Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:15:58 (4180248): wrapper (7.7.26015): starting
12:15:58 (4180248): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 12:15:58] Arguments: --nthreads 8
[2025-05-25 12:15:58] Threads: 8
[2025-05-25 12:15:58] Checking for CVMFS
[2025-05-25 12:15:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 12:15:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 12:15:59] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 12:15:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 12:15:59] 2.12.6.0 4103777 9132 342176 146407 0 651 28664439 32503808 34216 16776704 0 64571596 99.533 74832264 21138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 12:15:59] CVMFS is ok
[2025-05-25 12:15:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 12:15:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 12:15:59] Further information can be found at the LHC@home message board.
[2025-05-25 12:15:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 12:15:59] Checking for apptainer binary...
[2025-05-25 12:15:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 12:15:59] Running /usr/bin/apptainer --version
[2025-05-25 12:15:59] apptainer version 1.4.1-1.el9
[2025-05-25 12:15:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 12:16:00] c7-7-36.aglt2.org
[2025-05-25 12:16:00] apptainer works
[2025-05-25 12:16:00] Set ATHENA_PROC_NUMBER=8
[2025-05-25 12:16:00] Set ATHENA_CORE_NUMBER=8
[2025-05-25 12:16:00] Starting ATLAS job with PandaID=6665715923
[2025-05-25 12:16:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 14:46:26]  *** The last 200 lines of the pilot log: ***
[2025-05-25 14:46:26] 2025-05-25 18:46:05,193 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 14:46:26] 2025-05-25 18:46:05,193 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 14:46:26] 2025-05-25 18:46:05,195 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 14:46:26] 2025-05-25 18:46:05,195 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 14:46:26] 2025-05-25 18:46:05,201 | INFO     | fitting pss+swap vs Time
[2025-05-25 14:46:26] 2025-05-25 18:46:05,202 | INFO     | sum of square deviations: 945280888.9931037
[2025-05-25 14:46:26] 2025-05-25 18:46:05,203 | INFO     | sum of deviations: -3170526049.441373
[2025-05-25 14:46:26] 2025-05-25 18:46:05,204 | INFO     | mean x: 1748194335.0068965
[2025-05-25 14:46:26] 2025-05-25 18:46:05,204 | INFO     | mean y: 2156875.4413793106
[2025-05-25 14:46:26] 2025-05-25 18:46:05,205 | INFO     | -- intersect: 5865700445.574468
[2025-05-25 14:46:26] 2025-05-25 18:46:05,206 | INFO     | intersect: 5865700445.574468
[2025-05-25 14:46:26] 2025-05-25 18:46:05,206 | INFO     | chi2: 4.065546278300659
[2025-05-25 14:46:26] 2025-05-25 18:46:05,206 | INFO     | sum of square deviations: 850823608.9928573
[2025-05-25 14:46:26] 2025-05-25 18:46:05,207 | INFO     | sum of deviations: 14257873842.878574
[2025-05-25 14:46:26] 2025-05-25 18:46:05,207 | INFO     | mean x: 1748194182.5071428
[2025-05-25 14:46:26] 2025-05-25 18:46:05,207 | INFO     | mean y: 2184499.6214285716
[2025-05-25 14:46:26] 2025-05-25 18:46:05,207 | INFO     | -- intersect: -29293584733.37635
[2025-05-25 14:46:26] 2025-05-25 18:46:05,207 | INFO     | intersect: -29293584733.37635
[2025-05-25 14:46:26] 2025-05-25 18:46:05,207 | INFO     | chi2: 2.601153670578812
[2025-05-25 14:46:26] 2025-05-25 18:46:05,207 | INFO     | current chi2=2.601153670578812 (change=36.01957787414346 %)
[2025-05-25 14:46:26] 2025-05-25 18:46:05,207 | INFO     | sum of square deviations: 762878078.9925944
[2025-05-25 14:46:26] 2025-05-25 18:46:05,208 | INFO     | sum of deviations: 14763770291.733341
[2025-05-25 14:46:26] 2025-05-25 18:46:05,208 | INFO     | mean x: 1748194030.0074074
