Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:57:22 (3421946): wrapper (7.7.26015): starting
11:57:22 (3421946): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 11:57:22] Arguments: --nthreads 8
[2025-05-25 11:57:22] Threads: 8
[2025-05-25 11:57:22] Checking for CVMFS
[2025-05-25 11:57:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 11:57:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 11:57:22] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 11:57:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 11:57:22] 2.12.6.0 7828 23118 488856 146407 3 500 28562993 32935936 25227 16776704 0 195451681 99.657 176209645 21626 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 11:57:22] CVMFS is ok
[2025-05-25 11:57:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 11:57:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 11:57:22] Further information can be found at the LHC@home message board.
[2025-05-25 11:57:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 11:57:22] Checking for apptainer binary...
[2025-05-25 11:57:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 11:57:22] Running /usr/bin/apptainer --version
[2025-05-25 11:57:23] apptainer version 1.4.1-1.el9
[2025-05-25 11:57:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 11:57:23] c7-3-29.aglt2.org
[2025-05-25 11:57:23] apptainer works
[2025-05-25 11:57:23] Set ATHENA_PROC_NUMBER=8
[2025-05-25 11:57:23] Set ATHENA_CORE_NUMBER=8
[2025-05-25 11:57:23] Starting ATLAS job with PandaID=6665729625
[2025-05-25 11:57:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 16:51:09]  *** The last 200 lines of the pilot log: ***
[2025-05-25 16:51:09] 2025-05-25 20:50:53,346 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665729625/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 16:51:09] 2025-05-25 20:50:53,350 | INFO     | extracted standard info from prmon json
[2025-05-25 16:51:09] 2025-05-25 20:50:53,350 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 16:51:09] 2025-05-25 20:50:53,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 16:51:09] 2025-05-25 20:50:53,351 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 16:51:09] 2025-05-25 20:50:53,351 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 16:51:09] 2025-05-25 20:50:53,355 | INFO     | fitting pss+swap vs Time
[2025-05-25 16:51:09] 2025-05-25 20:50:53,355 | INFO     | sum of square deviations: 7407135209.944499
[2025-05-25 16:51:09] 2025-05-25 20:50:53,357 | INFO     | sum of deviations: 41876233313.93056
[2025-05-25 16:51:09] 2025-05-25 20:50:53,357 | INFO     | mean x: 1748197471.5138888
[2025-05-25 16:51:09] 2025-05-25 20:50:53,357 | INFO     | mean y: 2081781.142361111
[2025-05-25 16:51:09] 2025-05-25 20:50:53,357 | INFO     | -- intersect: -9881351303.439825
[2025-05-25 16:51:09] 2025-05-25 20:50:53,357 | INFO     | intersect: -9881351303.439825
[2025-05-25 16:51:09] 2025-05-25 20:50:53,357 | INFO     | chi2: 3.391569478542848
[2025-05-25 16:51:09] 2025-05-25 20:50:53,358 | INFO     | sum of square deviations: 7028003739.943455
[2025-05-25 16:51:09] 2025-05-25 20:50:53,359 | INFO     | sum of deviations: 65090438764.21547
[2025-05-25 16:51:09] 2025-05-25 20:50:53,359 | INFO     | mean x: 1748197319.0141342
[2025-05-25 16:51:09] 2025-05-25 20:50:53,359 | INFO     | mean y: 2091013.6961130742
[2025-05-25 16:51:09] 2025-05-25 20:50:53,359 | INFO     | -- intersect: -16188983258.835604
[2025-05-25 16:51:09] 2025-05-25 20:50:53,359 | INFO     | intersect: -16188983258.835604
