Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:37:01 (3925257): wrapper (7.7.26015): starting
11:37:01 (3925257): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 11:37:01] Arguments: --nthreads 8
[2025-05-25 11:37:01] Threads: 8
[2025-05-25 11:37:01] Checking for CVMFS
[2025-05-25 11:37:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 11:37:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 11:37:02] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 11:37:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 11:37:02] 2.12.6.0 1699072 9082 325936 146407 1 592 24909999 32935936 28818 16776704 0 41105231 99.628 38991640 28758 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 11:37:02] CVMFS is ok
[2025-05-25 11:37:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 11:37:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 11:37:02] Further information can be found at the LHC@home message board.
[2025-05-25 11:37:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 11:37:02] Checking for apptainer binary...
[2025-05-25 11:37:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 11:37:02] Running /usr/bin/apptainer --version
[2025-05-25 11:37:02] apptainer version 1.4.1-1.el9
[2025-05-25 11:37:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 11:37:03] c6-2-11-3.aglt2.org
[2025-05-25 11:37:03] apptainer works
[2025-05-25 11:37:03] Set ATHENA_PROC_NUMBER=8
[2025-05-25 11:37:03] Set ATHENA_CORE_NUMBER=8
[2025-05-25 11:37:03] Starting ATLAS job with PandaID=6665683266
[2025-05-25 11:37:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 16:03:29]  *** The last 200 lines of the pilot log: ***
[2025-05-25 16:03:29] 2025-05-25 20:03:07,657 | INFO     | extracted standard info from prmon json
[2025-05-25 16:03:29] 2025-05-25 20:03:07,657 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 16:03:29] 2025-05-25 20:03:07,657 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 16:03:29] 2025-05-25 20:03:07,657 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 16:03:29] 2025-05-25 20:03:07,657 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 16:03:29] 2025-05-25 20:03:07,690 | INFO     | fitting pss+swap vs Time
[2025-05-25 16:03:29] 2025-05-25 20:03:07,691 | INFO     | sum of square deviations: 5449858174.503809
[2025-05-25 16:03:29] 2025-05-25 20:03:07,711 | INFO     | sum of deviations: 8199987833.992285
[2025-05-25 16:03:29] 2025-05-25 20:03:07,711 | INFO     | mean x: 1748195406.7807693
[2025-05-25 16:03:29] 2025-05-25 20:03:07,711 | INFO     | mean y: 2098938.4384615384
[2025-05-25 16:03:29] 2025-05-25 20:03:07,711 | INFO     | -- intersect: -2628277964.5987763
[2025-05-25 16:03:29] 2025-05-25 20:03:07,711 | INFO     | intersect: -2628277964.5987763
[2025-05-25 16:03:29] 2025-05-25 20:03:07,712 | INFO     | chi2: 3.0435893848786613
[2025-05-25 16:03:29] 2025-05-25 20:03:07,712 | INFO     | sum of square deviations: 5141433877.231395
[2025-05-25 16:03:29] 2025-05-25 20:03:07,740 | INFO     | sum of deviations: 26577045407.627472
[2025-05-25 16:03:29] 2025-05-25 20:03:07,740 | INFO     | mean x: 1748195254.2784314
[2025-05-25 16:03:29] 2025-05-25 20:03:07,741 | INFO     | mean y: 2107912.568627451
[2025-05-25 16:03:29] 2025-05-25 20:03:07,741 | INFO     | -- intersect: -9034644433.914125
[2025-05-25 16:03:29] 2025-05-25 20:03:07,741 | INFO     | intersect: -9034644433.914125
[2025-05-25 16:03:29] 2025-05-25 20:03:07,741 | INFO     | chi2: 2.224243598456711
