2025-05-25 23:55:00,435 | INFO     | **************************************
[2025-05-25 19:55:13] 2025-05-25 23:55:00,435 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 19:55:13] 2025-05-25 23:55:00,435 | INFO     | **************************************
[2025-05-25 19:55:13] 2025-05-25 23:55:00,435 | INFO     | 
[2025-05-25 19:55:13] 2025-05-25 23:55:00,454 | INFO     | architecture information:
[2025-05-25 19:55:13] 2025-05-25 23:55:00,460 | INFO     | executing command: cat /etc/os-release
[2025-05-25 19:55:13] 2025-05-25 23:55:00,482 | INFO     | PID=94444 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-25 19:55:13] 2025-05-25 23:55:00,482 | INFO     | .. there are 24 such processes running
[2025-05-25 19:55:13] 2025-05-25 23:55:00,493 | INFO     | cat /etc/os-release:
[2025-05-25 19:55:13] NAME="CentOS Linux"
[2025-05-25 19:55:13] VERSION="7 (Core)"
[2025-05-25 19:55:13] ID="centos"
[2025-05-25 19:55:13] ID_LIKE="rhel fedora"
[2025-05-25 19:55:13] VERSION_ID="7"
[2025-05-25 19:55:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 19:55:13] ANSI_COLOR="0;31"
[2025-05-25 19:55:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 19:55:13] HOME_URL="https://www.centos.org/"
[2025-05-25 19:55:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 19:55:13] 
[2025-05-25 19:55:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 19:55:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 19:55:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 19:55:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 19:55:13] 
[2025-05-25 19:55:13] 2025-05-25 23:55:00,494 | INFO     | **************************************
[2025-05-25 19:55:13] 2025-05-25 23:55:00,997 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-25 19:55:13] 2025-05-25 23:55:01,132 | INFO     | sufficient remaining disk space (103598260224 B)
[2025-05-25 19:55:13] 2025-05-25 23:55:01,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 19:55:13] 2025-05-25 23:55:01,133 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 19:55:13] 2025-05-25 23:55:01,133 | INFO     | update_server=False
[2025-05-25 19:55:13] 2025-05-25 23:55:01,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 19:55:13] 2025-05-25 23:55:01,133 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 19:55:13] 2025-05-25 23:55:01,133 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 19:55:13] 2025-05-25 23:55:01,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 19:55:13] 2025-05-25 23:55:01,133 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 19:55:13] 2025-05-25 23:55:01,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 19:55:13] 2025-05-25 23:55:01,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 19:55:13] 2025-05-25 23:55:01,206 | INFO     | all data control threads have been joined
[2025-05-25 19:55:13] 2025-05-25 23:55:01,416 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 19:55:13] 2025-05-25 23:55:01,420 | INFO     | aborting loop
[2025-05-25 19:55:13] 2025-05-25 23:55:01,660 | INFO     | all job control threads have been joined
[2025-05-25 19:55:13] 2025-05-25 23:55:02,138 | INFO     | [job] retrieve thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:02,214 | INFO     | [data] control thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:02,339 | INFO     | all payload control threads have been joined
[2025-05-25 19:55:13] 2025-05-25 23:55:02,426 | INFO     | [job] job monitor thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:02,457 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:02,610 | INFO     | [payload] failed_post thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:02,667 | INFO     | [job] control thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:02,968 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:02,974 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:02,975 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:02,975 | INFO     | [data] copytool_in thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:02,986 | INFO     | [job] validate thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:03,140 | INFO     | [data] copytool_out thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:03,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 19:55:13] 2025-05-25 23:55:03,345 | INFO     | [payload] control thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:03,423 | INFO     | [payload] validate_post thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:04,174 | INFO     | [job] queue monitor thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:05,144 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 19:55:13] 2025-05-25 23:55:05,473 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139817099638592)>', '<ExcThread(monitor, started 139816637273856)>']
[2025-05-25 19:55:13] 2025-05-25 23:55:06,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 19:55:13] 2025-05-25 23:55:06,169 | INFO     | [monitor] control thread has ended
[2025-05-25 19:55:13] 2025-05-25 23:55:10,501 | INFO     | all workflow threads have been joined
[2025-05-25 19:55:13] 2025-05-25 23:55:10,501 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 19:55:13] 2025-05-25 23:55:10,502 | INFO     | traces error code: 0
