Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:26:05 (263875): wrapper (7.7.26015): starting
12:26:05 (263875): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 12:26:05] Arguments: --nthreads 8
[2025-05-25 12:26:05] Threads: 8
[2025-05-25 12:26:05] Checking for CVMFS
[2025-05-25 12:26:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 12:26:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 12:26:06] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 12:26:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 12:26:07] 2.11.2.0 7109 14620 174264 146408 3 474 15872138 18432000 23953 130560 0 51657406 99.220 76758567 33677 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 12:26:07] CVMFS is ok
[2025-05-25 12:26:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 12:26:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 12:26:07] Further information can be found at the LHC@home message board.
[2025-05-25 12:26:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 12:26:07] Checking for apptainer binary...
[2025-05-25 12:26:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 12:26:07] Running /usr/bin/apptainer --version
[2025-05-25 12:26:07] apptainer version 1.3.2-1.el7
[2025-05-25 12:26:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 12:26:30] c-211-35-2.aglt2.org
[2025-05-25 12:26:30] apptainer works
[2025-05-25 12:26:30] Set ATHENA_PROC_NUMBER=8
[2025-05-25 12:26:30] Set ATHENA_CORE_NUMBER=8
[2025-05-25 12:26:30] Starting ATLAS job with PandaID=6665720128
[2025-05-25 12:26:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 19:48:04]  *** The last 200 lines of the pilot log: ***
[2025-05-25 19:48:04] 2025-05-25 23:47:44,154 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-25 19:48:04] 2025-05-25 23:47:44,155 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6665720128/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 19:48:04] 2025-05-25 23:47:44,161 | INFO     | extracted standard info from prmon json
[2025-05-25 19:48:04] 2025-05-25 23:47:44,161 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 19:48:04] 2025-05-25 23:47:44,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 19:48:04] 2025-05-25 23:47:44,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 19:48:04] 2025-05-25 23:47:44,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 19:48:04] 2025-05-25 23:47:44,197 | INFO     | fitting pss+swap vs Time
[2025-05-25 19:48:04] 2025-05-25 23:47:44,199 | INFO     | sum of square deviations: 24141154265.27396
[2025-05-25 19:48:04] 2025-05-25 23:47:44,210 | INFO     | sum of deviations: 264272777551.5056
[2025-05-25 19:48:04] 2025-05-25 23:47:44,211 | INFO     | mean x: 1748203753.203747
[2025-05-25 19:48:04] 2025-05-25 23:47:44,211 | INFO     | mean y: 2422683.6838407493
[2025-05-25 19:48:04] 2025-05-25 23:47:44,211 | INFO     | -- intersect: -19135132070.67571
[2025-05-25 19:48:04] 2025-05-25 23:47:44,211 | INFO     | intersect: -19135132070.67571
[2025-05-25 19:48:04] 2025-05-25 23:47:44,212 | INFO     | chi2: 8.284678571973693
[2025-05-25 19:48:04] 2025-05-25 23:47:44,212 | INFO     | sum of square deviations: 23302990443.973984
[2025-05-25 19:48:04] 2025-05-25 23:47:44,225 | INFO     | sum of deviations: 319283232403.99066
[2025-05-25 19:48:04] 2025-05-25 23:47:44,225 | INFO     | mean x: 1748203600.7037914
[2025-05-25 19:48:04] 2025-05-25 23:47:44,226 | INFO     | mean y: 2432617.255924171
[2025-05-25 19:48:04] 2025-05-25 23:47:44,226 | INFO     | -- intersect: -23950377125.12381
[2025-05-25 19:48:04] 2025-05-25 23:47:44,226 | INFO     | intersect: -23950377125.12381
