Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:19:30 (1289811): wrapper (7.7.26015): starting
08:19:30 (1289811): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 08:19:30] Arguments: --nthreads 8
[2025-05-25 08:19:30] Threads: 8
[2025-05-25 08:19:30] Checking for CVMFS
[2025-05-25 08:19:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 08:19:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 08:19:31] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 08:19:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 08:19:32] 2.12.6.0 7828 22901 471288 146402 0 131 22679348 32935936 26656 16776704 0 193333273 99.655 174853939 21711 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 08:19:32] CVMFS is ok
[2025-05-25 08:19:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 08:19:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 08:19:32] Further information can be found at the LHC@home message board.
[2025-05-25 08:19:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 08:19:32] Checking for apptainer binary...
[2025-05-25 08:19:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 08:19:32] Running /usr/bin/apptainer --version
[2025-05-25 08:19:32] apptainer version 1.4.1-1.el9
[2025-05-25 08:19:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 08:19:33] c7-3-29.aglt2.org
[2025-05-25 08:19:33] apptainer works
[2025-05-25 08:19:33] Set ATHENA_PROC_NUMBER=8
[2025-05-25 08:19:33] Set ATHENA_CORE_NUMBER=8
[2025-05-25 08:19:33] Starting ATLAS job with PandaID=6665682497
[2025-05-25 08:19:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 11:57:31]  *** The last 200 lines of the pilot log: ***
[2025-05-25 11:57:31] 2025-05-25 15:57:16,276 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 11:57:31] 2025-05-25 15:57:16,276 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6665682497/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 11:57:31] 2025-05-25 15:57:16,276 | INFO     | extracted standard info from prmon json
[2025-05-25 11:57:31] 2025-05-25 15:57:16,277 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 11:57:31] 2025-05-25 15:57:16,277 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 11:57:31] 2025-05-25 15:57:16,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 11:57:31] 2025-05-25 15:57:16,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 11:57:31] 2025-05-25 15:57:16,279 | INFO     | fitting pss+swap vs Time
[2025-05-25 11:57:31] 2025-05-25 15:57:16,285 | INFO     | sum of square deviations: 2912775022.19904
[2025-05-25 11:57:31] 2025-05-25 15:57:16,286 | INFO     | sum of deviations: 1619119804.5165954
[2025-05-25 11:57:31] 2025-05-25 15:57:16,286 | INFO     | mean x: 1748182170.0616114
[2025-05-25 11:57:31] 2025-05-25 15:57:16,287 | INFO     | mean y: 2154360.4218009477
[2025-05-25 11:57:31] 2025-05-25 15:57:16,287 | INFO     | -- intersect: -969604993.4168681
[2025-05-25 11:57:31] 2025-05-25 15:57:16,287 | INFO     | intersect: -969604993.4168681
[2025-05-25 11:57:31] 2025-05-25 15:57:16,287 | INFO     | chi2: 3.7758965645293787
[2025-05-25 11:57:31] 2025-05-25 15:57:16,287 | INFO     | sum of square deviations: 2710570544.67962
[2025-05-25 11:57:31] 2025-05-25 15:57:16,288 | INFO     | sum of deviations: 3652185518.69904
[2025-05-25 11:57:31] 2025-05-25 15:57:16,288 | INFO     | mean x: 1748182017.5631068
[2025-05-25 11:57:31] 2025-05-25 15:57:16,288 | INFO     | mean y: 2155875.4077669904
[2025-05-25 11:57:31] 2025-05-25 15:57:16,288 | INFO     | -- intersect: -2353320561.509206
[2025-05-25 11:57:31] 2025-05-25 15:57:16,288 | INFO     | intersect: -2353320561.509206
