Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:21:50 (726318): wrapper (7.7.26015): starting
08:21:50 (726318): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 08:21:50] Arguments: --nthreads 8
[2025-05-25 08:21:50] Threads: 8
[2025-05-25 08:21:50] Checking for CVMFS
[2025-05-25 08:21:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 08:21:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 08:21:51] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 08:21:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 08:21:52] 2.12.6.0 8763 18380 522040 146402 3 26 23652186 32935937 38639 16776704 0 230152548 99.639 214589000 37238 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 08:21:52] CVMFS is ok
[2025-05-25 08:21:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 08:21:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 08:21:52] Further information can be found at the LHC@home message board.
[2025-05-25 08:21:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 08:21:52] Checking for apptainer binary...
[2025-05-25 08:21:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 08:21:52] Running /usr/bin/apptainer --version
[2025-05-25 08:21:53] apptainer version 1.4.1-1.el9
[2025-05-25 08:21:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 08:21:53] c7-9-14.aglt2.org
[2025-05-25 08:21:53] apptainer works
[2025-05-25 08:21:53] Set ATHENA_PROC_NUMBER=8
[2025-05-25 08:21:53] Set ATHENA_CORE_NUMBER=8
[2025-05-25 08:21:53] Starting ATLAS job with PandaID=6665713854
[2025-05-25 08:21:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 10:09:06]  *** The last 200 lines of the pilot log: ***
[2025-05-25 10:09:06] 2025-05-25 14:08:08,833 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 10:09:06] 2025-05-25 14:08:08,833 | INFO     | log transfer has been attempted: DONE
[2025-05-25 10:09:06] 2025-05-25 14:08:08,833 | INFO     | job 6665713854 has finished - writing final server update
[2025-05-25 10:09:06] 2025-05-25 14:08:08,838 | INFO     | total number of processed events: 400 (read)
[2025-05-25 10:09:06] 2025-05-25 14:08:08,895 | INFO     | executing command: lscpu
[2025-05-25 10:09:06] 2025-05-25 14:08:09,142 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 10:09:06] 2025-05-25 14:08:09,279 | INFO     | PID=816375 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-25 10:09:06] 2025-05-25 14:08:09,279 | INFO     | .. there are 62 such processes running
[2025-05-25 10:09:06] 2025-05-25 14:08:09,913 | WARNING  | process 1021328 can no longer be monitored (due to stat problems) - aborting
[2025-05-25 10:09:06] 2025-05-25 14:08:09,913 | INFO     | using path: /tmp/boinchome/slots/15/PanDA_Pilot-6665713854/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 10:09:06] 2025-05-25 14:08:11,671 | INFO     | number of running child processes to parent process 1021328: 1
[2025-05-25 10:09:06] 2025-05-25 14:08:11,671 | INFO     | maximum number of monitored processes: 8
[2025-05-25 10:09:06] 2025-05-25 14:08:14,204 | INFO     | monitor loop #374: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:14,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:16,724 | INFO     | monitor loop #375: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:16,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:19,245 | INFO     | monitor loop #376: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:19,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:21,756 | INFO     | monitor loop #377: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:21,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:23,733 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-05-25 10:09:06] 2025-05-25 14:08:24,276 | INFO     | monitor loop #378: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:24,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:26,783 | INFO     | monitor loop #379: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:26,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:29,298 | INFO     | monitor loop #380: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:29,299 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:31,810 | INFO     | monitor loop #381: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:31,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:34,196 | INFO     | PID=816375 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-25 10:09:06] 2025-05-25 14:08:34,196 | INFO     | .. there are 62 such processes running
[2025-05-25 10:09:06] 2025-05-25 14:08:34,326 | INFO     | monitor loop #382: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:34,327 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:36,835 | INFO     | monitor loop #383: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:36,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:39,340 | INFO     | monitor loop #384: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:39,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:41,845 | INFO     | monitor loop #385: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:41,846 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:44,351 | INFO     | monitor loop #386: job 0:6665713854 is in state 'finished'
[2025-05-25 10:09:06] 2025-05-25 14:08:44,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 10:09:06] 2025-05-25 14:08:44,936 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-25 10:09:06] 2025-05-25 14:08:44,936 | INFO     | using path: /tmp/boinchome/slots/15/PanDA_Pilot-6665713854/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 10:09:06] 2025-05-25 14:08:44,936 | INFO     | extracted standard info from prmon json
[2025-05-25 10:09:06] 2025-05-25 14:08:44,936 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 10:09:06] 2025-05-25 14:08:44,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 10:09:06] 2025-05-25 14:08:44,937 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 10:09:06] 2025-05-25 14:08:44,937 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 10:09:06] 2025-05-25 14:08:44,938 | INFO     | fitting pss+swap vs Time
[2025-05-25 10:09:06] 2025-05-25 14:08:44,938 | INFO     | sum of square deviations: 241411514.91304326
[2025-05-25 10:09:06] 2025-05-25 14:08:44,938 | INFO     | sum of deviations: 5183048522.282609
[2025-05-25 10:09:06] 2025-05-25 14:08:44,938 | INFO     | mean x: 1748179180.8913043
[2025-05-25 10:09:06] 2025-05-25 14:08:44,938 | INFO     | mean y: 2148452.2282608696
[2025-05-25 10:09:06] 2025-05-25 14:08:44,938 | INFO     | -- intersect: -37530847947.99583
[2025-05-25 10:09:06] 2025-05-25 14:08:44,938 | INFO     | intersect: -37530847947.99583
[2025-05-25 10:09:06] 2025-05-25 14:08:44,938 | INFO     | chi2: 0.421946538341502
[2025-05-25 10:09:06] 2025-05-25 14:08:44,939 | INFO     | -- intersect: -37530847947.99583
[2025-05-25 10:09:06] 2025-05-25 14:08:44,939 | INFO     | current memory leak: 21.47 B/s (using 92 data points, chi2=0.42)
[2025-05-25 10:09:06] 2025-05-25 14:08:44,939 | INFO     | ..............................