[2025-05-25 16:51:09] 2025-05-25 20:50:53,360 | INFO     | chi2: 2.4779686224783206
[2025-05-25 16:51:09] 2025-05-25 20:50:53,360 | INFO     | current chi2=2.4779686224783206 (change=26.937406467552194 %)
[2025-05-25 16:51:09] 2025-05-25 20:50:53,360 | INFO     | sum of square deviations: 6662035307.442448
[2025-05-25 16:51:09] 2025-05-25 20:50:53,362 | INFO     | sum of deviations: 67620683700.30936
[2025-05-25 16:51:09] 2025-05-25 20:50:53,362 | INFO     | mean x: 1748197166.5143886
[2025-05-25 16:51:09] 2025-05-25 20:50:53,362 | INFO     | mean y: 2092063.1726618705
[2025-05-25 16:51:09] 2025-05-25 20:50:53,362 | INFO     | -- intersect: -17742378235.65392
[2025-05-25 16:51:09] 2025-05-25 20:50:53,362 | INFO     | intersect: -17742378235.65392
[2025-05-25 16:51:09] 2025-05-25 20:50:53,362 | INFO     | chi2: 2.46151117833318
[2025-05-25 16:51:09] 2025-05-25 20:50:53,362 | INFO     | current chi2=2.46151117833318 (change=0.6641506270842457 %)
[2025-05-25 16:51:09] 2025-05-25 20:50:53,362 | INFO     | right removable region: 277
[2025-05-25 16:51:09] 2025-05-25 20:50:53,363 | INFO     | sum of square deviations: 7028001299.943455
[2025-05-25 16:51:09] 2025-05-25 20:50:53,364 | INFO     | sum of deviations: -13062547056.155481
[2025-05-25 16:51:09] 2025-05-25 20:50:53,364 | INFO     | mean x: 1748197624.0141342
[2025-05-25 16:51:09] 2025-05-25 20:50:53,364 | INFO     | mean y: 2103791.038869258
[2025-05-25 16:51:09] 2025-05-25 20:50:53,364 | INFO     | -- intersect: 3251379474.4863906
[2025-05-25 16:51:09] 2025-05-25 20:50:53,364 | INFO     | intersect: 3251379474.4863906
[2025-05-25 16:51:09] 2025-05-25 20:50:53,365 | INFO     | chi2: 1.2274800890281092
[2025-05-25 16:51:09] 2025-05-25 20:50:53,365 | INFO     | current chi2=1.2274800890281092 (change=63.80790378042077 %)
[2025-05-25 16:51:09] 2025-05-25 20:50:53,365 | INFO     | sum of square deviations: 6662030427.442448
[2025-05-25 16:51:09] 2025-05-25 20:50:53,367 | INFO     | sum of deviations: -20586189619.708637
[2025-05-25 16:51:09] 2025-05-25 20:50:53,367 | INFO     | mean x: 1748197776.5143886
[2025-05-25 16:51:09] 2025-05-25 20:50:53,367 | INFO     | mean y: 2106904.8021582733
[2025-05-25 16:51:09] 2025-05-25 20:50:53,367 | INFO     | -- intersect: 5404173333.6542845
[2025-05-25 16:51:09] 2025-05-25 20:50:53,367 | INFO     | intersect: 5404173333.6542845
[2025-05-25 16:51:09] 2025-05-25 20:50:53,367 | INFO     | chi2: 1.1533368889004327
[2025-05-25 16:51:09] 2025-05-25 20:50:53,367 | INFO     | current chi2=1.1533368889004327 (change=6.040277214303443 %)
[2025-05-25 16:51:09] 2025-05-25 20:50:53,367 | INFO     | left removable region: 20
[2025-05-25 16:51:09] 2025-05-25 20:50:53,368 | INFO     | sum of square deviations: 5263450029.937745
[2025-05-25 16:51:09] 2025-05-25 20:50:53,369 | INFO     | sum of deviations: 5563228193.396888
[2025-05-25 16:51:09] 2025-05-25 20:50:53,369 | INFO     | mean x: 1748197746.0155642
[2025-05-25 16:51:09] 2025-05-25 20:50:53,369 | INFO     | mean y: 2118570.4007782103
[2025-05-25 16:51:09] 2025-05-25 20:50:53,369 | INFO     | -- intersect: -1845647235.8572342
[2025-05-25 16:51:09] 2025-05-25 20:50:53,369 | INFO     | intersect: -1845647235.8572342
[2025-05-25 16:51:09] 2025-05-25 20:50:53,369 | INFO     | chi2: 0.20479407546824754
[2025-05-25 16:51:09] 2025-05-25 20:50:53,369 | INFO     | -- intersect: -1845647235.8572342
[2025-05-25 16:51:09] 2025-05-25 20:50:53,370 | INFO     | current memory leak: 1.06 B/s (using 257 data points, chi2=0.20)
[2025-05-25 16:51:09] 2025-05-25 20:50:53,370 | INFO     | ..............................