[2025-05-25 16:03:29] 2025-05-25 20:03:07,741 | INFO     | current chi2=2.224243598456711 (change=26.920378632304082 %)
[2025-05-25 16:03:29] 2025-05-25 20:03:07,742 | INFO     | sum of square deviations: 4844870267.45602
[2025-05-25 16:03:29] 2025-05-25 20:03:07,812 | INFO     | sum of deviations: 27643939500.743988
[2025-05-25 16:03:29] 2025-05-25 20:03:07,812 | INFO     | mean x: 1748195101.776
[2025-05-25 16:03:29] 2025-05-25 20:03:07,812 | INFO     | mean y: 2108456.924
[2025-05-25 16:03:29] 2025-05-25 20:03:07,812 | INFO     | -- intersect: -9972771562.7981
[2025-05-25 16:03:29] 2025-05-25 20:03:07,812 | INFO     | intersect: -9972771562.7981
[2025-05-25 16:03:29] 2025-05-25 20:03:07,813 | INFO     | chi2: 2.2219968550940132
[2025-05-25 16:03:29] 2025-05-25 20:03:07,813 | INFO     | current chi2=2.2219968550940132 (change=0.10101156924792276 %)
[2025-05-25 16:03:29] 2025-05-25 20:03:07,813 | INFO     | right removable region: 249
[2025-05-25 16:03:29] 2025-05-25 20:03:07,813 | INFO     | sum of square deviations: 5141420824.10196
[2025-05-25 16:03:29] 2025-05-25 20:03:07,815 | INFO     | sum of deviations: -34286347024.956863
[2025-05-25 16:03:29] 2025-05-25 20:03:07,834 | INFO     | mean x: 1748195559.2862744
[2025-05-25 16:03:29] 2025-05-25 20:03:07,834 | INFO     | mean y: 2119843.6980392155
[2025-05-25 16:03:29] 2025-05-25 20:03:07,835 | INFO     | -- intersect: 11660227916.119286
[2025-05-25 16:03:29] 2025-05-25 20:03:07,835 | INFO     | intersect: 11660227916.119286
[2025-05-25 16:03:29] 2025-05-25 20:03:07,835 | INFO     | chi2: 1.3130491015216468
[2025-05-25 16:03:29] 2025-05-25 20:03:07,835 | INFO     | current chi2=1.3130491015216468 (change=56.85853328161762 %)
[2025-05-25 16:03:29] 2025-05-25 20:03:07,836 | INFO     | sum of square deviations: 4844844161.183989
[2025-05-25 16:03:29] 2025-05-25 20:03:07,837 | INFO     | sum of deviations: -49075682341.32001
[2025-05-25 16:03:29] 2025-05-25 20:03:07,837 | INFO     | mean x: 1748195711.792
[2025-05-25 16:03:29] 2025-05-25 20:03:07,837 | INFO     | mean y: 2127416.84
[2025-05-25 16:03:29] 2025-05-25 20:03:07,838 | INFO     | -- intersect: 17710415767.934376
[2025-05-25 16:03:29] 2025-05-25 20:03:07,838 | INFO     | intersect: 17710415767.934376
[2025-05-25 16:03:29] 2025-05-25 20:03:07,859 | INFO     | chi2: 1.081802393037771
[2025-05-25 16:03:29] 2025-05-25 20:03:07,859 | INFO     | current chi2=1.081802393037771 (change=17.611428865523163 %)
[2025-05-25 16:03:29] 2025-05-25 20:03:07,859 | INFO     | left removable region: 20
[2025-05-25 16:03:29] 2025-05-25 20:03:07,860 | INFO     | sum of square deviations: 3723589764.5502133
[2025-05-25 16:03:29] 2025-05-25 20:03:07,861 | INFO     | sum of deviations: -21207728458.22709
[2025-05-25 16:03:29] 2025-05-25 20:03:07,862 | INFO     | mean x: 1748195681.2838428
[2025-05-25 16:03:29] 2025-05-25 20:03:07,862 | INFO     | mean y: 2134128.80349345
[2025-05-25 16:03:29] 2025-05-25 20:03:07,862 | INFO     | -- intersect: 9958993408.384071
[2025-05-25 16:03:29] 2025-05-25 20:03:07,862 | INFO     | intersect: 9958993408.384071
[2025-05-25 16:03:29] 2025-05-25 20:03:07,862 | INFO     | chi2: 0.18254095963850508
[2025-05-25 16:03:29] 2025-05-25 20:03:07,862 | INFO     | -- intersect: 9958993408.384071
[2025-05-25 16:03:29] 2025-05-25 20:03:07,862 | INFO     | current memory leak: -5.70 B/s (using 229 data points, chi2=0.18)
[2025-05-25 16:03:29] 2025-05-25 20:03:07,882 | INFO     | ..............................
