Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:15:11 (2258615): wrapper (7.7.26015): starting
09:15:11 (2258615): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 09:15:11] Arguments: --nthreads 8
[2025-05-25 09:15:11] Threads: 8
[2025-05-25 09:15:11] Checking for CVMFS
[2025-05-25 09:15:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 09:15:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 09:15:11] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 09:15:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 09:15:12] 2.12.6.0 4103777 8951 338084 146402 0 786 20188498 32503808 30190 16776704 0 62742537 99.541 72698984 21297 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 09:15:12] CVMFS is ok
[2025-05-25 09:15:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 09:15:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 09:15:12] Further information can be found at the LHC@home message board.
[2025-05-25 09:15:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 09:15:12] Checking for apptainer binary...
[2025-05-25 09:15:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 09:15:12] Running /usr/bin/apptainer --version
[2025-05-25 09:15:12] apptainer version 1.4.1-1.el9
[2025-05-25 09:15:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 09:15:12] c7-7-36.aglt2.org
[2025-05-25 09:15:12] apptainer works
[2025-05-25 09:15:12] Set ATHENA_PROC_NUMBER=8
[2025-05-25 09:15:12] Set ATHENA_CORE_NUMBER=8
[2025-05-25 09:15:12] Starting ATLAS job with PandaID=6665720579
[2025-05-25 09:15:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 12:21:39]  *** The last 200 lines of the pilot log: ***
[2025-05-25 12:21:39] 2025-05-25 16:21:16,632 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:21:39] 2025-05-25 16:21:19,137 | INFO     | monitor loop #647: job 0:6665720579 is in state 'finished'
[2025-05-25 12:21:39] 2025-05-25 16:21:19,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:21:39] 2025-05-25 16:21:21,641 | INFO     | monitor loop #648: job 0:6665720579 is in state 'finished'
[2025-05-25 12:21:39] 2025-05-25 16:21:21,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:21:39] 2025-05-25 16:21:24,146 | INFO     | monitor loop #649: job 0:6665720579 is in state 'finished'
[2025-05-25 12:21:39] 2025-05-25 16:21:24,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:21:39] 2025-05-25 16:21:25,004 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 12:21:39] 2025-05-25 16:21:25,005 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6665720579/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 12:21:39] 2025-05-25 16:21:25,006 | INFO     | extracted standard info from prmon json
[2025-05-25 12:21:39] 2025-05-25 16:21:25,006 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 12:21:39] 2025-05-25 16:21:25,006 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 12:21:39] 2025-05-25 16:21:25,006 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 12:21:39] 2025-05-25 16:21:25,006 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 12:21:39] 2025-05-25 16:21:25,009 | INFO     | fitting pss+swap vs Time
[2025-05-25 12:21:39] 2025-05-25 16:21:25,011 | INFO     | sum of square deviations: 1869286411.478017
[2025-05-25 12:21:39] 2025-05-25 16:21:25,012 | INFO     | sum of deviations: -26741675177.24727
[2025-05-25 12:21:39] 2025-05-25 16:21:25,012 | INFO     | mean x: 1748184490.510989
[2025-05-25 12:21:39] 2025-05-25 16:21:25,012 | INFO     | mean y: 2401236.8736263737
[2025-05-25 12:21:39] 2025-05-25 16:21:25,012 | INFO     | -- intersect: 25011614115.16248
