Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:07:47 (1883239): wrapper (7.7.26015): starting
12:07:47 (1883239): wrapper: running run_atlas (--nthreads 9)
[2025-05-25 12:07:47] Arguments: --nthreads 9
[2025-05-25 12:07:47] Threads: 9
[2025-05-25 12:07:47] Checking for CVMFS
[2025-05-25 12:07:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 12:07:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 12:07:48] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 12:07:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 12:07:49] 2.12.6.0 3369999 9091 279928 146407 2 582 23870404 32935936 21839 16776704 0 29779747 99.499 38414966 37989 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 12:07:49] CVMFS is ok
[2025-05-25 12:07:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 12:07:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 12:07:49] Further information can be found at the LHC@home message board.
[2025-05-25 12:07:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 12:07:49] Checking for apptainer binary...
[2025-05-25 12:07:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 12:07:49] Running /usr/bin/apptainer --version
[2025-05-25 12:07:49] apptainer version 1.4.1-1.el9
[2025-05-25 12:07:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 12:07:49] c6-2-29-1.aglt2.org
[2025-05-25 12:07:49] apptainer works
[2025-05-25 12:07:49] Set ATHENA_PROC_NUMBER=9
[2025-05-25 12:07:49] Set ATHENA_CORE_NUMBER=9
[2025-05-25 12:07:49] Starting ATLAS job with PandaID=6665723905
[2025-05-25 12:07:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 16:34:38]  *** The last 200 lines of the pilot log: ***
[2025-05-25 16:34:38] 2025-05-25 20:34:17,852 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 16:34:38] 2025-05-25 20:34:17,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 16:34:38] 2025-05-25 20:34:17,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 16:34:38] 2025-05-25 20:34:17,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 16:34:38] 2025-05-25 20:34:17,971 | INFO     | fitting pss+swap vs Time
[2025-05-25 16:34:38] 2025-05-25 20:34:17,972 | INFO     | sum of square deviations: 5512799823.318043
[2025-05-25 16:34:38] 2025-05-25 20:34:17,973 | INFO     | sum of deviations: 18286653476.858215
[2025-05-25 16:34:38] 2025-05-25 20:34:17,973 | INFO     | mean x: 1748197269.3256705
[2025-05-25 16:34:38] 2025-05-25 20:34:17,973 | INFO     | mean y: 2150484.0957854404
[2025-05-25 16:34:38] 2025-05-25 20:34:17,973 | INFO     | -- intersect: -5796840717.820741
[2025-05-25 16:34:38] 2025-05-25 20:34:17,974 | INFO     | intersect: -5796840717.820741
[2025-05-25 16:34:38] 2025-05-25 20:34:18,083 | INFO     | chi2: 3.3447507679743698
[2025-05-25 16:34:38] 2025-05-25 20:34:18,084 | INFO     | sum of square deviations: 5201994940.4375
[2025-05-25 16:34:38] 2025-05-25 20:34:18,086 | INFO     | sum of deviations: 48578470923.5
[2025-05-25 16:34:38] 2025-05-25 20:34:18,086 | INFO     | mean x: 1748197116.828125
[2025-05-25 16:34:38] 2025-05-25 20:34:18,086 | INFO     | mean y: 2165183.125
[2025-05-25 16:34:38] 2025-05-25 20:34:18,086 | INFO     | -- intersect: -16323253003.698387
[2025-05-25 16:34:38] 2025-05-25 20:34:18,086 | INFO     | intersect: -16323253003.698387
[2025-05-25 16:34:38] 2025-05-25 20:34:18,087 | INFO     | chi2: 1.8399146760883252
[2025-05-25 16:34:38] 2025-05-25 20:34:18,209 | INFO     | current chi2=1.8399146760883252 (change=44.99097829036139 %)