[2025-05-25 14:46:26] 2025-05-25 18:46:05,208 | INFO     | mean y: 2185359.2666666666
[2025-05-25 14:46:26] 2025-05-25 18:46:05,208 | INFO     | -- intersect: -33830134371.94362
[2025-05-25 14:46:26] 2025-05-25 18:46:05,208 | INFO     | intersect: -33830134371.94362
[2025-05-25 14:46:26] 2025-05-25 18:46:05,208 | INFO     | chi2: 2.6010954348866915
[2025-05-25 14:46:26] 2025-05-25 18:46:05,209 | INFO     | current chi2=2.6010954348866915 (change=0.002238840895072607 %)
[2025-05-25 14:46:26] 2025-05-25 18:46:05,209 | INFO     | right removable region: 134
[2025-05-25 14:46:26] 2025-05-25 18:46:05,209 | INFO     | sum of square deviations: 850822998.9928573
[2025-05-25 14:46:26] 2025-05-25 18:46:05,209 | INFO     | sum of deviations: -31896892488.764286
[2025-05-25 14:46:26] 2025-05-25 18:46:05,209 | INFO     | mean x: 1748194487.5071428
[2025-05-25 14:46:26] 2025-05-25 18:46:05,210 | INFO     | mean y: 2202899.2642857144
[2025-05-25 14:46:26] 2025-05-25 18:46:05,210 | INFO     | -- intersect: 65541065486.98546
[2025-05-25 14:46:26] 2025-05-25 18:46:05,210 | INFO     | intersect: 65541065486.98546
[2025-05-25 14:46:26] 2025-05-25 18:46:05,210 | INFO     | chi2: 1.7738473658013723
[2025-05-25 14:46:26] 2025-05-25 18:46:05,210 | INFO     | current chi2=1.7738473658013723 (change=56.36878184688098 %)
[2025-05-25 14:46:26] 2025-05-25 18:46:05,210 | INFO     | sum of square deviations: 762876858.9925944
[2025-05-25 14:46:26] 2025-05-25 18:46:05,211 | INFO     | sum of deviations: -34685552805.78517
[2025-05-25 14:46:26] 2025-05-25 18:46:05,211 | INFO     | mean x: 1748194640.0074074
[2025-05-25 14:46:26] 2025-05-25 18:46:05,211 | INFO     | mean y: 2207559.7851851853
[2025-05-25 14:46:26] 2025-05-25 18:46:05,211 | INFO     | -- intersect: 79486985195.90453
[2025-05-25 14:46:26] 2025-05-25 18:46:05,211 | INFO     | intersect: 79486985195.90453
[2025-05-25 14:46:26] 2025-05-25 18:46:05,211 | INFO     | chi2: 1.661256404128412
[2025-05-25 14:46:26] 2025-05-25 18:46:05,211 | INFO     | current chi2=1.661256404128412 (change=6.347274508711466 %)
[2025-05-25 14:46:26] 2025-05-25 18:46:05,211 | INFO     | left removable region: 20
[2025-05-25 14:46:26] 2025-05-25 18:46:05,212 | INFO     | sum of square deviations: 459364252.4912284
[2025-05-25 14:46:26] 2025-05-25 18:46:05,212 | INFO     | sum of deviations: -12199147759.192978
[2025-05-25 14:46:26] 2025-05-25 18:46:05,212 | INFO     | mean x: 1748194609.508772
[2025-05-25 14:46:26] 2025-05-25 18:46:05,212 | INFO     | mean y: 2235532.692982456
[2025-05-25 14:46:26] 2025-05-25 18:46:05,212 | INFO     | -- intersect: 46428321667.093285
[2025-05-25 14:46:26] 2025-05-25 18:46:05,212 | INFO     | intersect: 46428321667.093285
[2025-05-25 14:46:26] 2025-05-25 18:46:05,212 | INFO     | chi2: 0.1123333330200522
[2025-05-25 14:46:26] 2025-05-25 18:46:05,213 | INFO     | -- intersect: 46428321667.093285
[2025-05-25 14:46:26] 2025-05-25 18:46:05,213 | INFO     | current memory leak: -26.56 B/s (using 114 data points, chi2=0.11)
[2025-05-25 14:46:26] 2025-05-25 18:46:05,213 | INFO     | ..............................
[2025-05-25 14:46:26] 2025-05-25 18:46:05,213 | INFO     | . Timing measurements:
[2025-05-25 14:46:26] 2025-05-25 18:46:05,213 | INFO     | . get job = 0 s
[2025-05-25 14:46:26] 2025-05-25 18:46:05,213 | INFO     | . initial setup = 8 s
[2025-05-25 14:46:26] 2025-05-25 18:46:05,213 | INFO     | . payload setup = 45 s
[2025-05-25 14:46:26] 2025-05-25 18:46:05,213 | INFO     | . stage-in = 0 s
[2025-05-25 14:46:26] 2025-05-25 18:46:05,214 | INFO     | . payload execution = 8819 s
[2025-05-25 14:46:26] 2025-05-25 18:46:05,214 | INFO     | . stage-out = 1 s
[2025-05-25 14:46:26] 2025-05-25 18:46:05,214 | INFO     | . log creation = 0 s
[2025-05-25 14:46:26] 2025-05-25 18:46:05,214 | INFO     | ..............................