[2025-05-25 19:48:04] 2025-05-25 23:47:44,226 | INFO     | chi2: 6.668816444292825
[2025-05-25 19:48:04] 2025-05-25 23:47:44,226 | INFO     | current chi2=6.668816444292825 (change=19.504222326104248 %)
[2025-05-25 19:48:04] 2025-05-25 23:47:44,227 | INFO     | right removable region: 421
[2025-05-25 19:48:04] 2025-05-25 23:47:44,227 | INFO     | sum of square deviations: 23302963177.563965
[2025-05-25 19:48:04] 2025-05-25 23:47:44,237 | INFO     | sum of deviations: 116507977479.71078
[2025-05-25 19:48:04] 2025-05-25 23:47:44,238 | INFO     | mean x: 1748203905.706161
[2025-05-25 19:48:04] 2025-05-25 23:47:44,238 | INFO     | mean y: 2449557.4573459714
[2025-05-25 19:48:04] 2025-05-25 23:47:44,238 | INFO     | -- intersect: -8738056949.116812
[2025-05-25 19:48:04] 2025-05-25 23:47:44,238 | INFO     | intersect: -8738056949.116812
[2025-05-25 19:48:04] 2025-05-25 23:47:44,239 | INFO     | chi2: 3.6431749186890108
[2025-05-25 19:48:04] 2025-05-25 23:47:44,239 | INFO     | current chi2=3.6431749186890108 (change=56.02515067979176 %)
[2025-05-25 19:48:04] 2025-05-25 23:47:44,239 | INFO     | sum of square deviations: 22484400364.84892
[2025-05-25 19:48:04] 2025-05-25 23:47:44,247 | INFO     | sum of deviations: 29236323987.16538
[2025-05-25 19:48:04] 2025-05-25 23:47:44,247 | INFO     | mean x: 1748204058.2086332
[2025-05-25 19:48:04] 2025-05-25 23:47:44,251 | INFO     | mean y: 2465786.0095923264
[2025-05-25 19:48:04] 2025-05-25 23:47:44,252 | INFO     | -- intersect: -2270712925.101139
[2025-05-25 19:48:04] 2025-05-25 23:47:44,252 | INFO     | intersect: -2270712925.101139
[2025-05-25 19:48:04] 2025-05-25 23:47:44,252 | INFO     | chi2: 1.9985298040768495
[2025-05-25 19:48:04] 2025-05-25 23:47:44,253 | INFO     | current chi2=1.9985298040768495 (change=45.14318283690819 %)
[2025-05-25 19:48:04] 2025-05-25 23:47:44,253 | INFO     | sum of square deviations: 21685258823.048557
[2025-05-25 19:48:04] 2025-05-25 23:47:44,264 | INFO     | sum of deviations: -2297250633.0291176
[2025-05-25 19:48:04] 2025-05-25 23:47:44,264 | INFO     | mean x: 1748204210.7087379
[2025-05-25 19:48:04] 2025-05-25 23:47:44,266 | INFO     | mean y: 2471794.424757282
[2025-05-25 19:48:04] 2025-05-25 23:47:44,266 | INFO     | -- intersect: 187669640.689164
[2025-05-25 19:48:04] 2025-05-25 23:47:44,267 | INFO     | intersect: 187669640.689164
[2025-05-25 19:48:04] 2025-05-25 23:47:44,267 | INFO     | chi2: 1.8009979800272078
[2025-05-25 19:48:04] 2025-05-25 23:47:44,267 | INFO     | current chi2=1.8009979800272078 (change=9.883856805472293 %)
[2025-05-25 19:48:04] 2025-05-25 23:47:44,267 | INFO     | left removable region: 30
[2025-05-25 19:48:04] 2025-05-25 23:47:44,270 | INFO     | sum of square deviations: 18535399441.38113
[2025-05-25 19:48:04] 2025-05-25 23:47:44,278 | INFO     | sum of deviations: 21114824674.75447
[2025-05-25 19:48:04] 2025-05-25 23:47:44,279 | INFO     | mean x: 1748204485.2122762
[2025-05-25 19:48:04] 2025-05-25 23:47:44,279 | INFO     | mean y: 2489302.051150895
[2025-05-25 19:48:04] 2025-05-25 23:47:44,279 | INFO     | -- intersect: -1988999002.1321714
[2025-05-25 19:48:04] 2025-05-25 23:47:44,279 | INFO     | intersect: -1988999002.1321714
[2025-05-25 19:48:04] 2025-05-25 23:47:44,279 | INFO     | chi2: 0.004419008874061583
[2025-05-25 19:48:04] 2025-05-25 23:47:44,280 | INFO     | -- intersect: -1988999002.1321714
[2025-05-25 19:48:04] 2025-05-25 23:47:44,280 | INFO     | current memory leak: 1.14 B/s (using 391 data points, chi2=0.00)
[2025-05-25 19:48:04] 2025-05-25 23:47:44,283 | INFO     | ..............................