[2025-05-25 16:34:38] 2025-05-25 20:34:18,210 | INFO     | sum of square deviations: 4903112629.888435
[2025-05-25 16:34:38] 2025-05-25 20:34:18,211 | INFO     | sum of deviations: 48239930835.13946
[2025-05-25 16:34:38] 2025-05-25 20:34:18,211 | INFO     | mean x: 1748196964.3346612
[2025-05-25 16:34:38] 2025-05-25 20:34:18,211 | INFO     | mean y: 2165005.581673307
[2025-05-25 16:34:38] 2025-05-25 20:34:18,211 | INFO     | -- intersect: -17197705160.897396
[2025-05-25 16:34:38] 2025-05-25 20:34:18,211 | INFO     | intersect: -17197705160.897396
[2025-05-25 16:34:38] 2025-05-25 20:34:18,212 | INFO     | chi2: 1.8371896640095007
[2025-05-25 16:34:38] 2025-05-25 20:34:18,212 | INFO     | current chi2=1.8371896640095007 (change=0.14810535044037332 %)
[2025-05-25 16:34:38] 2025-05-25 20:34:18,212 | INFO     | right removable region: 250
[2025-05-25 16:34:38] 2025-05-25 20:34:18,212 | INFO     | sum of square deviations: 5201958767.777344
[2025-05-25 16:34:38] 2025-05-25 20:34:18,347 | INFO     | sum of deviations: -24586556636.777344
[2025-05-25 16:34:38] 2025-05-25 20:34:18,347 | INFO     | mean x: 1748197421.8320312
[2025-05-25 16:34:38] 2025-05-25 20:34:18,347 | INFO     | mean y: 2171398.16796875
[2025-05-25 16:34:38] 2025-05-25 20:34:18,347 | INFO     | -- intersect: 8264857982.765117
[2025-05-25 16:34:38] 2025-05-25 20:34:18,348 | INFO     | intersect: 8264857982.765117
[2025-05-25 16:34:38] 2025-05-25 20:34:18,348 | INFO     | chi2: 1.6776750800315017
[2025-05-25 16:34:38] 2025-05-25 20:34:18,348 | INFO     | current chi2=1.6776750800315017 (change=49.84155184012331 %)
[2025-05-25 16:34:38] 2025-05-25 20:34:18,348 | INFO     | sum of square deviations: 4903040405.888434
[2025-05-25 16:34:38] 2025-05-25 20:34:18,389 | INFO     | sum of deviations: -31316675481.34263
[2025-05-25 16:34:38] 2025-05-25 20:34:18,389 | INFO     | mean x: 1748197574.3346612
[2025-05-25 16:34:38] 2025-05-25 20:34:18,389 | INFO     | mean y: 2174799.027888446
[2025-05-25 16:34:38] 2025-05-25 20:34:18,389 | INFO     | -- intersect: 11168253717.52063
[2025-05-25 16:34:38] 2025-05-25 20:34:18,389 | INFO     | intersect: 11168253717.52063
[2025-05-25 16:34:38] 2025-05-25 20:34:18,390 | INFO     | chi2: 1.6098900762978778
[2025-05-25 16:34:38] 2025-05-25 20:34:18,390 | INFO     | current chi2=1.6098900762978778 (change=4.040413101466051 %)
[2025-05-25 16:34:38] 2025-05-25 20:34:18,390 | INFO     | left removable region: 20
[2025-05-25 16:34:38] 2025-05-25 20:34:18,390 | INFO     | sum of square deviations: 3772425318.9738955
[2025-05-25 16:34:38] 2025-05-25 20:34:18,391 | INFO     | sum of deviations: -2926001346.965215
[2025-05-25 16:34:38] 2025-05-25 20:34:18,392 | INFO     | mean x: 1748197543.8521738
[2025-05-25 16:34:38] 2025-05-25 20:34:18,392 | INFO     | mean y: 2192272.0304347826
[2025-05-25 16:34:38] 2025-05-25 20:34:18,392 | INFO     | -- intersect: 1358144460.757683
[2025-05-25 16:34:38] 2025-05-25 20:34:18,392 | INFO     | intersect: 1358144460.757683
[2025-05-25 16:34:38] 2025-05-25 20:34:18,392 | INFO     | chi2: 0.06531108207479064
[2025-05-25 16:34:38] 2025-05-25 20:34:18,392 | INFO     | -- intersect: 1358144460.757683
[2025-05-25 16:34:38] 2025-05-25 20:34:18,392 | INFO     | current memory leak: -0.78 B/s (using 230 data points, chi2=0.07)
[2025-05-25 16:34:38] 2025-05-25 20:34:18,505 | INFO     | ..............................