[2025-05-25 11:57:31] 2025-05-25 15:57:16,288 | INFO     | chi2: 3.7762937788193995
[2025-05-25 11:57:31] 2025-05-25 15:57:16,288 | INFO     | current chi2=3.7762937788193995 (change=-0.010519734405657054 %)
[2025-05-25 11:57:31] 2025-05-25 15:57:16,288 | INFO     | right removable region: 205
[2025-05-25 11:57:31] 2025-05-25 15:57:16,289 | INFO     | sum of square deviations: 2710562614.67962
[2025-05-25 11:57:31] 2025-05-25 15:57:16,290 | INFO     | sum of deviations: -47763762409.10683
[2025-05-25 11:57:31] 2025-05-25 15:57:16,290 | INFO     | mean x: 1748182322.5631068
[2025-05-25 11:57:31] 2025-05-25 15:57:16,290 | INFO     | mean y: 2191451.354368932
[2025-05-25 11:57:31] 2025-05-25 15:57:16,290 | INFO     | -- intersect: 30807517493.444046
[2025-05-25 11:57:31] 2025-05-25 15:57:16,290 | INFO     | intersect: 30807517493.444046
[2025-05-25 11:57:31] 2025-05-25 15:57:16,290 | INFO     | chi2: 0.6724604835382662
[2025-05-25 11:57:31] 2025-05-25 15:57:16,290 | INFO     | current chi2=0.6724604835382662 (change=82.19070697393217 %)
[2025-05-25 11:57:31] 2025-05-25 15:57:16,290 | INFO     | sum of square deviations: 2517931782.1592045
[2025-05-25 11:57:31] 2025-05-25 15:57:16,291 | INFO     | sum of deviations: -58971168553.05469
[2025-05-25 11:57:31] 2025-05-25 15:57:16,291 | INFO     | mean x: 1748182475.0646765
[2025-05-25 11:57:31] 2025-05-25 15:57:16,291 | INFO     | mean y: 2200235.696517413
[2025-05-25 11:57:31] 2025-05-25 15:57:16,291 | INFO     | -- intersect: 40945471268.293945
[2025-05-25 11:57:31] 2025-05-25 15:57:16,291 | INFO     | intersect: 40945471268.293945
[2025-05-25 11:57:31] 2025-05-25 15:57:16,291 | INFO     | chi2: 0.3726890410001187
[2025-05-25 11:57:31] 2025-05-25 15:57:16,292 | INFO     | current chi2=0.3726890410001187 (change=44.578298632634684 %)
[2025-05-25 11:57:31] 2025-05-25 15:57:16,292 | INFO     | sum of square deviations: 2334661978.265303
[2025-05-25 11:57:31] 2025-05-25 15:57:16,292 | INFO     | sum of deviations: -54289821229.28571
[2025-05-25 11:57:31] 2025-05-25 15:57:16,293 | INFO     | mean x: 1748182627.5612245
[2025-05-25 11:57:31] 2025-05-25 15:57:16,293 | INFO     | mean y: 2196342.8571428573
[2025-05-25 11:57:31] 2025-05-25 15:57:16,293 | INFO     | -- intersect: 40654129346.43508
[2025-05-25 11:57:31] 2025-05-25 15:57:16,293 | INFO     | intersect: 40654129346.43508
[2025-05-25 11:57:31] 2025-05-25 15:57:16,293 | INFO     | chi2: 0.3714123249464557
[2025-05-25 11:57:31] 2025-05-25 15:57:16,293 | INFO     | current chi2=0.3714123249464557 (change=0.342568713648483 %)
[2025-05-25 11:57:31] 2025-05-25 15:57:16,293 | INFO     | left removable region: 30
[2025-05-25 11:57:31] 2025-05-25 15:57:16,293 | INFO     | sum of square deviations: 1661788602.7200048
[2025-05-25 11:57:31] 2025-05-25 15:57:16,294 | INFO     | sum of deviations: -27163155629.76001
[2025-05-25 11:57:31] 2025-05-25 15:57:16,294 | INFO     | mean x: 1748182902.04
[2025-05-25 11:57:31] 2025-05-25 15:57:16,294 | INFO     | mean y: 2176327.1085714283
[2025-05-25 11:57:31] 2025-05-25 15:57:16,294 | INFO     | -- intersect: 28577510253.260773
[2025-05-25 11:57:31] 2025-05-25 15:57:16,294 | INFO     | intersect: 28577510253.260773
[2025-05-25 11:57:31] 2025-05-25 15:57:16,294 | INFO     | chi2: 0.28432879003419437
[2025-05-25 11:57:31] 2025-05-25 15:57:16,294 | INFO     | -- intersect: 28577510253.260773
[2025-05-25 11:57:31] 2025-05-25 15:57:16,294 | INFO     | current memory leak: -16.35 B/s (using 175 data points, chi2=0.28)
[2025-05-25 11:57:31] 2025-05-25 15:57:16,295 | INFO     | ..............................
