Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:45:18 (2789149): wrapper (7.7.26015): starting
11:45:18 (2789149): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 11:45:18] Arguments: --nthreads 8
[2025-05-25 11:45:18] Threads: 8
[2025-05-25 11:45:18] Checking for CVMFS
[2025-05-25 11:45:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 11:45:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 11:45:19] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 11:45:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 11:45:19] 2.12.6.0 7887 23106 517768 146407 3 359 28046401 32935936 33420 16776704 0 228793723 99.694 183191325 22694 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 11:45:19] CVMFS is ok
[2025-05-25 11:45:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 11:45:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 11:45:19] Further information can be found at the LHC@home message board.
[2025-05-25 11:45:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 11:45:19] Checking for apptainer binary...
[2025-05-25 11:45:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 11:45:19] Running /usr/bin/apptainer --version
[2025-05-25 11:45:19] apptainer version 1.4.1-1.el9
[2025-05-25 11:45:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 11:45:20] c7-3-28.aglt2.org
[2025-05-25 11:45:20] apptainer works
[2025-05-25 11:45:20] Set ATHENA_PROC_NUMBER=8
[2025-05-25 11:45:20] Set ATHENA_CORE_NUMBER=8
[2025-05-25 11:45:20] Starting ATLAS job with PandaID=6665722644
[2025-05-25 11:45:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 16:33:42]  *** The last 200 lines of the pilot log: ***
[2025-05-25 16:33:42] 2025-05-25 20:33:02,863 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 16:33:42] 2025-05-25 20:33:02,863 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6665722644/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 16:33:42] 2025-05-25 20:33:02,935 | INFO     | extracted standard info from prmon json
[2025-05-25 16:33:42] 2025-05-25 20:33:02,935 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 16:33:42] 2025-05-25 20:33:02,935 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 16:33:42] 2025-05-25 20:33:02,936 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 16:33:42] 2025-05-25 20:33:02,936 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 16:33:42] 2025-05-25 20:33:02,996 | INFO     | fitting pss+swap vs Time
[2025-05-25 16:33:42] 2025-05-25 20:33:02,997 | INFO     | sum of square deviations: 6880004346.007074
[2025-05-25 16:33:42] 2025-05-25 20:33:03,094 | INFO     | sum of deviations: 4155204163.864811
[2025-05-25 16:33:42] 2025-05-25 20:33:03,094 | INFO     | mean x: 1748196564.1032028
[2025-05-25 16:33:42] 2025-05-25 20:33:03,094 | INFO     | mean y: 2116952.0391459074
[2025-05-25 16:33:42] 2025-05-25 20:33:03,094 | INFO     | -- intersect: -1053712852.2881776
[2025-05-25 16:33:42] 2025-05-25 20:33:03,094 | INFO     | intersect: -1053712852.2881776
[2025-05-25 16:33:42] 2025-05-25 20:33:03,095 | INFO     | chi2: 3.235007544355068
[2025-05-25 16:33:42] 2025-05-25 20:33:03,095 | INFO     | sum of square deviations: 6519243635.952894
[2025-05-25 16:33:42] 2025-05-25 20:33:03,176 | INFO     | sum of deviations: 24163348040.0217
[2025-05-25 16:33:42] 2025-05-25 20:33:03,176 | INFO     | mean x: 1748196411.6050725
[2025-05-25 16:33:42] 2025-05-25 20:33:03,176 | INFO     | mean y: 2125301.413043478
[2025-05-25 16:33:42] 2025-05-25 20:33:03,176 | INFO     | -- intersect: -6477503424.681652
[2025-05-25 16:33:42] 2025-05-25 20:33:03,176 | INFO     | intersect: -6477503424.681652
