Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:31:23 (16428): wrapper (7.7.26015): starting
12:31:23 (16428): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 12:31:23] Arguments: --nthreads 8
[2025-05-25 12:31:23] Threads: 8
[2025-05-25 12:31:23] Checking for CVMFS
[2025-05-25 12:31:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 12:31:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 12:31:24] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 12:31:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 12:31:25] 2.11.2.0 7109 14626 179960 146408 1 602 15874582 18432000 23668 130560 0 51770686 99.222 76758569 33654 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 12:31:25] CVMFS is ok
[2025-05-25 12:31:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 12:31:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 12:31:25] Further information can be found at the LHC@home message board.
[2025-05-25 12:31:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 12:31:25] Checking for apptainer binary...
[2025-05-25 12:31:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 12:31:25] Running /usr/bin/apptainer --version
[2025-05-25 12:31:25] apptainer version 1.3.2-1.el7
[2025-05-25 12:31:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 12:31:43] c-211-35-2.aglt2.org
[2025-05-25 12:31:43] apptainer works
[2025-05-25 12:31:43] Set ATHENA_PROC_NUMBER=8
[2025-05-25 12:31:43] Set ATHENA_CORE_NUMBER=8
[2025-05-25 12:31:43] Starting ATLAS job with PandaID=6665725017
[2025-05-25 12:31:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 19:57:52]  *** The last 200 lines of the pilot log: ***
[2025-05-25 19:57:52] 2025-05-25 23:57:36,133 | INFO     | mean y: 2423449.361111111
[2025-05-25 19:57:52] 2025-05-25 23:57:36,133 | INFO     | -- intersect: -25688345618.579372
[2025-05-25 19:57:52] 2025-05-25 23:57:36,133 | INFO     | intersect: -25688345618.579372
[2025-05-25 19:57:52] 2025-05-25 23:57:36,134 | INFO     | chi2: 9.947114001562776
[2025-05-25 19:57:52] 2025-05-25 23:57:36,135 | INFO     | sum of square deviations: 24141359854.965073
[2025-05-25 19:57:52] 2025-05-25 23:57:36,139 | INFO     | sum of deviations: 392126296007.0254
[2025-05-25 19:57:52] 2025-05-25 23:57:36,139 | INFO     | mean x: 1748204062.2271662
[2025-05-25 19:57:52] 2025-05-25 23:57:36,139 | INFO     | mean y: 2427798.566744731
[2025-05-25 19:57:52] 2025-05-25 23:57:36,140 | INFO     | -- intersect: -28393519559.16199
[2025-05-25 19:57:52] 2025-05-25 23:57:36,140 | INFO     | intersect: -28393519559.16199
[2025-05-25 19:57:52] 2025-05-25 23:57:36,140 | INFO     | chi2: 9.170529316154102
[2025-05-25 19:57:52] 2025-05-25 23:57:36,140 | INFO     | current chi2=9.170529316154102 (change=7.807135670574053 %)
[2025-05-25 19:57:52] 2025-05-25 23:57:36,141 | INFO     | right removable region: 426
[2025-05-25 19:57:52] 2025-05-25 23:57:36,141 | INFO     | sum of square deviations: 24141300684.965076
[2025-05-25 19:57:52] 2025-05-25 23:57:36,146 | INFO     | sum of deviations: 212693142297.3208
[2025-05-25 19:57:52] 2025-05-25 23:57:36,146 | INFO     | mean x: 1748204367.2271662
[2025-05-25 19:57:52] 2025-05-25 23:57:36,146 | INFO     | mean y: 2450937.0585480095
[2025-05-25 19:57:52] 2025-05-25 23:57:36,146 | INFO     | -- intersect: -15399829374.831087
[2025-05-25 19:57:52] 2025-05-25 23:57:36,146 | INFO     | intersect: -15399829374.831087
[2025-05-25 19:57:52] 2025-05-25 23:57:36,147 | INFO     | chi2: 4.798053809358948