[2025-05-25 11:57:31] 2025-05-25 15:57:16,295 | INFO     | . Timing measurements:
[2025-05-25 11:57:31] 2025-05-25 15:57:16,295 | INFO     | . get job = 0 s
[2025-05-25 11:57:31] 2025-05-25 15:57:16,295 | INFO     | . initial setup = 5 s
[2025-05-25 11:57:31] 2025-05-25 15:57:16,295 | INFO     | . payload setup = 49 s
[2025-05-25 11:57:31] 2025-05-25 15:57:16,295 | INFO     | . stage-in = 0 s
[2025-05-25 11:57:31] 2025-05-25 15:57:16,295 | INFO     | . payload execution = 12878 s
[2025-05-25 11:57:31] 2025-05-25 15:57:16,295 | INFO     | . stage-out = 2 s
[2025-05-25 11:57:31] 2025-05-25 15:57:16,295 | INFO     | . log creation = 0 s
[2025-05-25 11:57:31] 2025-05-25 15:57:16,295 | INFO     | ..............................
[2025-05-25 11:57:31] 2025-05-25 15:57:16,357 | INFO     | 
[2025-05-25 11:57:31] 2025-05-25 15:57:16,357 | INFO     | job summary report
[2025-05-25 11:57:31] 2025-05-25 15:57:16,358 | INFO     | --------------------------------------------------
[2025-05-25 11:57:31] 2025-05-25 15:57:16,358 | INFO     | PanDA job id: 6665682497
[2025-05-25 11:57:31] 2025-05-25 15:57:16,358 | INFO     | task id: 44871837
[2025-05-25 11:57:31] 2025-05-25 15:57:16,358 | INFO     | errors: (none)
[2025-05-25 11:57:31] 2025-05-25 15:57:16,358 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 11:57:31] 2025-05-25 15:57:16,358 | INFO     | pilot state: finished 
[2025-05-25 11:57:31] 2025-05-25 15:57:16,358 | INFO     | transexitcode: 0
[2025-05-25 11:57:31] 2025-05-25 15:57:16,358 | INFO     | exeerrorcode: 0
[2025-05-25 11:57:31] 2025-05-25 15:57:16,358 | INFO     | exeerrordiag: 
[2025-05-25 11:57:31] 2025-05-25 15:57:16,358 | INFO     | exitcode: 0
[2025-05-25 11:57:31] 2025-05-25 15:57:16,358 | INFO     | exitmsg: OK
[2025-05-25 11:57:31] 2025-05-25 15:57:16,358 | INFO     | cpuconsumptiontime: 37813 s
[2025-05-25 11:57:31] 2025-05-25 15:57:16,359 | INFO     | nevents: 400
[2025-05-25 11:57:31] 2025-05-25 15:57:16,359 | INFO     | neventsw: 0
[2025-05-25 11:57:31] 2025-05-25 15:57:16,359 | INFO     | pid: 1330074
[2025-05-25 11:57:31] 2025-05-25 15:57:16,359 | INFO     | pgrp: 1330074
[2025-05-25 11:57:31] 2025-05-25 15:57:16,359 | INFO     | corecount: 8
[2025-05-25 11:57:31] 2025-05-25 15:57:16,359 | INFO     | event service: False
[2025-05-25 11:57:31] 2025-05-25 15:57:16,359 | INFO     | sizes: {0: 2393570, 1: 2393769, 12: 2393769, 23: 2393797, 30: 2394031, 34: 2394059, 12931: 2423753, 12935: 2432750, 12946: 2432864}
[2025-05-25 11:57:31] 2025-05-25 15:57:16,359 | INFO     | --------------------------------------------------
[2025-05-25 11:57:31] 2025-05-25 15:57:16,359 | INFO     | 
[2025-05-25 11:57:31] 2025-05-25 15:57:16,359 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-05-25 11:57:31] 2025-05-25 15:57:16,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 11:57:31] 2025-05-25 15:57:16,399 | INFO     | job 6665682497 has completed (purged errors)
[2025-05-25 11:57:31] 2025-05-25 15:57:16,399 | INFO     | overall cleanup function is called
[2025-05-25 11:57:31] 2025-05-25 15:57:17,418 | INFO     | --- collectZombieJob: --- 10, [1330074]
[2025-05-25 11:57:31] 2025-05-25 15:57:17,436 | INFO     | zombie collector waiting for pid 1330074
[2025-05-25 11:57:31] 2025-05-25 15:57:17,436 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 11:57:31] 2025-05-25 15:57:17,436 | INFO     | collected zombie processes
[2025-05-25 11:57:31] 2025-05-25 15:57:17,436 | INFO     | will attempt to kill all subprocesses of pid=1330074
[2025-05-25 11:57:31] 2025-05-25 15:57:17,981 | INFO     | process IDs to be killed: [1330074] (in reverse order)
