Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:42:35 (2744761): wrapper (7.7.26015): starting
11:42:35 (2744761): wrapper: running run_atlas (--nthreads 9)
[2025-05-25 11:42:35] Arguments: --nthreads 9
[2025-05-25 11:42:35] Threads: 9
[2025-05-25 11:42:35] Checking for CVMFS
[2025-05-25 11:42:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 11:42:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 11:42:36] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 11:42:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 11:42:37] 2.12.6.0 5047 17245 315500 146407 2 382 29975059 32935936 16474 16776704 1 41129181 99.592 51557127 23639 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 11:42:37] CVMFS is ok
[2025-05-25 11:42:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 11:42:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 11:42:37] Further information can be found at the LHC@home message board.
[2025-05-25 11:42:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 11:42:37] Checking for apptainer binary...
[2025-05-25 11:42:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 11:42:37] Running /usr/bin/apptainer --version
[2025-05-25 11:42:37] apptainer version 1.4.1-1.el9
[2025-05-25 11:42:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 11:42:37] c6-6-39-2.aglt2.org
[2025-05-25 11:42:37] apptainer works
[2025-05-25 11:42:38] Set ATHENA_PROC_NUMBER=9
[2025-05-25 11:42:38] Set ATHENA_CORE_NUMBER=9
[2025-05-25 11:42:38] Starting ATLAS job with PandaID=6665721594
[2025-05-25 11:42:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 15:38:56]  *** The last 200 lines of the pilot log: ***
[2025-05-25 15:38:56] 2025-05-25 19:38:37,814 | INFO     | extracted standard info from prmon json
[2025-05-25 15:38:56] 2025-05-25 19:38:37,815 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 15:38:56] 2025-05-25 19:38:37,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 15:38:56] 2025-05-25 19:38:37,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 15:38:56] 2025-05-25 19:38:37,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 15:38:56] 2025-05-25 19:38:37,823 | INFO     | fitting pss+swap vs Time
[2025-05-25 15:38:56] 2025-05-25 19:38:37,823 | INFO     | sum of square deviations: 3723884429.1965055
[2025-05-25 15:38:56] 2025-05-25 19:38:37,825 | INFO     | sum of deviations: -19053220322.358078
[2025-05-25 15:38:56] 2025-05-25 19:38:37,825 | INFO     | mean x: 1748194901.4847162
[2025-05-25 15:38:56] 2025-05-25 19:38:37,825 | INFO     | mean y: 2217256.1834061136
[2025-05-25 15:38:56] 2025-05-25 19:38:37,825 | INFO     | -- intersect: 8946840339.343462
[2025-05-25 15:38:56] 2025-05-25 19:38:37,825 | INFO     | intersect: 8946840339.343462
[2025-05-25 15:38:56] 2025-05-25 19:38:37,825 | INFO     | chi2: 2.728966131712404
[2025-05-25 15:38:56] 2025-05-25 19:38:37,826 | INFO     | sum of square deviations: 3485235162.8884025
[2025-05-25 15:38:56] 2025-05-25 19:38:37,831 | INFO     | sum of deviations: -3557842473.6473274
[2025-05-25 15:38:56] 2025-05-25 19:38:37,831 | INFO     | mean x: 1748194748.9776785
[2025-05-25 15:38:56] 2025-05-25 19:38:37,831 | INFO     | mean y: 2226993.870535714
[2025-05-25 15:38:56] 2025-05-25 19:38:37,831 | INFO     | -- intersect: 1786841586.4093435
[2025-05-25 15:38:56] 2025-05-25 19:38:37,831 | INFO     | intersect: 1786841586.4093435
[2025-05-25 15:38:56] 2025-05-25 19:38:37,832 | INFO     | chi2: 1.9315702162229627