[2025-05-25 19:55:13] 2025-05-25 23:55:10,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 19:55:13] 2025-05-25 23:55:11,073 [wrapper] ==== pilot stdout END ====
[2025-05-25 19:55:13] 2025-05-25 23:55:11,103 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 19:55:13] 2025-05-25 23:55:11,138 [wrapper] pilotpid: 94444
[2025-05-25 19:55:13] 2025-05-25 23:55:11,201 [wrapper] Pilot exit status: 0
[2025-05-25 19:55:13] 2025-05-25 23:55:11,403 [wrapper] pandaids: 6665725179
[2025-05-25 19:55:13] 2025-05-25 23:55:11,888 [wrapper] cleanup supervisor_pilot 261512 94445
[2025-05-25 19:55:13] 2025-05-25 23:55:11,924 [wrapper] Test setup, not cleaning
[2025-05-25 19:55:13] 2025-05-25 23:55:11,955 [wrapper] apfmon messages muted
[2025-05-25 19:55:13] 2025-05-25 23:55:11,995 [wrapper] ==== wrapper stdout END ====
[2025-05-25 19:55:13] 2025-05-25 23:55:12,043 [wrapper] ==== wrapper stderr END ====
[2025-05-25 19:55:13]  *** Error codes and diagnostics ***
[2025-05-25 19:55:13]     "exeErrorCode": 0,
[2025-05-25 19:55:13]     "exeErrorDiag": "",
[2025-05-25 19:55:13]     "pilotErrorCode": 0,
[2025-05-25 19:55:13]     "pilotErrorDiag": "",
[2025-05-25 19:55:13]  *** Listing of results directory ***
[2025-05-25 19:55:13] total 414444
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas    495897 May 25 06:45 pilot3.tar.gz
[2025-05-25 19:55:13] -rwx------ 1 boincer umatlas     37140 May 25 06:48 runpilot2-wrapper.sh
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas      5111 May 25 06:48 queuedata.json
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas       100 May 25 12:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 19:55:13] -rwxr-xr-x 1 boincer umatlas      7986 May 25 12:47 run_atlas
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas       105 May 25 12:47 job.xml
[2025-05-25 19:55:13] -rw-r--r-- 2 boincer umatlas 222133991 May 25 12:47 EVNT.44871834._001328.pool.root.1
[2025-05-25 19:55:13] -rw-r--r-- 2 boincer umatlas     15093 May 25 12:47 start_atlas.sh
[2025-05-25 19:55:13] drwxrwx--x 2 boincer umatlas      4096 May 25 12:47 shared
[2025-05-25 19:55:13] -rw-r--r-- 2 boincer umatlas    508874 May 25 12:47 input.tar.gz
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas         0 May 25 12:47 boinc_lockfile
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas      2559 May 25 12:48 pandaJob.out
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas    990811 May 25 12:50 agis_schedconf.cvmfs.json
[2025-05-25 19:55:13] drwx------ 4 boincer umatlas      4096 May 25 12:51 pilot3
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas      6385 May 25 19:47 init_data.xml
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas 193347487 May 25 19:52 HITS.44871837._033310.pool.root.1
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas       531 May 25 19:52 boinc_task_state.xml
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas      1061 May 25 19:54 memory_monitor_summary.json
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas   1596740 May 25 19:54 agis_ddmendpoints.agis.ALL.json
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas    497151 May 25 19:54 log.44871837._033310.job.log.tgz.1
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas        95 May 25 19:54 pilot_heartbeat.json
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas      7761 May 25 19:54 heartbeat.json
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas      4870 May 25 19:55 pilotlog.txt
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas      8192 May 25 19:55 boinc_mmap_file
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas        28 May 25 19:55 wrapper_checkpoint.txt
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas   2047386 May 25 19:55 log.44871837._033310.job.log.1
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas       357 May 25 19:55 output.list
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas       620 May 25 19:55 runtime_log
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas   2560000 May 25 19:55 result.tar.gz
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas      8670 May 25 19:55 runtime_log.err
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas       664 May 25 19:55 0PZMDm64Nd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiOOKDmryrlqn.diag
[2025-05-25 19:55:13] -rw-r--r-- 1 boincer umatlas     21127 May 25 19:55 stderr.txt
[2025-05-25 19:55:13] HITS file was successfully produced:
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas 193347487 May 25 19:52 shared/HITS.pool.root.1
[2025-05-25 19:55:13]  *** Contents of shared directory: ***
[2025-05-25 19:55:13] total 408764
[2025-05-25 19:55:13] -rw-r--r-- 2 boincer umatlas 222133991 May 25 12:47 ATLAS.root_0
[2025-05-25 19:55:13] -rw-r--r-- 2 boincer umatlas     15093 May 25 12:47 start_atlas.sh
[2025-05-25 19:55:13] -rw-r--r-- 2 boincer umatlas    508874 May 25 12:47 input.tar.gz
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas 193347487 May 25 19:52 HITS.pool.root.1
[2025-05-25 19:55:13] -rw------- 1 boincer umatlas   2560000 May 25 19:55 result.tar.gz
19:55:15 (84925): run_atlas exited; CPU time 56019.371970
19:55:15 (84925): called boinc_finish(0)

</stderr_txt>
]]>

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