[2025-05-25 19:57:52] 2025-05-25 23:57:36,147 | INFO     | current chi2=4.798053809358948 (change=51.76436292370698 %)
[2025-05-25 19:57:52] 2025-05-25 23:57:36,148 | INFO     | sum of square deviations: 23303106547.20375
[2025-05-25 19:57:52] 2025-05-25 23:57:36,152 | INFO     | sum of deviations: 84944009713.12813
[2025-05-25 19:57:52] 2025-05-25 23:57:36,152 | INFO     | mean x: 1748204519.729858
[2025-05-25 19:57:52] 2025-05-25 23:57:36,152 | INFO     | mean y: 2474164.6327014216
[2025-05-25 19:57:52] 2025-05-25 23:57:36,152 | INFO     | -- intersect: -6370045370.63444
[2025-05-25 19:57:52] 2025-05-25 23:57:36,152 | INFO     | intersect: -6370045370.63444
[2025-05-25 19:57:52] 2025-05-25 23:57:36,153 | INFO     | chi2: 1.4826645532830376
[2025-05-25 19:57:52] 2025-05-25 23:57:36,153 | INFO     | current chi2=1.4826645532830376 (change=69.09862598058 %)
[2025-05-25 19:57:52] 2025-05-25 23:57:36,154 | INFO     | sum of square deviations: 22484540684.43651
[2025-05-25 19:57:52] 2025-05-25 23:57:36,158 | INFO     | sum of deviations: 33660504902.460396
[2025-05-25 19:57:52] 2025-05-25 23:57:36,159 | INFO     | mean x: 1748204672.2326138
[2025-05-25 19:57:52] 2025-05-25 23:57:36,159 | INFO     | mean y: 2483700.201438849
[2025-05-25 19:57:52] 2025-05-25 23:57:36,159 | INFO     | -- intersect: -2614667913.703758
[2025-05-25 19:57:52] 2025-05-25 23:57:36,159 | INFO     | intersect: -2614667913.703758
[2025-05-25 19:57:52] 2025-05-25 23:57:36,160 | INFO     | chi2: 0.9233623321106765
[2025-05-25 19:57:52] 2025-05-25 23:57:36,160 | INFO     | current chi2=0.9233623321106765 (change=37.7227755215371 %)
[2025-05-25 19:57:52] 2025-05-25 23:57:36,160 | INFO     | sum of square deviations: 21685370534.162594
[2025-05-25 19:57:52] 2025-05-25 23:57:36,165 | INFO     | sum of deviations: 15045850788.422344
[2025-05-25 19:57:52] 2025-05-25 23:57:36,165 | INFO     | mean x: 1748204824.735437
[2025-05-25 19:57:52] 2025-05-25 23:57:36,165 | INFO     | mean y: 2487240.8203883497
[2025-05-25 19:57:52] 2025-05-25 23:57:36,165 | INFO     | -- intersect: -1210460857.0288951
[2025-05-25 19:57:52] 2025-05-25 23:57:36,165 | INFO     | intersect: -1210460857.0288951
[2025-05-25 19:57:52] 2025-05-25 23:57:36,166 | INFO     | chi2: 0.8445889452276313
[2025-05-25 19:57:52] 2025-05-25 23:57:36,166 | INFO     | current chi2=0.8445889452276313 (change=8.531145807408059 %)
[2025-05-25 19:57:52] 2025-05-25 23:57:36,166 | INFO     | left removable region: 40
[2025-05-25 19:57:52] 2025-05-25 23:57:36,167 | INFO     | sum of square deviations: 17833542274.57257
[2025-05-25 19:57:52] 2025-05-25 23:57:36,170 | INFO     | sum of deviations: 41745870408.59065
[2025-05-25 19:57:52] 2025-05-25 23:57:36,171 | INFO     | mean x: 1748205251.738342
[2025-05-25 19:57:52] 2025-05-25 23:57:36,171 | INFO     | mean y: 2492712.797927461
[2025-05-25 19:57:52] 2025-05-25 23:57:36,171 | INFO     | -- intersect: -4089815408.7771845
[2025-05-25 19:57:52] 2025-05-25 23:57:36,171 | INFO     | intersect: -4089815408.7771845
[2025-05-25 19:57:52] 2025-05-25 23:57:36,171 | INFO     | chi2: 0.0026618587770018123
[2025-05-25 19:57:52] 2025-05-25 23:57:36,172 | INFO     | -- intersect: -4089815408.7771845
[2025-05-25 19:57:52] 2025-05-25 23:57:36,172 | INFO     | current memory leak: 2.34 B/s (using 386 data points, chi2=0.00)
[2025-05-25 19:57:52] 2025-05-25 23:57:36,172 | INFO     | ..............................