[2025-05-25 16:34:38] 2025-05-25 20:34:18,506 | INFO     | . Timing measurements:
[2025-05-25 16:34:38] 2025-05-25 20:34:18,506 | INFO     | . get job = 0 s
[2025-05-25 16:34:38] 2025-05-25 20:34:18,506 | INFO     | . initial setup = 3 s
[2025-05-25 16:34:38] 2025-05-25 20:34:18,506 | INFO     | . payload setup = 12 s
[2025-05-25 16:34:38] 2025-05-25 20:34:18,506 | INFO     | . stage-in = 0 s
[2025-05-25 16:34:38] 2025-05-25 20:34:18,506 | INFO     | . payload execution = 15876 s
[2025-05-25 16:34:38] 2025-05-25 20:34:18,506 | INFO     | . stage-out = 7 s
[2025-05-25 16:34:38] 2025-05-25 20:34:18,506 | INFO     | . log creation = 0 s
[2025-05-25 16:34:38] 2025-05-25 20:34:18,506 | INFO     | ..............................
[2025-05-25 16:34:38] 2025-05-25 20:34:19,291 | INFO     | 
[2025-05-25 16:34:38] 2025-05-25 20:34:19,291 | INFO     | job summary report
[2025-05-25 16:34:38] 2025-05-25 20:34:19,291 | INFO     | --------------------------------------------------
[2025-05-25 16:34:38] 2025-05-25 20:34:19,291 | INFO     | PanDA job id: 6665723905
[2025-05-25 16:34:38] 2025-05-25 20:34:19,291 | INFO     | task id: 44871837
[2025-05-25 16:34:38] 2025-05-25 20:34:19,291 | INFO     | errors: (none)
[2025-05-25 16:34:38] 2025-05-25 20:34:19,292 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 16:34:38] 2025-05-25 20:34:19,292 | INFO     | pilot state: finished 
[2025-05-25 16:34:38] 2025-05-25 20:34:19,292 | INFO     | transexitcode: 0
[2025-05-25 16:34:38] 2025-05-25 20:34:19,292 | INFO     | exeerrorcode: 0
[2025-05-25 16:34:38] 2025-05-25 20:34:19,292 | INFO     | exeerrordiag: 
[2025-05-25 16:34:38] 2025-05-25 20:34:19,292 | INFO     | exitcode: 0
[2025-05-25 16:34:38] 2025-05-25 20:34:19,292 | INFO     | exitmsg: OK
[2025-05-25 16:34:38] 2025-05-25 20:34:19,292 | INFO     | cpuconsumptiontime: 50366 s
[2025-05-25 16:34:38] 2025-05-25 20:34:19,292 | INFO     | nevents: 400
[2025-05-25 16:34:38] 2025-05-25 20:34:19,293 | INFO     | neventsw: 0
[2025-05-25 16:34:38] 2025-05-25 20:34:19,293 | INFO     | pid: 1916990
[2025-05-25 16:34:38] 2025-05-25 20:34:19,293 | INFO     | pgrp: 1916990
[2025-05-25 16:34:38] 2025-05-25 20:34:19,293 | INFO     | corecount: 9
[2025-05-25 16:34:38] 2025-05-25 20:34:19,293 | INFO     | event service: False
[2025-05-25 16:34:38] 2025-05-25 20:34:19,293 | INFO     | sizes: {0: 2393514, 1: 2393769, 12: 2394003, 23: 2394003, 15893: 2424989, 15901: 2433930, 15902: 2434114, 15941: 2434284}
[2025-05-25 16:34:38] 2025-05-25 20:34:19,293 | INFO     | --------------------------------------------------
[2025-05-25 16:34:38] 2025-05-25 20:34:19,293 | INFO     | 
[2025-05-25 16:34:38] 2025-05-25 20:34:19,311 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-25 16:34:38] 2025-05-25 20:34:19,440 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,441 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,441 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,441 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,442 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 16:34:38] 2025-05-25 20:34:19,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,442 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 16:34:38] 2025-05-25 20:34:19,442 | INFO     | job 6665723905 has completed (purged errors)
[2025-05-25 16:34:38] 2025-05-25 20:34:19,442 | INFO     | overall cleanup function is called
[2025-05-25 16:34:38] 2025-05-25 20:34:20,478 | INFO     | --- collectZombieJob: --- 10, [1916990]
[2025-05-25 16:34:38] 2025-05-25 20:34:20,478 | INFO     | zombie collector waiting for pid 1916990
[2025-05-25 16:34:38] 2025-05-25 20:34:20,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 16:34:38] 2025-05-25 20:34:20,478 | INFO     | collected zombie processes