[2025-05-25 19:48:04] 2025-05-25 23:47:44,283 | INFO     | . Timing measurements:
[2025-05-25 19:48:04] 2025-05-25 23:47:44,283 | INFO     | . get job = 0 s
[2025-05-25 19:48:04] 2025-05-25 23:47:44,283 | INFO     | . initial setup = 6 s
[2025-05-25 19:48:04] 2025-05-25 23:47:44,283 | INFO     | . payload setup = 67 s
[2025-05-25 19:48:04] 2025-05-25 23:47:44,283 | INFO     | . stage-in = 0 s
[2025-05-25 19:48:04] 2025-05-25 23:47:44,283 | INFO     | . payload execution = 26102 s
[2025-05-25 19:48:04] 2025-05-25 23:47:44,284 | INFO     | . stage-out = 6 s
[2025-05-25 19:48:04] 2025-05-25 23:47:44,284 | INFO     | . log creation = 1 s
[2025-05-25 19:48:04] 2025-05-25 23:47:44,284 | INFO     | ..............................
[2025-05-25 19:48:04] 2025-05-25 23:47:44,764 | INFO     | 
[2025-05-25 19:48:04] 2025-05-25 23:47:44,764 | INFO     | job summary report
[2025-05-25 19:48:04] 2025-05-25 23:47:44,764 | INFO     | --------------------------------------------------
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | PanDA job id: 6665720128
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | task id: 44871837
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | errors: (none)
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | pilot state: finished 
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | transexitcode: 0
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | exeerrorcode: 0
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | exeerrordiag: 
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | exitcode: 0
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | exitmsg: OK
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | cpuconsumptiontime: 58548 s
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | nevents: 400
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | neventsw: 0
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | pid: 16800
[2025-05-25 19:48:04] 2025-05-25 23:47:44,765 | INFO     | pgrp: 16800
[2025-05-25 19:48:04] 2025-05-25 23:47:44,766 | INFO     | corecount: 8
[2025-05-25 19:48:04] 2025-05-25 23:47:44,766 | INFO     | event service: False
[2025-05-25 19:48:04] 2025-05-25 23:47:44,766 | INFO     | sizes: {0: 2392913, 1: 2393598, 2: 2393797, 13: 2393797, 24: 2393853, 35: 2393881, 46: 2394037, 55: 2394271, 57: 2394299, 26175: 2429806, 26183: 2438747, 26186: 24
[2025-05-25 19:48:04] 2025-05-25 23:47:44,766 | INFO     | --------------------------------------------------
[2025-05-25 19:48:04] 2025-05-25 23:47:44,766 | INFO     | 
[2025-05-25 19:48:04] 2025-05-25 23:47:44,766 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-25 19:48:04] 2025-05-25 23:47:45,124 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,124 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,124 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,124 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,125 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 19:48:04] 2025-05-25 23:47:45,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,126 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 19:48:04] 2025-05-25 23:47:45,126 | INFO     | job 6665720128 has completed (purged errors)
[2025-05-25 19:48:04] 2025-05-25 23:47:45,126 | INFO     | overall cleanup function is called
[2025-05-25 19:48:04] 2025-05-25 23:47:46,139 | INFO     | --- collectZombieJob: --- 10, [16800]
[2025-05-25 19:48:04] 2025-05-25 23:47:46,139 | INFO     | zombie collector waiting for pid 16800
[2025-05-25 19:48:04] 2025-05-25 23:47:46,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 19:48:04] 2025-05-25 23:47:46,140 | INFO     | collected zombie processes
[2025-05-25 19:48:04] 2025-05-25 23:47:46,140 | INFO     | will attempt to kill all subprocesses of pid=16800
[2025-05-25 19:48:04] 2025-05-25 23:47:47,164 | INFO     | process IDs to be killed: [16800] (in reverse order)
[2025-05-25 19:48:04] 2025-05-25 23:47:47,989 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 19:48:04] 2025-05-25 23:47:47,990 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 19:48:04] 2025-05-25 23:47:48,002 | INFO     | did not find any defunct processes belonging to 16800
[2025-05-25 19:48:04] 2025-05-25 23:47:48,013 | INFO     | did not find any defunct processes belonging to 16800
[2025-05-25 19:48:04] 2025-05-25 23:47:48,013 | INFO     | ready for new job
[2025-05-25 19:48:04] 2025-05-25 23:47:48,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 19:48:04] 2025-05-25 23:47:48,015 | INFO     | **************************************
[2025-05-25 19:48:04] 2025-05-25 23:47:48,015 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 19:48:04] 2025-05-25 23:47:48,015 | INFO     | **************************************
[2025-05-25 19:48:04] 2025-05-25 23:47:48,015 | INFO     | 
[2025-05-25 19:48:04] 2025-05-25 23:47:48,020 | INFO     | architecture information:
