Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:06:44 (2809877): wrapper (7.7.26015): starting
12:06:44 (2809877): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 12:06:44] Arguments: --nthreads 8
[2025-05-25 12:06:44] Threads: 8
[2025-05-25 12:06:44] Checking for CVMFS
[2025-05-25 12:06:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 12:06:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 12:06:44] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 12:06:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 12:06:45] 2.12.6.0 1594372 9332 369048 146407 3 868 23363118 32935937 35332 16776704 0 61069061 99.504 75623850 23051 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 12:06:45] CVMFS is ok
[2025-05-25 12:06:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 12:06:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 12:06:45] Further information can be found at the LHC@home message board.
[2025-05-25 12:06:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 12:06:45] Checking for apptainer binary...
[2025-05-25 12:06:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 12:06:45] Running /usr/bin/apptainer --version
[2025-05-25 12:06:45] apptainer version 1.4.1-1.el9
[2025-05-25 12:06:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 12:06:46] c7-4-31.aglt2.org
[2025-05-25 12:06:46] apptainer works
[2025-05-25 12:06:46] Set ATHENA_PROC_NUMBER=8
[2025-05-25 12:06:46] Set ATHENA_CORE_NUMBER=8
[2025-05-25 12:06:46] Starting ATLAS job with PandaID=6665725129
[2025-05-25 12:06:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 16:36:36]  *** The last 200 lines of the pilot log: ***
[2025-05-25 16:36:36] 2025-05-25 20:36:09,474 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 16:36:36] 2025-05-25 20:36:09,474 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 16:36:36] 2025-05-25 20:36:09,474 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 16:36:36] 2025-05-25 20:36:09,475 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 16:36:36] 2025-05-25 20:36:09,478 | INFO     | fitting pss+swap vs Time
[2025-05-25 16:36:36] 2025-05-25 20:36:09,478 | INFO     | sum of square deviations: 5705736300.590871
[2025-05-25 16:36:36] 2025-05-25 20:36:09,480 | INFO     | sum of deviations: 50614649494.02273
[2025-05-25 16:36:36] 2025-05-25 20:36:09,480 | INFO     | mean x: 1748197301.6136363
[2025-05-25 16:36:36] 2025-05-25 20:36:09,480 | INFO     | mean y: 2081920.7159090908
[2025-05-25 16:36:36] 2025-05-25 20:36:09,480 | INFO     | -- intersect: -15505889181.700323
[2025-05-25 16:36:36] 2025-05-25 20:36:09,480 | INFO     | intersect: -15505889181.700323
[2025-05-25 16:36:36] 2025-05-25 20:36:09,481 | INFO     | chi2: 2.695276475108349
[2025-05-25 16:36:36] 2025-05-25 20:36:09,481 | INFO     | sum of square deviations: 5387626298.185344
[2025-05-25 16:36:36] 2025-05-25 20:36:09,482 | INFO     | sum of deviations: 65509585626.59063
[2025-05-25 16:36:36] 2025-05-25 20:36:09,482 | INFO     | mean x: 1748197149.104247
[2025-05-25 16:36:36] 2025-05-25 20:36:09,482 | INFO     | mean y: 2088951.6447876447
[2025-05-25 16:36:36] 2025-05-25 20:36:09,483 | INFO     | -- intersect: -21254706618.97229
[2025-05-25 16:36:36] 2025-05-25 20:36:09,483 | INFO     | intersect: -21254706618.97229
[2025-05-25 16:36:36] 2025-05-25 20:36:09,483 | INFO     | chi2: 2.016968987547033
[2025-05-25 16:36:36] 2025-05-25 20:36:09,483 | INFO     | current chi2=2.016968987547033 (change=25.166527212539425 %)
[2025-05-25 16:36:36] 2025-05-25 20:36:09,483 | INFO     | sum of square deviations: 5081563277.232256
[2025-05-25 16:36:36] 2025-05-25 20:36:09,484 | INFO     | sum of deviations: 62203440999.40557
[2025-05-25 16:36:36] 2025-05-25 20:36:09,485 | INFO     | mean x: 1748196996.5944881