[2025-05-25 15:38:56] 2025-05-25 19:38:37,832 | INFO     | current chi2=1.9315702162229627 (change=29.219707281199632 %)
[2025-05-25 15:38:56] 2025-05-25 19:38:37,832 | INFO     | sum of square deviations: 3256989930.4931397
[2025-05-25 15:38:56] 2025-05-25 19:38:37,833 | INFO     | sum of deviations: -4082543696.068501
[2025-05-25 15:38:56] 2025-05-25 19:38:37,833 | INFO     | mean x: 1748194596.4657533
[2025-05-25 15:38:56] 2025-05-25 19:38:37,833 | INFO     | mean y: 2226645.3242009133
[2025-05-25 15:38:56] 2025-05-25 19:38:37,833 | INFO     | -- intersect: 2193538556.5101395
[2025-05-25 15:38:56] 2025-05-25 19:38:37,834 | INFO     | intersect: 2193538556.5101395
[2025-05-25 15:38:56] 2025-05-25 19:38:37,834 | INFO     | chi2: 1.9292794393938504
[2025-05-25 15:38:56] 2025-05-25 19:38:37,834 | INFO     | current chi2=1.9292794393938504 (change=0.11859661170338977 %)
[2025-05-25 15:38:56] 2025-05-25 19:38:37,834 | INFO     | right removable region: 218
[2025-05-25 15:38:56] 2025-05-25 19:38:37,834 | INFO     | sum of square deviations: 3485222842.995554
[2025-05-25 15:38:56] 2025-05-25 19:38:37,838 | INFO     | sum of deviations: -52145049256.334816
[2025-05-25 15:38:56] 2025-05-25 19:38:37,838 | INFO     | mean x: 1748195053.9955356
[2025-05-25 15:38:56] 2025-05-25 19:38:37,838 | INFO     | mean y: 2238237.6651785714
[2025-05-25 15:38:56] 2025-05-25 19:38:37,838 | INFO     | -- intersect: 26158303805.60637
[2025-05-25 15:38:56] 2025-05-25 19:38:37,838 | INFO     | intersect: 26158303805.60637
[2025-05-25 15:38:56] 2025-05-25 19:38:37,838 | INFO     | chi2: 1.2549390875390327
[2025-05-25 15:38:56] 2025-05-25 19:38:37,838 | INFO     | current chi2=1.2549390875390327 (change=54.014120111063136 %)
[2025-05-25 15:38:56] 2025-05-25 19:38:37,839 | INFO     | sum of square deviations: 3256993598.748865
[2025-05-25 15:38:56] 2025-05-25 19:38:37,840 | INFO     | sum of deviations: -50065456785.47487
[2025-05-25 15:38:56] 2025-05-25 19:38:37,840 | INFO     | mean x: 1748195206.502283
[2025-05-25 15:38:56] 2025-05-25 19:38:37,840 | INFO     | mean y: 2236805.9497716897
[2025-05-25 15:38:56] 2025-05-25 19:38:37,840 | INFO     | -- intersect: 26874930567.870502
[2025-05-25 15:38:56] 2025-05-25 19:38:37,840 | INFO     | intersect: 26874930567.870502
[2025-05-25 15:38:56] 2025-05-25 19:38:37,844 | INFO     | chi2: 1.225823316828584
[2025-05-25 15:38:56] 2025-05-25 19:38:37,845 | INFO     | current chi2=1.225823316828584 (change=2.3200943376100875 %)
[2025-05-25 15:38:56] 2025-05-25 19:38:37,845 | INFO     | left removable region: 20
[2025-05-25 15:38:56] 2025-05-25 19:38:37,845 | INFO     | sum of square deviations: 2406920368.9949484
[2025-05-25 15:38:56] 2025-05-25 19:38:37,846 | INFO     | sum of deviations: -16662177658.79292
[2025-05-25 15:38:56] 2025-05-25 19:38:37,846 | INFO     | mean x: 1748195176.0050504
[2025-05-25 15:38:56] 2025-05-25 19:38:37,846 | INFO     | mean y: 2233936.792929293
[2025-05-25 15:38:56] 2025-05-25 19:38:37,846 | INFO     | -- intersect: 12104312169.23737
[2025-05-25 15:38:56] 2025-05-25 19:38:37,846 | INFO     | intersect: 12104312169.23737
[2025-05-25 15:38:56] 2025-05-25 19:38:37,847 | INFO     | chi2: 0.3077717304999357
[2025-05-25 15:38:56] 2025-05-25 19:38:37,847 | INFO     | -- intersect: 12104312169.23737
[2025-05-25 15:38:56] 2025-05-25 19:38:37,847 | INFO     | current memory leak: -6.92 B/s (using 198 data points, chi2=0.31)
[2025-05-25 15:38:56] 2025-05-25 19:38:37,847 | INFO     | ..............................