[2025-05-25 19:57:52] 2025-05-25 23:57:36,173 | INFO     | . Timing measurements:
[2025-05-25 19:57:52] 2025-05-25 23:57:36,173 | INFO     | . get job = 0 s
[2025-05-25 19:57:52] 2025-05-25 23:57:36,173 | INFO     | . initial setup = 9 s
[2025-05-25 19:57:52] 2025-05-25 23:57:36,173 | INFO     | . payload setup = 88 s
[2025-05-25 19:57:52] 2025-05-25 23:57:36,173 | INFO     | . stage-in = 0 s
[2025-05-25 19:57:52] 2025-05-25 23:57:36,174 | INFO     | . payload execution = 26405 s
[2025-05-25 19:57:52] 2025-05-25 23:57:36,174 | INFO     | . stage-out = 4 s
[2025-05-25 19:57:52] 2025-05-25 23:57:36,174 | INFO     | . log creation = 0 s
[2025-05-25 19:57:52] 2025-05-25 23:57:36,174 | INFO     | ..............................
[2025-05-25 19:57:52] 2025-05-25 23:57:36,281 | INFO     | 
[2025-05-25 19:57:52] 2025-05-25 23:57:36,281 | INFO     | job summary report
[2025-05-25 19:57:52] 2025-05-25 23:57:36,281 | INFO     | --------------------------------------------------
[2025-05-25 19:57:52] 2025-05-25 23:57:36,281 | INFO     | PanDA job id: 6665725017
[2025-05-25 19:57:52] 2025-05-25 23:57:36,281 | INFO     | task id: 44871837
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | errors: (none)
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | pilot state: finished 
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | transexitcode: 0
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | exeerrorcode: 0
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | exeerrordiag: 
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | exitcode: 0
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | exitmsg: OK
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | cpuconsumptiontime: 59404 s
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | nevents: 400
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | neventsw: 0
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | pid: 52211
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | pgrp: 52211
[2025-05-25 19:57:52] 2025-05-25 23:57:36,282 | INFO     | corecount: 8
[2025-05-25 19:57:52] 2025-05-25 23:57:36,283 | INFO     | event service: False
[2025-05-25 19:57:52] 2025-05-25 23:57:36,283 | INFO     | sizes: {0: 2392913, 1: 2393598, 2: 2393797, 13: 2393797, 24: 2393853, 35: 2393881, 46: 2394271, 56: 2394271, 26498: 2429946, 26504: 2438887, 26507: 2438943, 26545:
[2025-05-25 19:57:52] 2025-05-25 23:57:36,283 | INFO     | --------------------------------------------------
[2025-05-25 19:57:52] 2025-05-25 23:57:36,283 | INFO     | 
[2025-05-25 19:57:52] 2025-05-25 23:57:36,283 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-25 19:57:52] 2025-05-25 23:57:36,311 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,311 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,311 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,311 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,312 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 19:57:52] 2025-05-25 23:57:36,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,313 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 19:57:52] 2025-05-25 23:57:36,313 | INFO     | job 6665725017 has completed (purged errors)
[2025-05-25 19:57:52] 2025-05-25 23:57:36,313 | INFO     | overall cleanup function is called
[2025-05-25 19:57:52] 2025-05-25 23:57:37,321 | INFO     | --- collectZombieJob: --- 10, [52211]
[2025-05-25 19:57:52] 2025-05-25 23:57:37,321 | INFO     | zombie collector waiting for pid 52211
[2025-05-25 19:57:52] 2025-05-25 23:57:37,321 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 19:57:52] 2025-05-25 23:57:37,322 | INFO     | collected zombie processes
[2025-05-25 19:57:52] 2025-05-25 23:57:37,322 | INFO     | will attempt to kill all subprocesses of pid=52211
[2025-05-25 19:57:52] 2025-05-25 23:57:37,830 | INFO     | process IDs to be killed: [52211] (in reverse order)
[2025-05-25 19:57:52] 2025-05-25 23:57:37,995 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 19:57:52] 2025-05-25 23:57:37,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 19:57:52] 2025-05-25 23:57:38,006 | INFO     | did not find any defunct processes belonging to 52211
[2025-05-25 19:57:52] 2025-05-25 23:57:38,018 | INFO     | did not find any defunct processes belonging to 52211
[2025-05-25 19:57:52] 2025-05-25 23:57:38,018 | INFO     | ready for new job
[2025-05-25 19:57:52] 2025-05-25 23:57:38,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 19:57:52] 2025-05-25 23:57:38,020 | INFO     | **************************************
[2025-05-25 19:57:52] 2025-05-25 23:57:38,021 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 19:57:52] 2025-05-25 23:57:38,021 | INFO     | **************************************
[2025-05-25 19:57:52] 2025-05-25 23:57:38,021 | INFO     | 
[2025-05-25 19:57:52] 2025-05-25 23:57:38,026 | INFO     | architecture information:
[2025-05-25 19:57:52] 2025-05-25 23:57:38,026 | INFO     | executing command: cat /etc/os-release
