Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:22:07 (49754): wrapper (7.7.26015): starting
12:22:07 (49754): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 12:22:07] Arguments: --nthreads 8
[2025-05-25 12:22:07] Threads: 8
[2025-05-25 12:22:07] Checking for CVMFS
[2025-05-25 12:22:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 12:22:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 12:22:07] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 12:22:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 12:22:07] 2.12.6.0 4103777 9138 334184 146408 1 426 28674725 32503808 35202 16776704 0 64653482 99.533 74833556 21138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 12:22:07] CVMFS is ok
[2025-05-25 12:22:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 12:22:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 12:22:07] Further information can be found at the LHC@home message board.
[2025-05-25 12:22:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 12:22:07] Checking for apptainer binary...
[2025-05-25 12:22:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 12:22:07] Running /usr/bin/apptainer --version
[2025-05-25 12:22:07] apptainer version 1.4.1-1.el9
[2025-05-25 12:22:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 12:22:08] c7-7-36.aglt2.org
[2025-05-25 12:22:08] apptainer works
[2025-05-25 12:22:08] Set ATHENA_PROC_NUMBER=8
[2025-05-25 12:22:08] Set ATHENA_CORE_NUMBER=8
[2025-05-25 12:22:08] Starting ATLAS job with PandaID=6665720170
[2025-05-25 12:22:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 17:41:13]  *** The last 200 lines of the pilot log: ***
[2025-05-25 17:41:13] 2025-05-25 21:40:49,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 17:41:13] 2025-05-25 21:40:52,143 | INFO     | monitor loop #1170: job 0:6665720170 is in state 'finished'
[2025-05-25 17:41:13] 2025-05-25 21:40:52,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 17:41:13] 2025-05-25 21:40:54,648 | INFO     | monitor loop #1171: job 0:6665720170 is in state 'finished'
[2025-05-25 17:41:13] 2025-05-25 21:40:54,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 17:41:13] 2025-05-25 21:40:56,575 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 17:41:13] 2025-05-25 21:40:56,608 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6665720170/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 17:41:13] 2025-05-25 21:40:56,609 | INFO     | extracted standard info from prmon json
[2025-05-25 17:41:13] 2025-05-25 21:40:56,609 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 17:41:13] 2025-05-25 21:40:56,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 17:41:13] 2025-05-25 21:40:56,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 17:41:13] 2025-05-25 21:40:56,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 17:41:13] 2025-05-25 21:40:56,649 | INFO     | fitting pss+swap vs Time
[2025-05-25 17:41:13] 2025-05-25 21:40:56,650 | INFO     | sum of square deviations: 9417739636.717913
[2025-05-25 17:41:13] 2025-05-25 21:40:56,692 | INFO     | sum of deviations: 23007998767.53848
[2025-05-25 17:41:13] 2025-05-25 21:40:56,693 | INFO     | mean x: 1748199700.5641026
[2025-05-25 17:41:13] 2025-05-25 21:40:56,693 | INFO     | mean y: 2216666.298076923
[2025-05-25 17:41:13] 2025-05-25 21:40:56,693 | INFO     | -- intersect: -4268720746.2388024
[2025-05-25 17:41:13] 2025-05-25 21:40:56,693 | INFO     | intersect: -4268720746.2388024
[2025-05-25 17:41:13] 2025-05-25 21:40:56,693 | INFO     | chi2: 2.00740783693794
[2025-05-25 17:41:13] 2025-05-25 21:40:56,694 | INFO     | sum of square deviations: 8972193196.69707
[2025-05-25 17:41:13] 2025-05-25 21:40:56,695 | INFO     | sum of deviations: 33763387233.986958
[2025-05-25 17:41:13] 2025-05-25 21:40:56,695 | INFO     | mean x: 1748199548.0651467