[2025-05-25 16:03:29] 2025-05-25 20:03:07,883 | INFO     | . Timing measurements:
[2025-05-25 16:03:29] 2025-05-25 20:03:07,883 | INFO     | . get job = 0 s
[2025-05-25 16:03:29] 2025-05-25 20:03:07,883 | INFO     | . initial setup = 4 s
[2025-05-25 16:03:29] 2025-05-25 20:03:07,883 | INFO     | . payload setup = 14 s
[2025-05-25 16:03:29] 2025-05-25 20:03:07,883 | INFO     | . stage-in = 0 s
[2025-05-25 16:03:29] 2025-05-25 20:03:07,883 | INFO     | . payload execution = 15851 s
[2025-05-25 16:03:29] 2025-05-25 20:03:07,883 | INFO     | . stage-out = 4 s
[2025-05-25 16:03:29] 2025-05-25 20:03:07,883 | INFO     | . log creation = 0 s
[2025-05-25 16:03:29] 2025-05-25 20:03:07,883 | INFO     | ..............................
[2025-05-25 16:03:29] 2025-05-25 20:03:08,352 | INFO     | 
[2025-05-25 16:03:29] 2025-05-25 20:03:08,352 | INFO     | job summary report
[2025-05-25 16:03:29] 2025-05-25 20:03:08,352 | INFO     | --------------------------------------------------
[2025-05-25 16:03:29] 2025-05-25 20:03:08,352 | INFO     | PanDA job id: 6665683266
[2025-05-25 16:03:29] 2025-05-25 20:03:08,352 | INFO     | task id: 44871837
[2025-05-25 16:03:29] 2025-05-25 20:03:08,352 | INFO     | errors: (none)
[2025-05-25 16:03:29] 2025-05-25 20:03:08,352 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 16:03:29] 2025-05-25 20:03:08,352 | INFO     | pilot state: finished 
[2025-05-25 16:03:29] 2025-05-25 20:03:08,352 | INFO     | transexitcode: 0
[2025-05-25 16:03:29] 2025-05-25 20:03:08,352 | INFO     | exeerrorcode: 0
[2025-05-25 16:03:29] 2025-05-25 20:03:08,352 | INFO     | exeerrordiag: 
[2025-05-25 16:03:29] 2025-05-25 20:03:08,352 | INFO     | exitcode: 0
[2025-05-25 16:03:29] 2025-05-25 20:03:08,353 | INFO     | exitmsg: OK
[2025-05-25 16:03:29] 2025-05-25 20:03:08,353 | INFO     | cpuconsumptiontime: 51834 s
[2025-05-25 16:03:29] 2025-05-25 20:03:08,353 | INFO     | nevents: 400
[2025-05-25 16:03:29] 2025-05-25 20:03:08,353 | INFO     | neventsw: 0
[2025-05-25 16:03:29] 2025-05-25 20:03:08,353 | INFO     | pid: 3947622
[2025-05-25 16:03:29] 2025-05-25 20:03:08,353 | INFO     | pgrp: 3947622
[2025-05-25 16:03:29] 2025-05-25 20:03:08,353 | INFO     | corecount: 8
[2025-05-25 16:03:29] 2025-05-25 20:03:08,353 | INFO     | event service: False
[2025-05-25 16:03:29] 2025-05-25 20:03:08,353 | INFO     | sizes: {0: 2393569, 1: 2393768, 12: 2393768, 14: 2394002, 22: 2394030, 15871: 2424967, 15872: 2425094, 15878: 2434091, 15880: 2434147, 15909: 2434317}
[2025-05-25 16:03:29] 2025-05-25 20:03:08,353 | INFO     | --------------------------------------------------
[2025-05-25 16:03:29] 2025-05-25 20:03:08,353 | INFO     | 
[2025-05-25 16:03:29] 2025-05-25 20:03:08,353 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-25 16:03:29] 2025-05-25 20:03:08,461 | INFO     | PID=3929632 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 16:03:29] 2025-05-25 20:03:08,462 | INFO     | .. there are 42 such processes running
[2025-05-25 16:03:29] 2025-05-25 20:03:08,470 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,471 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,472 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 16:03:29] 2025-05-25 20:03:08,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,472 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 16:03:29] 2025-05-25 20:03:08,472 | INFO     | job 6665683266 has completed (purged errors)
[2025-05-25 16:03:29] 2025-05-25 20:03:08,472 | INFO     | overall cleanup function is called
[2025-05-25 16:03:29] 2025-05-25 20:03:09,480 | INFO     | --- collectZombieJob: --- 10, [3947622]
[2025-05-25 16:03:29] 2025-05-25 20:03:09,480 | INFO     | zombie collector waiting for pid 3947622