[2025-05-25 10:09:06] 2025-05-25 14:08:44,939 | INFO     | . Timing measurements:
[2025-05-25 10:09:06] 2025-05-25 14:08:44,939 | INFO     | . get job = 0 s
[2025-05-25 10:09:06] 2025-05-25 14:08:44,939 | INFO     | . initial setup = 5 s
[2025-05-25 10:09:06] 2025-05-25 14:08:44,939 | INFO     | . payload setup = 118 s
[2025-05-25 10:09:06] 2025-05-25 14:08:44,939 | INFO     | . stage-in = 0 s
[2025-05-25 10:09:06] 2025-05-25 14:08:44,939 | INFO     | . payload execution = 6033 s
[2025-05-25 10:09:06] 2025-05-25 14:08:44,939 | INFO     | . stage-out = 1 s
[2025-05-25 10:09:06] 2025-05-25 14:08:44,939 | INFO     | . log creation = 0 s
[2025-05-25 10:09:06] 2025-05-25 14:08:44,939 | INFO     | ..............................
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | 
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | job summary report
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | --------------------------------------------------
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | PanDA job id: 6665713854
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | task id: 44871837
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | errors: (none)
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | pilot state: finished 
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | transexitcode: 0
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | exeerrorcode: 0
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | exeerrordiag: 
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | exitcode: 0
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | exitmsg: OK
[2025-05-25 10:09:06] 2025-05-25 14:08:45,131 | INFO     | cpuconsumptiontime: 26432 s
[2025-05-25 10:09:06] 2025-05-25 14:08:45,132 | INFO     | nevents: 400
[2025-05-25 10:09:06] 2025-05-25 14:08:45,132 | INFO     | neventsw: 0
[2025-05-25 10:09:06] 2025-05-25 14:08:45,132 | INFO     | pid: 1021328
[2025-05-25 10:09:06] 2025-05-25 14:08:45,132 | INFO     | pgrp: 1021328
[2025-05-25 10:09:06] 2025-05-25 14:08:45,132 | INFO     | corecount: 8
[2025-05-25 10:09:06] 2025-05-25 14:08:45,132 | INFO     | event service: False
[2025-05-25 10:09:06] 2025-05-25 14:08:45,132 | INFO     | sizes: {0: 2393520, 1: 2393719, 12: 2393719, 23: 2393747, 34: 2393775, 44: 2393803, 46: 2394165, 55: 2394193, 6156: 2420663, 6158: 2429606, 6159: 2429662, 6197: 24
[2025-05-25 10:09:06] 2025-05-25 14:08:45,132 | INFO     | --------------------------------------------------
[2025-05-25 10:09:06] 2025-05-25 14:08:45,132 | INFO     | 
[2025-05-25 10:09:06] 2025-05-25 14:08:45,132 | INFO     | executing command: ls -lF /tmp/boinchome/slots/15
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,368 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 10:09:06] 2025-05-25 14:08:45,369 | INFO     | job 6665713854 has completed (purged errors)
[2025-05-25 10:09:06] 2025-05-25 14:08:45,369 | INFO     | overall cleanup function is called
[2025-05-25 10:09:06] 2025-05-25 14:08:46,376 | INFO     | --- collectZombieJob: --- 10, [1021328]
[2025-05-25 10:09:06] 2025-05-25 14:08:46,377 | INFO     | zombie collector waiting for pid 1021328
[2025-05-25 10:09:06] 2025-05-25 14:08:46,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 10:09:06] 2025-05-25 14:08:46,377 | INFO     | collected zombie processes
[2025-05-25 10:09:06] 2025-05-25 14:08:46,377 | INFO     | will attempt to kill all subprocesses of pid=1021328
[2025-05-25 10:09:06] 2025-05-25 14:08:49,673 | INFO     | process IDs to be killed: [1021328] (in reverse order)
[2025-05-25 10:09:06] 2025-05-25 14:08:50,905 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 10:09:06] 2025-05-25 14:08:50,905 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 10:09:06] 2025-05-25 14:08:51,061 | INFO     | did not find any defunct processes belonging to 1021328
[2025-05-25 10:09:06] 2025-05-25 14:08:51,219 | INFO     | did not find any defunct processes belonging to 1021328
[2025-05-25 10:09:06] 2025-05-25 14:08:51,219 | INFO     | ready for new job
[2025-05-25 10:09:06] 2025-05-25 14:08:51,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 10:09:06] 2025-05-25 14:08:51,220 | INFO     | **************************************
[2025-05-25 10:09:06] 2025-05-25 14:08:51,221 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 10:09:06] 2025-05-25 14:08:51,221 | INFO     | **************************************
[2025-05-25 10:09:06] 2025-05-25 14:08:51,221 | INFO     | 
[2025-05-25 10:09:06] 2025-05-25 14:08:51,242 | INFO     | architecture information:
[2025-05-25 10:09:06] 2025-05-25 14:08:51,254 | INFO     | executing command: cat /etc/os-release