[2025-05-25 16:33:42] 2025-05-25 20:33:03,177 | INFO     | chi2: 2.376802250906978
[2025-05-25 16:33:42] 2025-05-25 20:33:03,177 | INFO     | current chi2=2.376802250906978 (change=26.52869527137941 %)
[2025-05-25 16:33:42] 2025-05-25 20:33:03,177 | INFO     | sum of square deviations: 6171320375.896662
[2025-05-25 16:33:42] 2025-05-25 20:33:03,179 | INFO     | sum of deviations: 24553203751.442825
[2025-05-25 16:33:42] 2025-05-25 20:33:03,179 | INFO     | mean x: 1748196259.107011
[2025-05-25 16:33:42] 2025-05-25 20:33:03,179 | INFO     | mean y: 2125473.3985239854
[2025-05-25 16:33:42] 2025-05-25 20:33:03,179 | INFO     | -- intersect: -6953244906.498171
[2025-05-25 16:33:42] 2025-05-25 20:33:03,179 | INFO     | intersect: -6953244906.498171
[2025-05-25 16:33:42] 2025-05-25 20:33:03,179 | INFO     | chi2: 2.3769826113603902
[2025-05-25 16:33:42] 2025-05-25 20:33:03,179 | INFO     | current chi2=2.3769826113603902 (change=-0.00758836597968861 %)
[2025-05-25 16:33:42] 2025-05-25 20:33:03,179 | INFO     | right removable region: 270
[2025-05-25 16:33:42] 2025-05-25 20:33:03,202 | INFO     | sum of square deviations: 6519225945.952894
[2025-05-25 16:33:42] 2025-05-25 20:33:03,204 | INFO     | sum of deviations: -47879769444.36233
[2025-05-25 16:33:42] 2025-05-25 20:33:03,204 | INFO     | mean x: 1748196716.6050725
[2025-05-25 16:33:42] 2025-05-25 20:33:03,204 | INFO     | mean y: 2138843.115942029
[2025-05-25 16:33:42] 2025-05-25 20:33:03,204 | INFO     | -- intersect: 12841585800.22052
[2025-05-25 16:33:42] 2025-05-25 20:33:03,204 | INFO     | intersect: 12841585800.22052
[2025-05-25 16:33:42] 2025-05-25 20:33:03,204 | INFO     | chi2: 1.1255550380248052
[2025-05-25 16:33:42] 2025-05-25 20:33:03,204 | INFO     | current chi2=1.1255550380248052 (change=65.20703514312218 %)
[2025-05-25 16:33:42] 2025-05-25 20:33:03,205 | INFO     | sum of square deviations: 6171284995.896662
[2025-05-25 16:33:42] 2025-05-25 20:33:03,214 | INFO     | sum of deviations: -52671375146.43172
[2025-05-25 16:33:42] 2025-05-25 20:33:03,214 | INFO     | mean x: 1748196869.107011
[2025-05-25 16:33:42] 2025-05-25 20:33:03,215 | INFO     | mean y: 2140906.9114391143
[2025-05-25 16:33:42] 2025-05-25 20:33:03,215 | INFO     | -- intersect: 14922847564.240906
[2025-05-25 16:33:42] 2025-05-25 20:33:03,215 | INFO     | intersect: 14922847564.240906
[2025-05-25 16:33:42] 2025-05-25 20:33:03,215 | INFO     | chi2: 1.046821007585345
[2025-05-25 16:33:42] 2025-05-25 20:33:03,215 | INFO     | current chi2=1.046821007585345 (change=6.995129316610547 %)
[2025-05-25 16:33:42] 2025-05-25 20:33:03,215 | INFO     | left removable region: 20
[2025-05-25 16:33:42] 2025-05-25 20:33:03,216 | INFO     | sum of square deviations: 4844908407.1360235
[2025-05-25 16:33:42] 2025-05-25 20:33:03,217 | INFO     | sum of deviations: -19957521244.632
[2025-05-25 16:33:42] 2025-05-25 20:33:03,217 | INFO     | mean x: 1748196838.616
[2025-05-25 16:33:42] 2025-05-25 20:33:03,217 | INFO     | mean y: 2145096.108
[2025-05-25 16:33:42] 2025-05-25 20:33:03,217 | INFO     | -- intersect: 7203452657.482869
[2025-05-25 16:33:42] 2025-05-25 20:33:03,217 | INFO     | intersect: 7203452657.482869
[2025-05-25 16:33:42] 2025-05-25 20:33:03,218 | INFO     | chi2: 0.1375505021689373
[2025-05-25 16:33:42] 2025-05-25 20:33:03,236 | INFO     | -- intersect: 7203452657.482869
[2025-05-25 16:33:42] 2025-05-25 20:33:03,236 | INFO     | current memory leak: -4.12 B/s (using 250 data points, chi2=0.14)
[2025-05-25 16:33:42] 2025-05-25 20:33:03,237 | INFO     | ..............................
[2025-05-25 16:33:42] 2025-05-25 20:33:03,237 | INFO     | . Timing measurements:
[2025-05-25 16:33:42] 2025-05-25 20:33:03,237 | INFO     | . get job = 0 s
[2025-05-25 16:33:42] 2025-05-25 20:33:03,237 | INFO     | . initial setup = 3 s
[2025-05-25 16:33:42] 2025-05-25 20:33:03,237 | INFO     | . payload setup = 21 s
[2025-05-25 16:33:42] 2025-05-25 20:33:03,237 | INFO     | . stage-in = 0 s
[2025-05-25 16:33:42] 2025-05-25 20:33:03,237 | INFO     | . payload execution = 17136 s
[2025-05-25 16:33:42] 2025-05-25 20:33:03,237 | INFO     | . stage-out = 5 s
[2025-05-25 16:33:42] 2025-05-25 20:33:03,237 | INFO     | . log creation = 0 s
[2025-05-25 16:33:42] 2025-05-25 20:33:03,237 | INFO     | ..............................
[2025-05-25 16:33:42] 2025-05-25 20:33:03,790 | INFO     | 
[2025-05-25 16:33:42] 2025-05-25 20:33:03,795 | INFO     | job summary report
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | --------------------------------------------------
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | PanDA job id: 6665722644
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | task id: 44871837
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | errors: (none)
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | pilot state: finished 
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | transexitcode: 0
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | exeerrorcode: 0
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | exeerrordiag: 
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | exitcode: 0
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | exitmsg: OK
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | cpuconsumptiontime: 40033 s
[2025-05-25 16:33:42] 2025-05-25 20:33:03,796 | INFO     | nevents: 400
[2025-05-25 16:33:42] 2025-05-25 20:33:03,797 | INFO     | neventsw: 0
[2025-05-25 16:33:42] 2025-05-25 20:33:03,797 | INFO     | pid: 2824902
[2025-05-25 16:33:42] 2025-05-25 20:33:03,797 | INFO     | pgrp: 2824902
[2025-05-25 16:33:42] 2025-05-25 20:33:03,797 | INFO     | corecount: 8
[2025-05-25 16:33:42] 2025-05-25 20:33:03,797 | INFO     | event service: False
[2025-05-25 16:33:42] 2025-05-25 20:33:03,797 | INFO     | sizes: {0: 2393690, 1: 2393690, 11: 2393718, 14: 2393952, 22: 2393980, 17163: 2425582, 17170: 2434523, 17171: 2434579, 17194: 2434749}
[2025-05-25 16:33:42] 2025-05-25 20:33:03,797 | INFO     | --------------------------------------------------
[2025-05-25 16:33:42] 2025-05-25 20:33:03,797 | INFO     | 
[2025-05-25 16:33:42] 2025-05-25 20:33:03,797 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-25 16:33:42] 2025-05-25 20:33:04,022 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,022 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,022 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,022 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,023 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,044 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,044 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,044 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,044 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,044 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,044 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,044 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 16:33:42] 2025-05-25 20:33:04,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,045 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 16:33:42] 2025-05-25 20:33:04,045 | INFO     | job 6665722644 has completed (purged errors)
[2025-05-25 16:33:42] 2025-05-25 20:33:04,045 | INFO     | overall cleanup function is called
[2025-05-25 16:33:42] 2025-05-25 20:33:05,112 | INFO     | --- collectZombieJob: --- 10, [2824902]
[2025-05-25 16:33:42] 2025-05-25 20:33:05,112 | INFO     | zombie collector waiting for pid 2824902
[2025-05-25 16:33:42] 2025-05-25 20:33:05,112 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 16:33:42] 2025-05-25 20:33:05,112 | INFO     | collected zombie processes
[2025-05-25 16:33:42] 2025-05-25 20:33:05,112 | INFO     | will attempt to kill all subprocesses of pid=2824902
[2025-05-25 16:33:42] 2025-05-25 20:33:08,792 | INFO     | process IDs to be killed: [2824902] (in reverse order)
[2025-05-25 16:33:42] 2025-05-25 20:33:09,164 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 16:33:42] 2025-05-25 20:33:09,164 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 16:33:42] 2025-05-25 20:33:09,280 | INFO     | did not find any defunct processes belonging to 2824902
[2025-05-25 16:33:42] 2025-05-25 20:33:09,436 | INFO     | did not find any defunct processes belonging to 2824902
[2025-05-25 16:33:42] 2025-05-25 20:33:09,436 | INFO     | ready for new job
[2025-05-25 16:33:42] 2025-05-25 20:33:09,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 16:33:42] 2025-05-25 20:33:09,463 | INFO     | **************************************
[2025-05-25 16:33:42] 2025-05-25 20:33:09,464 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 16:33:42] 2025-05-25 20:33:09,464 | INFO     | **************************************