[2025-05-25 16:36:36] 2025-05-25 20:36:09,485 | INFO     | mean y: 2087308.0039370079
[2025-05-25 16:36:36] 2025-05-25 20:36:09,485 | INFO     | -- intersect: -21397600701.43715
[2025-05-25 16:36:36] 2025-05-25 20:36:09,485 | INFO     | intersect: -21397600701.43715
[2025-05-25 16:36:36] 2025-05-25 20:36:09,485 | INFO     | chi2: 2.0165852953131984
[2025-05-25 16:36:36] 2025-05-25 20:36:09,485 | INFO     | current chi2=2.0165852953131984 (change=0.019023209390102293 %)
[2025-05-25 16:36:36] 2025-05-25 20:36:09,485 | INFO     | right removable region: 253
[2025-05-25 16:36:36] 2025-05-25 20:36:09,485 | INFO     | sum of square deviations: 5387656070.525116
[2025-05-25 16:36:36] 2025-05-25 20:36:09,487 | INFO     | sum of deviations: 6457954429.81468
[2025-05-25 16:36:36] 2025-05-25 20:36:09,487 | INFO     | mean x: 1748197454.1158302
[2025-05-25 16:36:36] 2025-05-25 20:36:09,487 | INFO     | mean y: 2102964.606177606
[2025-05-25 16:36:36] 2025-05-25 20:36:09,487 | INFO     | -- intersect: -2093387049.0868638
[2025-05-25 16:36:36] 2025-05-25 20:36:09,487 | INFO     | intersect: -2093387049.0868638
[2025-05-25 16:36:36] 2025-05-25 20:36:09,488 | INFO     | chi2: 0.8352857916993064
[2025-05-25 16:36:36] 2025-05-25 20:36:09,488 | INFO     | current chi2=0.8352857916993064 (change=69.00927235430538 %)
[2025-05-25 16:36:36] 2025-05-25 20:36:09,488 | INFO     | sum of square deviations: 5081622577.956668
[2025-05-25 16:36:36] 2025-05-25 20:36:09,490 | INFO     | sum of deviations: 936886983.5157452
[2025-05-25 16:36:36] 2025-05-25 20:36:09,490 | INFO     | mean x: 1748197606.6181102
[2025-05-25 16:36:36] 2025-05-25 20:36:09,490 | INFO     | mean y: 2105707.3661417323
[2025-05-25 16:36:36] 2025-05-25 20:36:09,490 | INFO     | -- intersect: -320205435.802715
[2025-05-25 16:36:36] 2025-05-25 20:36:09,490 | INFO     | intersect: -320205435.802715
[2025-05-25 16:36:36] 2025-05-25 20:36:09,491 | INFO     | chi2: 0.8116467638399089
[2025-05-25 16:36:36] 2025-05-25 20:36:09,491 | INFO     | current chi2=0.8116467638399089 (change=2.8300526711110776 %)
[2025-05-25 16:36:36] 2025-05-25 20:36:09,491 | INFO     | left removable region: 20
[2025-05-25 16:36:36] 2025-05-25 20:36:09,491 | INFO     | sum of square deviations: 3922535125.5279045
[2025-05-25 16:36:36] 2025-05-25 20:36:09,493 | INFO     | sum of deviations: 7334963904.969955
[2025-05-25 16:36:36] 2025-05-25 20:36:09,493 | INFO     | mean x: 1748197576.1030042
[2025-05-25 16:36:36] 2025-05-25 20:36:09,493 | INFO     | mean y: 2115743.042918455
[2025-05-25 16:36:36] 2025-05-25 20:36:09,493 | INFO     | -- intersect: -3266934936.9674373
[2025-05-25 16:36:36] 2025-05-25 20:36:09,493 | INFO     | intersect: -3266934936.9674373
[2025-05-25 16:36:36] 2025-05-25 20:36:09,493 | INFO     | chi2: 0.09897939796217604
[2025-05-25 16:36:36] 2025-05-25 20:36:09,493 | INFO     | -- intersect: -3266934936.9674373
[2025-05-25 16:36:36] 2025-05-25 20:36:09,493 | INFO     | current memory leak: 1.87 B/s (using 233 data points, chi2=0.10)
[2025-05-25 16:36:36] 2025-05-25 20:36:09,494 | INFO     | ..............................
[2025-05-25 16:36:36] 2025-05-25 20:36:09,494 | INFO     | . Timing measurements:
[2025-05-25 16:36:36] 2025-05-25 20:36:09,494 | INFO     | . get job = 0 s
[2025-05-25 16:36:36] 2025-05-25 20:36:09,494 | INFO     | . initial setup = 3 s
[2025-05-25 16:36:36] 2025-05-25 20:36:09,494 | INFO     | . payload setup = 17 s
[2025-05-25 16:36:36] 2025-05-25 20:36:09,495 | INFO     | . stage-in = 0 s
[2025-05-25 16:36:36] 2025-05-25 20:36:09,495 | INFO     | . payload execution = 16056 s
[2025-05-25 16:36:36] 2025-05-25 20:36:09,495 | INFO     | . stage-out = 3 s
[2025-05-25 16:36:36] 2025-05-25 20:36:09,495 | INFO     | . log creation = 0 s
[2025-05-25 16:36:36] 2025-05-25 20:36:09,495 | INFO     | ..............................