[2025-05-25 16:34:38] 2025-05-25 20:34:20,479 | INFO     | will attempt to kill all subprocesses of pid=1916990
[2025-05-25 16:34:38] 2025-05-25 20:34:22,764 | INFO     | process IDs to be killed: [1916990] (in reverse order)
[2025-05-25 16:34:38] 2025-05-25 20:34:22,886 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 16:34:38] 2025-05-25 20:34:22,887 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 16:34:38] 2025-05-25 20:34:22,912 | INFO     | did not find any defunct processes belonging to 1916990
[2025-05-25 16:34:38] 2025-05-25 20:34:22,975 | INFO     | did not find any defunct processes belonging to 1916990
[2025-05-25 16:34:38] 2025-05-25 20:34:22,975 | INFO     | ready for new job
[2025-05-25 16:34:38] 2025-05-25 20:34:22,975 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 16:34:38] 2025-05-25 20:34:22,981 | INFO     | **************************************
[2025-05-25 16:34:38] 2025-05-25 20:34:22,982 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 16:34:38] 2025-05-25 20:34:22,982 | INFO     | **************************************
[2025-05-25 16:34:38] 2025-05-25 20:34:22,982 | INFO     | 
[2025-05-25 16:34:38] 2025-05-25 20:34:22,999 | INFO     | architecture information:
[2025-05-25 16:34:38] 2025-05-25 20:34:23,008 | INFO     | executing command: cat /etc/os-release
[2025-05-25 16:34:38] 2025-05-25 20:34:23,044 | INFO     | cat /etc/os-release:
[2025-05-25 16:34:38] NAME="CentOS Linux"
[2025-05-25 16:34:38] VERSION="7 (Core)"
[2025-05-25 16:34:38] ID="centos"
[2025-05-25 16:34:38] ID_LIKE="rhel fedora"
[2025-05-25 16:34:38] VERSION_ID="7"
[2025-05-25 16:34:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 16:34:38] ANSI_COLOR="0;31"
[2025-05-25 16:34:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 16:34:38] HOME_URL="https://www.centos.org/"
[2025-05-25 16:34:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 16:34:38] 
[2025-05-25 16:34:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 16:34:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 16:34:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 16:34:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 16:34:38] 
[2025-05-25 16:34:38] 2025-05-25 20:34:23,045 | INFO     | **************************************
[2025-05-25 16:34:38] 2025-05-25 20:34:23,550 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-25 16:34:38] 2025-05-25 20:34:23,671 | INFO     | PID=1895359 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 16:34:38] 2025-05-25 20:34:23,675 | INFO     | .. there are 30 such processes running
[2025-05-25 16:34:38] 2025-05-25 20:34:23,697 | INFO     | sufficient remaining disk space (75142004736 B)
[2025-05-25 16:34:38] 2025-05-25 20:34:23,698 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 16:34:38] 2025-05-25 20:34:23,698 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 16:34:38] 2025-05-25 20:34:23,698 | INFO     | update_server=False
[2025-05-25 16:34:38] 2025-05-25 20:34:23,698 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 16:34:38] 2025-05-25 20:34:23,700 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 16:34:38] 2025-05-25 20:34:23,700 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 16:34:38] 2025-05-25 20:34:23,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 16:34:38] 2025-05-25 20:34:23,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 16:34:38] 2025-05-25 20:34:23,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:34:38] 2025-05-25 20:34:23,706 | INFO     | aborting loop
[2025-05-25 16:34:38] 2025-05-25 20:34:23,996 | INFO     | all job control threads have been joined
[2025-05-25 16:34:38] 2025-05-25 20:34:24,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:34:38] 2025-05-25 20:34:24,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 16:34:38] 2025-05-25 20:34:24,515 | INFO     | all data control threads have been joined