[2025-05-25 19:57:52] 2025-05-25 23:57:38,058 | INFO     | cat /etc/os-release:
[2025-05-25 19:57:52] NAME="CentOS Linux"
[2025-05-25 19:57:52] VERSION="7 (Core)"
[2025-05-25 19:57:52] ID="centos"
[2025-05-25 19:57:52] ID_LIKE="rhel fedora"
[2025-05-25 19:57:52] VERSION_ID="7"
[2025-05-25 19:57:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 19:57:52] ANSI_COLOR="0;31"
[2025-05-25 19:57:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 19:57:52] HOME_URL="https://www.centos.org/"
[2025-05-25 19:57:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 19:57:52] 
[2025-05-25 19:57:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 19:57:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 19:57:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 19:57:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 19:57:52] 
[2025-05-25 19:57:52] 2025-05-25 23:57:38,059 | INFO     | **************************************
[2025-05-25 19:57:52] 2025-05-25 23:57:38,562 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-25 19:57:52] 2025-05-25 23:57:38,695 | INFO     | sufficient remaining disk space (103818461184 B)
[2025-05-25 19:57:52] 2025-05-25 23:57:38,695 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 19:57:52] 2025-05-25 23:57:38,695 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 19:57:52] 2025-05-25 23:57:38,696 | INFO     | update_server=False
[2025-05-25 19:57:52] 2025-05-25 23:57:38,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 19:57:52] 2025-05-25 23:57:38,696 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 19:57:52] 2025-05-25 23:57:38,696 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 19:57:52] 2025-05-25 23:57:38,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 19:57:52] 2025-05-25 23:57:38,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 19:57:52] 2025-05-25 23:57:38,697 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 19:57:52] 2025-05-25 23:57:39,118 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 19:57:52] 2025-05-25 23:57:39,119 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 19:57:52] 2025-05-25 23:57:39,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 19:57:52] 2025-05-25 23:57:39,124 | INFO     | will abort loop
[2025-05-25 19:57:52] 2025-05-25 23:57:39,135 | INFO     | all payload control threads have been joined
[2025-05-25 19:57:52] 2025-05-25 23:57:39,605 | INFO     | all data control threads have been joined
[2025-05-25 19:57:52] 2025-05-25 23:57:39,701 | INFO     | all job control threads have been joined
[2025-05-25 19:57:52] 2025-05-25 23:57:39,703 | INFO     | [job] retrieve thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:39,716 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:39,726 | INFO     | [data] copytool_in thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:39,989 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:40,130 | INFO     | [job] job monitor thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:40,147 | INFO     | [payload] control thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:40,505 | INFO     | [payload] failed_post thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:40,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 19:57:52] 2025-05-25 23:57:40,620 | INFO     | [data] control thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:40,645 | INFO     | [job] validate thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:40,646 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:40,646 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:40,707 | INFO     | [data] copytool_out thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:40,715 | INFO     | [job] control thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:41,143 | INFO     | [payload] validate_post thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:41,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 19:57:52] 2025-05-25 23:57:42,302 | INFO     | [job] queue monitor thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:44,518 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 19:57:52] 2025-05-25 23:57:45,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140334410770240)>', '<ExcThread(monitor, started 140334113724160)>']
[2025-05-25 19:57:52] 2025-05-25 23:57:45,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 19:57:52] 2025-05-25 23:57:45,740 | INFO     | [monitor] control thread has ended
[2025-05-25 19:57:52] 2025-05-25 23:57:50,270 | INFO     | all workflow threads have been joined
[2025-05-25 19:57:52] 2025-05-25 23:57:50,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 19:57:52] 2025-05-25 23:57:50,271 | INFO     | traces error code: 0
[2025-05-25 19:57:52] 2025-05-25 23:57:50,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 19:57:52] 2025-05-25 23:57:50,670 [wrapper] ==== pilot stdout END ====
[2025-05-25 19:57:52] 2025-05-25 23:57:50,702 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 19:57:52] 2025-05-25 23:57:50,729 [wrapper] pilotpid: 31664