[2025-05-25 16:36:36] 2025-05-25 20:36:10,226 | INFO     | 
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | job summary report
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | --------------------------------------------------
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | PanDA job id: 6665725129
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | task id: 44871837
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | errors: (none)
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | pilot state: finished 
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | transexitcode: 0
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | exeerrorcode: 0
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | exeerrordiag: 
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | exitcode: 0
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | exitmsg: OK
[2025-05-25 16:36:36] 2025-05-25 20:36:10,227 | INFO     | cpuconsumptiontime: 38685 s
[2025-05-25 16:36:36] 2025-05-25 20:36:10,228 | INFO     | nevents: 400
[2025-05-25 16:36:36] 2025-05-25 20:36:10,228 | INFO     | neventsw: 0
[2025-05-25 16:36:36] 2025-05-25 20:36:10,228 | INFO     | pid: 2841438
[2025-05-25 16:36:36] 2025-05-25 20:36:10,228 | INFO     | pgrp: 2841438
[2025-05-25 16:36:36] 2025-05-25 20:36:10,228 | INFO     | corecount: 8
[2025-05-25 16:36:36] 2025-05-25 20:36:10,228 | INFO     | event service: False
[2025-05-25 16:36:36] 2025-05-25 20:36:10,228 | INFO     | sizes: {0: 2393519, 1: 2393718, 10: 2393924, 11: 2393952, 16077: 2424918, 16081: 2433859, 16084: 2434043, 16117: 2434213}
[2025-05-25 16:36:36] 2025-05-25 20:36:10,228 | INFO     | --------------------------------------------------
[2025-05-25 16:36:36] 2025-05-25 20:36:10,228 | INFO     | 
[2025-05-25 16:36:36] 2025-05-25 20:36:10,228 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-25 16:36:36] 2025-05-25 20:36:10,486 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,486 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,486 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,486 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,486 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,486 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,486 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,487 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 16:36:36] 2025-05-25 20:36:10,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,487 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 16:36:36] 2025-05-25 20:36:10,487 | INFO     | job 6665725129 has completed (purged errors)
[2025-05-25 16:36:36] 2025-05-25 20:36:10,487 | INFO     | overall cleanup function is called
[2025-05-25 16:36:36] 2025-05-25 20:36:11,518 | INFO     | --- collectZombieJob: --- 10, [2841438]
[2025-05-25 16:36:36] 2025-05-25 20:36:11,519 | INFO     | zombie collector waiting for pid 2841438
[2025-05-25 16:36:36] 2025-05-25 20:36:11,519 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 16:36:36] 2025-05-25 20:36:11,519 | INFO     | collected zombie processes
[2025-05-25 16:36:36] 2025-05-25 20:36:11,519 | INFO     | will attempt to kill all subprocesses of pid=2841438
[2025-05-25 16:36:36] 2025-05-25 20:36:14,656 | INFO     | PID=2819785 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 16:36:36] 2025-05-25 20:36:14,657 | INFO     | .. there are 34 such processes running
[2025-05-25 16:36:36] 2025-05-25 20:36:14,783 | INFO     | process IDs to be killed: [2841438] (in reverse order)
[2025-05-25 16:36:36] 2025-05-25 20:36:15,310 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 16:36:36] 2025-05-25 20:36:15,314 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 16:36:36] 2025-05-25 20:36:15,496 | INFO     | did not find any defunct processes belonging to 2841438
[2025-05-25 16:36:36] 2025-05-25 20:36:15,638 | INFO     | did not find any defunct processes belonging to 2841438
[2025-05-25 16:36:36] 2025-05-25 20:36:15,639 | INFO     | ready for new job
[2025-05-25 16:36:36] 2025-05-25 20:36:15,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 16:36:36] 2025-05-25 20:36:15,641 | INFO     | **************************************
[2025-05-25 16:36:36] 2025-05-25 20:36:15,641 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 16:36:36] 2025-05-25 20:36:15,641 | INFO     | **************************************
[2025-05-25 16:36:36] 2025-05-25 20:36:15,641 | INFO     | 
[2025-05-25 16:36:36] 2025-05-25 20:36:15,700 | INFO     | architecture information:
[2025-05-25 16:36:36] 2025-05-25 20:36:15,714 | INFO     | executing command: cat /etc/os-release
[2025-05-25 16:36:36] 2025-05-25 20:36:15,766 | INFO     | cat /etc/os-release:
[2025-05-25 16:36:36] NAME="CentOS Linux"
[2025-05-25 16:36:36] VERSION="7 (Core)"
[2025-05-25 16:36:36] ID="centos"
[2025-05-25 16:36:36] ID_LIKE="rhel fedora"
[2025-05-25 16:36:36] VERSION_ID="7"
[2025-05-25 16:36:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 16:36:36] ANSI_COLOR="0;31"
[2025-05-25 16:36:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 16:36:36] HOME_URL="https://www.centos.org/"
[2025-05-25 16:36:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 16:36:36] 
[2025-05-25 16:36:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 16:36:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 16:36:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 16:36:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 16:36:36] 
[2025-05-25 16:36:36] 2025-05-25 20:36:15,767 | INFO     | **************************************
[2025-05-25 16:36:36] 2025-05-25 20:36:16,272 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-25 16:36:36] 2025-05-25 20:36:16,350 | INFO     | sufficient remaining disk space (73794584576 B)
[2025-05-25 16:36:36] 2025-05-25 20:36:16,351 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 16:36:36] 2025-05-25 20:36:16,351 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 16:36:36] 2025-05-25 20:36:16,351 | INFO     | update_server=False
[2025-05-25 16:36:36] 2025-05-25 20:36:16,351 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 16:36:36] 2025-05-25 20:36:16,657 | INFO     | all job control threads have been joined
[2025-05-25 16:36:36] 2025-05-25 20:36:16,663 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 16:36:36] 2025-05-25 20:36:16,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 16:36:36] 2025-05-25 20:36:16,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 16:36:36] 2025-05-25 20:36:16,696 | INFO     | all data control threads have been joined
[2025-05-25 16:36:36] 2025-05-25 20:36:17,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 16:36:36] 2025-05-25 20:36:17,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:36:36] 2025-05-25 20:36:17,253 | INFO     | aborting loop
[2025-05-25 16:36:36] 2025-05-25 20:36:17,350 | INFO     | all payload control threads have been joined
[2025-05-25 16:36:36] 2025-05-25 20:36:17,357 | INFO     | [job] retrieve thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:17,368 | INFO     | [job] validate thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:17,548 | INFO     | [payload] failed_post thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:17,663 | INFO     | [job] control thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:17,702 | INFO     | [data] control thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:18,238 | INFO     | [payload] validate_post thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:18,253 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:18,258 | INFO     | [job] job monitor thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:18,321 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:18,356 | INFO     | [payload] control thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:18,486 | INFO     | [data] copytool_in thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:18,521 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:18,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:36:36] 2025-05-25 20:36:18,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 16:36:36] 2025-05-25 20:36:19,143 | INFO     | [data] copytool_out thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:19,846 | INFO     | [job] queue monitor thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:22,941 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:26,999 | INFO     | job.realtimelogging is not enabled
[2025-05-25 16:36:36] 2025-05-25 20:36:28,005 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 16:36:36] 2025-05-25 20:36:29,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698849081152)>', '<ExcThread(monitor, started 140698212882176)>']
[2025-05-25 16:36:36] 2025-05-25 20:36:29,747 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 16:36:36] 2025-05-25 20:36:29,748 | INFO     | [monitor] control thread has ended
[2025-05-25 16:36:36] 2025-05-25 20:36:34,262 | INFO     | all workflow threads have been joined
[2025-05-25 16:36:36] 2025-05-25 20:36:34,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 16:36:36] 2025-05-25 20:36:34,263 | INFO     | traces error code: 0
[2025-05-25 16:36:36] 2025-05-25 20:36:34,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 16:36:36] 2025-05-25 20:36:34,821 [wrapper] ==== pilot stdout END ====
[2025-05-25 16:36:36] 2025-05-25 20:36:34,843 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 16:36:36] 2025-05-25 20:36:34,866 [wrapper] pilotpid: 2819785
[2025-05-25 16:36:36] 2025-05-25 20:36:34,887 [wrapper] Pilot exit status: 0
[2025-05-25 16:36:36] 2025-05-25 20:36:35,005 [wrapper] pandaids: 6665725129
