Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:13 (18571): wrapper (7.7.26015): starting
18:33:13 (18571): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 18:33:13] Arguments: --nthreads 8
[2025-05-25 18:33:13] Threads: 8
[2025-05-25 18:33:13] Checking for CVMFS
[2025-05-25 18:33:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 18:33:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 18:33:15] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 18:33:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 18:33:16] 2.11.2.0 22299 19053 91296 146408 1 129 19318591 25165825 2665 130560 0 11063032 99.697 13903052 1775 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-25 18:33:16] CVMFS is ok
[2025-05-25 18:33:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 18:33:16] Checking for apptainer binary...
[2025-05-25 18:33:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 18:33:16] Running /usr/bin/apptainer --version
[2025-05-25 18:33:16] apptainer version 1.3.2-1.el7
[2025-05-25 18:33:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 19:00:20] cg-vwn422.simple-grid.lan
[2025-05-25 19:00:20] apptainer works
[2025-05-25 19:00:20] Set ATHENA_PROC_NUMBER=8
[2025-05-25 19:00:20] Set ATHENA_CORE_NUMBER=8
[2025-05-25 19:00:20] Starting ATLAS job with PandaID=6665721052
[2025-05-25 19:00:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 00:41:33]  *** The last 200 lines of the pilot log: ***
[2025-05-26 00:41:33] 2025-05-25 22:15:19,243 | INFO     | extracted standard info from prmon json
[2025-05-26 00:41:33] 2025-05-25 22:15:19,244 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 00:41:33] 2025-05-25 22:15:19,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 00:41:33] 2025-05-25 22:15:19,262 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 00:41:33] 2025-05-25 22:15:19,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 00:41:33] 2025-05-25 22:15:19,268 | INFO     | fitting pss+swap vs Time
[2025-05-26 00:41:33] 2025-05-25 22:15:19,269 | INFO     | sum of square deviations: 8711530780.0
[2025-05-26 00:41:33] 2025-05-25 22:15:19,272 | INFO     | sum of deviations: 49948755629.5
[2025-05-26 00:41:33] 2025-05-25 22:15:19,272 | INFO     | mean x: 1748201943.5
[2025-05-26 00:41:33] 2025-05-25 22:15:19,272 | INFO     | mean y: 2475144.1940789474
[2025-05-26 00:41:33] 2025-05-25 22:15:19,272 | INFO     | -- intersect: -10021080287.346102
[2025-05-26 00:41:33] 2025-05-25 22:15:19,272 | INFO     | intersect: -10021080287.346102
[2025-05-26 00:41:33] 2025-05-25 22:15:19,273 | INFO     | chi2: 2.1955489074906938
[2025-05-26 00:41:33] 2025-05-25 22:15:19,273 | INFO     | sum of square deviations: 8288713550.0
[2025-05-26 00:41:33] 2025-05-25 22:15:19,276 | INFO     | sum of deviations: 68919600170.99998
[2025-05-26 00:41:33] 2025-05-25 22:15:19,276 | INFO     | mean x: 1748201791.0
[2025-05-26 00:41:33] 2025-05-25 22:15:19,276 | INFO     | mean y: 2481889.3076923075
[2025-05-26 00:41:33] 2025-05-25 22:15:19,277 | INFO     | -- intersect: -14533593911.49569
[2025-05-26 00:41:33] 2025-05-25 22:15:19,277 | INFO     | intersect: -14533593911.49569
[2025-05-26 00:41:33] 2025-05-25 22:15:19,277 | INFO     | chi2: 1.4191368953120553
[2025-05-26 00:41:33] 2025-05-25 22:15:19,277 | INFO     | current chi2=1.4191368953120553 (change=35.36300236946233 %)
[2025-05-26 00:41:33] 2025-05-25 22:15:19,278 | INFO     | sum of square deviations: 7879803557.5
[2025-05-26 00:41:33] 2025-05-25 22:15:19,281 | INFO     | sum of deviations: 67236096459.5
[2025-05-26 00:41:33] 2025-05-25 22:15:19,281 | INFO     | mean x: 1748201638.5
[2025-05-26 00:41:33] 2025-05-25 22:15:19,281 | INFO     | mean y: 2481261.241496599