[2025-05-25 16:51:09] 2025-05-25 20:50:53,370 | INFO     | . Timing measurements:
[2025-05-25 16:51:09] 2025-05-25 20:50:53,370 | INFO     | . get job = 0 s
[2025-05-25 16:51:09] 2025-05-25 20:50:53,370 | INFO     | . initial setup = 3 s
[2025-05-25 16:51:09] 2025-05-25 20:50:53,370 | INFO     | . payload setup = 15 s
[2025-05-25 16:51:09] 2025-05-25 20:50:53,370 | INFO     | . stage-in = 0 s
[2025-05-25 16:51:09] 2025-05-25 20:50:53,370 | INFO     | . payload execution = 17525 s
[2025-05-25 16:51:09] 2025-05-25 20:50:53,371 | INFO     | . stage-out = 4 s
[2025-05-25 16:51:09] 2025-05-25 20:50:53,371 | INFO     | . log creation = 0 s
[2025-05-25 16:51:09] 2025-05-25 20:50:53,371 | INFO     | ..............................
[2025-05-25 16:51:09] 2025-05-25 20:50:53,484 | INFO     | 
[2025-05-25 16:51:09] 2025-05-25 20:50:53,484 | INFO     | job summary report
[2025-05-25 16:51:09] 2025-05-25 20:50:53,484 | INFO     | --------------------------------------------------
[2025-05-25 16:51:09] 2025-05-25 20:50:53,484 | INFO     | PanDA job id: 6665729625
[2025-05-25 16:51:09] 2025-05-25 20:50:53,484 | INFO     | task id: 44871837
[2025-05-25 16:51:09] 2025-05-25 20:50:53,484 | INFO     | errors: (none)
[2025-05-25 16:51:09] 2025-05-25 20:50:53,484 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 16:51:09] 2025-05-25 20:50:53,484 | INFO     | pilot state: finished 
[2025-05-25 16:51:09] 2025-05-25 20:50:53,484 | INFO     | transexitcode: 0
[2025-05-25 16:51:09] 2025-05-25 20:50:53,484 | INFO     | exeerrorcode: 0
[2025-05-25 16:51:09] 2025-05-25 20:50:53,484 | INFO     | exeerrordiag: 
[2025-05-25 16:51:09] 2025-05-25 20:50:53,484 | INFO     | exitcode: 0
[2025-05-25 16:51:09] 2025-05-25 20:50:53,485 | INFO     | exitmsg: OK
[2025-05-25 16:51:09] 2025-05-25 20:50:53,485 | INFO     | cpuconsumptiontime: 38649 s
[2025-05-25 16:51:09] 2025-05-25 20:50:53,485 | INFO     | nevents: 400
[2025-05-25 16:51:09] 2025-05-25 20:50:53,485 | INFO     | neventsw: 0
[2025-05-25 16:51:09] 2025-05-25 20:50:53,485 | INFO     | pid: 3437024
[2025-05-25 16:51:09] 2025-05-25 20:50:53,485 | INFO     | pgrp: 3437024
[2025-05-25 16:51:09] 2025-05-25 20:50:53,485 | INFO     | corecount: 8
[2025-05-25 16:51:09] 2025-05-25 20:50:53,485 | INFO     | event service: False
[2025-05-25 16:51:09] 2025-05-25 20:50:53,485 | INFO     | sizes: {0: 2393741, 11: 2393741, 13: 2393975, 22: 2394031, 17545: 2425817, 17550: 2434942, 17559: 2435056}
[2025-05-25 16:51:09] 2025-05-25 20:50:53,485 | INFO     | --------------------------------------------------
[2025-05-25 16:51:09] 2025-05-25 20:50:53,485 | INFO     | 
[2025-05-25 16:51:09] 2025-05-25 20:50:53,485 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-25 16:51:09] 2025-05-25 20:50:53,551 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,551 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,551 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,552 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,552 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,552 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,552 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,555 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 16:51:09] 2025-05-25 20:50:53,555 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,555 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 16:51:09] 2025-05-25 20:50:53,556 | INFO     | job 6665729625 has completed (purged errors)
[2025-05-25 16:51:09] 2025-05-25 20:50:53,556 | INFO     | overall cleanup function is called
[2025-05-25 16:51:09] 2025-05-25 20:50:54,568 | INFO     | --- collectZombieJob: --- 10, [3437024]
[2025-05-25 16:51:09] 2025-05-25 20:50:54,568 | INFO     | zombie collector waiting for pid 3437024