[2025-05-25 16:36:36] 2025-05-25 20:36:35,537 [wrapper] cleanup supervisor_pilot 1771223 2819786
[2025-05-25 16:36:36] 2025-05-25 20:36:35,550 [wrapper] Test setup, not cleaning
[2025-05-25 16:36:36] 2025-05-25 20:36:35,565 [wrapper] apfmon messages muted
[2025-05-25 16:36:36] 2025-05-25 20:36:35,568 [wrapper] ==== wrapper stdout END ====
[2025-05-25 16:36:36] 2025-05-25 20:36:35,570 [wrapper] ==== wrapper stderr END ====
[2025-05-25 16:36:36]  *** Error codes and diagnostics ***
[2025-05-25 16:36:36]     "exeErrorCode": 0,
[2025-05-25 16:36:36]     "exeErrorDiag": "",
[2025-05-25 16:36:36]     "pilotErrorCode": 0,
[2025-05-25 16:36:36]     "pilotErrorDiag": "",
[2025-05-25 16:36:36]  *** Listing of results directory ***
[2025-05-25 16:36:36] total 418280
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas    495897 May 25 06:33 pilot3.tar.gz
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas      5111 May 25 06:41 queuedata.json
[2025-05-25 16:36:36] -rwx------. 1 boincer umatlas     37140 May 25 06:42 runpilot2-wrapper.sh
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas       100 May 25 12:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 16:36:36] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 12:06 run_atlas
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas       105 May 25 12:06 job.xml
[2025-05-25 16:36:36] -rw-r--r--. 2 boincer umatlas 228255794 May 25 12:06 EVNT.44871834._001326.pool.root.1
[2025-05-25 16:36:36] -rw-r--r--. 2 boincer umatlas    508878 May 25 12:06 input.tar.gz
[2025-05-25 16:36:36] -rw-r--r--. 2 boincer umatlas     15093 May 25 12:06 start_atlas.sh
[2025-05-25 16:36:36] drwxrwx--x. 2 boincer umatlas      4096 May 25 12:06 shared
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas         0 May 25 12:06 boinc_lockfile
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas      2558 May 25 12:06 pandaJob.out
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas    990811 May 25 12:07 agis_schedconf.cvmfs.json
[2025-05-25 16:36:36] drwx------. 4 boincer umatlas      4096 May 25 12:07 pilot3
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas      6934 May 25 16:29 init_data.xml
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas 192973628 May 25 16:34 HITS.44871837._033260.pool.root.1
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas       531 May 25 16:34 boinc_task_state.xml
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas        95 May 25 16:35 pilot_heartbeat.json
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas      1065 May 25 16:35 memory_monitor_summary.json
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas   1596740 May 25 16:35 agis_ddmendpoints.agis.ALL.json
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas    406220 May 25 16:35 log.44871837._033260.job.log.tgz.1
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas      7717 May 25 16:36 heartbeat.json
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas      8192 May 25 16:36 boinc_mmap_file
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas        28 May 25 16:36 wrapper_checkpoint.txt
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas      4425 May 25 16:36 pilotlog.txt
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas   1222430 May 25 16:36 log.44871837._033260.job.log.1
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas       357 May 25 16:36 output.list
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas       620 May 25 16:36 runtime_log
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas   1648640 May 25 16:36 result.tar.gz
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas      8655 May 25 16:36 runtime_log.err
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas       660 May 25 16:36 gQ2NDm3yNd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwNOKDmhjxrfm.diag
[2025-05-25 16:36:36] -rw-r--r--. 1 boincer umatlas     20962 May 25 16:36 stderr.txt
[2025-05-25 16:36:36] HITS file was successfully produced:
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas 192973628 May 25 16:34 shared/HITS.pool.root.1
[2025-05-25 16:36:36]  *** Contents of shared directory: ***
[2025-05-25 16:36:36] total 413492
[2025-05-25 16:36:36] -rw-r--r--. 2 boincer umatlas 228255794 May 25 12:06 ATLAS.root_0
[2025-05-25 16:36:36] -rw-r--r--. 2 boincer umatlas    508878 May 25 12:06 input.tar.gz
[2025-05-25 16:36:36] -rw-r--r--. 2 boincer umatlas     15093 May 25 12:06 start_atlas.sh
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas 192973628 May 25 16:34 HITS.pool.root.1
[2025-05-25 16:36:36] -rw-------. 1 boincer umatlas   1648640 May 25 16:36 result.tar.gz
16:36:38 (2809877): run_atlas exited; CPU time 39264.397042
16:36:38 (2809877): called boinc_finish(0)

</stderr_txt>
]]>

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