[2025-05-25 16:03:29] 2025-05-25 20:03:09,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 16:03:29] 2025-05-25 20:03:09,481 | INFO     | collected zombie processes
[2025-05-25 16:03:29] 2025-05-25 20:03:09,481 | INFO     | will attempt to kill all subprocesses of pid=3947622
[2025-05-25 16:03:29] 2025-05-25 20:03:12,523 | INFO     | process IDs to be killed: [3947622] (in reverse order)
[2025-05-25 16:03:29] 2025-05-25 20:03:12,868 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 16:03:29] 2025-05-25 20:03:12,868 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 16:03:29] 2025-05-25 20:03:12,907 | INFO     | did not find any defunct processes belonging to 3947622
[2025-05-25 16:03:29] 2025-05-25 20:03:12,946 | INFO     | did not find any defunct processes belonging to 3947622
[2025-05-25 16:03:29] 2025-05-25 20:03:12,946 | INFO     | ready for new job
[2025-05-25 16:03:29] 2025-05-25 20:03:12,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 16:03:29] 2025-05-25 20:03:12,948 | INFO     | **************************************
[2025-05-25 16:03:29] 2025-05-25 20:03:12,949 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 16:03:29] 2025-05-25 20:03:12,949 | INFO     | **************************************
[2025-05-25 16:03:29] 2025-05-25 20:03:12,949 | INFO     | 
[2025-05-25 16:03:29] 2025-05-25 20:03:12,962 | INFO     | architecture information:
[2025-05-25 16:03:29] 2025-05-25 20:03:12,963 | INFO     | executing command: cat /etc/os-release
[2025-05-25 16:03:29] 2025-05-25 20:03:13,006 | INFO     | cat /etc/os-release:
[2025-05-25 16:03:29] NAME="CentOS Linux"
[2025-05-25 16:03:29] VERSION="7 (Core)"
[2025-05-25 16:03:29] ID="centos"
[2025-05-25 16:03:29] ID_LIKE="rhel fedora"
[2025-05-25 16:03:29] VERSION_ID="7"
[2025-05-25 16:03:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 16:03:29] ANSI_COLOR="0;31"
[2025-05-25 16:03:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 16:03:29] HOME_URL="https://www.centos.org/"
[2025-05-25 16:03:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 16:03:29] 
[2025-05-25 16:03:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 16:03:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 16:03:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 16:03:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 16:03:29] 
[2025-05-25 16:03:29] 2025-05-25 20:03:13,007 | INFO     | **************************************
[2025-05-25 16:03:29] 2025-05-25 20:03:13,510 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-25 16:03:29] 2025-05-25 20:03:13,601 | INFO     | sufficient remaining disk space (73935093760 B)
[2025-05-25 16:03:29] 2025-05-25 20:03:13,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 16:03:29] 2025-05-25 20:03:13,602 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 16:03:29] 2025-05-25 20:03:13,602 | INFO     | update_server=False
[2025-05-25 16:03:29] 2025-05-25 20:03:13,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 16:03:29] 2025-05-25 20:03:13,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:03:29] 2025-05-25 20:03:13,880 | INFO     | all data control threads have been joined
[2025-05-25 16:03:29] 2025-05-25 20:03:13,903 | INFO     | all payload control threads have been joined
[2025-05-25 16:03:29] 2025-05-25 20:03:14,577 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 16:03:29] 2025-05-25 20:03:14,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 16:03:29] 2025-05-25 20:03:14,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 16:03:29] 2025-05-25 20:03:14,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:03:29] 2025-05-25 20:03:14,598 | INFO     | aborting loop