[2025-05-25 16:51:09] 2025-05-25 20:50:54,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 16:51:09] 2025-05-25 20:50:54,568 | INFO     | collected zombie processes
[2025-05-25 16:51:09] 2025-05-25 20:50:54,568 | INFO     | will attempt to kill all subprocesses of pid=3437024
[2025-05-25 16:51:09] 2025-05-25 20:50:55,211 | INFO     | process IDs to be killed: [3437024] (in reverse order)
[2025-05-25 16:51:09] 2025-05-25 20:50:55,374 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 16:51:09] 2025-05-25 20:50:55,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 16:51:09] 2025-05-25 20:50:55,403 | INFO     | did not find any defunct processes belonging to 3437024
[2025-05-25 16:51:09] 2025-05-25 20:50:55,424 | INFO     | did not find any defunct processes belonging to 3437024
[2025-05-25 16:51:09] 2025-05-25 20:50:55,425 | INFO     | ready for new job
[2025-05-25 16:51:09] 2025-05-25 20:50:55,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 16:51:09] 2025-05-25 20:50:55,426 | INFO     | **************************************
[2025-05-25 16:51:09] 2025-05-25 20:50:55,427 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 16:51:09] 2025-05-25 20:50:55,427 | INFO     | **************************************
[2025-05-25 16:51:09] 2025-05-25 20:50:55,427 | INFO     | 
[2025-05-25 16:51:09] 2025-05-25 20:50:55,444 | INFO     | architecture information:
[2025-05-25 16:51:09] 2025-05-25 20:50:55,444 | INFO     | executing command: cat /etc/os-release
[2025-05-25 16:51:09] 2025-05-25 20:50:55,459 | INFO     | cat /etc/os-release:
[2025-05-25 16:51:09] NAME="CentOS Linux"
[2025-05-25 16:51:09] VERSION="7 (Core)"
[2025-05-25 16:51:09] ID="centos"
[2025-05-25 16:51:09] ID_LIKE="rhel fedora"
[2025-05-25 16:51:09] VERSION_ID="7"
[2025-05-25 16:51:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 16:51:09] ANSI_COLOR="0;31"
[2025-05-25 16:51:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 16:51:09] HOME_URL="https://www.centos.org/"
[2025-05-25 16:51:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 16:51:09] 
[2025-05-25 16:51:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 16:51:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 16:51:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 16:51:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 16:51:09] 
[2025-05-25 16:51:09] 2025-05-25 20:50:55,459 | INFO     | **************************************
[2025-05-25 16:51:09] 2025-05-25 20:50:55,972 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-25 16:51:09] 2025-05-25 20:50:56,010 | INFO     | sufficient remaining disk space (73823944704 B)
[2025-05-25 16:51:09] 2025-05-25 20:50:56,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 16:51:09] 2025-05-25 20:50:56,010 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 16:51:09] 2025-05-25 20:50:56,010 | INFO     | update_server=False
[2025-05-25 16:51:09] 2025-05-25 20:50:56,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 16:51:09] 2025-05-25 20:50:56,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:51:09] 2025-05-25 20:50:56,027 | INFO     | aborting loop
[2025-05-25 16:51:09] 2025-05-25 20:50:56,027 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 16:51:09] 2025-05-25 20:50:56,028 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 16:51:09] 2025-05-25 20:50:56,028 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 16:51:09] 2025-05-25 20:50:56,028 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 16:51:09] 2025-05-25 20:50:56,605 | INFO     | all job control threads have been joined
[2025-05-25 16:51:09] 2025-05-25 20:50:56,663 | INFO     | all data control threads have been joined