[2025-05-25 17:41:13] 2025-05-25 21:40:56,696 | INFO     | mean y: 2220310.4006514656
[2025-05-25 17:41:13] 2025-05-25 21:40:56,696 | INFO     | -- intersect: -6576454157.435534
[2025-05-25 17:41:13] 2025-05-25 21:40:56,696 | INFO     | intersect: -6576454157.435534
[2025-05-25 17:41:13] 2025-05-25 21:40:56,741 | INFO     | chi2: 1.875754779007857
[2025-05-25 17:41:13] 2025-05-25 21:40:56,743 | INFO     | current chi2=1.875754779007857 (change=6.558361261102973 %)
[2025-05-25 17:41:13] 2025-05-25 21:40:56,743 | INFO     | right removable region: 306
[2025-05-25 17:41:13] 2025-05-25 21:40:56,744 | INFO     | sum of square deviations: 8972180996.697073
[2025-05-25 17:41:13] 2025-05-25 21:40:56,809 | INFO     | sum of deviations: -26289824763.338757
[2025-05-25 17:41:13] 2025-05-25 21:40:56,809 | INFO     | mean x: 1748199853.0651467
[2025-05-25 17:41:13] 2025-05-25 21:40:56,809 | INFO     | mean y: 2233450.4169381107
[2025-05-25 17:41:13] 2025-05-25 21:40:56,810 | INFO     | -- intersect: 5124719031.715004
[2025-05-25 17:41:13] 2025-05-25 21:40:56,810 | INFO     | intersect: 5124719031.715004
[2025-05-25 17:41:13] 2025-05-25 21:40:56,810 | INFO     | chi2: 0.41377060886673267
[2025-05-25 17:41:13] 2025-05-25 21:40:56,810 | INFO     | current chi2=0.41377060886673267 (change=79.38781540786002 %)
[2025-05-25 17:41:13] 2025-05-25 21:40:56,810 | INFO     | sum of square deviations: 8540901694.175547
[2025-05-25 17:41:13] 2025-05-25 21:40:56,856 | INFO     | sum of deviations: -38302992522.50328
[2025-05-25 17:41:13] 2025-05-25 21:40:56,856 | INFO     | mean x: 1748200005.566225
[2025-05-25 17:41:13] 2025-05-25 21:40:56,856 | INFO     | mean y: 2237700.2251655627
[2025-05-25 17:41:13] 2025-05-25 21:40:56,856 | INFO     | -- intersect: 7842310579.966593
[2025-05-25 17:41:13] 2025-05-25 21:40:56,856 | INFO     | intersect: 7842310579.966593
[2025-05-25 17:41:13] 2025-05-25 21:40:56,857 | INFO     | chi2: 0.32832438049210483
[2025-05-25 17:41:13] 2025-05-25 21:40:56,857 | INFO     | current chi2=0.32832438049210483 (change=20.650627798009786 %)
[2025-05-25 17:41:13] 2025-05-25 21:40:56,857 | INFO     | left removable region: 20
[2025-05-25 17:41:13] 2025-05-25 21:40:56,857 | INFO     | sum of square deviations: 7254070826.101455
[2025-05-25 17:41:13] 2025-05-25 21:40:56,904 | INFO     | sum of deviations: -24492164281.461548
[2025-05-25 17:41:13] 2025-05-25 21:40:56,905 | INFO     | mean x: 1748200127.56993
[2025-05-25 17:41:13] 2025-05-25 21:40:56,905 | INFO     | mean y: 2240977.923076923
[2025-05-25 17:41:13] 2025-05-25 21:40:56,905 | INFO     | -- intersect: 5904748100.85476
[2025-05-25 17:41:13] 2025-05-25 21:40:56,905 | INFO     | intersect: 5904748100.85476
[2025-05-25 17:41:13] 2025-05-25 21:40:56,905 | INFO     | chi2: 0.1457076148825339
[2025-05-25 17:41:13] 2025-05-25 21:40:56,905 | INFO     | -- intersect: 5904748100.85476
[2025-05-25 17:41:13] 2025-05-25 21:40:56,905 | INFO     | current memory leak: -3.38 B/s (using 286 data points, chi2=0.15)
[2025-05-25 17:41:13] 2025-05-25 21:40:56,906 | INFO     | ..............................
[2025-05-25 17:41:13] 2025-05-25 21:40:56,906 | INFO     | . Timing measurements:
[2025-05-25 17:41:13] 2025-05-25 21:40:56,906 | INFO     | . get job = 0 s
[2025-05-25 17:41:13] 2025-05-25 21:40:56,906 | INFO     | . initial setup = 3 s
[2025-05-25 17:41:13] 2025-05-25 21:40:56,906 | INFO     | . payload setup = 15 s
[2025-05-25 17:41:13] 2025-05-25 21:40:56,906 | INFO     | . stage-in = 0 s
[2025-05-25 17:41:13] 2025-05-25 21:40:56,906 | INFO     | . payload execution = 19028 s
[2025-05-25 17:41:13] 2025-05-25 21:40:56,906 | INFO     | . stage-out = 4 s
[2025-05-25 17:41:13] 2025-05-25 21:40:56,907 | INFO     | . log creation = 0 s
[2025-05-25 17:41:13] 2025-05-25 21:40:56,907 | INFO     | ..............................