[2025-05-25 15:38:56] 2025-05-25 19:38:37,847 | INFO     | . Timing measurements:
[2025-05-25 15:38:56] 2025-05-25 19:38:37,848 | INFO     | . get job = 0 s
[2025-05-25 15:38:56] 2025-05-25 19:38:37,848 | INFO     | . initial setup = 5 s
[2025-05-25 15:38:56] 2025-05-25 19:38:37,848 | INFO     | . payload setup = 45 s
[2025-05-25 15:38:56] 2025-05-25 19:38:37,848 | INFO     | . stage-in = 0 s
[2025-05-25 15:38:56] 2025-05-25 19:38:37,848 | INFO     | . payload execution = 13968 s
[2025-05-25 15:38:56] 2025-05-25 19:38:37,848 | INFO     | . stage-out = 2 s
[2025-05-25 15:38:56] 2025-05-25 19:38:37,848 | INFO     | . log creation = 0 s
[2025-05-25 15:38:56] 2025-05-25 19:38:37,848 | INFO     | ..............................
[2025-05-25 15:38:56] 2025-05-25 19:38:37,975 | INFO     | 
[2025-05-25 15:38:56] 2025-05-25 19:38:37,976 | INFO     | job summary report
[2025-05-25 15:38:56] 2025-05-25 19:38:37,976 | INFO     | --------------------------------------------------
[2025-05-25 15:38:56] 2025-05-25 19:38:37,976 | INFO     | PanDA job id: 6665721594
[2025-05-25 15:38:56] 2025-05-25 19:38:37,976 | INFO     | task id: 44871837
[2025-05-25 15:38:56] 2025-05-25 19:38:37,976 | INFO     | errors: (none)
[2025-05-25 15:38:56] 2025-05-25 19:38:37,976 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 15:38:56] 2025-05-25 19:38:37,976 | INFO     | pilot state: finished 
[2025-05-25 15:38:56] 2025-05-25 19:38:37,976 | INFO     | transexitcode: 0
[2025-05-25 15:38:56] 2025-05-25 19:38:37,976 | INFO     | exeerrorcode: 0
[2025-05-25 15:38:56] 2025-05-25 19:38:37,976 | INFO     | exeerrordiag: 
[2025-05-25 15:38:56] 2025-05-25 19:38:37,976 | INFO     | exitcode: 0
[2025-05-25 15:38:56] 2025-05-25 19:38:37,976 | INFO     | exitmsg: OK
[2025-05-25 15:38:56] 2025-05-25 19:38:37,977 | INFO     | cpuconsumptiontime: 48160 s
[2025-05-25 15:38:56] 2025-05-25 19:38:37,977 | INFO     | nevents: 400
[2025-05-25 15:38:56] 2025-05-25 19:38:37,977 | INFO     | neventsw: 0
[2025-05-25 15:38:56] 2025-05-25 19:38:37,977 | INFO     | pid: 2767660
[2025-05-25 15:38:56] 2025-05-25 19:38:37,977 | INFO     | pgrp: 2767660
[2025-05-25 15:38:56] 2025-05-25 19:38:37,977 | INFO     | corecount: 9
[2025-05-25 15:38:56] 2025-05-25 19:38:37,978 | INFO     | event service: False
[2025-05-25 15:38:56] 2025-05-25 19:38:37,978 | INFO     | sizes: {0: 2393513, 1: 2393768, 12: 2393768, 23: 2393796, 29: 2394030, 34: 2394058, 14017: 2424263, 14018: 2424262, 14023: 2433259, 14024: 2433315, 14042: 2433485}
[2025-05-25 15:38:56] 2025-05-25 19:38:37,978 | INFO     | --------------------------------------------------
[2025-05-25 15:38:56] 2025-05-25 19:38:37,978 | INFO     | 
[2025-05-25 15:38:56] 2025-05-25 19:38:37,978 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-25 15:38:56] 2025-05-25 19:38:38,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,070 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,070 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,070 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,070 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,070 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,070 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,070 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | job 6665721594 has completed (purged errors)
[2025-05-25 15:38:56] 2025-05-25 19:38:38,071 | INFO     | overall cleanup function is called
[2025-05-25 15:38:56] 2025-05-25 19:38:39,134 | INFO     | --- collectZombieJob: --- 10, [2767660]
[2025-05-25 15:38:56] 2025-05-25 19:38:39,135 | INFO     | zombie collector waiting for pid 2767660
[2025-05-25 15:38:56] 2025-05-25 19:38:39,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 15:38:56] 2025-05-25 19:38:39,135 | INFO     | collected zombie processes