[2025-05-25 14:46:26] 2025-05-25 18:46:05,351 | INFO     | 
[2025-05-25 14:46:26] 2025-05-25 18:46:05,351 | INFO     | job summary report
[2025-05-25 14:46:26] 2025-05-25 18:46:05,351 | INFO     | --------------------------------------------------
[2025-05-25 14:46:26] 2025-05-25 18:46:05,351 | INFO     | PanDA job id: 6665715923
[2025-05-25 14:46:26] 2025-05-25 18:46:05,351 | INFO     | task id: 44871837
[2025-05-25 14:46:26] 2025-05-25 18:46:05,351 | INFO     | errors: (none)
[2025-05-25 14:46:26] 2025-05-25 18:46:05,351 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 14:46:26] 2025-05-25 18:46:05,351 | INFO     | pilot state: finished 
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | transexitcode: 0
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | exeerrorcode: 0
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | exeerrordiag: 
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | exitcode: 0
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | exitmsg: OK
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | cpuconsumptiontime: 38239 s
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | nevents: 400
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | neventsw: 0
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | pid: 16561
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | pgrp: 16561
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | corecount: 8
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | event service: False
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | sizes: {0: 2392913, 1: 2393598, 2: 2393797, 13: 2393797, 23: 2394059, 24: 2394087, 8870: 2422251, 8873: 2431248, 8892: 2431362}
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | --------------------------------------------------
[2025-05-25 14:46:26] 2025-05-25 18:46:05,352 | INFO     | 
[2025-05-25 14:46:26] 2025-05-25 18:46:05,353 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-25 14:46:26] 2025-05-25 18:46:05,410 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,410 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,410 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,410 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,410 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,411 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,411 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,411 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,411 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,411 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,412 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 14:46:26] 2025-05-25 18:46:05,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,413 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 14:46:26] 2025-05-25 18:46:05,413 | INFO     | job 6665715923 has completed (purged errors)
[2025-05-25 14:46:26] 2025-05-25 18:46:05,413 | INFO     | overall cleanup function is called
[2025-05-25 14:46:26] 2025-05-25 18:46:06,422 | INFO     | --- collectZombieJob: --- 10, [16561]
[2025-05-25 14:46:26] 2025-05-25 18:46:06,423 | INFO     | zombie collector waiting for pid 16561
[2025-05-25 14:46:26] 2025-05-25 18:46:06,423 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 14:46:26] 2025-05-25 18:46:06,423 | INFO     | collected zombie processes
[2025-05-25 14:46:26] 2025-05-25 18:46:06,423 | INFO     | will attempt to kill all subprocesses of pid=16561
[2025-05-25 14:46:26] 2025-05-25 18:46:07,426 | INFO     | process IDs to be killed: [16561] (in reverse order)
[2025-05-25 14:46:26] 2025-05-25 18:46:07,655 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 14:46:26] 2025-05-25 18:46:07,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 14:46:26] 2025-05-25 18:46:07,683 | INFO     | did not find any defunct processes belonging to 16561
[2025-05-25 14:46:26] 2025-05-25 18:46:07,708 | INFO     | did not find any defunct processes belonging to 16561
[2025-05-25 14:46:26] 2025-05-25 18:46:07,708 | INFO     | ready for new job
[2025-05-25 14:46:26] 2025-05-25 18:46:07,708 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 14:46:26] 2025-05-25 18:46:07,710 | INFO     | **************************************
[2025-05-25 14:46:26] 2025-05-25 18:46:07,710 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 14:46:26] 2025-05-25 18:46:07,710 | INFO     | **************************************
[2025-05-25 14:46:26] 2025-05-25 18:46:07,710 | INFO     | 
[2025-05-25 14:46:26] 2025-05-25 18:46:07,715 | INFO     | architecture information:
[2025-05-25 14:46:26] 2025-05-25 18:46:07,717 | INFO     | executing command: cat /etc/os-release
[2025-05-25 14:46:26] 2025-05-25 18:46:07,738 | INFO     | cat /etc/os-release:
[2025-05-25 14:46:26] NAME="CentOS Linux"
[2025-05-25 14:46:26] VERSION="7 (Core)"
[2025-05-25 14:46:26] ID="centos"
[2025-05-25 14:46:26] ID_LIKE="rhel fedora"
[2025-05-25 14:46:26] VERSION_ID="7"