[2025-05-25 19:48:04] 2025-05-25 23:47:48,024 | INFO     | executing command: cat /etc/os-release
[2025-05-25 19:48:04] 2025-05-25 23:47:48,168 | INFO     | cat /etc/os-release:
[2025-05-25 19:48:04] NAME="CentOS Linux"
[2025-05-25 19:48:04] VERSION="7 (Core)"
[2025-05-25 19:48:04] ID="centos"
[2025-05-25 19:48:04] ID_LIKE="rhel fedora"
[2025-05-25 19:48:04] VERSION_ID="7"
[2025-05-25 19:48:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 19:48:04] ANSI_COLOR="0;31"
[2025-05-25 19:48:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 19:48:04] HOME_URL="https://www.centos.org/"
[2025-05-25 19:48:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 19:48:04] 
[2025-05-25 19:48:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 19:48:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 19:48:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 19:48:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 19:48:04] 
[2025-05-25 19:48:04] 2025-05-25 23:47:48,169 | INFO     | **************************************
[2025-05-25 19:48:04] 2025-05-25 23:47:48,672 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-25 19:48:04] 2025-05-25 23:47:48,826 | INFO     | sufficient remaining disk space (103658029056 B)
[2025-05-25 19:48:04] 2025-05-25 23:47:48,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 19:48:04] 2025-05-25 23:47:48,827 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 19:48:04] 2025-05-25 23:47:48,827 | INFO     | update_server=False
[2025-05-25 19:48:04] 2025-05-25 23:47:48,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 19:48:04] 2025-05-25 23:47:48,910 | INFO     | all job control threads have been joined
[2025-05-25 19:48:04] 2025-05-25 23:47:49,014 | INFO     | all payload control threads have been joined
[2025-05-25 19:48:04] 2025-05-25 23:47:49,241 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 19:48:04] 2025-05-25 23:47:49,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 19:48:04] 2025-05-25 23:47:49,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 19:48:04] 2025-05-25 23:47:49,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 19:48:04] 2025-05-25 23:47:49,312 | INFO     | aborting loop
[2025-05-25 19:48:04] 2025-05-25 23:47:49,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 19:48:04] 2025-05-25 23:47:49,589 | INFO     | all data control threads have been joined
[2025-05-25 19:48:04] 2025-05-25 23:47:49,845 | INFO     | [job] retrieve thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:49,916 | INFO     | [job] control thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:50,020 | INFO     | [payload] control thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:50,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 19:48:04] 2025-05-25 23:47:50,331 | INFO     | [job] job monitor thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:50,512 | INFO     | [job] validate thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:50,516 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:50,520 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:50,561 | INFO     | [job] queue monitor thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:50,570 | INFO     | [payload] failed_post thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:50,595 | INFO     | [data] control thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:51,213 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:51,245 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:51,293 | INFO     | [payload] validate_post thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:51,345 | INFO     | [data] copytool_in thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:52,122 | INFO     | [data] copytool_out thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:52,206 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 19:48:04] 2025-05-25 23:47:56,215 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 19:48:04] 2025-05-25 23:47:56,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639032977216)>', '<ExcThread(monitor, started 139638370985728)>']
[2025-05-25 19:48:04] 2025-05-25 23:47:57,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 19:48:04] 2025-05-25 23:47:57,289 | INFO     | [monitor] control thread has ended
[2025-05-25 19:48:04] 2025-05-25 23:48:01,479 | INFO     | all workflow threads have been joined
[2025-05-25 19:48:04] 2025-05-25 23:48:01,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 19:48:04] 2025-05-25 23:48:01,480 | INFO     | traces error code: 0
[2025-05-25 19:48:04] 2025-05-25 23:48:01,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 19:48:04] 2025-05-25 23:48:01,766 [wrapper] ==== pilot stdout END ====
[2025-05-25 19:48:04] 2025-05-25 23:48:01,818 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 19:48:04] 2025-05-25 23:48:01,876 [wrapper] pilotpid: 285612
[2025-05-25 19:48:04] 2025-05-25 23:48:01,927 [wrapper] Pilot exit status: 0