[2025-05-25 16:03:29] 2025-05-25 20:03:14,608 | INFO     | [job] retrieve thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:14,609 | INFO     | [job] queue monitor thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:14,715 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:14,716 | INFO     | [data] copytool_in thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:14,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 16:03:29] 2025-05-25 20:03:14,894 | INFO     | [data] control thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:14,909 | INFO     | [payload] control thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:15,136 | INFO     | [job] validate thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:15,144 | INFO     | all job control threads have been joined
[2025-05-25 16:03:29] 2025-05-25 20:03:15,364 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:15,604 | INFO     | [job] job monitor thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:15,752 | INFO     | [payload] failed_post thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:15,785 | INFO     | [payload] validate_post thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:16,070 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:16,095 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:16,149 | INFO     | [job] control thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:16,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 16:03:29] 2025-05-25 20:03:16,734 | INFO     | [data] copytool_out thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:20,380 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 16:03:29] 2025-05-25 20:03:22,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139777770530624)>', '<ExcThread(monitor, started 139777135331072)>']
[2025-05-25 16:03:29] 2025-05-25 20:03:22,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 16:03:29] 2025-05-25 20:03:22,661 | INFO     | [monitor] control thread has ended
[2025-05-25 16:03:29] 2025-05-25 20:03:27,292 | INFO     | all workflow threads have been joined
[2025-05-25 16:03:29] 2025-05-25 20:03:27,292 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 16:03:29] 2025-05-25 20:03:27,293 | INFO     | traces error code: 0
[2025-05-25 16:03:29] 2025-05-25 20:03:27,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 16:03:29] 2025-05-25 20:03:28,242 [wrapper] ==== pilot stdout END ====
[2025-05-25 16:03:29] 2025-05-25 20:03:28,281 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 16:03:29] 2025-05-25 20:03:28,325 [wrapper] pilotpid: 3929632
[2025-05-25 16:03:29] 2025-05-25 20:03:28,340 [wrapper] Pilot exit status: 0
[2025-05-25 16:03:29] 2025-05-25 20:03:28,457 [wrapper] pandaids: 6665683266
[2025-05-25 16:03:29] 2025-05-25 20:03:28,966 [wrapper] cleanup supervisor_pilot 1649525 3929633
[2025-05-25 16:03:29] 2025-05-25 20:03:28,979 [wrapper] Test setup, not cleaning
[2025-05-25 16:03:29] 2025-05-25 20:03:29,002 [wrapper] apfmon messages muted
[2025-05-25 16:03:29] 2025-05-25 20:03:29,031 [wrapper] ==== wrapper stdout END ====
[2025-05-25 16:03:29] 2025-05-25 20:03:29,051 [wrapper] ==== wrapper stderr END ====
[2025-05-25 16:03:29]  *** Error codes and diagnostics ***
[2025-05-25 16:03:29]     "exeErrorCode": 0,
[2025-05-25 16:03:29]     "exeErrorDiag": "",
[2025-05-25 16:03:29]     "pilotErrorCode": 0,
[2025-05-25 16:03:29]     "pilotErrorDiag": "",
[2025-05-25 16:03:29]  *** Listing of results directory ***
[2025-05-25 16:03:29] total 417488
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas    495897 May 24 19:44 pilot3.tar.gz
[2025-05-25 16:03:29] -rwx------. 1 boincer umatlas     37140 May 24 19:46 runpilot2-wrapper.sh
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas      5111 May 24 19:46 queuedata.json