[2025-05-25 16:51:09] 2025-05-25 20:50:57,017 | INFO     | [job] retrieve thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:57,033 | INFO     | [job] job monitor thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:57,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 16:51:09] 2025-05-25 20:50:57,353 | INFO     | all payload control threads have been joined
[2025-05-25 16:51:09] 2025-05-25 20:50:57,545 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:57,554 | INFO     | [job] validate thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:57,611 | INFO     | [job] control thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:57,663 | INFO     | [payload] failed_post thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:57,669 | INFO     | [data] control thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:58,051 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:58,051 | INFO     | [data] copytool_in thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:58,051 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:58,292 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:58,359 | INFO     | [payload] control thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:58,441 | INFO     | [payload] validate_post thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:58,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:51:09] 2025-05-25 20:50:59,203 | INFO     | [data] copytool_out thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:50:59,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 16:51:09] 2025-05-25 20:50:59,507 | INFO     | [job] queue monitor thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:51:03,346 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 16:51:09] 2025-05-25 20:51:04,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140176983349056)>', '<ExcThread(monitor, started 140176609220352)>']
[2025-05-25 16:51:09] 2025-05-25 20:51:05,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 16:51:09] 2025-05-25 20:51:05,081 | INFO     | [monitor] control thread has ended
[2025-05-25 16:51:09] 2025-05-25 20:51:09,401 | INFO     | all workflow threads have been joined
[2025-05-25 16:51:09] 2025-05-25 20:51:09,401 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 16:51:09] 2025-05-25 20:51:09,401 | INFO     | traces error code: 0
[2025-05-25 16:51:09] 2025-05-25 20:51:09,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 16:51:09] 2025-05-25 20:51:09,525 [wrapper] ==== pilot stdout END ====
[2025-05-25 16:51:09] 2025-05-25 20:51:09,528 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 16:51:09] 2025-05-25 20:51:09,530 [wrapper] pilotpid: 3426474
[2025-05-25 16:51:09] 2025-05-25 20:51:09,556 [wrapper] Pilot exit status: 0
[2025-05-25 16:51:09] 2025-05-25 20:51:09,584 [wrapper] pandaids: 6665729625
[2025-05-25 16:51:09] 2025-05-25 20:51:09,720 [wrapper] cleanup supervisor_pilot 1873585 3426475
[2025-05-25 16:51:09] 2025-05-25 20:51:09,723 [wrapper] Test setup, not cleaning
[2025-05-25 16:51:09] 2025-05-25 20:51:09,727 [wrapper] apfmon messages muted
[2025-05-25 16:51:09] 2025-05-25 20:51:09,734 [wrapper] ==== wrapper stdout END ====
[2025-05-25 16:51:09] 2025-05-25 20:51:09,736 [wrapper] ==== wrapper stderr END ====
[2025-05-25 16:51:09]  *** Error codes and diagnostics ***
[2025-05-25 16:51:09]     "exeErrorCode": 0,
[2025-05-25 16:51:09]     "exeErrorDiag": "",
[2025-05-25 16:51:09]     "pilotErrorCode": 0,
[2025-05-25 16:51:09]     "pilotErrorDiag": "",
[2025-05-25 16:51:09]  *** Listing of results directory ***
[2025-05-25 16:51:09] total 418716
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas    495897 May 25 09:09 pilot3.tar.gz
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas      5111 May 25 09:20 queuedata.json
[2025-05-25 16:51:09] -rwx------. 1 boincer umatlas     37140 May 25 09:20 runpilot2-wrapper.sh