[2025-05-25 11:57:31] 2025-05-25 15:57:18,180 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 11:57:31] 2025-05-25 15:57:18,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 11:57:31] 2025-05-25 15:57:18,207 | INFO     | did not find any defunct processes belonging to 1330074
[2025-05-25 11:57:31] 2025-05-25 15:57:18,235 | INFO     | did not find any defunct processes belonging to 1330074
[2025-05-25 11:57:31] 2025-05-25 15:57:18,235 | INFO     | ready for new job
[2025-05-25 11:57:31] 2025-05-25 15:57:18,235 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 11:57:31] 2025-05-25 15:57:18,237 | INFO     | **************************************
[2025-05-25 11:57:31] 2025-05-25 15:57:18,237 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 11:57:31] 2025-05-25 15:57:18,237 | INFO     | **************************************
[2025-05-25 11:57:31] 2025-05-25 15:57:18,237 | INFO     | 
[2025-05-25 11:57:31] 2025-05-25 15:57:18,256 | INFO     | architecture information:
[2025-05-25 11:57:31] 2025-05-25 15:57:18,257 | INFO     | executing command: cat /etc/os-release
[2025-05-25 11:57:31] 2025-05-25 15:57:18,280 | INFO     | cat /etc/os-release:
[2025-05-25 11:57:31] NAME="CentOS Linux"
[2025-05-25 11:57:31] VERSION="7 (Core)"
[2025-05-25 11:57:31] ID="centos"
[2025-05-25 11:57:31] ID_LIKE="rhel fedora"
[2025-05-25 11:57:31] VERSION_ID="7"
[2025-05-25 11:57:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 11:57:31] ANSI_COLOR="0;31"
[2025-05-25 11:57:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 11:57:31] HOME_URL="https://www.centos.org/"
[2025-05-25 11:57:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 11:57:31] 
[2025-05-25 11:57:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 11:57:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 11:57:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 11:57:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 11:57:31] 
[2025-05-25 11:57:31] 2025-05-25 15:57:18,280 | INFO     | **************************************
[2025-05-25 11:57:31] 2025-05-25 15:57:18,784 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-05-25 11:57:31] 2025-05-25 15:57:18,805 | INFO     | sufficient remaining disk space (73516711936 B)
[2025-05-25 11:57:31] 2025-05-25 15:57:18,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 11:57:31] 2025-05-25 15:57:18,805 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 11:57:31] 2025-05-25 15:57:18,805 | INFO     | update_server=False
[2025-05-25 11:57:31] 2025-05-25 15:57:18,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 11:57:31] 2025-05-25 15:57:18,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 11:57:31] 2025-05-25 15:57:18,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 11:57:31] 2025-05-25 15:57:18,806 | INFO     | aborting loop
[2025-05-25 11:57:31] 2025-05-25 15:57:18,879 | INFO     | all payload control threads have been joined
[2025-05-25 11:57:31] 2025-05-25 15:57:19,384 | INFO     | all data control threads have been joined
[2025-05-25 11:57:31] 2025-05-25 15:57:19,543 | INFO     | all job control threads have been joined
[2025-05-25 11:57:31] 2025-05-25 15:57:19,574 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 11:57:31] 2025-05-25 15:57:19,574 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 11:57:31] 2025-05-25 15:57:19,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 11:57:31] 2025-05-25 15:57:19,821 | INFO     | [job] retrieve thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:19,822 | INFO     | [job] job monitor thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:19,887 | INFO     | [payload] control thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:19,928 | INFO     | [payload] validate_post thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:19,938 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:19,973 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:20,206 | INFO     | [data] copytool_in thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:20,390 | INFO     | [data] control thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:20,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 11:57:31] 2025-05-25 15:57:20,549 | INFO     | [job] control thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:20,550 | INFO     | [payload] failed_post thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:20,699 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:20,722 | INFO     | [job] validate thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:20,813 | INFO     | [data] copytool_out thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:20,878 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:21,382 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 11:57:31] 2025-05-25 15:57:22,388 | INFO     | [job] queue monitor thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:24,560 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 11:57:31] 2025-05-25 15:57:25,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348756240192)>', '<ExcThread(monitor, started 140348114331392)>']
[2025-05-25 11:57:31] 2025-05-25 15:57:26,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 11:57:31] 2025-05-25 15:57:26,613 | INFO     | [monitor] control thread has ended
[2025-05-25 11:57:31] 2025-05-25 15:57:30,941 | INFO     | all workflow threads have been joined
[2025-05-25 11:57:31] 2025-05-25 15:57:30,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 11:57:31] 2025-05-25 15:57:30,942 | INFO     | traces error code: 0
[2025-05-25 11:57:31] 2025-05-25 15:57:30,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 11:57:31] 2025-05-25 15:57:31,058 [wrapper] ==== pilot stdout END ====
[2025-05-25 11:57:31] 2025-05-25 15:57:31,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 11:57:31] 2025-05-25 15:57:31,063 [wrapper] pilotpid: 1300458
[2025-05-25 11:57:31] 2025-05-25 15:57:31,065 [wrapper] Pilot exit status: 0
[2025-05-25 11:57:31] 2025-05-25 15:57:31,092 [wrapper] pandaids: 6665682497
[2025-05-25 11:57:31] 2025-05-25 15:57:31,207 [wrapper] cleanup supervisor_pilot 3357536 1300459
[2025-05-25 11:57:31] 2025-05-25 15:57:31,211 [wrapper] Test setup, not cleaning
[2025-05-25 11:57:31] 2025-05-25 15:57:31,213 [wrapper] apfmon messages muted
[2025-05-25 11:57:31] 2025-05-25 15:57:31,216 [wrapper] ==== wrapper stdout END ====
[2025-05-25 11:57:31] 2025-05-25 15:57:31,218 [wrapper] ==== wrapper stderr END ====
[2025-05-25 11:57:31]  *** Error codes and diagnostics ***
[2025-05-25 11:57:31]     "exeErrorCode": 0,
[2025-05-25 11:57:31]     "exeErrorDiag": "",
[2025-05-25 11:57:31]     "pilotErrorCode": 0,
[2025-05-25 11:57:31]     "pilotErrorDiag": "",
[2025-05-25 11:57:31]  *** Listing of results directory ***
[2025-05-25 11:57:31] total 416832
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas    495897 May 24 18:42 pilot3.tar.gz
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas      5111 May 24 18:52 queuedata.json
[2025-05-25 11:57:31] -rwx------. 1 boincer umatlas     37140 May 24 18:53 runpilot2-wrapper.sh
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas       100 May 25 08:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 11:57:31] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 08:19 run_atlas
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas       105 May 25 08:19 job.xml
[2025-05-25 11:57:31] -rw-r--r--. 2 boincer umatlas 223782153 May 25 08:19 EVNT.44871834._001010.pool.root.1
[2025-05-25 11:57:31] -rw-r--r--. 2 boincer umatlas     15093 May 25 08:19 start_atlas.sh
[2025-05-25 11:57:31] drwxrwx--x. 2 boincer umatlas      4096 May 25 08:19 shared
[2025-05-25 11:57:31] -rw-r--r--. 2 boincer umatlas    508883 May 25 08:19 input.tar.gz
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas         0 May 25 08:19 boinc_lockfile
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas      2559 May 25 08:19 pandaJob.out
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas    990811 May 25 08:20 agis_schedconf.cvmfs.json
[2025-05-25 11:57:31] drwx------. 4 boincer umatlas      4096 May 25 08:20 pilot3
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas 196392308 May 25 11:56 HITS.44871837._025343.pool.root.1
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas       531 May 25 11:56 boinc_task_state.xml
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas      1045 May 25 11:56 memory_monitor_summary.json
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas   1596740 May 25 11:57 agis_ddmendpoints.agis.ALL.json
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas    386703 May 25 11:57 log.44871837._025343.job.log.tgz.1
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas      6934 May 25 11:57 init_data.xml
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas        95 May 25 11:57 pilot_heartbeat.json
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas      7696 May 25 11:57 heartbeat.json
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas      8192 May 25 11:57 boinc_mmap_file
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas        28 May 25 11:57 wrapper_checkpoint.txt
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas      4353 May 25 11:57 pilotlog.txt
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas   1024928 May 25 11:57 log.44871837._025343.job.log.1
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas       357 May 25 11:57 output.list
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas       620 May 25 11:57 runtime_log
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas   1433600 May 25 11:57 result.tar.gz
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas      8655 May 25 11:57 runtime_log.err
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas       654 May 25 11:57 GStMDmKvCd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTmSKDmeszQFn.diag
[2025-05-25 11:57:31] -rw-r--r--. 1 boincer umatlas     20910 May 25 11:57 stderr.txt
[2025-05-25 11:57:31] HITS file was successfully produced:
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas 196392308 May 25 11:56 shared/HITS.pool.root.1
[2025-05-25 11:57:31]  *** Contents of shared directory: ***
[2025-05-25 11:57:31] total 412256
[2025-05-25 11:57:31] -rw-r--r--. 2 boincer umatlas 223782153 May 25 08:19 ATLAS.root_0
[2025-05-25 11:57:31] -rw-r--r--. 2 boincer umatlas     15093 May 25 08:19 start_atlas.sh
[2025-05-25 11:57:31] -rw-r--r--. 2 boincer umatlas    508883 May 25 08:19 input.tar.gz
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas 196392308 May 25 11:56 HITS.pool.root.1
[2025-05-25 11:57:31] -rw-------. 1 boincer umatlas   1433600 May 25 11:57 result.tar.gz
11:57:32 (1289811): run_atlas exited; CPU time 38284.464555
11:57:32 (1289811): called boinc_finish(0)

</stderr_txt>
]]>

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