[2025-05-26 00:41:33] 2025-05-25 22:15:19,281 | INFO     | -- intersect: -14914420300.976408
[2025-05-26 00:41:33] 2025-05-25 22:15:19,282 | INFO     | intersect: -14914420300.976408
[2025-05-26 00:41:33] 2025-05-25 22:15:19,282 | INFO     | chi2: 1.4193125488771732
[2025-05-26 00:41:33] 2025-05-25 22:15:19,282 | INFO     | current chi2=1.4193125488771732 (change=-0.012377492664597 %)
[2025-05-26 00:41:33] 2025-05-25 22:15:19,282 | INFO     | right removable region: 293
[2025-05-26 00:41:33] 2025-05-25 22:15:19,283 | INFO     | sum of square deviations: 8288713550.0
[2025-05-26 00:41:33] 2025-05-25 22:15:19,286 | INFO     | sum of deviations: 4413330052.999996
[2025-05-26 00:41:33] 2025-05-25 22:15:19,286 | INFO     | mean x: 1748202096.0
[2025-05-26 00:41:33] 2025-05-25 22:15:19,287 | INFO     | mean y: 2491443.1705685616
[2025-05-26 00:41:33] 2025-05-25 22:15:19,287 | INFO     | -- intersect: -928339716.8704711
[2025-05-26 00:41:33] 2025-05-25 22:15:19,287 | INFO     | intersect: -928339716.8704711
[2025-05-26 00:41:33] 2025-05-25 22:15:19,287 | INFO     | chi2: 0.8032424542212449
[2025-05-26 00:41:33] 2025-05-25 22:15:19,287 | INFO     | current chi2=0.8032424542212449 (change=63.41495962668964 %)
[2025-05-26 00:41:33] 2025-05-25 22:15:19,288 | INFO     | sum of square deviations: 7879803557.5
[2025-05-26 00:41:33] 2025-05-25 22:15:19,291 | INFO     | sum of deviations: 3794202684.0
[2025-05-26 00:41:33] 2025-05-25 22:15:19,291 | INFO     | mean x: 1748202248.5
[2025-05-26 00:41:33] 2025-05-25 22:15:19,291 | INFO     | mean y: 2491661.7346938774
[2025-05-26 00:41:33] 2025-05-25 22:15:19,291 | INFO     | -- intersect: -839284864.1686976
[2025-05-26 00:41:33] 2025-05-25 22:15:19,291 | INFO     | intersect: -839284864.1686976
[2025-05-26 00:41:33] 2025-05-25 22:15:19,292 | INFO     | chi2: 0.7944446222159077
[2025-05-26 00:41:33] 2025-05-25 22:15:19,292 | INFO     | current chi2=0.7944446222159077 (change=1.0952897172083305 %)
[2025-05-26 00:41:33] 2025-05-25 22:15:19,292 | INFO     | left removable region: 20
[2025-05-26 00:41:33] 2025-05-25 22:15:19,292 | INFO     | sum of square deviations: 6309000152.0
[2025-05-26 00:41:33] 2025-05-25 22:15:19,295 | INFO     | sum of deviations: 15994319255.000004
[2025-05-26 00:41:33] 2025-05-25 22:15:19,295 | INFO     | mean x: 1748202218.0
[2025-05-26 00:41:33] 2025-05-25 22:15:19,295 | INFO     | mean y: 2500967.6263736263
[2025-05-26 00:41:33] 2025-05-25 22:15:19,295 | INFO     | -- intersect: -4429469823.835278
[2025-05-26 00:41:33] 2025-05-25 22:15:19,295 | INFO     | intersect: -4429469823.835278
[2025-05-26 00:41:33] 2025-05-25 22:15:19,296 | INFO     | chi2: 0.0012914763601846457
[2025-05-26 00:41:33] 2025-05-25 22:15:19,296 | INFO     | -- intersect: -4429469823.835278
[2025-05-26 00:41:33] 2025-05-25 22:15:19,296 | INFO     | current memory leak: 2.54 B/s (using 273 data points, chi2=0.00)
[2025-05-26 00:41:33] 2025-05-25 22:15:19,297 | INFO     | ..............................
[2025-05-26 00:41:33] 2025-05-25 22:15:19,297 | INFO     | . Timing measurements:
[2025-05-26 00:41:33] 2025-05-25 22:15:19,297 | INFO     | . get job = 0 s
[2025-05-26 00:41:33] 2025-05-25 22:15:19,297 | INFO     | . initial setup = 8 s
[2025-05-26 00:41:33] 2025-05-25 22:15:19,297 | INFO     | . payload setup = 14 s
[2025-05-26 00:41:33] 2025-05-25 22:15:19,297 | INFO     | . stage-in = 0 s
[2025-05-26 00:41:33] 2025-05-25 22:15:19,297 | INFO     | . payload execution = 18537 s
[2025-05-26 00:41:33] 2025-05-25 22:15:19,297 | INFO     | . stage-out = 4 s
[2025-05-26 00:41:33] 2025-05-25 22:15:19,297 | INFO     | . log creation = 1 s
[2025-05-26 00:41:33] 2025-05-25 22:15:19,297 | INFO     | ..............................