[2025-05-25 15:38:56] 2025-05-25 19:38:39,135 | INFO     | will attempt to kill all subprocesses of pid=2767660
[2025-05-25 15:38:56] 2025-05-25 19:38:39,678 | INFO     | process IDs to be killed: [2767660] (in reverse order)
[2025-05-25 15:38:56] 2025-05-25 19:38:39,914 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 15:38:56] 2025-05-25 19:38:39,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 15:38:56] 2025-05-25 19:38:39,928 | INFO     | did not find any defunct processes belonging to 2767660
[2025-05-25 15:38:56] 2025-05-25 19:38:39,943 | INFO     | did not find any defunct processes belonging to 2767660
[2025-05-25 15:38:56] 2025-05-25 19:38:39,943 | INFO     | ready for new job
[2025-05-25 15:38:56] 2025-05-25 19:38:39,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 15:38:56] 2025-05-25 19:38:39,945 | INFO     | **************************************
[2025-05-25 15:38:56] 2025-05-25 19:38:39,945 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 15:38:56] 2025-05-25 19:38:39,945 | INFO     | **************************************
[2025-05-25 15:38:56] 2025-05-25 19:38:39,945 | INFO     | 
[2025-05-25 15:38:56] 2025-05-25 19:38:39,963 | INFO     | architecture information:
[2025-05-25 15:38:56] 2025-05-25 19:38:39,967 | INFO     | executing command: cat /etc/os-release
[2025-05-25 15:38:56] 2025-05-25 19:38:40,084 | INFO     | cat /etc/os-release:
[2025-05-25 15:38:56] NAME="CentOS Linux"
[2025-05-25 15:38:56] VERSION="7 (Core)"
[2025-05-25 15:38:56] ID="centos"
[2025-05-25 15:38:56] ID_LIKE="rhel fedora"
[2025-05-25 15:38:56] VERSION_ID="7"
[2025-05-25 15:38:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 15:38:56] ANSI_COLOR="0;31"
[2025-05-25 15:38:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 15:38:56] HOME_URL="https://www.centos.org/"
[2025-05-25 15:38:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 15:38:56] 
[2025-05-25 15:38:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 15:38:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 15:38:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 15:38:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 15:38:56] 
[2025-05-25 15:38:56] 2025-05-25 19:38:40,084 | INFO     | **************************************
[2025-05-25 15:38:56] 2025-05-25 19:38:40,589 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-25 15:38:56] 2025-05-25 19:38:40,710 | INFO     | sufficient remaining disk space (75157733376 B)
[2025-05-25 15:38:56] 2025-05-25 19:38:40,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 15:38:56] 2025-05-25 19:38:40,711 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 15:38:56] 2025-05-25 19:38:40,711 | INFO     | update_server=False
[2025-05-25 15:38:56] 2025-05-25 19:38:40,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 15:38:56] 2025-05-25 19:38:40,720 | INFO     | all data control threads have been joined
[2025-05-25 15:38:56] 2025-05-25 19:38:40,922 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 15:38:56] 2025-05-25 19:38:40,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 15:38:56] 2025-05-25 19:38:40,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 15:38:56] 2025-05-25 19:38:41,020 | INFO     | all payload control threads have been joined
[2025-05-25 15:38:56] 2025-05-25 19:38:41,140 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 15:38:56] 2025-05-25 19:38:41,141 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 15:38:56] 2025-05-25 19:38:41,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 15:38:56] 2025-05-25 19:38:41,141 | INFO     | will abort loop
[2025-05-25 15:38:56] 2025-05-25 19:38:41,717 | INFO     | [job] retrieve thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:41,744 | INFO     | [data] control thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:41,794 | INFO     | [payload] failed_post thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:41,878 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:41,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 15:38:56] 2025-05-25 19:38:42,026 | INFO     | [payload] control thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:42,147 | INFO     | [job] job monitor thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:42,435 | INFO     | all job control threads have been joined
[2025-05-25 15:38:56] 2025-05-25 19:38:42,516 | INFO     | [payload] validate_post thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:42,614 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:42,624 | INFO     | [data] copytool_in thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:42,632 | INFO     | [job] validate thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:42,666 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:43,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 15:38:56] 2025-05-25 19:38:43,014 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:43,441 | INFO     | [job] control thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:43,992 | INFO     | [data] copytool_out thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:44,014 | INFO     | [job] queue monitor thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:44,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 15:38:56] 2025-05-25 19:38:48,210 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 15:38:56] 2025-05-25 19:38:49,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101047465792)>', '<ExcThread(monitor, started 140100390336256)>']
[2025-05-25 15:38:56] 2025-05-25 19:38:49,974 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 15:38:56] 2025-05-25 19:38:49,975 | INFO     | [monitor] control thread has ended
[2025-05-25 15:38:56] 2025-05-25 19:38:54,312 | INFO     | all workflow threads have been joined
[2025-05-25 15:38:56] 2025-05-25 19:38:54,316 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 15:38:56] 2025-05-25 19:38:54,317 | INFO     | traces error code: 0
[2025-05-25 15:38:56] 2025-05-25 19:38:54,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 15:38:56] 2025-05-25 19:38:54,981 [wrapper] ==== pilot stdout END ====
[2025-05-25 15:38:56] 2025-05-25 19:38:55,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 15:38:56] 2025-05-25 19:38:55,049 [wrapper] pilotpid: 2758450
[2025-05-25 15:38:56] 2025-05-25 19:38:55,070 [wrapper] Pilot exit status: 0
[2025-05-25 15:38:56] 2025-05-25 19:38:55,189 [wrapper] pandaids: 6665721594
[2025-05-25 15:38:56] 2025-05-25 19:38:55,486 [wrapper] cleanup supervisor_pilot 3784154 2758451
[2025-05-25 15:38:56] 2025-05-25 19:38:55,489 [wrapper] Test setup, not cleaning
[2025-05-25 15:38:56] 2025-05-25 19:38:55,497 [wrapper] apfmon messages muted
[2025-05-25 15:38:56] 2025-05-25 19:38:55,500 [wrapper] ==== wrapper stdout END ====
[2025-05-25 15:38:56] 2025-05-25 19:38:55,534 [wrapper] ==== wrapper stderr END ====
[2025-05-25 15:38:56]  *** Error codes and diagnostics ***
[2025-05-25 15:38:56]     "exeErrorCode": 0,
[2025-05-25 15:38:56]     "exeErrorDiag": "",
[2025-05-25 15:38:56]     "pilotErrorCode": 0,
[2025-05-25 15:38:56]     "pilotErrorDiag": "",
[2025-05-25 15:38:56]  *** Listing of results directory ***
[2025-05-25 15:38:56] total 409764
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas    495897 May 25 04:07 pilot3.tar.gz
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas      5111 May 25 04:20 queuedata.json
[2025-05-25 15:38:56] -rwx------. 1 boincer umatlas     37140 May 25 04:22 runpilot2-wrapper.sh