[2025-05-25 16:34:38] 2025-05-25 20:34:24,704 | INFO     | [job] retrieve thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:24,724 | INFO     | [payload] validate_post thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:24,726 | INFO     | [job] job monitor thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:24,759 | INFO     | all payload control threads have been joined
[2025-05-25 16:34:38] 2025-05-25 20:34:25,002 | INFO     | [job] control thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:25,020 | INFO     | [job] queue monitor thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:25,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:25,442 | INFO     | [job] validate thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:25,465 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:25,465 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:25,472 | INFO     | [data] copytool_in thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:25,521 | INFO     | [data] control thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:25,765 | INFO     | [payload] control thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:25,893 | INFO     | [payload] failed_post thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:25,945 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:26,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 16:34:38] 2025-05-25 20:34:26,495 | INFO     | [data] copytool_out thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:30,422 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 16:34:38] 2025-05-25 20:34:31,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139654875850560)>', '<ExcThread(monitor, started 139654376433408)>']
[2025-05-25 16:34:38] 2025-05-25 20:34:31,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 16:34:38] 2025-05-25 20:34:31,764 | INFO     | [monitor] control thread has ended
[2025-05-25 16:34:38] 2025-05-25 20:34:36,470 | INFO     | all workflow threads have been joined
[2025-05-25 16:34:38] 2025-05-25 20:34:36,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 16:34:38] 2025-05-25 20:34:36,471 | INFO     | traces error code: 0
[2025-05-25 16:34:38] 2025-05-25 20:34:36,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 16:34:38] 2025-05-25 20:34:37,272 [wrapper] ==== pilot stdout END ====
[2025-05-25 16:34:38] 2025-05-25 20:34:37,296 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 16:34:38] 2025-05-25 20:34:37,320 [wrapper] pilotpid: 1895359
[2025-05-25 16:34:38] 2025-05-25 20:34:37,323 [wrapper] Pilot exit status: 0
[2025-05-25 16:34:38] 2025-05-25 20:34:37,455 [wrapper] pandaids: 6665723905
[2025-05-25 16:34:38] 2025-05-25 20:34:37,756 [wrapper] cleanup supervisor_pilot 3658152 1895360
[2025-05-25 16:34:38] 2025-05-25 20:34:37,767 [wrapper] Test setup, not cleaning
[2025-05-25 16:34:38] 2025-05-25 20:34:37,797 [wrapper] apfmon messages muted
[2025-05-25 16:34:38] 2025-05-25 20:34:37,855 [wrapper] ==== wrapper stdout END ====
[2025-05-25 16:34:38] 2025-05-25 20:34:37,878 [wrapper] ==== wrapper stderr END ====
[2025-05-25 16:34:38]  *** Error codes and diagnostics ***
[2025-05-25 16:34:38]     "exeErrorCode": 0,
[2025-05-25 16:34:38]     "exeErrorDiag": "",
[2025-05-25 16:34:38]     "pilotErrorCode": 0,
[2025-05-25 16:34:38]     "pilotErrorDiag": "",
[2025-05-25 16:34:38]  *** Listing of results directory ***
[2025-05-25 16:34:38] total 415752
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas    495897 May 25 06:18 pilot3.tar.gz
[2025-05-25 16:34:38] -rwx------. 1 boincer umatlas     37140 May 25 06:20 runpilot2-wrapper.sh
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas      5111 May 25 06:20 queuedata.json