[2025-05-26 00:41:33] 2025-05-25 22:15:19,429 | INFO     | 
[2025-05-26 00:41:33] 2025-05-25 22:15:19,429 | INFO     | job summary report
[2025-05-26 00:41:33] 2025-05-25 22:15:19,429 | INFO     | --------------------------------------------------
[2025-05-26 00:41:33] 2025-05-25 22:15:19,429 | INFO     | PanDA job id: 6665721052
[2025-05-26 00:41:33] 2025-05-25 22:15:19,429 | INFO     | task id: 44871837
[2025-05-26 00:41:33] 2025-05-25 22:15:19,429 | INFO     | errors: (none)
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | pilot state: finished 
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | transexitcode: 0
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | exeerrorcode: 0
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | exeerrordiag: 
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | exitcode: 0
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | exitmsg: OK
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | cpuconsumptiontime: 71209 s
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | nevents: 400
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | neventsw: 0
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | pid: 17705
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | pgrp: 17705
[2025-05-26 00:41:33] 2025-05-25 22:15:19,430 | INFO     | corecount: 8
[2025-05-26 00:41:33] 2025-05-25 22:15:19,431 | INFO     | event service: False
[2025-05-26 00:41:33] 2025-05-25 22:15:19,431 | INFO     | sizes: {0: 2392910, 1: 2393595, 2: 2393794, 13: 2393794, 23: 2393850, 34: 2393878, 45: 2394034, 56: 2394062, 66: 2394090, 72: 2394324, 77: 2394352, 18556: 2426374,
[2025-05-26 00:41:33] 2025-05-25 22:15:19,431 | INFO     | --------------------------------------------------
[2025-05-26 00:41:33] 2025-05-25 22:15:19,431 | INFO     | 
[2025-05-26 00:41:33] 2025-05-25 22:15:19,431 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-05-26 00:41:33] 2025-05-25 22:15:20,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,042 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,042 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,042 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,043 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 00:41:33] 2025-05-25 22:15:20,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 00:41:33] 2025-05-25 22:15:20,043 | INFO     | job 6665721052 has completed (purged errors)
[2025-05-26 00:41:33] 2025-05-25 22:15:20,043 | INFO     | overall cleanup function is called
[2025-05-26 00:41:33] 2025-05-25 22:15:21,052 | INFO     | --- collectZombieJob: --- 10, [17705]
[2025-05-26 00:41:33] 2025-05-25 22:15:21,052 | INFO     | zombie collector waiting for pid 17705
[2025-05-26 00:41:33] 2025-05-25 22:15:21,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 00:41:33] 2025-05-25 22:15:21,052 | INFO     | collected zombie processes
[2025-05-26 00:41:33] 2025-05-25 22:15:21,052 | INFO     | will attempt to kill all subprocesses of pid=17705
[2025-05-26 00:41:33] 2025-05-25 22:15:21,172 | INFO     | process IDs to be killed: [17705] (in reverse order)
[2025-05-26 00:41:33] 2025-05-25 22:15:21,877 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 00:41:33] 2025-05-25 22:15:21,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 00:41:33] 2025-05-25 22:15:21,881 | INFO     | did not find any defunct processes belonging to 17705
[2025-05-26 00:41:33] 2025-05-25 22:15:21,884 | INFO     | did not find any defunct processes belonging to 17705
[2025-05-26 00:41:33] 2025-05-25 22:15:21,884 | INFO     | ready for new job
[2025-05-26 00:41:33] 2025-05-25 22:15:21,884 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 00:41:33] 2025-05-25 22:15:21,886 | INFO     | **************************************
[2025-05-26 00:41:33] 2025-05-25 22:15:21,886 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 00:41:33] 2025-05-25 22:15:21,886 | INFO     | **************************************
[2025-05-26 00:41:33] 2025-05-25 22:15:21,886 | INFO     | 
[2025-05-26 00:41:33] 2025-05-25 22:15:21,887 | INFO     | pilot is running in a VM
[2025-05-26 00:41:33] 2025-05-25 22:15:21,887 | INFO     | architecture information:
[2025-05-26 00:41:33] 2025-05-25 22:15:21,894 | INFO     | executing command: cat /etc/os-release
[2025-05-26 00:41:33] 2025-05-25 22:15:22,074 | INFO     | cat /etc/os-release:
[2025-05-26 00:41:33] NAME="CentOS Linux"
[2025-05-26 00:41:33] VERSION="7 (Core)"
[2025-05-26 00:41:33] ID="centos"
[2025-05-26 00:41:33] ID_LIKE="rhel fedora"
[2025-05-26 00:41:33] VERSION_ID="7"
[2025-05-26 00:41:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 00:41:33] ANSI_COLOR="0;31"
