Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:11:51 (2428721): wrapper (7.7.26015): starting
11:11:51 (2428721): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 11:11:51] Arguments: --nthreads 8
[2025-05-25 11:11:51] Threads: 8
[2025-05-25 11:11:51] Checking for CVMFS
[2025-05-25 11:11:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 11:11:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 11:11:52] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 11:11:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 11:11:52] 2.12.6.0 4868 23077 385144 146405 1 850 32155936 32935937 30213 16776704 0 196851360 99.671 172448871 21941 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 11:11:52] CVMFS is ok
[2025-05-25 11:11:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 11:11:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 11:11:52] Further information can be found at the LHC@home message board.
[2025-05-25 11:11:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 11:11:52] Checking for apptainer binary...
[2025-05-25 11:11:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 11:11:52] Running /usr/bin/apptainer --version
[2025-05-25 11:11:52] apptainer version 1.4.1-1.el9
[2025-05-25 11:11:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 11:11:52] c7-3-34.aglt2.org
[2025-05-25 11:11:52] apptainer works
[2025-05-25 11:11:52] Set ATHENA_PROC_NUMBER=8
[2025-05-25 11:11:52] Set ATHENA_CORE_NUMBER=8
[2025-05-25 11:11:52] Starting ATLAS job with PandaID=6665676348
[2025-05-25 11:11:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 15:27:26]  *** The last 200 lines of the pilot log: ***
[2025-05-25 15:27:26] 2025-05-25 19:27:05,493 | INFO     | monitor loop #912: job 0:6665676348 is in state 'finished'
[2025-05-25 15:27:26] 2025-05-25 19:27:05,494 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 15:27:26] 2025-05-25 19:27:08,001 | INFO     | monitor loop #913: job 0:6665676348 is in state 'finished'
[2025-05-25 15:27:26] 2025-05-25 19:27:08,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 15:27:26] 2025-05-25 19:27:10,507 | INFO     | monitor loop #914: job 0:6665676348 is in state 'finished'
[2025-05-25 15:27:26] 2025-05-25 19:27:10,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 15:27:26] 2025-05-25 19:27:10,778 [wrapper] supervise_pilot (15 min periods counter: 18)
[2025-05-25 15:27:26] 2025-05-25 19:27:11,446 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 15:27:26] 2025-05-25 19:27:11,446 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6665676348/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 15:27:26] 2025-05-25 19:27:11,449 | INFO     | extracted standard info from prmon json
[2025-05-25 15:27:26] 2025-05-25 19:27:11,449 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 15:27:26] 2025-05-25 19:27:11,449 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 15:27:26] 2025-05-25 19:27:11,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 15:27:26] 2025-05-25 19:27:11,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 15:27:26] 2025-05-25 19:27:11,456 | INFO     | fitting pss+swap vs Time
[2025-05-25 15:27:26] 2025-05-25 19:27:11,457 | INFO     | sum of square deviations: 4844987988.355965
[2025-05-25 15:27:26] 2025-05-25 19:27:11,459 | INFO     | sum of deviations: 2777219067.895981
[2025-05-25 15:27:26] 2025-05-25 19:27:11,459 | INFO     | mean x: 1748193562.524
[2025-05-25 15:27:26] 2025-05-25 19:27:11,459 | INFO     | mean y: 2095525.184
[2025-05-25 15:27:26] 2025-05-25 19:27:11,459 | INFO     | -- intersect: -999994987.2967398