[2025-05-25 17:41:13] 2025-05-25 21:40:57,602 | INFO     | 
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | job summary report
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | --------------------------------------------------
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | PanDA job id: 6665720170
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | task id: 44871837
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | errors: (none)
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | pilot state: finished 
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | transexitcode: 0
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | exeerrorcode: 0
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | exeerrordiag: 
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | exitcode: 0
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | exitmsg: OK
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | cpuconsumptiontime: 40116 s
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | nevents: 400
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | neventsw: 0
[2025-05-25 17:41:13] 2025-05-25 21:40:57,603 | INFO     | pid: 63507
[2025-05-25 17:41:13] 2025-05-25 21:40:57,604 | INFO     | pgrp: 63507
[2025-05-25 17:41:13] 2025-05-25 21:40:57,604 | INFO     | corecount: 8
[2025-05-25 17:41:13] 2025-05-25 21:40:57,604 | INFO     | event service: False
[2025-05-25 17:41:13] 2025-05-25 21:40:57,604 | INFO     | sizes: {0: 2392913, 1: 2393598, 2: 2393797, 13: 2394059, 24: 2394059, 19049: 2426815, 19054: 2435756, 19056: 2435812, 19071: 2435982}
[2025-05-25 17:41:13] 2025-05-25 21:40:57,604 | INFO     | --------------------------------------------------
[2025-05-25 17:41:13] 2025-05-25 21:40:57,604 | INFO     | 
[2025-05-25 17:41:13] 2025-05-25 21:40:57,604 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-25 17:41:13] 2025-05-25 21:40:57,641 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,642 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,642 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,642 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,643 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 17:41:13] 2025-05-25 21:40:57,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 17:41:13] 2025-05-25 21:40:57,643 | INFO     | job 6665720170 has completed (purged errors)
[2025-05-25 17:41:13] 2025-05-25 21:40:57,643 | INFO     | overall cleanup function is called
[2025-05-25 17:41:13] 2025-05-25 21:40:58,653 | INFO     | --- collectZombieJob: --- 10, [63507]
[2025-05-25 17:41:13] 2025-05-25 21:40:58,653 | INFO     | zombie collector waiting for pid 63507
[2025-05-25 17:41:13] 2025-05-25 21:40:58,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 17:41:13] 2025-05-25 21:40:58,654 | INFO     | collected zombie processes
[2025-05-25 17:41:13] 2025-05-25 21:40:58,654 | INFO     | will attempt to kill all subprocesses of pid=63507
[2025-05-25 17:41:13] 2025-05-25 21:41:01,151 | INFO     | process IDs to be killed: [63507] (in reverse order)
[2025-05-25 17:41:13] 2025-05-25 21:41:01,373 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 17:41:13] 2025-05-25 21:41:01,373 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 17:41:13] 2025-05-25 21:41:01,406 | INFO     | did not find any defunct processes belonging to 63507
[2025-05-25 17:41:13] 2025-05-25 21:41:01,432 | INFO     | did not find any defunct processes belonging to 63507
[2025-05-25 17:41:13] 2025-05-25 21:41:01,433 | INFO     | ready for new job
[2025-05-25 17:41:13] 2025-05-25 21:41:01,433 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 17:41:13] 2025-05-25 21:41:01,453 | INFO     | **************************************
[2025-05-25 17:41:13] 2025-05-25 21:41:01,454 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 17:41:13] 2025-05-25 21:41:01,454 | INFO     | **************************************
[2025-05-25 17:41:13] 2025-05-25 21:41:01,454 | INFO     | 
[2025-05-25 17:41:13] 2025-05-25 21:41:01,480 | INFO     | architecture information:
[2025-05-25 17:41:13] 2025-05-25 21:41:01,484 | INFO     | executing command: cat /etc/os-release
[2025-05-25 17:41:13] 2025-05-25 21:41:01,542 | INFO     | cat /etc/os-release:
[2025-05-25 17:41:13] NAME="CentOS Linux"
[2025-05-25 17:41:13] VERSION="7 (Core)"
[2025-05-25 17:41:13] ID="centos"
[2025-05-25 17:41:13] ID_LIKE="rhel fedora"
[2025-05-25 17:41:13] VERSION_ID="7"
[2025-05-25 17:41:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 17:41:13] ANSI_COLOR="0;31"
[2025-05-25 17:41:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 17:41:13] HOME_URL="https://www.centos.org/"
[2025-05-25 17:41:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 17:41:13] 