[2025-05-26 00:41:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 00:41:33] HOME_URL="https://www.centos.org/"
[2025-05-26 00:41:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 00:41:33] 
[2025-05-26 00:41:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 00:41:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 00:41:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 00:41:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 00:41:33] 
[2025-05-26 00:41:33] 2025-05-25 22:15:22,074 | INFO     | **************************************
[2025-05-26 00:41:33] 2025-05-25 22:15:22,578 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-05-26 00:41:33] 2025-05-25 22:15:22,793 | INFO     | sufficient remaining disk space (491644780544 B)
[2025-05-26 00:41:33] 2025-05-25 22:15:22,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 00:41:33] 2025-05-25 22:15:22,793 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 00:41:33] 2025-05-25 22:15:22,793 | INFO     | update_server=False
[2025-05-26 00:41:33] 2025-05-25 22:15:22,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 00:41:33] 2025-05-25 22:15:22,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 00:41:33] 2025-05-25 22:15:22,799 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 00:41:33] 2025-05-25 22:15:22,799 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 00:41:33] 2025-05-25 22:15:22,799 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 00:41:33] 2025-05-25 22:15:22,799 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 00:41:33] 2025-05-25 22:15:22,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 00:41:33] 2025-05-25 22:15:22,804 | INFO     | aborting loop
[2025-05-26 00:41:33] 2025-05-25 22:15:23,103 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 00:41:33] 2025-05-25 22:15:23,449 | INFO     | all data control threads have been joined
[2025-05-26 00:41:33] 2025-05-25 22:15:23,471 | INFO     | all job control threads have been joined
[2025-05-26 00:41:33] 2025-05-25 22:15:23,712 | INFO     | all payload control threads have been joined
[2025-05-26 00:41:33] 2025-05-25 22:15:23,800 | INFO     | [job] retrieve thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:23,810 | INFO     | [job] job monitor thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:24,025 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:24,325 | INFO     | [data] copytool_in thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:24,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 00:41:33] 2025-05-25 22:15:24,455 | INFO     | [data] control thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:24,477 | INFO     | [job] control thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:24,562 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:24,662 | INFO     | [payload] failed_post thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:24,716 | INFO     | [job] validate thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:24,718 | INFO     | [payload] control thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:24,994 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:25,015 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:25,110 | INFO     | [data] copytool_out thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:25,364 | INFO     | [payload] validate_post thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:25,461 | INFO     | [job] queue monitor thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:26,805 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 00:41:33] 2025-05-25 22:15:27,049 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140379884054336)>', '<ExcThread(monitor, started 140379445778176)>']
[2025-05-26 00:41:33] 2025-05-25 22:15:27,828 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 00:41:33] 2025-05-25 22:15:27,828 | INFO     | [monitor] control thread has ended
[2025-05-26 00:41:33] 2025-05-25 22:15:32,075 | INFO     | all workflow threads have been joined
[2025-05-26 00:41:33] 2025-05-25 22:15:32,075 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 00:41:33] 2025-05-25 22:15:32,075 | INFO     | traces error code: 0
[2025-05-26 00:41:33] 2025-05-25 22:15:32,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 00:41:33] 2025-05-25 22:15:32,417 [wrapper] ==== pilot stdout END ====
[2025-05-26 00:41:33] 2025-05-25 22:15:32,545 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 00:41:33] 2025-05-25 22:15:32,609 [wrapper] pilotpid: 1173
[2025-05-26 00:41:33] 2025-05-25 22:15:32,703 [wrapper] Pilot exit status: 0
[2025-05-26 00:41:33] 2025-05-25 22:15:33,221 [wrapper] pandaids: 6665721052
[2025-05-26 00:41:33] 2025-05-25 22:15:33,586 [wrapper] cleanup supervisor_pilot 24169 1174