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas       100 May 25 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 16:03:29] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 11:37 run_atlas
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas       105 May 25 11:37 job.xml
[2025-05-25 16:03:29] -rw-r--r--. 2 boincer umatlas 224202031 May 25 11:37 EVNT.44871834._001031.pool.root.1
[2025-05-25 16:03:29] -rw-r--r--. 2 boincer umatlas     15093 May 25 11:37 start_atlas.sh
[2025-05-25 16:03:29] drwxrwx--x. 2 boincer umatlas      4096 May 25 11:37 shared
[2025-05-25 16:03:29] -rw-r--r--. 2 boincer umatlas    508868 May 25 11:37 input.tar.gz
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas         0 May 25 11:37 boinc_lockfile
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas      2558 May 25 11:37 pandaJob.out
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas    990811 May 25 11:37 agis_schedconf.cvmfs.json
[2025-05-25 16:03:29] drwx------. 4 boincer umatlas      4096 May 25 11:37 pilot3
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas      6853 May 25 15:57 init_data.xml
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas 196133473 May 25 16:01 HITS.44871837._025861.pool.root.1
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas       531 May 25 16:01 boinc_task_state.xml
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas      1047 May 25 16:02 memory_monitor_summary.json
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas        95 May 25 16:02 pilot_heartbeat.json
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas   1596740 May 25 16:02 agis_ddmendpoints.agis.ALL.json
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas    405185 May 25 16:02 log.44871837._025861.job.log.tgz.1
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas      7730 May 25 16:03 heartbeat.json
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas      8192 May 25 16:03 boinc_mmap_file
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas        28 May 25 16:03 wrapper_checkpoint.txt
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas      4353 May 25 16:03 pilotlog.txt
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas   1263547 May 25 16:03 log.44871837._025861.job.log.1
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas       357 May 25 16:03 output.list
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas       620 May 25 16:03 runtime_log
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas   1689600 May 25 16:03 result.tar.gz
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas      8665 May 25 16:03 runtime_log.err
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas       656 May 25 16:03 QeKLDmikDd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvrSKDm5RLE7m.diag
[2025-05-25 16:03:29] -rw-r--r--. 1 boincer umatlas     20969 May 25 16:03 stderr.txt
[2025-05-25 16:03:29] HITS file was successfully produced:
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas 196133473 May 25 16:01 shared/HITS.pool.root.1
[2025-05-25 16:03:29]  *** Contents of shared directory: ***
[2025-05-25 16:03:29] total 412664
[2025-05-25 16:03:29] -rw-r--r--. 2 boincer umatlas 224202031 May 25 11:37 ATLAS.root_0
[2025-05-25 16:03:29] -rw-r--r--. 2 boincer umatlas     15093 May 25 11:37 start_atlas.sh
[2025-05-25 16:03:29] -rw-r--r--. 2 boincer umatlas    508868 May 25 11:37 input.tar.gz
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas 196133473 May 25 16:01 HITS.pool.root.1
[2025-05-25 16:03:29] -rw-------. 1 boincer umatlas   1689600 May 25 16:03 result.tar.gz
16:03:31 (3925257): run_atlas exited; CPU time 52570.635061
16:03:31 (3925257): called boinc_finish(0)

</stderr_txt>
]]>

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