[2025-05-25 12:21:39] 2025-05-25 16:21:25,012 | INFO     | intersect: 25011614115.16248
[2025-05-25 12:21:39] 2025-05-25 16:21:25,013 | INFO     | chi2: 1.9358340822083173
[2025-05-25 12:21:39] 2025-05-25 16:21:25,013 | INFO     | sum of square deviations: 1719414443.9774046
[2025-05-25 12:21:39] 2025-05-25 16:21:25,014 | INFO     | sum of deviations: -25154727856.875698
[2025-05-25 12:21:39] 2025-05-25 16:21:25,014 | INFO     | mean x: 1748184338.0112994
[2025-05-25 12:21:39] 2025-05-25 16:21:25,014 | INFO     | mean y: 2402842.937853107
[2025-05-25 12:21:39] 2025-05-25 16:21:25,014 | INFO     | -- intersect: 25578029138.48183
[2025-05-25 12:21:39] 2025-05-25 16:21:25,014 | INFO     | intersect: 25578029138.48183
[2025-05-25 12:21:39] 2025-05-25 16:21:25,014 | INFO     | chi2: 1.9333795816417805
[2025-05-25 12:21:39] 2025-05-25 16:21:25,014 | INFO     | current chi2=1.9333795816417805 (change=0.12679292037966672 %)
[2025-05-25 12:21:39] 2025-05-25 16:21:25,014 | INFO     | right removable region: 176
[2025-05-25 12:21:39] 2025-05-25 16:21:25,015 | INFO     | sum of square deviations: 1719413223.9774046
[2025-05-25 12:21:39] 2025-05-25 16:21:25,015 | INFO     | sum of deviations: -54366001670.33336
[2025-05-25 12:21:39] 2025-05-25 16:21:25,015 | INFO     | mean x: 1748184643.0112994
[2025-05-25 12:21:39] 2025-05-25 16:21:25,015 | INFO     | mean y: 2428987.6666666665
[2025-05-25 12:21:39] 2025-05-25 16:21:25,015 | INFO     | -- intersect: 55278152063.79232
[2025-05-25 12:21:39] 2025-05-25 16:21:25,016 | INFO     | intersect: 55278152063.79232
[2025-05-25 12:21:39] 2025-05-25 16:21:25,016 | INFO     | chi2: 0.2832281289150783
[2025-05-25 12:21:39] 2025-05-25 16:21:25,016 | INFO     | current chi2=0.2832281289150783 (change=85.3691940069583 %)
[2025-05-25 12:21:39] 2025-05-25 16:21:25,016 | INFO     | sum of square deviations: 1577772748.9767404
[2025-05-25 12:21:39] 2025-05-25 16:21:25,017 | INFO     | sum of deviations: -49757904904.18602
[2025-05-25 12:21:39] 2025-05-25 16:21:25,017 | INFO     | mean x: 1748184795.511628
[2025-05-25 12:21:39] 2025-05-25 16:21:25,017 | INFO     | mean y: 2424018.093023256
[2025-05-25 12:21:39] 2025-05-25 16:21:25,017 | INFO     | -- intersect: 55134579689.07034
[2025-05-25 12:21:39] 2025-05-25 16:21:25,017 | INFO     | intersect: 55134579689.07034
[2025-05-25 12:21:39] 2025-05-25 16:21:25,017 | INFO     | chi2: 0.2829475162936568
[2025-05-25 12:21:39] 2025-05-25 16:21:25,017 | INFO     | current chi2=0.2829475162936568 (change=0.09907653681731458 %)
[2025-05-25 12:21:39] 2025-05-25 16:21:25,017 | INFO     | left removable region: 20
[2025-05-25 12:21:39] 2025-05-25 16:21:25,018 | INFO     | sum of square deviations: 1177149330.9935925
[2025-05-25 12:21:39] 2025-05-25 16:21:25,018 | INFO     | sum of deviations: -34822592182.73718
[2025-05-25 12:21:39] 2025-05-25 16:21:25,018 | INFO     | mean x: 1748184917.5064104
[2025-05-25 12:21:39] 2025-05-25 16:21:25,018 | INFO     | mean y: 2411219.237179487
[2025-05-25 12:21:39] 2025-05-25 16:21:25,018 | INFO     | -- intersect: 51717456064.86785
[2025-05-25 12:21:39] 2025-05-25 16:21:25,019 | INFO     | intersect: 51717456064.86785
[2025-05-25 12:21:39] 2025-05-25 16:21:25,019 | INFO     | chi2: 0.26057678071659357
[2025-05-25 12:21:39] 2025-05-25 16:21:25,019 | INFO     | -- intersect: 51717456064.86785
[2025-05-25 12:21:39] 2025-05-25 16:21:25,019 | INFO     | current memory leak: -29.58 B/s (using 156 data points, chi2=0.26)
[2025-05-25 12:21:39] 2025-05-25 16:21:25,019 | INFO     | ..............................
[2025-05-25 12:21:39] 2025-05-25 16:21:25,019 | INFO     | . Timing measurements:
[2025-05-25 12:21:39] 2025-05-25 16:21:25,019 | INFO     | . get job = 0 s
[2025-05-25 12:21:39] 2025-05-25 16:21:25,019 | INFO     | . initial setup = 3 s
[2025-05-25 12:21:39] 2025-05-25 16:21:25,020 | INFO     | . payload setup = 12 s
[2025-05-25 12:21:39] 2025-05-25 16:21:25,020 | INFO     | . stage-in = 0 s
[2025-05-25 12:21:39] 2025-05-25 16:21:25,020 | INFO     | . payload execution = 11102 s
[2025-05-25 12:21:39] 2025-05-25 16:21:25,020 | INFO     | . stage-out = 2 s
[2025-05-25 12:21:39] 2025-05-25 16:21:25,020 | INFO     | . log creation = 0 s
[2025-05-25 12:21:39] 2025-05-25 16:21:25,020 | INFO     | ..............................
[2025-05-25 12:21:39] 2025-05-25 16:21:25,083 | INFO     | 
[2025-05-25 12:21:39] 2025-05-25 16:21:25,083 | INFO     | job summary report
[2025-05-25 12:21:39] 2025-05-25 16:21:25,083 | INFO     | --------------------------------------------------
[2025-05-25 12:21:39] 2025-05-25 16:21:25,083 | INFO     | PanDA job id: 6665720579
[2025-05-25 12:21:39] 2025-05-25 16:21:25,083 | INFO     | task id: 44871837
[2025-05-25 12:21:39] 2025-05-25 16:21:25,083 | INFO     | errors: (none)
[2025-05-25 12:21:39] 2025-05-25 16:21:25,083 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 12:21:39] 2025-05-25 16:21:25,083 | INFO     | pilot state: finished 
[2025-05-25 12:21:39] 2025-05-25 16:21:25,083 | INFO     | transexitcode: 0
[2025-05-25 12:21:39] 2025-05-25 16:21:25,083 | INFO     | exeerrorcode: 0
[2025-05-25 12:21:39] 2025-05-25 16:21:25,083 | INFO     | exeerrordiag: 
[2025-05-25 12:21:39] 2025-05-25 16:21:25,083 | INFO     | exitcode: 0
[2025-05-25 12:21:39] 2025-05-25 16:21:25,084 | INFO     | exitmsg: OK
[2025-05-25 12:21:39] 2025-05-25 16:21:25,084 | INFO     | cpuconsumptiontime: 40283 s
[2025-05-25 12:21:39] 2025-05-25 16:21:25,084 | INFO     | nevents: 400
[2025-05-25 12:21:39] 2025-05-25 16:21:25,084 | INFO     | neventsw: 0
[2025-05-25 12:21:39] 2025-05-25 16:21:25,084 | INFO     | pid: 2279987
[2025-05-25 12:21:39] 2025-05-25 16:21:25,084 | INFO     | pgrp: 2279987
[2025-05-25 12:21:39] 2025-05-25 16:21:25,084 | INFO     | corecount: 8
[2025-05-25 12:21:39] 2025-05-25 16:21:25,084 | INFO     | event service: False
[2025-05-25 12:21:39] 2025-05-25 16:21:25,084 | INFO     | sizes: {0: 2393741, 7: 2393947, 11: 2393975, 11118: 2422794, 11119: 2422793, 11121: 2431790, 11124: 2431974, 11136: 2432144}
[2025-05-25 12:21:39] 2025-05-25 16:21:25,084 | INFO     | --------------------------------------------------
[2025-05-25 12:21:39] 2025-05-25 16:21:25,084 | INFO     | 
[2025-05-25 12:21:39] 2025-05-25 16:21:25,084 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-25 12:21:39] 2025-05-25 16:21:25,109 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,109 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,109 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,109 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,109 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,109 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,109 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,109 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,110 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,110 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,110 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,110 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,110 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,110 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 12:21:39] 2025-05-25 16:21:25,110 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,110 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 12:21:39] 2025-05-25 16:21:25,110 | INFO     | job 6665720579 has completed (purged errors)
[2025-05-25 12:21:39] 2025-05-25 16:21:25,110 | INFO     | overall cleanup function is called
[2025-05-25 12:21:39] 2025-05-25 16:21:26,120 | INFO     | --- collectZombieJob: --- 10, [2279987]
[2025-05-25 12:21:39] 2025-05-25 16:21:26,122 | INFO     | zombie collector waiting for pid 2279987
[2025-05-25 12:21:39] 2025-05-25 16:21:26,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 12:21:39] 2025-05-25 16:21:26,122 | INFO     | collected zombie processes
[2025-05-25 12:21:39] 2025-05-25 16:21:26,122 | INFO     | will attempt to kill all subprocesses of pid=2279987
[2025-05-25 12:21:39] 2025-05-25 16:21:26,695 | INFO     | process IDs to be killed: [2279987] (in reverse order)
[2025-05-25 12:21:39] 2025-05-25 16:21:26,878 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 12:21:39] 2025-05-25 16:21:26,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 12:21:39] 2025-05-25 16:21:26,905 | INFO     | did not find any defunct processes belonging to 2279987
[2025-05-25 12:21:39] 2025-05-25 16:21:26,931 | INFO     | did not find any defunct processes belonging to 2279987
[2025-05-25 12:21:39] 2025-05-25 16:21:26,931 | INFO     | ready for new job
[2025-05-25 12:21:39] 2025-05-25 16:21:26,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 12:21:39] 2025-05-25 16:21:26,933 | INFO     | **************************************
[2025-05-25 12:21:39] 2025-05-25 16:21:26,933 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 12:21:39] 2025-05-25 16:21:26,933 | INFO     | **************************************
[2025-05-25 12:21:39] 2025-05-25 16:21:26,933 | INFO     | 
[2025-05-25 12:21:39] 2025-05-25 16:21:26,952 | INFO     | architecture information:
[2025-05-25 12:21:39] 2025-05-25 16:21:26,953 | INFO     | executing command: cat /etc/os-release
[2025-05-25 12:21:39] 2025-05-25 16:21:26,969 | INFO     | cat /etc/os-release:
[2025-05-25 12:21:39] NAME="CentOS Linux"
[2025-05-25 12:21:39] VERSION="7 (Core)"
[2025-05-25 12:21:39] ID="centos"
[2025-05-25 12:21:39] ID_LIKE="rhel fedora"
[2025-05-25 12:21:39] VERSION_ID="7"
[2025-05-25 12:21:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 12:21:39] ANSI_COLOR="0;31"
[2025-05-25 12:21:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 12:21:39] HOME_URL="https://www.centos.org/"
[2025-05-25 12:21:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 12:21:39] 
[2025-05-25 12:21:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 12:21:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 12:21:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 12:21:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 12:21:39] 
[2025-05-25 12:21:39] 2025-05-25 16:21:26,969 | INFO     | **************************************
[2025-05-25 12:21:39] 2025-05-25 16:21:27,473 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-25 12:21:39] 2025-05-25 16:21:27,511 | INFO     | sufficient remaining disk space (94087675904 B)
[2025-05-25 12:21:39] 2025-05-25 16:21:27,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 12:21:39] 2025-05-25 16:21:27,512 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 12:21:39] 2025-05-25 16:21:27,512 | INFO     | update_server=False
[2025-05-25 12:21:39] 2025-05-25 16:21:27,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 12:21:39] 2025-05-25 16:21:27,512 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 12:21:39] 2025-05-25 16:21:27,512 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 12:21:39] 2025-05-25 16:21:27,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 12:21:39] 2025-05-25 16:21:27,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 12:21:39] 2025-05-25 16:21:27,677 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 12:21:39] 2025-05-25 16:21:27,677 | INFO     | aborting loop
[2025-05-25 12:21:39] 2025-05-25 16:21:27,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 12:21:39] 2025-05-25 16:21:27,730 | INFO     | all payload control threads have been joined
[2025-05-25 12:21:39] 2025-05-25 16:21:28,228 | INFO     | all data control threads have been joined
[2025-05-25 12:21:39] 2025-05-25 16:21:28,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 12:21:39] 2025-05-25 16:21:28,521 | INFO     | [job] retrieve thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:28,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:28,683 | INFO     | [job] job monitor thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:28,736 | INFO     | [payload] control thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:28,860 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:28,931 | INFO     | all job control threads have been joined
[2025-05-25 12:21:39] 2025-05-25 16:21:29,059 | INFO     | [payload] failed_post thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:29,194 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:29,234 | INFO     | [data] control thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:29,599 | INFO     | [payload] validate_post thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:29,694 | INFO     | [data] copytool_in thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:29,909 | INFO     | [job] validate thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:29,937 | INFO     | [job] control thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:30,003 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:30,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 12:21:39] 2025-05-25 16:21:30,504 | INFO     | [data] copytool_out thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:31,124 | INFO     | [job] queue monitor thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:31,697 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 12:21:39] 2025-05-25 16:21:33,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886184687424)>', '<ExcThread(monitor, started 139885407106816)>']
[2025-05-25 12:21:39] 2025-05-25 16:21:34,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 12:21:39] 2025-05-25 16:21:34,558 | INFO     | [monitor] control thread has ended
[2025-05-25 12:21:39] 2025-05-25 16:21:38,731 | INFO     | all workflow threads have been joined
[2025-05-25 12:21:39] 2025-05-25 16:21:38,731 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 12:21:39] 2025-05-25 16:21:38,731 | INFO     | traces error code: 0
[2025-05-25 12:21:39] 2025-05-25 16:21:38,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 12:21:39] 2025-05-25 16:21:38,869 [wrapper] ==== pilot stdout END ====
[2025-05-25 12:21:39] 2025-05-25 16:21:38,874 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 12:21:39] 2025-05-25 16:21:38,876 [wrapper] pilotpid: 2263350
[2025-05-25 12:21:39] 2025-05-25 16:21:38,881 [wrapper] Pilot exit status: 0
[2025-05-25 12:21:39] 2025-05-25 16:21:38,946 [wrapper] pandaids: 6665720579
[2025-05-25 12:21:39] 2025-05-25 16:21:39,083 [wrapper] cleanup supervisor_pilot 4178004 2263351
[2025-05-25 12:21:39] 2025-05-25 16:21:39,094 [wrapper] Test setup, not cleaning
[2025-05-25 12:21:39] 2025-05-25 16:21:39,128 [wrapper] apfmon messages muted
[2025-05-25 12:21:39] 2025-05-25 16:21:39,178 [wrapper] ==== wrapper stdout END ====
[2025-05-25 12:21:39] 2025-05-25 16:21:39,209 [wrapper] ==== wrapper stderr END ====
[2025-05-25 12:21:39]  *** Error codes and diagnostics ***
[2025-05-25 12:21:39]     "exeErrorCode": 0,
[2025-05-25 12:21:39]     "exeErrorDiag": "",
[2025-05-25 12:21:39]     "pilotErrorCode": 0,
[2025-05-25 12:21:39]     "pilotErrorDiag": "",
[2025-05-25 12:21:39]  *** Listing of results directory ***
[2025-05-25 12:21:39] total 426956
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas    495897 May 25 03:27 pilot3.tar.gz
[2025-05-25 12:21:39] -rwx------. 1 boincer umatlas     37140 May 25 03:31 runpilot2-wrapper.sh