[2025-05-25 17:41:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 17:41:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 17:41:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 17:41:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 17:41:13] 
[2025-05-25 17:41:13] 2025-05-25 21:41:01,542 | INFO     | **************************************
[2025-05-25 17:41:13] 2025-05-25 21:41:02,046 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-25 17:41:13] 2025-05-25 21:41:02,174 | INFO     | sufficient remaining disk space (93778345984 B)
[2025-05-25 17:41:13] 2025-05-25 21:41:02,174 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 17:41:13] 2025-05-25 21:41:02,174 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 17:41:13] 2025-05-25 21:41:02,174 | INFO     | update_server=False
[2025-05-25 17:41:13] 2025-05-25 21:41:02,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 17:41:13] 2025-05-25 21:41:02,175 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 17:41:13] 2025-05-25 21:41:02,175 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 17:41:13] 2025-05-25 21:41:02,175 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 17:41:13] 2025-05-25 21:41:02,175 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 17:41:13] 2025-05-25 21:41:02,175 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 17:41:13] 2025-05-25 21:41:02,241 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 17:41:13] 2025-05-25 21:41:02,241 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 17:41:13] 2025-05-25 21:41:02,242 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 17:41:13] 2025-05-25 21:41:02,242 | INFO     | will abort loop
[2025-05-25 17:41:13] 2025-05-25 21:41:02,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 17:41:13] 2025-05-25 21:41:02,686 | INFO     | all data control threads have been joined
[2025-05-25 17:41:13] 2025-05-25 21:41:02,853 | INFO     | all job control threads have been joined
[2025-05-25 17:41:13] 2025-05-25 21:41:02,894 | INFO     | all payload control threads have been joined
[2025-05-25 17:41:13] 2025-05-25 21:41:03,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 17:41:13] 2025-05-25 21:41:03,181 | INFO     | [job] retrieve thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:03,252 | INFO     | [job] job monitor thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:03,405 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:03,444 | INFO     | [payload] validate_post thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:03,639 | INFO     | [job] queue monitor thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:03,701 | INFO     | [data] control thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:03,859 | INFO     | [job] control thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:03,901 | INFO     | [payload] control thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:04,134 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:04,195 | INFO     | [data] copytool_out thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:04,578 | INFO     | [job] validate thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:04,579 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:04,591 | INFO     | [payload] failed_post thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:04,634 | INFO     | [data] copytool_in thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:04,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:07,059 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 17:41:13] 2025-05-25 21:41:07,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139930200504128)>', '<ExcThread(monitor, started 139929849927424)>']
[2025-05-25 17:41:13] 2025-05-25 21:41:08,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 17:41:13] 2025-05-25 21:41:08,219 | INFO     | [monitor] control thread has ended
[2025-05-25 17:41:13] 2025-05-25 21:41:12,803 | INFO     | all workflow threads have been joined
[2025-05-25 17:41:13] 2025-05-25 21:41:12,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 17:41:13] 2025-05-25 21:41:12,804 | INFO     | traces error code: 0
[2025-05-25 17:41:13] 2025-05-25 21:41:12,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 17:41:13] 2025-05-25 21:41:13,066 [wrapper] ==== pilot stdout END ====
[2025-05-25 17:41:13] 2025-05-25 21:41:13,075 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 17:41:13] 2025-05-25 21:41:13,095 [wrapper] pilotpid: 53639
[2025-05-25 17:41:13] 2025-05-25 21:41:13,106 [wrapper] Pilot exit status: 0
[2025-05-25 17:41:13] 2025-05-25 21:41:13,169 [wrapper] pandaids: 6665720170
[2025-05-25 17:41:13] 2025-05-25 21:41:13,354 [wrapper] cleanup supervisor_pilot 3630429 53640