[2025-05-25 15:27:26] 2025-05-25 19:27:11,459 | INFO     | intersect: -999994987.2967398
[2025-05-25 15:27:26] 2025-05-25 19:27:11,459 | INFO     | chi2: 1.4059626203703213
[2025-05-25 15:27:26] 2025-05-25 19:27:11,460 | INFO     | sum of square deviations: 4560063545.853085
[2025-05-25 15:27:26] 2025-05-25 19:27:11,462 | INFO     | sum of deviations: 10386137296.66531
[2025-05-25 15:27:26] 2025-05-25 19:27:11,462 | INFO     | mean x: 1748193410.0244899
[2025-05-25 15:27:26] 2025-05-25 19:27:11,462 | INFO     | mean y: 2099587.7224489795
[2025-05-25 15:27:26] 2025-05-25 19:27:11,462 | INFO     | -- intersect: -3979638077.787014
[2025-05-25 15:27:26] 2025-05-25 19:27:11,462 | INFO     | intersect: -3979638077.787014
[2025-05-25 15:27:26] 2025-05-25 19:27:11,462 | INFO     | chi2: 1.360349819296974
[2025-05-25 15:27:26] 2025-05-25 19:27:11,462 | INFO     | current chi2=1.360349819296974 (change=3.244239954354767 %)
[2025-05-25 15:27:26] 2025-05-25 19:27:11,462 | INFO     | right removable region: 244
[2025-05-25 15:27:26] 2025-05-25 19:27:11,462 | INFO     | sum of square deviations: 4560059885.853085
[2025-05-25 15:27:26] 2025-05-25 19:27:11,464 | INFO     | sum of deviations: -24200316575.706116
[2025-05-25 15:27:26] 2025-05-25 19:27:11,464 | INFO     | mean x: 1748193715.0244899
[2025-05-25 15:27:26] 2025-05-25 19:27:11,464 | INFO     | mean y: 2109795.951020408
[2025-05-25 15:27:26] 2025-05-25 19:27:11,464 | INFO     | -- intersect: 9279804036.437462
[2025-05-25 15:27:26] 2025-05-25 19:27:11,464 | INFO     | intersect: 9279804036.437462
[2025-05-25 15:27:26] 2025-05-25 19:27:11,464 | INFO     | chi2: 0.11484075638125897
[2025-05-25 15:27:26] 2025-05-25 19:27:11,464 | INFO     | current chi2=0.11484075638125897 (change=91.83187698468038 %)
[2025-05-25 15:27:26] 2025-05-25 19:27:11,465 | INFO     | sum of square deviations: 4286527345.8500013
[2025-05-25 15:27:26] 2025-05-25 19:27:11,466 | INFO     | sum of deviations: -25983805217.225014
[2025-05-25 15:27:26] 2025-05-25 19:27:11,466 | INFO     | mean x: 1748193867.525
[2025-05-25 15:27:26] 2025-05-25 19:27:11,466 | INFO     | mean y: 2110784.2875
[2025-05-25 15:27:26] 2025-05-25 19:27:11,466 | INFO     | -- intersect: 10599203785.384249
[2025-05-25 15:27:26] 2025-05-25 19:27:11,466 | INFO     | intersect: 10599203785.384249
[2025-05-25 15:27:26] 2025-05-25 19:27:11,466 | INFO     | chi2: 0.10476063272740045
[2025-05-25 15:27:26] 2025-05-25 19:27:11,467 | INFO     | current chi2=0.10476063272740045 (change=8.777479330067797 %)
[2025-05-25 15:27:26] 2025-05-25 19:27:11,467 | INFO     | left removable region: 20
[2025-05-25 15:27:26] 2025-05-25 19:27:11,467 | INFO     | sum of square deviations: 3485096901.8392735
[2025-05-25 15:27:26] 2025-05-25 19:27:11,468 | INFO     | sum of deviations: -17111915715.249996
[2025-05-25 15:27:26] 2025-05-25 19:27:11,468 | INFO     | mean x: 1748193989.5267856
[2025-05-25 15:27:26] 2025-05-25 19:27:11,468 | INFO     | mean y: 2115430.375
[2025-05-25 15:27:26] 2025-05-25 19:27:11,468 | INFO     | -- intersect: 8585793028.23498
[2025-05-25 15:27:26] 2025-05-25 19:27:11,468 | INFO     | intersect: 8585793028.23498
[2025-05-25 15:27:26] 2025-05-25 19:27:11,469 | INFO     | chi2: 0.059110174274642505
[2025-05-25 15:27:26] 2025-05-25 19:27:11,469 | INFO     | -- intersect: 8585793028.23498
[2025-05-25 15:27:26] 2025-05-25 19:27:11,469 | INFO     | current memory leak: -4.91 B/s (using 224 data points, chi2=0.06)
[2025-05-25 15:27:26] 2025-05-25 19:27:11,469 | INFO     | ..............................
[2025-05-25 15:27:26] 2025-05-25 19:27:11,469 | INFO     | . Timing measurements:
[2025-05-25 15:27:26] 2025-05-25 19:27:11,469 | INFO     | . get job = 0 s
[2025-05-25 15:27:26] 2025-05-25 19:27:11,469 | INFO     | . initial setup = 3 s
[2025-05-25 15:27:26] 2025-05-25 19:27:11,469 | INFO     | . payload setup = 10 s
[2025-05-25 15:27:26] 2025-05-25 19:27:11,470 | INFO     | . stage-in = 0 s
[2025-05-25 15:27:26] 2025-05-25 19:27:11,470 | INFO     | . payload execution = 15254 s
[2025-05-25 15:27:26] 2025-05-25 19:27:11,470 | INFO     | . stage-out = 2 s
[2025-05-25 15:27:26] 2025-05-25 19:27:11,470 | INFO     | . log creation = 0 s
[2025-05-25 15:27:26] 2025-05-25 19:27:11,470 | INFO     | ..............................
[2025-05-25 15:27:26] 2025-05-25 19:27:11,545 | INFO     | 
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | job summary report
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | --------------------------------------------------
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | PanDA job id: 6665676348
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | task id: 44871837
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | errors: (none)
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | pilot state: finished 
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | transexitcode: 0
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | exeerrorcode: 0
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | exeerrordiag: 
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | exitcode: 0
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | exitmsg: OK
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | cpuconsumptiontime: 39097 s
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | nevents: 400
[2025-05-25 15:27:26] 2025-05-25 19:27:11,546 | INFO     | neventsw: 0
[2025-05-25 15:27:26] 2025-05-25 19:27:11,547 | INFO     | pid: 2449547
[2025-05-25 15:27:26] 2025-05-25 19:27:11,547 | INFO     | pgrp: 2449547
[2025-05-25 15:27:26] 2025-05-25 19:27:11,547 | INFO     | corecount: 8
[2025-05-25 15:27:26] 2025-05-25 19:27:11,547 | INFO     | event service: False
[2025-05-25 15:27:26] 2025-05-25 19:27:11,547 | INFO     | sizes: {0: 2393567, 1: 2393766, 8: 2393972, 11: 2394000, 15268: 2424635, 15271: 2433576, 15273: 2433760, 15280: 2433930}
[2025-05-25 15:27:26] 2025-05-25 19:27:11,547 | INFO     | --------------------------------------------------
[2025-05-25 15:27:26] 2025-05-25 19:27:11,547 | INFO     | 
[2025-05-25 15:27:26] 2025-05-25 19:27:11,547 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-25 15:27:26] 2025-05-25 19:27:11,588 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,588 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,588 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,588 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | job 6665676348 has completed (purged errors)
[2025-05-25 15:27:26] 2025-05-25 19:27:11,589 | INFO     | overall cleanup function is called
[2025-05-25 15:27:26] 2025-05-25 19:27:12,598 | INFO     | --- collectZombieJob: --- 10, [2449547]
[2025-05-25 15:27:26] 2025-05-25 19:27:12,598 | INFO     | zombie collector waiting for pid 2449547
[2025-05-25 15:27:26] 2025-05-25 19:27:12,598 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 15:27:26] 2025-05-25 19:27:12,599 | INFO     | collected zombie processes
[2025-05-25 15:27:26] 2025-05-25 19:27:12,599 | INFO     | will attempt to kill all subprocesses of pid=2449547
[2025-05-25 15:27:26] 2025-05-25 19:27:13,585 | INFO     | process IDs to be killed: [2449547] (in reverse order)
[2025-05-25 15:27:26] 2025-05-25 19:27:13,778 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 15:27:26] 2025-05-25 19:27:13,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 15:27:26] 2025-05-25 19:27:13,812 | INFO     | did not find any defunct processes belonging to 2449547
[2025-05-25 15:27:26] 2025-05-25 19:27:13,834 | INFO     | did not find any defunct processes belonging to 2449547
[2025-05-25 15:27:26] 2025-05-25 19:27:13,834 | INFO     | ready for new job
[2025-05-25 15:27:26] 2025-05-25 19:27:13,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 15:27:26] 2025-05-25 19:27:13,839 | INFO     | **************************************
[2025-05-25 15:27:26] 2025-05-25 19:27:13,839 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 15:27:26] 2025-05-25 19:27:13,839 | INFO     | **************************************
[2025-05-25 15:27:26] 2025-05-25 19:27:13,839 | INFO     | 
[2025-05-25 15:27:26] 2025-05-25 19:27:13,844 | INFO     | architecture information:
[2025-05-25 15:27:26] 2025-05-25 19:27:13,845 | INFO     | executing command: cat /etc/os-release
[2025-05-25 15:27:26] 2025-05-25 19:27:13,862 | INFO     | cat /etc/os-release:
[2025-05-25 15:27:26] NAME="CentOS Linux"
[2025-05-25 15:27:26] VERSION="7 (Core)"
[2025-05-25 15:27:26] ID="centos"
[2025-05-25 15:27:26] ID_LIKE="rhel fedora"
[2025-05-25 15:27:26] VERSION_ID="7"
[2025-05-25 15:27:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 15:27:26] ANSI_COLOR="0;31"
[2025-05-25 15:27:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 15:27:26] HOME_URL="https://www.centos.org/"
[2025-05-25 15:27:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 15:27:26] 
[2025-05-25 15:27:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 15:27:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 15:27:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 15:27:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 15:27:26] 
[2025-05-25 15:27:26] 2025-05-25 19:27:13,862 | INFO     | **************************************
[2025-05-25 15:27:26] 2025-05-25 19:27:14,365 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-25 15:27:26] 2025-05-25 19:27:14,394 | INFO     | sufficient remaining disk space (73665609728 B)
[2025-05-25 15:27:26] 2025-05-25 19:27:14,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 15:27:26] 2025-05-25 19:27:14,395 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 15:27:26] 2025-05-25 19:27:14,395 | INFO     | update_server=False
[2025-05-25 15:27:26] 2025-05-25 19:27:14,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 15:27:26] 2025-05-25 19:27:14,398 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 15:27:26] 2025-05-25 19:27:14,398 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 15:27:26] 2025-05-25 19:27:14,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 15:27:26] 2025-05-25 19:27:14,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 15:27:26] 2025-05-25 19:27:14,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 15:27:26] 2025-05-25 19:27:14,403 | INFO     | aborting loop
[2025-05-25 15:27:26] 2025-05-25 19:27:14,584 | INFO     | all job control threads have been joined
[2025-05-25 15:27:26] 2025-05-25 19:27:14,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 15:27:26] 2025-05-25 19:27:14,979 | INFO     | all data control threads have been joined
[2025-05-25 15:27:26] 2025-05-25 19:27:15,065 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 15:27:26] 2025-05-25 19:27:15,108 | INFO     | all payload control threads have been joined
[2025-05-25 15:27:26] 2025-05-25 19:27:15,403 | INFO     | [job] retrieve thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:15,408 | INFO     | [job] job monitor thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:15,520 | INFO     | [data] copytool_in thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:15,590 | INFO     | [job] control thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:15,612 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:15,750 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:15,985 | INFO     | [data] control thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:16,087 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:16,114 | INFO     | [payload] control thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:16,172 | INFO     | [payload] validate_post thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:16,192 | INFO     | [payload] failed_post thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:16,522 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:16,551 | INFO     | [job] validate thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:16,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 15:27:26] 2025-05-25 19:27:16,696 | INFO     | [data] copytool_out thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:17,561 | INFO     | [job] queue monitor thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:19,073 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 15:27:26] 2025-05-25 19:27:20,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549062571840)>', '<ExcThread(monitor, started 140548576900864)>']
[2025-05-25 15:27:26] 2025-05-25 19:27:21,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 15:27:26] 2025-05-25 19:27:21,444 | INFO     | [monitor] control thread has ended
[2025-05-25 15:27:26] 2025-05-25 19:27:25,811 | INFO     | all workflow threads have been joined
[2025-05-25 15:27:26] 2025-05-25 19:27:25,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 15:27:26] 2025-05-25 19:27:25,812 | INFO     | traces error code: 0
[2025-05-25 15:27:26] 2025-05-25 19:27:25,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 15:27:26] 2025-05-25 19:27:26,000 [wrapper] ==== pilot stdout END ====
[2025-05-25 15:27:26] 2025-05-25 19:27:26,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 15:27:26] 2025-05-25 19:27:26,005 [wrapper] pilotpid: 2435249
[2025-05-25 15:27:26] 2025-05-25 19:27:26,007 [wrapper] Pilot exit status: 0
[2025-05-25 15:27:26] 2025-05-25 19:27:26,054 [wrapper] pandaids: 6665676348