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas       100 May 25 12:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 16:34:38] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 12:07 run_atlas
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas       105 May 25 12:07 job.xml
[2025-05-25 16:34:38] -rw-r--r--. 2 boincer umatlas 225492110 May 25 12:07 EVNT.44871834._001311.pool.root.1
[2025-05-25 16:34:38] -rw-r--r--. 2 boincer umatlas     15093 May 25 12:07 start_atlas.sh
[2025-05-25 16:34:38] drwxrwx--x. 2 boincer umatlas      4096 May 25 12:07 shared
[2025-05-25 16:34:38] -rw-r--r--. 2 boincer umatlas    508872 May 25 12:07 input.tar.gz
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas         0 May 25 12:07 boinc_lockfile
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas      2559 May 25 12:07 pandaJob.out
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas    990811 May 25 12:08 agis_schedconf.cvmfs.json
[2025-05-25 16:34:38] drwx------. 4 boincer umatlas      4096 May 25 12:08 pilot3
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas      6841 May 25 16:32 init_data.xml
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas 192928154 May 25 16:32 HITS.44871837._032881.pool.root.1
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas       531 May 25 16:32 boinc_task_state.xml
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas      1045 May 25 16:33 memory_monitor_summary.json
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas        95 May 25 16:33 pilot_heartbeat.json
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas   1596740 May 25 16:33 agis_ddmendpoints.agis.ALL.json
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas    422634 May 25 16:33 log.44871837._032881.job.log.tgz.1
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas      7728 May 25 16:34 heartbeat.json
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas      8192 May 25 16:34 boinc_mmap_file
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas        28 May 25 16:34 wrapper_checkpoint.txt
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas      4871 May 25 16:34 pilotlog.txt
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas   1315510 May 25 16:34 log.44871837._032881.job.log.1
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas       357 May 25 16:34 output.list
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas       620 May 25 16:34 runtime_log
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas   1761280 May 25 16:34 result.tar.gz
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas      8665 May 25 16:34 runtime_log.err
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas       657 May 25 16:34 lBPMDmzdNd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmguTKDmgeFEOm.diag
[2025-05-25 16:34:38] -rw-r--r--. 1 boincer umatlas     20999 May 25 16:34 stderr.txt
[2025-05-25 16:34:38] HITS file was successfully produced:
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas 192928154 May 25 16:32 shared/HITS.pool.root.1
[2025-05-25 16:34:38]  *** Contents of shared directory: ***
[2025-05-25 16:34:38] total 410856
[2025-05-25 16:34:38] -rw-r--r--. 2 boincer umatlas 225492110 May 25 12:07 ATLAS.root_0
[2025-05-25 16:34:38] -rw-r--r--. 2 boincer umatlas     15093 May 25 12:07 start_atlas.sh
[2025-05-25 16:34:38] -rw-r--r--. 2 boincer umatlas    508872 May 25 12:07 input.tar.gz
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas 192928154 May 25 16:32 HITS.pool.root.1
[2025-05-25 16:34:38] -rw-------. 1 boincer umatlas   1761280 May 25 16:34 result.tar.gz
16:35:00 (1883239): run_atlas exited; CPU time 50840.762363
16:35:00 (1883239): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN