Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:13:28 (1406590): wrapper (7.7.26015): starting
07:13:28 (1406590): wrapper: running run_atlas (--nthreads 12)
[2025-05-25 07:13:28] Arguments: --nthreads 12
[2025-05-25 07:13:28] Threads: 12
[2025-05-25 07:13:28] Checking for CVMFS
[2025-05-25 07:13:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 07:13:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 07:13:29] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 07:13:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 07:13:30] 2.11.5.0 2344231 9360 244280 146404 1 230 31024142 45568000 15223 130560 0 87527068 99.754 67944001 26986 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-25 07:13:30] CVMFS is ok
[2025-05-25 07:13:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 07:13:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 07:13:30] Further information can be found at the LHC@home message board.
[2025-05-25 07:13:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 07:13:30] Checking for apptainer binary...
[2025-05-25 07:13:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 07:13:30] Running /usr/bin/apptainer --version
[2025-05-25 07:13:30] apptainer version 1.4.0-1.el9
[2025-05-25 07:13:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 07:13:30] wns0053.triumf.lcg
[2025-05-25 07:13:30] apptainer works
[2025-05-25 07:13:30] Set ATHENA_PROC_NUMBER=12
[2025-05-25 07:13:30] Set ATHENA_CORE_NUMBER=12
[2025-05-25 07:13:30] Starting ATLAS job with PandaID=6665726528
[2025-05-25 07:13:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 07:17:24]  *** The last 200 lines of the pilot log: ***
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | WARNING  | found no stored workdir sizes
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | INFO     | will not add max space = 0 B to job metrics
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | WARNING  | wrong length of table data, x=[1748182480.0], y=[1667.0] (must be same and length>=4)
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | ..............................
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . Timing measurements:
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . get job = 0 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . initial setup = 3 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . payload setup = 13 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . stage-in = 0 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . payload execution = 26 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . stage-out = 1 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . log creation = 0 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | ..............................
[2025-05-25 07:17:24] 2025-05-25 14:17:07,711 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-25 07:17:24] 2025-05-25 14:17:07,711 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665726528/pilotlog.txt
[2025-05-25 07:17:24] 2025-05-25 14:17:07,772 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-25 07:17:24] - Log from pilotlog.txt -
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | INFO     | extracted standard info from prmon json
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | WARNING  | found no stored workdir sizes
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | INFO     | will not add max space = 0 B to job metrics
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | WARNING  | wrong length of table data, x=[1748182480.0], y=[1667.0] (must be same and length>=4)
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | ..............................
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . Timing measurements:
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . get job = 0 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . initial setup = 3 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . payload setup = 13 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . stage-in = 0 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . payload execution = 26 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . stage-out = 1 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . log creation = 0 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | ..............................
[2025-05-25 07:17:24] 2025-05-25 14:17:07,711 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-25 07:17:24] 2025-05-25 14:17:07,711 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665726528/pilotlog.txt
[2025-05-25 07:17:24] 2025-05-25 14:17:07,772 | WARNING  | 
[2025-05-25 07:17:24] [begin log extracts]
[2025-05-25 07:17:24] - Log from pilotlog.txt -
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | INFO     | extracted standard info from prmon json
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | WARNING  | found no stored workdir sizes
[2025-05-25 07:17:24] 2025-05-25 14:17:07,668 | INFO     | will not add max space = 0 B to job metrics
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | WARNING  | wrong length of table data, x=[1748182480.0], y=[1667.0] (must be same and length>=4)
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | ..............................
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . Timing measurements:
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . get job = 0 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . initial setup = 3 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . payload setup = 13 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . stage-in = 0 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . payload execution = 26 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . stage-out = 1 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | . log creation = 0 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,669 | INFO     | ..............................
[2025-05-25 07:17:24] 2025-05-25 14:17:07,711 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-25 07:17:24] 2025-05-25 14:17:07,711 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665726528/pilotlog.txt
[2025-05-25 07:17:24] [end log extracts]
[2025-05-25 07:17:24] 2025-05-25 14:17:07,772 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-25 07:17:24] 2025-05-25 14:17:07,773 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | 
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | job summary report
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | --------------------------------------------------
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | PanDA job id: 6665726528
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | task id: 44871837
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-25 07:14:54,324 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | pilot state: failed 
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | transexitcode: 65
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | exeerrorcode: 65
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | exitcode: 65
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | cpuconsumptiontime: 14 s
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | nevents: 0
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | neventsw: 0
[2025-05-25 07:17:24] 2025-05-25 14:17:07,993 | INFO     | pid: 1418382
[2025-05-25 07:17:24] 2025-05-25 14:17:07,994 | INFO     | pgrp: 1418382
[2025-05-25 07:17:24] 2025-05-25 14:17:07,994 | INFO     | corecount: 12
[2025-05-25 07:17:24] 2025-05-25 14:17:07,994 | INFO     | event service: False
[2025-05-25 07:17:24] 2025-05-25 14:17:07,994 | INFO     | sizes: {0: 2393560, 1: 2393759, 9: 2393965, 12: 2393993, 43: 2417149, 44: 2417125, 45: 2421544, 168: 2421658}
[2025-05-25 07:17:24] 2025-05-25 14:17:07,994 | INFO     | --------------------------------------------------
[2025-05-25 07:17:24] 2025-05-25 14:17:07,994 | INFO     | 
[2025-05-25 07:17:24] 2025-05-25 14:17:07,994 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-25 07:17:24] 2025-05-25 14:17:08,096 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,096 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,096 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,096 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,096 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,096 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | job 6665726528 has completed (purged errors)
[2025-05-25 07:17:24] 2025-05-25 14:17:08,097 | INFO     | overall cleanup function is called
[2025-05-25 07:17:24] 2025-05-25 14:17:09,104 | INFO     | --- collectZombieJob: --- 10, [1418382]
[2025-05-25 07:17:24] 2025-05-25 14:17:09,104 | INFO     | zombie collector waiting for pid 1418382
[2025-05-25 07:17:24] 2025-05-25 14:17:09,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 07:17:24] 2025-05-25 14:17:09,104 | INFO     | collected zombie processes
[2025-05-25 07:17:24] 2025-05-25 14:17:09,104 | INFO     | will attempt to kill all subprocesses of pid=1418382
[2025-05-25 07:17:24] 2025-05-25 14:17:09,567 | INFO     | process IDs to be killed: [1418382] (in reverse order)
[2025-05-25 07:17:24] 2025-05-25 14:17:09,783 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 07:17:24] 2025-05-25 14:17:09,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 07:17:24] 2025-05-25 14:17:09,808 | INFO     | did not find any defunct processes belonging to 1418382
[2025-05-25 07:17:24] 2025-05-25 14:17:09,826 | INFO     | did not find any defunct processes belonging to 1418382
[2025-05-25 07:17:24] 2025-05-25 14:17:09,826 | INFO     | ready for new job
[2025-05-25 07:17:24] 2025-05-25 14:17:09,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 07:17:24] 2025-05-25 14:17:09,827 | INFO     | **************************************
[2025-05-25 07:17:24] 2025-05-25 14:17:09,827 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 07:17:24] 2025-05-25 14:17:09,827 | INFO     | **************************************
[2025-05-25 07:17:24] 2025-05-25 14:17:09,827 | INFO     | 
[2025-05-25 07:17:24] 2025-05-25 14:17:09,829 | INFO     | architecture information:
[2025-05-25 07:17:24] 2025-05-25 14:17:09,829 | INFO     | executing command: cat /etc/os-release
[2025-05-25 07:17:24] 2025-05-25 14:17:09,843 | INFO     | cat /etc/os-release:
[2025-05-25 07:17:24] NAME="CentOS Linux"
[2025-05-25 07:17:24] VERSION="7 (Core)"
[2025-05-25 07:17:24] ID="centos"
[2025-05-25 07:17:24] ID_LIKE="rhel fedora"
[2025-05-25 07:17:24] VERSION_ID="7"
[2025-05-25 07:17:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 07:17:24] ANSI_COLOR="0;31"
[2025-05-25 07:17:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 07:17:24] HOME_URL="https://www.centos.org/"
[2025-05-25 07:17:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 07:17:24] 
[2025-05-25 07:17:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 07:17:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 07:17:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 07:17:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 07:17:24] 
[2025-05-25 07:17:24] 2025-05-25 14:17:09,843 | INFO     | **************************************
[2025-05-25 07:17:24] 2025-05-25 14:17:10,346 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-25 07:17:24] 2025-05-25 14:17:10,372 | INFO     | sufficient remaining disk space (2204618457088 B)
[2025-05-25 07:17:24] 2025-05-25 14:17:10,372 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 07:17:24] 2025-05-25 14:17:10,372 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 07:17:24] 2025-05-25 14:17:10,372 | INFO     | update_server=False
[2025-05-25 07:17:24] 2025-05-25 14:17:10,372 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 07:17:24] 2025-05-25 14:17:10,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 07:17:24] 2025-05-25 14:17:10,373 | INFO     | aborting loop
[2025-05-25 07:17:24] 2025-05-25 14:17:10,373 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 07:17:24] 2025-05-25 14:17:10,373 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 07:17:24] 2025-05-25 14:17:10,373 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 07:17:24] 2025-05-25 14:17:10,373 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 07:17:24] 2025-05-25 14:17:10,965 | INFO     | all data control threads have been joined
[2025-05-25 07:17:24] 2025-05-25 14:17:10,986 | INFO     | all payload control threads have been joined
[2025-05-25 07:17:24] 2025-05-25 14:17:11,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 07:17:24] 2025-05-25 14:17:11,378 | INFO     | [job] retrieve thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:11,378 | INFO     | [job] job monitor thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:11,886 | INFO     | all job control threads have been joined
[2025-05-25 07:17:24] 2025-05-25 14:17:11,971 | INFO     | [data] control thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:11,992 | INFO     | [payload] control thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:12,149 | INFO     | [payload] failed_post thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:12,149 | INFO     | [payload] validate_post thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:12,226 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:12,261 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:12,495 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:12,529 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:12,573 | INFO     | [job] validate thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:12,751 | INFO     | [data] copytool_in thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:12,892 | INFO     | [job] control thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:12,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 07:17:24] 2025-05-25 14:17:13,280 | INFO     | [data] copytool_out thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:13,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 07:17:24] 2025-05-25 14:17:13,903 | INFO     | [job] queue monitor thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:17,317 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 07:17:24] 2025-05-25 14:17:18,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139830300968768)>', '<ExcThread(monitor, started 139829622855424)>']
[2025-05-25 07:17:24] 2025-05-25 14:17:19,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 07:17:24] 2025-05-25 14:17:19,426 | INFO     | [monitor] control thread has ended
[2025-05-25 07:17:24] 2025-05-25 14:17:23,890 | INFO     | all workflow threads have been joined
[2025-05-25 07:17:24] 2025-05-25 14:17:23,890 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 07:17:24] 2025-05-25 14:17:23,890 | INFO     | traces error code: 0
[2025-05-25 07:17:24] 2025-05-25 14:17:23,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 07:17:24] 2025-05-25 14:17:24,362 [wrapper] ==== pilot stdout END ====
[2025-05-25 07:17:24] 2025-05-25 14:17:24,367 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 07:17:24] 2025-05-25 14:17:24,369 [wrapper] pilotpid: 1410161