[2025-05-25 14:46:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 14:46:26] ANSI_COLOR="0;31"
[2025-05-25 14:46:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 14:46:26] HOME_URL="https://www.centos.org/"
[2025-05-25 14:46:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 14:46:26] 
[2025-05-25 14:46:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 14:46:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 14:46:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 14:46:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 14:46:26] 
[2025-05-25 14:46:26] 2025-05-25 18:46:07,739 | INFO     | **************************************
[2025-05-25 14:46:26] 2025-05-25 18:46:08,242 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-25 14:46:26] 2025-05-25 18:46:08,279 | INFO     | sufficient remaining disk space (93893689344 B)
[2025-05-25 14:46:26] 2025-05-25 18:46:08,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 14:46:26] 2025-05-25 18:46:08,280 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 14:46:26] 2025-05-25 18:46:08,280 | INFO     | update_server=False
[2025-05-25 14:46:26] 2025-05-25 18:46:08,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 14:46:26] 2025-05-25 18:46:08,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 14:46:26] 2025-05-25 18:46:08,281 | INFO     | aborting loop
[2025-05-25 14:46:26] 2025-05-25 18:46:08,346 | INFO     | all payload control threads have been joined
[2025-05-25 14:46:26] 2025-05-25 18:46:08,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 14:46:26] 2025-05-25 18:46:08,940 | INFO     | all data control threads have been joined
[2025-05-25 14:46:26] 2025-05-25 18:46:09,290 | INFO     | [job] retrieve thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:09,300 | INFO     | [job] job monitor thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:09,358 | INFO     | [payload] control thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:09,414 | INFO     | all job control threads have been joined
[2025-05-25 14:46:26] 2025-05-25 18:46:09,496 | INFO     | PID=4192593 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 14:46:26] 2025-05-25 18:46:09,497 | INFO     | .. there are 51 such processes running
[2025-05-25 14:46:26] 2025-05-25 18:46:09,497 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 14:46:26] 2025-05-25 18:46:09,497 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 14:46:26] 2025-05-25 18:46:09,497 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 14:46:26] 2025-05-25 18:46:09,615 | INFO     | [payload] failed_post thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:09,702 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:09,874 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 14:46:26] 2025-05-25 18:46:09,919 | INFO     | [data] copytool_in thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:09,946 | INFO     | [data] control thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:10,060 | INFO     | [payload] validate_post thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:10,346 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:10,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 14:46:26] 2025-05-25 18:46:10,420 | INFO     | [job] control thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:10,496 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:10,588 | INFO     | [job] validate thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:10,736 | INFO     | [data] copytool_out thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:11,370 | INFO     | [job] queue monitor thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:13,882 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:18,897 | INFO     | job.realtimelogging is not enabled
[2025-05-25 14:46:26] 2025-05-25 18:46:19,902 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 14:46:26] 2025-05-25 18:46:20,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139795411257152)>', '<ExcThread(monitor, started 139794927572736)>']
[2025-05-25 14:46:26] 2025-05-25 18:46:20,563 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 14:46:26] 2025-05-25 18:46:20,563 | INFO     | [monitor] control thread has ended
[2025-05-25 14:46:26] 2025-05-25 18:46:25,223 | INFO     | all workflow threads have been joined
[2025-05-25 14:46:26] 2025-05-25 18:46:25,223 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 14:46:26] 2025-05-25 18:46:25,224 | INFO     | traces error code: 0
[2025-05-25 14:46:26] 2025-05-25 18:46:25,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 14:46:26] 2025-05-25 18:46:25,531 [wrapper] ==== pilot stdout END ====
[2025-05-25 14:46:26] 2025-05-25 18:46:25,569 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 14:46:26] 2025-05-25 18:46:25,572 [wrapper] pilotpid: 4192593
[2025-05-25 14:46:26] 2025-05-25 18:46:25,575 [wrapper] Pilot exit status: 0