[2025-05-25 17:41:13] 2025-05-25 21:41:13,360 [wrapper] Test setup, not cleaning
[2025-05-25 17:41:13] 2025-05-25 21:41:13,364 [wrapper] apfmon messages muted
[2025-05-25 17:41:13] 2025-05-25 21:41:13,370 [wrapper] ==== wrapper stdout END ====
[2025-05-25 17:41:13] 2025-05-25 21:41:13,373 [wrapper] ==== wrapper stderr END ====
[2025-05-25 17:41:13]  *** Error codes and diagnostics ***
[2025-05-25 17:41:13]     "exeErrorCode": 0,
[2025-05-25 17:41:13]     "exeErrorDiag": "",
[2025-05-25 17:41:13]     "pilotErrorCode": 0,
[2025-05-25 17:41:13]     "pilotErrorDiag": "",
[2025-05-25 17:41:13]  *** Listing of results directory ***
[2025-05-25 17:41:13] total 419260
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas    495897 May 25 02:54 pilot3.tar.gz
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas      5111 May 25 03:07 queuedata.json
[2025-05-25 17:41:13] -rwx------. 1 boincer umatlas     37140 May 25 03:07 runpilot2-wrapper.sh
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas       100 May 25 12:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 17:41:13] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 12:22 run_atlas
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas       105 May 25 12:22 job.xml
[2025-05-25 17:41:13] -rw-r--r--. 2 boincer umatlas 227548702 May 25 12:22 EVNT.44871834._001227.pool.root.1
[2025-05-25 17:41:13] -rw-r--r--. 2 boincer umatlas     15093 May 25 12:22 start_atlas.sh
[2025-05-25 17:41:13] drwxrwx--x. 2 boincer umatlas      4096 May 25 12:22 shared
[2025-05-25 17:41:13] -rw-r--r--. 2 boincer umatlas    508881 May 25 12:22 input.tar.gz
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas         0 May 25 12:22 boinc_lockfile
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas      2559 May 25 12:22 pandaJob.out
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas    990811 May 25 12:22 agis_schedconf.cvmfs.json
[2025-05-25 17:41:13] drwx------. 4 boincer umatlas      4096 May 25 12:22 pilot3
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas      6935 May 25 17:39 init_data.xml
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas 193950496 May 25 17:40 HITS.44871837._030778.pool.root.1
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas       531 May 25 17:40 boinc_task_state.xml
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas        95 May 25 17:40 pilot_heartbeat.json
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas      1040 May 25 17:40 memory_monitor_summary.json
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas   1596740 May 25 17:40 agis_ddmendpoints.agis.ALL.json
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas    433171 May 25 17:40 log.44871837._030778.job.log.tgz.1
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas      7703 May 25 17:40 heartbeat.json
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas      8192 May 25 17:41 boinc_mmap_file
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas        28 May 25 17:41 wrapper_checkpoint.txt
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas      4662 May 25 17:41 pilotlog.txt
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas   1560480 May 25 17:41 log.44871837._030778.job.log.1
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas       357 May 25 17:41 output.list
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas       620 May 25 17:41 runtime_log
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas   2017280 May 25 17:41 result.tar.gz
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas       660 May 25 17:41 HQsMDmZdKd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtfTKDmXT2Evn.diag
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas      8655 May 25 17:41 runtime_log.err
[2025-05-25 17:41:13] -rw-r--r--. 1 boincer umatlas     21154 May 25 17:41 stderr.txt
[2025-05-25 17:41:13] HITS file was successfully produced:
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas 193950496 May 25 17:40 shared/HITS.pool.root.1
[2025-05-25 17:41:13]  *** Contents of shared directory: ***
[2025-05-25 17:41:13] total 414120
[2025-05-25 17:41:13] -rw-r--r--. 2 boincer umatlas 227548702 May 25 12:22 ATLAS.root_0
[2025-05-25 17:41:13] -rw-r--r--. 2 boincer umatlas     15093 May 25 12:22 start_atlas.sh
[2025-05-25 17:41:13] -rw-r--r--. 2 boincer umatlas    508881 May 25 12:22 input.tar.gz
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas 193950496 May 25 17:40 HITS.pool.root.1
[2025-05-25 17:41:13] -rw-------. 1 boincer umatlas   2017280 May 25 17:41 result.tar.gz
17:41:15 (49754): run_atlas exited; CPU time 40876.783357
17:41:15 (49754): called boinc_finish(0)

</stderr_txt>
]]>

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