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas       100 May 25 11:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 16:51:09] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 11:57 run_atlas
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas       105 May 25 11:57 job.xml
[2025-05-25 16:51:09] -rw-r--r--. 2 boincer umatlas 224003809 May 25 11:57 EVNT.44871834._001402.pool.root.1
[2025-05-25 16:51:09] -rw-r--r--. 2 boincer umatlas     15093 May 25 11:57 start_atlas.sh
[2025-05-25 16:51:09] drwxrwx--x. 2 boincer umatlas      4096 May 25 11:57 shared
[2025-05-25 16:51:09] -rw-r--r--. 2 boincer umatlas    508880 May 25 11:57 input.tar.gz
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas         0 May 25 11:57 boinc_lockfile
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas      2559 May 25 11:57 pandaJob.out
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas    990811 May 25 11:57 agis_schedconf.cvmfs.json
[2025-05-25 16:51:09] drwx------. 4 boincer umatlas      4096 May 25 11:57 pilot3
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas      6934 May 25 16:46 init_data.xml
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas 197262978 May 25 16:49 HITS.44871837._035155.pool.root.1
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas       531 May 25 16:50 boinc_task_state.xml
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas      1037 May 25 16:50 memory_monitor_summary.json
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas   1596740 May 25 16:50 agis_ddmendpoints.agis.ALL.json
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas        95 May 25 16:50 pilot_heartbeat.json
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas    416508 May 25 16:50 log.44871837._035155.job.log.tgz.1
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas      7693 May 25 16:50 heartbeat.json
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas      8192 May 25 16:51 boinc_mmap_file
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas        28 May 25 16:51 wrapper_checkpoint.txt
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas      4476 May 25 16:51 pilotlog.txt
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas   1420009 May 25 16:51 log.44871837._035155.job.log.1
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas       357 May 25 16:51 output.list
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas       620 May 25 16:51 runtime_log
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas   1853440 May 25 16:51 result.tar.gz
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas      8655 May 25 16:51 runtime_log.err
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas       655 May 25 16:51 mFiMDmDSQd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZZOKDmqX0qon.diag
[2025-05-25 16:51:09] -rw-r--r--. 1 boincer umatlas     20938 May 25 16:51 stderr.txt
[2025-05-25 16:51:09] HITS file was successfully produced:
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas 197262978 May 25 16:49 shared/HITS.pool.root.1
[2025-05-25 16:51:09]  *** Contents of shared directory: ***
[2025-05-25 16:51:09] total 413728
[2025-05-25 16:51:09] -rw-r--r--. 2 boincer umatlas 224003809 May 25 11:57 ATLAS.root_0
[2025-05-25 16:51:09] -rw-r--r--. 2 boincer umatlas     15093 May 25 11:57 start_atlas.sh
[2025-05-25 16:51:09] -rw-r--r--. 2 boincer umatlas    508880 May 25 11:57 input.tar.gz
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas 197262978 May 25 16:49 HITS.pool.root.1
[2025-05-25 16:51:09] -rw-------. 1 boincer umatlas   1853440 May 25 16:51 result.tar.gz
16:51:11 (3421946): run_atlas exited; CPU time 39396.908499
16:51:11 (3421946): called boinc_finish(0)

</stderr_txt>
]]>

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