[2025-05-26 00:41:33] 2025-05-25 22:15:33,598 [wrapper] Test setup, not cleaning
[2025-05-26 00:41:33] 2025-05-25 22:15:33,606 [wrapper] apfmon messages muted
[2025-05-26 00:41:33] 2025-05-25 22:15:33,702 [wrapper] ==== wrapper stdout END ====
[2025-05-26 00:41:33] 2025-05-25 22:15:33,753 [wrapper] ==== wrapper stderr END ====
[2025-05-26 00:41:33]  *** Error codes and diagnostics ***
[2025-05-26 00:41:33]     "exeErrorCode": 0,
[2025-05-26 00:41:33]     "exeErrorDiag": "",
[2025-05-26 00:41:33]     "pilotErrorCode": 0,
[2025-05-26 00:41:33]     "pilotErrorDiag": "",
[2025-05-26 00:41:33]  *** Listing of results directory ***
[2025-05-26 00:41:33] total 426580
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc    495897 May 25 09:40 pilot3.tar.gz
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc      5111 May 25 09:55 queuedata.json
[2025-05-26 00:41:33] -rwx------. 1 boinc boinc     37140 May 25 09:58 runpilot2-wrapper.sh
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc       100 May 25 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 00:41:33] -rwxr-xr-x. 1 boinc boinc      7986 May 25 18:33 run_atlas
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc       105 May 25 18:33 job.xml
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc      6371 May 25 18:33 init_data.xml
[2025-05-26 00:41:33] -rw-r--r--. 2 boinc boinc 227304870 May 25 18:33 EVNT.44871834._001255.pool.root.1
[2025-05-26 00:41:33] -rw-r--r--. 2 boinc boinc     15093 May 25 18:33 start_atlas.sh
[2025-05-26 00:41:33] drwxrwx--x. 2 boinc boinc        68 May 25 18:33 shared
[2025-05-26 00:41:33] -rw-r--r--. 2 boinc boinc    508882 May 25 18:33 input.tar.gz
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc         0 May 25 18:33 boinc_lockfile
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc      2557 May 25 19:00 pandaJob.out
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc    990811 May 25 19:02 agis_schedconf.cvmfs.json
[2025-05-26 00:41:33] drwx------. 4 boinc boinc      4096 May 25 19:02 pilot3
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc 201639467 May 26 00:12 HITS.44871837._031472.pool.root.1
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc       530 May 26 00:12 boinc_task_state.xml
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc      1019 May 26 00:13 memory_monitor_summary.json
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc   1596740 May 26 00:13 agis_ddmendpoints.agis.ALL.json
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc    416218 May 26 00:13 log.44871837._031472.job.log.tgz.1
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc      7687 May 26 00:15 heartbeat.json
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc        95 May 26 00:15 pilot_heartbeat.json
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc      4539 May 26 00:15 pilotlog.txt
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc   1613456 May 26 00:15 log.44871837._031472.job.log.1
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc       357 May 26 00:15 output.list
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc       620 May 26 00:15 runtime_log
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc   2048000 May 26 00:15 result.tar.gz
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc      8659 May 26 00:15 runtime_log.err
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc       657 May 26 00:15 6gBODmWQLd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhkTKDmGKLEPn.diag
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc      8192 May 26 00:41 boinc_mmap_file
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc        28 May 26 00:41 wrapper_checkpoint.txt
[2025-05-26 00:41:33] -rw-r--r--. 1 boinc boinc     20515 May 26 00:41 stderr.txt
[2025-05-26 00:41:33] HITS file was successfully produced:
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc 201639467 May 26 00:12 shared/HITS.pool.root.1
[2025-05-26 00:41:33]  *** Contents of shared directory: ***
[2025-05-26 00:41:33] total 421412
[2025-05-26 00:41:33] -rw-r--r--. 2 boinc boinc 227304870 May 25 18:33 ATLAS.root_0
[2025-05-26 00:41:33] -rw-r--r--. 2 boinc boinc     15093 May 25 18:33 start_atlas.sh
[2025-05-26 00:41:33] -rw-r--r--. 2 boinc boinc    508882 May 25 18:33 input.tar.gz
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc 201639467 May 26 00:12 HITS.pool.root.1
[2025-05-26 00:41:33] -rw-------. 1 boinc boinc   2048000 May 26 00:15 result.tar.gz
00:41:34 (18571): run_atlas exited; CPU time 71464.947733
00:41:34 (18571): called boinc_finish(0)

</stderr_txt>
]]>

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