[2025-05-25 14:46:26] 2025-05-25 18:46:25,718 [wrapper] pandaids: 6665715923
[2025-05-25 14:46:26] 2025-05-25 18:46:26,106 [wrapper] cleanup supervisor_pilot 1163294 4192594
[2025-05-25 14:46:26] 2025-05-25 18:46:26,120 [wrapper] Test setup, not cleaning
[2025-05-25 14:46:26] 2025-05-25 18:46:26,143 [wrapper] apfmon messages muted
[2025-05-25 14:46:26] 2025-05-25 18:46:26,156 [wrapper] ==== wrapper stdout END ====
[2025-05-25 14:46:26] 2025-05-25 18:46:26,178 [wrapper] ==== wrapper stderr END ====
[2025-05-25 14:46:26]  *** Error codes and diagnostics ***
[2025-05-25 14:46:26]     "exeErrorCode": 0,
[2025-05-25 14:46:26]     "exeErrorDiag": "",
[2025-05-25 14:46:26]     "pilotErrorCode": 0,
[2025-05-25 14:46:26]     "pilotErrorDiag": "",
[2025-05-25 14:46:26]  *** Listing of results directory ***
[2025-05-25 14:46:26] total 415796
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas    495897 May 24 23:23 pilot3.tar.gz
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas      5111 May 24 23:41 queuedata.json
[2025-05-25 14:46:26] -rwx------. 1 boincer umatlas     37140 May 24 23:41 runpilot2-wrapper.sh
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas       100 May 25 12:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 14:46:26] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 12:15 run_atlas
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas       105 May 25 12:15 job.xml
[2025-05-25 14:46:26] -rw-r--r--. 2 boincer umatlas 222185717 May 25 12:15 EVNT.44871834._001142.pool.root.1
[2025-05-25 14:46:26] -rw-r--r--. 2 boincer umatlas     15093 May 25 12:15 start_atlas.sh
[2025-05-25 14:46:26] drwxrwx--x. 2 boincer umatlas      4096 May 25 12:15 shared
[2025-05-25 14:46:26] -rw-r--r--. 2 boincer umatlas    508881 May 25 12:15 input.tar.gz
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas         0 May 25 12:15 boinc_lockfile
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas      2559 May 25 12:16 pandaJob.out
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas    990811 May 25 12:16 agis_schedconf.cvmfs.json
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas   1596740 May 25 12:17 agis_ddmendpoints.agis.ALL.json
[2025-05-25 14:46:26] drwx------. 4 boincer umatlas      4096 May 25 12:17 pilot3
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas 197461192 May 25 14:44 HITS.44871837._028662.pool.root.1
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas       530 May 25 14:44 boinc_task_state.xml
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas        95 May 25 14:45 pilot_heartbeat.json
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas      1035 May 25 14:45 memory_monitor_summary.json
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas    352807 May 25 14:45 log.44871837._028662.job.log.tgz.1
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas      6934 May 25 14:45 init_data.xml
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas      7695 May 25 14:46 heartbeat.json
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas        27 May 25 14:46 wrapper_checkpoint.txt
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas      8192 May 25 14:46 boinc_mmap_file
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas      4820 May 25 14:46 pilotlog.txt
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas    790673 May 25 14:46 log.44871837._028662.job.log.1
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas       357 May 25 14:46 output.list
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas       620 May 25 14:46 runtime_log
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas   1167360 May 25 14:46 result.tar.gz
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas      8654 May 25 14:46 runtime_log.err
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas       652 May 25 14:46 JyNMDmyPHd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmznNKDmCxxrxn.diag
[2025-05-25 14:46:26] -rw-r--r--. 1 boincer umatlas     20946 May 25 14:46 stderr.txt
[2025-05-25 14:46:26] HITS file was successfully produced:
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas 197461192 May 25 14:44 shared/HITS.pool.root.1
[2025-05-25 14:46:26]  *** Contents of shared directory: ***
[2025-05-25 14:46:26] total 411480
[2025-05-25 14:46:26] -rw-r--r--. 2 boincer umatlas 222185717 May 25 12:15 ATLAS.root_0
[2025-05-25 14:46:26] -rw-r--r--. 2 boincer umatlas     15093 May 25 12:15 start_atlas.sh
[2025-05-25 14:46:26] -rw-r--r--. 2 boincer umatlas    508881 May 25 12:15 input.tar.gz
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas 197461192 May 25 14:44 HITS.pool.root.1
[2025-05-25 14:46:26] -rw-------. 1 boincer umatlas   1167360 May 25 14:46 result.tar.gz
14:46:28 (4180248): run_atlas exited; CPU time 38588.088187
14:46:28 (4180248): called boinc_finish(0)

</stderr_txt>
]]>

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