[2025-05-25 15:27:26] 2025-05-25 19:27:26,170 [wrapper] cleanup supervisor_pilot 1362512 2435250
[2025-05-25 15:27:26] 2025-05-25 19:27:26,174 [wrapper] Test setup, not cleaning
[2025-05-25 15:27:26] 2025-05-25 19:27:26,177 [wrapper] apfmon messages muted
[2025-05-25 15:27:26] 2025-05-25 19:27:26,179 [wrapper] ==== wrapper stdout END ====
[2025-05-25 15:27:26] 2025-05-25 19:27:26,182 [wrapper] ==== wrapper stderr END ====
[2025-05-25 15:27:26]  *** Error codes and diagnostics ***
[2025-05-25 15:27:26]     "exeErrorCode": 0,
[2025-05-25 15:27:26]     "exeErrorDiag": "",
[2025-05-25 15:27:26]     "pilotErrorCode": 0,
[2025-05-25 15:27:26]     "pilotErrorDiag": "",
[2025-05-25 15:27:26]  *** Listing of results directory ***
[2025-05-25 15:27:26] total 417572
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas    495897 May 24 13:49 pilot3.tar.gz
[2025-05-25 15:27:26] -rwx------. 1 boincer umatlas     37140 May 24 14:25 runpilot2-wrapper.sh
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas      5111 May 24 14:25 queuedata.json
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas       100 May 25 11:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 15:27:26] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 11:11 run_atlas
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas       105 May 25 11:11 job.xml
[2025-05-25 15:27:26] -rw-r--r--. 2 boincer umatlas 222659402 May 25 11:11 EVNT.44871834._000870.pool.root.1
[2025-05-25 15:27:26] -rw-r--r--. 2 boincer umatlas     15093 May 25 11:11 start_atlas.sh
[2025-05-25 15:27:26] drwxrwx--x. 2 boincer umatlas      4096 May 25 11:11 shared
[2025-05-25 15:27:26] -rw-r--r--. 2 boincer umatlas    508873 May 25 11:11 input.tar.gz
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas         0 May 25 11:11 boinc_lockfile
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas      2557 May 25 11:11 pandaJob.out
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas    990811 May 25 11:12 agis_schedconf.cvmfs.json
[2025-05-25 15:27:26] drwx------. 4 boincer umatlas      4096 May 25 11:12 pilot3
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas      6933 May 25 15:18 init_data.xml
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas 197804854 May 25 15:26 HITS.44871837._021842.pool.root.1
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas       531 May 25 15:26 boinc_task_state.xml
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas        95 May 25 15:26 pilot_heartbeat.json
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas      1036 May 25 15:26 memory_monitor_summary.json
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas   1596740 May 25 15:27 agis_ddmendpoints.agis.ALL.json
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas    410292 May 25 15:27 log.44871837._021842.job.log.tgz.1
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas      7693 May 25 15:27 heartbeat.json
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas        28 May 25 15:27 wrapper_checkpoint.txt
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas      4476 May 25 15:27 pilotlog.txt
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas   1236574 May 25 15:27 log.44871837._021842.job.log.1
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas       357 May 25 15:27 output.list
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas       620 May 25 15:27 runtime_log
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas   1669120 May 25 15:27 result.tar.gz
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas      8192 May 25 15:27 boinc_mmap_file
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas      8655 May 25 15:27 runtime_log.err
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas       655 May 25 15:27 63OLDmVj8c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpESKDm3r21wn.diag
[2025-05-25 15:27:26] -rw-r--r--. 1 boincer umatlas     21134 May 25 15:27 stderr.txt
[2025-05-25 15:27:26] HITS file was successfully produced:
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas 197804854 May 25 15:26 shared/HITS.pool.root.1
[2025-05-25 15:27:26]  *** Contents of shared directory: ***
[2025-05-25 15:27:26] total 412768
[2025-05-25 15:27:26] -rw-r--r--. 2 boincer umatlas 222659402 May 25 11:11 ATLAS.root_0
[2025-05-25 15:27:26] -rw-r--r--. 2 boincer umatlas     15093 May 25 11:11 start_atlas.sh
[2025-05-25 15:27:26] -rw-r--r--. 2 boincer umatlas    508873 May 25 11:11 input.tar.gz
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas 197804854 May 25 15:26 HITS.pool.root.1
[2025-05-25 15:27:26] -rw-------. 1 boincer umatlas   1669120 May 25 15:27 result.tar.gz
15:27:27 (2428721): run_atlas exited; CPU time 39720.668046
15:27:27 (2428721): called boinc_finish(0)

</stderr_txt>
]]>

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