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas      5111 May 25 03:31 queuedata.json
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas       100 May 25 09:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 12:21:39] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 09:15 run_atlas
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas       105 May 25 09:15 job.xml
[2025-05-25 12:21:39] -rw-r--r--. 2 boincer umatlas 228617857 May 25 09:15 EVNT.44871834._001238.pool.root.1
[2025-05-25 12:21:39] -rw-r--r--. 2 boincer umatlas     15093 May 25 09:15 start_atlas.sh
[2025-05-25 12:21:39] drwxrwx--x. 2 boincer umatlas      4096 May 25 09:15 shared
[2025-05-25 12:21:39] -rw-r--r--. 2 boincer umatlas    508876 May 25 09:15 input.tar.gz
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas         0 May 25 09:15 boinc_lockfile
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas      2559 May 25 09:15 pandaJob.out
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas    990811 May 25 09:15 agis_schedconf.cvmfs.json
[2025-05-25 12:21:39] drwx------. 4 boincer umatlas      4096 May 25 09:15 pilot3
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas      6935 May 25 12:20 init_data.xml
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas 202251203 May 25 12:20 HITS.44871837._031055.pool.root.1
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas       530 May 25 12:20 boinc_task_state.xml
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas      1034 May 25 12:21 memory_monitor_summary.json
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas   1596740 May 25 12:21 agis_ddmendpoints.agis.ALL.json
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas    360696 May 25 12:21 log.44871837._031055.job.log.tgz.1
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas        95 May 25 12:21 pilot_heartbeat.json
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas      7694 May 25 12:21 heartbeat.json
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas      8192 May 25 12:21 boinc_mmap_file
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas        28 May 25 12:21 wrapper_checkpoint.txt
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas      4476 May 25 12:21 pilotlog.txt
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas    890093 May 25 12:21 log.44871837._031055.job.log.1
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas       357 May 25 12:21 output.list
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas       620 May 25 12:21 runtime_log
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas   1269760 May 25 12:21 result.tar.gz
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas      8655 May 25 12:21 runtime_log.err
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas       655 May 25 12:21 r8JKDmv0Kd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmt5NKDmg5JXpn.diag
[2025-05-25 12:21:39] -rw-r--r--. 1 boincer umatlas     21200 May 25 12:21 stderr.txt
[2025-05-25 12:21:39] HITS file was successfully produced:
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas 202251203 May 25 12:20 shared/HITS.pool.root.1
[2025-05-25 12:21:39]  *** Contents of shared directory: ***
[2025-05-25 12:21:39] total 422536
[2025-05-25 12:21:39] -rw-r--r--. 2 boincer umatlas 228617857 May 25 09:15 ATLAS.root_0
[2025-05-25 12:21:39] -rw-r--r--. 2 boincer umatlas     15093 May 25 09:15 start_atlas.sh
[2025-05-25 12:21:39] -rw-r--r--. 2 boincer umatlas    508876 May 25 09:15 input.tar.gz
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas 202251203 May 25 12:20 HITS.pool.root.1
[2025-05-25 12:21:39] -rw-------. 1 boincer umatlas   1269760 May 25 12:21 result.tar.gz
12:21:41 (2258615): run_atlas exited; CPU time 40636.343909
12:21:41 (2258615): called boinc_finish(0)

</stderr_txt>
]]>

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