[2025-05-25 19:48:04] 2025-05-25 23:48:02,116 [wrapper] pandaids: 6665720128
[2025-05-25 19:48:04] 2025-05-25 23:48:02,463 [wrapper] cleanup supervisor_pilot 234269 285613
[2025-05-25 19:48:04] 2025-05-25 23:48:02,508 [wrapper] Test setup, not cleaning
[2025-05-25 19:48:04] 2025-05-25 23:48:02,552 [wrapper] apfmon messages muted
[2025-05-25 19:48:04] 2025-05-25 23:48:02,581 [wrapper] ==== wrapper stdout END ====
[2025-05-25 19:48:04] 2025-05-25 23:48:02,610 [wrapper] ==== wrapper stderr END ====
[2025-05-25 19:48:04]  *** Error codes and diagnostics ***
[2025-05-25 19:48:04]     "exeErrorCode": 0,
[2025-05-25 19:48:04]     "exeErrorDiag": "",
[2025-05-25 19:48:04]     "pilotErrorCode": 0,
[2025-05-25 19:48:04]     "pilotErrorDiag": "",
[2025-05-25 19:48:04]  *** Listing of results directory ***
[2025-05-25 19:48:04] total 425040
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas    495897 May 25 02:54 pilot3.tar.gz
[2025-05-25 19:48:04] -rwx------ 1 boincer umatlas     37140 May 25 03:07 runpilot2-wrapper.sh
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas      5111 May 25 03:07 queuedata.json
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas       100 May 25 12:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 19:48:04] -rwxr-xr-x 1 boincer umatlas      7986 May 25 12:26 run_atlas
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas       105 May 25 12:26 job.xml
[2025-05-25 19:48:04] -rw-r--r-- 2 boincer umatlas 221238066 May 25 12:26 EVNT.44871834._001225.pool.root.1
[2025-05-25 19:48:04] -rw-r--r-- 2 boincer umatlas     15093 May 25 12:26 start_atlas.sh
[2025-05-25 19:48:04] drwxrwx--x 2 boincer umatlas      4096 May 25 12:26 shared
[2025-05-25 19:48:04] -rw-r--r-- 2 boincer umatlas    508876 May 25 12:26 input.tar.gz
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas         0 May 25 12:26 boinc_lockfile
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas      2559 May 25 12:26 pandaJob.out
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas    990811 May 25 12:28 agis_schedconf.cvmfs.json
[2025-05-25 19:48:04] drwx------ 4 boincer umatlas      4096 May 25 12:28 pilot3
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas 204947240 May 25 19:43 HITS.44871837._030736.pool.root.1
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas       531 May 25 19:44 boinc_task_state.xml
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas      1061 May 25 19:46 memory_monitor_summary.json
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas   1596740 May 25 19:46 agis_ddmendpoints.agis.ALL.json
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas    502584 May 25 19:46 log.44871837._030736.job.log.tgz.1
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas        95 May 25 19:46 pilot_heartbeat.json
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas      6385 May 25 19:47 init_data.xml
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas      7758 May 25 19:47 heartbeat.json
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas        28 May 25 19:48 wrapper_checkpoint.txt
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas      4354 May 25 19:48 pilotlog.txt
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas      8192 May 25 19:48 boinc_mmap_file
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas   2105513 May 25 19:48 log.44871837._030736.job.log.1
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas       357 May 25 19:48 output.list
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas       620 May 25 19:48 runtime_log
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas   2631680 May 25 19:48 result.tar.gz
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas      8670 May 25 19:48 runtime_log.err
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas       663 May 25 19:48 1EqKDmHdKd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUfTKDmSVsD1m.diag
[2025-05-25 19:48:04] -rw-r--r-- 1 boincer umatlas     20920 May 25 19:48 stderr.txt
[2025-05-25 19:48:04] HITS file was successfully produced:
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas 204947240 May 25 19:43 shared/HITS.pool.root.1
[2025-05-25 19:48:04]  *** Contents of shared directory: ***
[2025-05-25 19:48:04] total 419296
[2025-05-25 19:48:04] -rw-r--r-- 2 boincer umatlas 221238066 May 25 12:26 ATLAS.root_0
[2025-05-25 19:48:04] -rw-r--r-- 2 boincer umatlas     15093 May 25 12:26 start_atlas.sh
[2025-05-25 19:48:04] -rw-r--r-- 2 boincer umatlas    508876 May 25 12:26 input.tar.gz
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas 204947240 May 25 19:43 HITS.pool.root.1
[2025-05-25 19:48:04] -rw------- 1 boincer umatlas   2631680 May 25 19:48 result.tar.gz
19:48:05 (263875): run_atlas exited; CPU time 59478.977307
19:48:05 (263875): called boinc_finish(0)

</stderr_txt>
]]>

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