[2025-05-25 16:33:42] 2025-05-25 20:33:09,464 | INFO     | 
[2025-05-25 16:33:42] 2025-05-25 20:33:09,519 | INFO     | architecture information:
[2025-05-25 16:33:42] 2025-05-25 20:33:09,542 | INFO     | executing command: cat /etc/os-release
[2025-05-25 16:33:42] 2025-05-25 20:33:09,749 | INFO     | cat /etc/os-release:
[2025-05-25 16:33:42] NAME="CentOS Linux"
[2025-05-25 16:33:42] VERSION="7 (Core)"
[2025-05-25 16:33:42] ID="centos"
[2025-05-25 16:33:42] ID_LIKE="rhel fedora"
[2025-05-25 16:33:42] VERSION_ID="7"
[2025-05-25 16:33:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 16:33:42] ANSI_COLOR="0;31"
[2025-05-25 16:33:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 16:33:42] HOME_URL="https://www.centos.org/"
[2025-05-25 16:33:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 16:33:42] 
[2025-05-25 16:33:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 16:33:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 16:33:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 16:33:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 16:33:42] 
[2025-05-25 16:33:42] 2025-05-25 20:33:09,749 | INFO     | **************************************
[2025-05-25 16:33:42] 2025-05-25 20:33:10,253 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-25 16:33:42] 2025-05-25 20:33:10,369 | INFO     | sufficient remaining disk space (73890004992 B)
[2025-05-25 16:33:42] 2025-05-25 20:33:10,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 16:33:42] 2025-05-25 20:33:10,369 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 16:33:42] 2025-05-25 20:33:10,370 | INFO     | update_server=False
[2025-05-25 16:33:42] 2025-05-25 20:33:10,370 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 16:33:42] 2025-05-25 20:33:10,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 16:33:42] 2025-05-25 20:33:10,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:33:42] 2025-05-25 20:33:10,370 | INFO     | aborting loop
[2025-05-25 16:33:42] 2025-05-25 20:33:10,400 | INFO     | all job control threads have been joined
[2025-05-25 16:33:42] 2025-05-25 20:33:10,825 | INFO     | all data control threads have been joined
[2025-05-25 16:33:42] 2025-05-25 20:33:11,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 16:33:42] 2025-05-25 20:33:11,170 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 16:33:42] 2025-05-25 20:33:11,170 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 16:33:42] 2025-05-25 20:33:11,170 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 16:33:42] 2025-05-25 20:33:11,376 | INFO     | [job] retrieve thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:11,380 | INFO     | [job] job monitor thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:11,407 | INFO     | [job] control thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:11,562 | INFO     | [job] validate thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:11,587 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:11,603 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:11,603 | INFO     | [data] copytool_in thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:11,800 | INFO     | all payload control threads have been joined
[2025-05-25 16:33:42] 2025-05-25 20:33:11,845 | INFO     | [data] control thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:12,050 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:12,353 | INFO     | [payload] failed_post thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:12,354 | INFO     | [payload] validate_post thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:12,555 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:12,808 | INFO     | [payload] control thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:13,046 | INFO     | [data] copytool_out thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:13,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:33:42] 2025-05-25 20:33:14,181 | INFO     | [job] queue monitor thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:14,405 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 16:33:42] 2025-05-25 20:33:15,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139777053108032)>', '<ExcThread(monitor, started 139776262915840)>']
[2025-05-25 16:33:42] 2025-05-25 20:33:16,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 16:33:42] 2025-05-25 20:33:16,211 | INFO     | [monitor] control thread has ended
[2025-05-25 16:33:42] 2025-05-25 20:33:20,409 | INFO     | all workflow threads have been joined
[2025-05-25 16:33:42] 2025-05-25 20:33:20,409 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 16:33:42] 2025-05-25 20:33:20,409 | INFO     | traces error code: 0
[2025-05-25 16:33:42] 2025-05-25 20:33:20,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 16:33:42] 2025-05-25 20:33:21,011 [wrapper] ==== pilot stdout END ====
[2025-05-25 16:33:42] 2025-05-25 20:33:21,046 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 16:33:42] 2025-05-25 20:33:21,050 [wrapper] pilotpid: 2804120