[2025-05-25 19:57:52] 2025-05-25 23:57:50,732 [wrapper] Pilot exit status: 0
[2025-05-25 19:57:52] 2025-05-25 23:57:50,875 [wrapper] pandaids: 6665725017
[2025-05-25 19:57:52] 2025-05-25 23:57:51,393 [wrapper] cleanup supervisor_pilot 251056 31665
[2025-05-25 19:57:52] 2025-05-25 23:57:51,433 [wrapper] Test setup, not cleaning
[2025-05-25 19:57:52] 2025-05-25 23:57:51,474 [wrapper] apfmon messages muted
[2025-05-25 19:57:52] 2025-05-25 23:57:51,505 [wrapper] ==== wrapper stdout END ====
[2025-05-25 19:57:52] 2025-05-25 23:57:51,525 [wrapper] ==== wrapper stderr END ====
[2025-05-25 19:57:52]  *** Error codes and diagnostics ***
[2025-05-25 19:57:52]     "exeErrorCode": 0,
[2025-05-25 19:57:52]     "exeErrorDiag": "",
[2025-05-25 19:57:52]     "pilotErrorCode": 0,
[2025-05-25 19:57:52]     "pilotErrorDiag": "",
[2025-05-25 19:57:52]  *** Listing of results directory ***
[2025-05-25 19:57:52] total 427472
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas    495897 May 25 06:33 pilot3.tar.gz
[2025-05-25 19:57:52] -rwx------ 1 boincer umatlas     37140 May 25 06:40 runpilot2-wrapper.sh
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas      5111 May 25 06:40 queuedata.json
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas       100 May 25 12:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 19:57:52] -rwxr-xr-x 1 boincer umatlas      7986 May 25 12:31 run_atlas
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas       105 May 25 12:31 job.xml
[2025-05-25 19:57:52] -rw-r--r-- 2 boincer umatlas 226924273 May 25 12:31 EVNT.44871834._001322.pool.root.1
[2025-05-25 19:57:52] -rw-r--r-- 2 boincer umatlas     15093 May 25 12:31 start_atlas.sh
[2025-05-25 19:57:52] drwxrwx--x 2 boincer umatlas      4096 May 25 12:31 shared
[2025-05-25 19:57:52] -rw-r--r-- 2 boincer umatlas    508874 May 25 12:31 input.tar.gz
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas         0 May 25 12:31 boinc_lockfile
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas      2559 May 25 12:31 pandaJob.out
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas    990811 May 25 12:33 agis_schedconf.cvmfs.json
[2025-05-25 19:57:52] drwx------ 4 boincer umatlas      4096 May 25 12:33 pilot3
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas 201743129 May 25 19:55 HITS.44871837._033148.pool.root.1
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas      6385 May 25 19:55 init_data.xml
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas       530 May 25 19:55 boinc_task_state.xml
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas      1059 May 25 19:56 memory_monitor_summary.json
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas   1596740 May 25 19:56 agis_ddmendpoints.agis.ALL.json
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas    488133 May 25 19:56 log.44871837._033148.job.log.tgz.1
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas        95 May 25 19:57 pilot_heartbeat.json
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas      7757 May 25 19:57 heartbeat.json
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas      4663 May 25 19:57 pilotlog.txt
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas      8192 May 25 19:57 boinc_mmap_file
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas   2125904 May 25 19:57 log.44871837._033148.job.log.1
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas       357 May 25 19:57 output.list
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas       620 May 25 19:57 runtime_log
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas   2631680 May 25 19:57 result.tar.gz
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas        28 May 25 19:57 wrapper_checkpoint.txt
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas      8670 May 25 19:57 runtime_log.err
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas       663 May 25 19:57 IENLDmvxNd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNxTKDmApqsgm.diag
[2025-05-25 19:57:52] -rw-r--r-- 1 boincer umatlas     20911 May 25 19:57 stderr.txt
[2025-05-25 19:57:52] HITS file was successfully produced:
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas 201743129 May 25 19:55 shared/HITS.pool.root.1
[2025-05-25 19:57:52]  *** Contents of shared directory: ***
[2025-05-25 19:57:52] total 421720
[2025-05-25 19:57:52] -rw-r--r-- 2 boincer umatlas 226924273 May 25 12:31 ATLAS.root_0
[2025-05-25 19:57:52] -rw-r--r-- 2 boincer umatlas     15093 May 25 12:31 start_atlas.sh
[2025-05-25 19:57:52] -rw-r--r-- 2 boincer umatlas    508874 May 25 12:31 input.tar.gz
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas 201743129 May 25 19:55 HITS.pool.root.1
[2025-05-25 19:57:52] -rw------- 1 boincer umatlas   2631680 May 25 19:57 result.tar.gz
19:57:54 (16428): run_atlas exited; CPU time 60341.460104
19:57:54 (16428): called boinc_finish(0)

</stderr_txt>
]]>

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