[2025-05-25 07:17:24] 2025-05-25 14:17:24,390 [wrapper] Pilot exit status: 0
[2025-05-25 07:17:24] 2025-05-25 14:17:24,475 [wrapper] pandaids: 6665726528
[2025-05-25 07:17:24] 2025-05-25 14:17:24,547 [wrapper] cleanup supervisor_pilot 1410167 1410162
[2025-05-25 07:17:24] 2025-05-25 14:17:24,555 [wrapper] Test setup, not cleaning
[2025-05-25 07:17:24] 2025-05-25 14:17:24,566 [wrapper] apfmon messages muted
[2025-05-25 07:17:24] 2025-05-25 14:17:24,574 [wrapper] ==== wrapper stdout END ====
[2025-05-25 07:17:24] 2025-05-25 14:17:24,575 [wrapper] ==== wrapper stderr END ====
[2025-05-25 07:17:24]  *** Error codes and diagnostics ***
[2025-05-25 07:17:24]     "exeErrorCode": 65,
[2025-05-25 07:17:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-25 07:17:24]     "pilotErrorCode": 1305,
[2025-05-25 07:17:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-25 07:17:24]  *** Listing of results directory ***
[2025-05-25 07:17:24] total 221764
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc    495897 May 25 03:45 pilot3.tar.gz
[2025-05-25 07:17:24] -rwx------. 1 boinc boinc     37140 May 25 04:19 runpilot2-wrapper.sh
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc      5111 May 25 04:19 queuedata.json
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc       100 May 25 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 07:17:24] -rwxr-xr-x. 1 boinc boinc      7986 May 25 07:13 run_atlas
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc       105 May 25 07:13 job.xml
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc      6601 May 25 07:13 init_data.xml
[2025-05-25 07:17:24] -rw-r--r--. 2 boinc boinc 223063322 May 25 07:13 EVNT.44871834._001343.pool.root.1
[2025-05-25 07:17:24] -rw-r--r--. 2 boinc boinc     15093 May 25 07:13 start_atlas.sh
[2025-05-25 07:17:24] drwxrwx--x. 2 boinc boinc      4096 May 25 07:13 shared
[2025-05-25 07:17:24] -rw-r--r--. 2 boinc boinc    508875 May 25 07:13 input.tar.gz
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc         0 May 25 07:13 boinc_lockfile
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc      2555 May 25 07:13 pandaJob.out
[2025-05-25 07:17:24] -rw-------. 1 boinc boinc    990811 May 25 07:13 agis_schedconf.cvmfs.json
[2025-05-25 07:17:24] -rw-------. 1 boinc boinc   1596740 May 25 07:13 agis_ddmendpoints.agis.ALL.json
[2025-05-25 07:17:24] drwx------. 4 boinc boinc      4096 May 25 07:13 pilot3
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc       522 May 25 07:14 boinc_task_state.xml
[2025-05-25 07:17:24] -rw-------. 1 boinc boinc       968 May 25 07:14 memory_monitor_summary.json
[2025-05-25 07:17:24] -rw-------. 1 boinc boinc     20605 May 25 07:15 log.44871837._033670.job.log.tgz.1
[2025-05-25 07:17:24] -rw-------. 1 boinc boinc        95 May 25 07:16 pilot_heartbeat.json
[2025-05-25 07:17:24] -rw-------. 1 boinc boinc      8335 May 25 07:17 heartbeat.json
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc      8192 May 25 07:17 boinc_mmap_file
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc        22 May 25 07:17 wrapper_checkpoint.txt
[2025-05-25 07:17:24] -rw-------. 1 boinc boinc      4475 May 25 07:17 pilotlog.txt
[2025-05-25 07:17:24] -rw-------. 1 boinc boinc     75330 May 25 07:17 log.44871837._033670.job.log.1
[2025-05-25 07:17:24] -rw-------. 1 boinc boinc       188 May 25 07:17 output.list
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc       620 May 25 07:17 runtime_log
[2025-05-25 07:17:24] -rw-------. 1 boinc boinc    112640 May 25 07:17 result.tar.gz
[2025-05-25 07:17:24] -rw-------. 1 boinc boinc       645 May 25 07:17 vj5NDmXZOd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmm1TKDm1N4Oxn.diag
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc      8484 May 25 07:17 runtime_log.err
[2025-05-25 07:17:24] -rw-r--r--. 1 boinc boinc     21497 May 25 07:17 stderr.txt
[2025-05-25 07:17:24] No HITS result produced
[2025-05-25 07:17:24]  *** Contents of shared directory: ***
[2025-05-25 07:17:24] total 218468
[2025-05-25 07:17:24] -rw-r--r--. 2 boinc boinc 223063322 May 25 07:13 ATLAS.root_0
[2025-05-25 07:17:24] -rw-r--r--. 2 boinc boinc     15093 May 25 07:13 start_atlas.sh
[2025-05-25 07:17:24] -rw-r--r--. 2 boinc boinc    508875 May 25 07:13 input.tar.gz
[2025-05-25 07:17:24] -rw-------. 1 boinc boinc    112640 May 25 07:17 result.tar.gz
07:17:26 (1406590): run_atlas exited; CPU time 21.079055
07:17:26 (1406590): called boinc_finish(0)

</stderr_txt>
]]>

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