[2025-05-25 16:33:42] 2025-05-25 20:33:21,053 [wrapper] Pilot exit status: 0
[2025-05-25 16:33:42] 2025-05-25 20:33:21,131 [wrapper] pandaids: 6665722644
[2025-05-25 16:33:42] 2025-05-25 20:33:21,444 [wrapper] cleanup supervisor_pilot 3451375 2804121
[2025-05-25 16:33:42] 2025-05-25 20:33:21,495 [wrapper] Test setup, not cleaning
[2025-05-25 16:33:42] 2025-05-25 20:33:21,510 [wrapper] apfmon messages muted
[2025-05-25 16:33:42] 2025-05-25 20:33:21,535 [wrapper] ==== wrapper stdout END ====
[2025-05-25 16:33:42] 2025-05-25 20:33:21,544 [wrapper] ==== wrapper stderr END ====
[2025-05-25 16:33:42]  *** Error codes and diagnostics ***
[2025-05-25 16:33:42]     "exeErrorCode": 0,
[2025-05-25 16:33:42]     "exeErrorDiag": "",
[2025-05-25 16:33:42]     "pilotErrorCode": 0,
[2025-05-25 16:33:42]     "pilotErrorDiag": "",
[2025-05-25 16:33:42]  *** Listing of results directory ***
[2025-05-25 16:33:42] total 430072
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas    495897 May 25 05:44 pilot3.tar.gz
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas      5111 May 25 05:45 queuedata.json
[2025-05-25 16:33:42] -rwx------. 1 boincer umatlas     37140 May 25 05:47 runpilot2-wrapper.sh
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas       100 May 25 11:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 16:33:42] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 11:45 run_atlas
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas       105 May 25 11:45 job.xml
[2025-05-25 16:33:42] -rw-r--r--. 2 boincer umatlas 227407670 May 25 11:45 EVNT.44871834._001294.pool.root.1
[2025-05-25 16:33:42] -rw-r--r--. 2 boincer umatlas    508882 May 25 11:45 input.tar.gz
[2025-05-25 16:33:42] drwxrwx--x. 2 boincer umatlas      4096 May 25 11:45 shared
[2025-05-25 16:33:42] -rw-r--r--. 2 boincer umatlas     15093 May 25 11:45 start_atlas.sh
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas         0 May 25 11:45 boinc_lockfile
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas      2558 May 25 11:45 pandaJob.out
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas    990811 May 25 11:45 agis_schedconf.cvmfs.json
[2025-05-25 16:33:42] drwx------. 4 boincer umatlas      4096 May 25 11:45 pilot3
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas      6933 May 25 16:28 init_data.xml
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas 205646287 May 25 16:31 HITS.44871837._032449.pool.root.1
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas       530 May 25 16:31 boinc_task_state.xml
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas      1045 May 25 16:32 memory_monitor_summary.json
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas   1596740 May 25 16:32 agis_ddmendpoints.agis.ALL.json
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas    406711 May 25 16:32 log.44871837._032449.job.log.tgz.1
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas      7703 May 25 16:33 heartbeat.json
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas        95 May 25 16:33 pilot_heartbeat.json
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas      4353 May 25 16:33 pilotlog.txt
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas   1346420 May 25 16:33 log.44871837._032449.job.log.1
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas       357 May 25 16:33 output.list
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas       620 May 25 16:33 runtime_log
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas   1771520 May 25 16:33 result.tar.gz
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas      8655 May 25 16:33 runtime_log.err
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas       656 May 25 16:33 NqFNDmB8Md7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHsTKDmtQwGFm.diag
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas        28 May 25 16:33 wrapper_checkpoint.txt
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas      8192 May 25 16:33 boinc_mmap_file
[2025-05-25 16:33:42] -rw-r--r--. 1 boincer umatlas     20894 May 25 16:33 stderr.txt
[2025-05-25 16:33:42] HITS file was successfully produced:
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas 205646287 May 25 16:31 shared/HITS.pool.root.1
[2025-05-25 16:33:42]  *** Contents of shared directory: ***
[2025-05-25 16:33:42] total 425164
[2025-05-25 16:33:42] -rw-r--r--. 2 boincer umatlas 227407670 May 25 11:45 ATLAS.root_0
[2025-05-25 16:33:42] -rw-r--r--. 2 boincer umatlas    508882 May 25 11:45 input.tar.gz
[2025-05-25 16:33:42] -rw-r--r--. 2 boincer umatlas     15093 May 25 11:45 start_atlas.sh
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas 205646287 May 25 16:31 HITS.pool.root.1
[2025-05-25 16:33:42] -rw-------. 1 boincer umatlas   1771520 May 25 16:33 result.tar.gz
16:33:44 (2789149): run_atlas exited; CPU time 40765.443253
16:33:44 (2789149): called boinc_finish(0)

</stderr_txt>
]]>

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