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas       100 May 25 11:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 15:38:56] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 11:42 run_atlas
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas       105 May 25 11:42 job.xml
[2025-05-25 15:38:56] -rw-r--r--. 2 boincer umatlas 223278531 May 25 11:42 EVNT.44871834._001263.pool.root.1
[2025-05-25 15:38:56] -rw-r--r--. 2 boincer umatlas     15093 May 25 11:42 start_atlas.sh
[2025-05-25 15:38:56] drwxrwx--x. 2 boincer umatlas      4096 May 25 11:42 shared
[2025-05-25 15:38:56] -rw-r--r--. 2 boincer umatlas    508880 May 25 11:42 input.tar.gz
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas         0 May 25 11:42 boinc_lockfile
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas      2558 May 25 11:42 pandaJob.out
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas    990811 May 25 11:43 agis_schedconf.cvmfs.json
[2025-05-25 15:38:56] drwx------. 4 boincer umatlas      4096 May 25 11:43 pilot3
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas 189373652 May 25 15:37 HITS.44871837._031677.pool.root.1
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas       530 May 25 15:37 boinc_task_state.xml
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas      6841 May 25 15:38 init_data.xml
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas      1045 May 25 15:38 memory_monitor_summary.json
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas        95 May 25 15:38 pilot_heartbeat.json
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas   1596740 May 25 15:38 agis_ddmendpoints.agis.ALL.json
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas    397944 May 25 15:38 log.44871837._031677.job.log.tgz.1
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas      7740 May 25 15:38 heartbeat.json
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas      8192 May 25 15:38 boinc_mmap_file
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas        28 May 25 15:38 wrapper_checkpoint.txt
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas      4539 May 25 15:38 pilotlog.txt
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas   1159923 May 25 15:38 log.44871837._031677.job.log.1
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas       357 May 25 15:38 output.list
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas       620 May 25 15:38 runtime_log
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas   1576960 May 25 15:38 result.tar.gz
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas      8665 May 25 15:38 runtime_log.err
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas       657 May 25 15:38 2pFKDmvnLd7n9Rq4apOajLDm4fhM0noT9bVof3QYDm29NKDmUXHIgm.diag
[2025-05-25 15:38:56] -rw-r--r--. 1 boincer umatlas     20673 May 25 15:38 stderr.txt
[2025-05-25 15:38:56] HITS file was successfully produced:
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas 189373652 May 25 15:37 shared/HITS.pool.root.1
[2025-05-25 15:38:56]  *** Contents of shared directory: ***
[2025-05-25 15:38:56] total 405044
[2025-05-25 15:38:56] -rw-r--r--. 2 boincer umatlas 223278531 May 25 11:42 ATLAS.root_0
[2025-05-25 15:38:56] -rw-r--r--. 2 boincer umatlas     15093 May 25 11:42 start_atlas.sh
[2025-05-25 15:38:56] -rw-r--r--. 2 boincer umatlas    508880 May 25 11:42 input.tar.gz
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas 189373652 May 25 15:37 HITS.pool.root.1
[2025-05-25 15:38:56] -rw-------. 1 boincer umatlas   1576960 May 25 15:38 result.tar.gz
15:38:57 (2744761): run_atlas exited; CPU time 48559.674098
15:38:57 (2744761): called boinc_finish(0)

</stderr_txt>
]]>

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