[2025-05-25 10:09:06] 2025-05-25 14:08:51,374 | INFO     | cat /etc/os-release:
[2025-05-25 10:09:06] NAME="CentOS Linux"
[2025-05-25 10:09:06] VERSION="7 (Core)"
[2025-05-25 10:09:06] ID="centos"
[2025-05-25 10:09:06] ID_LIKE="rhel fedora"
[2025-05-25 10:09:06] VERSION_ID="7"
[2025-05-25 10:09:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 10:09:06] ANSI_COLOR="0;31"
[2025-05-25 10:09:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 10:09:06] HOME_URL="https://www.centos.org/"
[2025-05-25 10:09:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 10:09:06] 
[2025-05-25 10:09:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 10:09:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 10:09:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 10:09:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 10:09:06] 
[2025-05-25 10:09:06] 2025-05-25 14:08:51,374 | INFO     | **************************************
[2025-05-25 10:09:06] 2025-05-25 14:08:51,887 | INFO     | executing command: df -mP /tmp/boinchome/slots/15
[2025-05-25 10:09:06] 2025-05-25 14:08:51,951 | INFO     | sufficient remaining disk space (67618471936 B)
[2025-05-25 10:09:06] 2025-05-25 14:08:51,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 10:09:06] 2025-05-25 14:08:51,951 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 10:09:06] 2025-05-25 14:08:51,952 | INFO     | update_server=False
[2025-05-25 10:09:06] 2025-05-25 14:08:51,952 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 10:09:06] 2025-05-25 14:08:52,110 | INFO     | all data control threads have been joined
[2025-05-25 10:09:06] 2025-05-25 14:08:52,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 10:09:06] 2025-05-25 14:08:52,337 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 10:09:06] 2025-05-25 14:08:52,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 10:09:06] 2025-05-25 14:08:52,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 10:09:06] 2025-05-25 14:08:52,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 10:09:06] 2025-05-25 14:08:52,950 | INFO     | aborting loop
[2025-05-25 10:09:06] 2025-05-25 14:08:52,958 | INFO     | [job] retrieve thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:53,125 | INFO     | all job control threads have been joined
[2025-05-25 10:09:06] 2025-05-25 14:08:53,127 | INFO     | [data] control thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:53,226 | INFO     | all payload control threads have been joined
[2025-05-25 10:09:06] 2025-05-25 14:08:53,312 | INFO     | [job] validate thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:53,508 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 10:09:06] 2025-05-25 14:08:53,553 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:53,788 | INFO     | [data] copytool_in thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:53,788 | INFO     | [payload] validate_post thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:53,798 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:53,912 | INFO     | [payload] failed_post thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:53,962 | INFO     | [job] job monitor thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:54,132 | INFO     | [job] control thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:54,218 | INFO     | [data] copytool_out thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:54,232 | INFO     | [payload] control thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:54,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 10:09:06] 2025-05-25 14:08:54,351 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:54,443 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:55,281 | INFO     | [job] queue monitor thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:57,524 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 10:09:06] 2025-05-25 14:08:58,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660938991424)>', '<ExcThread(monitor, started 140660296374016)>']
[2025-05-25 10:09:06] 2025-05-25 14:08:59,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 10:09:06] 2025-05-25 14:08:59,388 | INFO     | [monitor] control thread has ended
[2025-05-25 10:09:06] 2025-05-25 14:09:03,576 | INFO     | all workflow threads have been joined
[2025-05-25 10:09:06] 2025-05-25 14:09:03,577 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 10:09:06] 2025-05-25 14:09:03,577 | INFO     | traces error code: 0
[2025-05-25 10:09:06] 2025-05-25 14:09:03,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 10:09:06] 2025-05-25 14:09:05,204 [wrapper] ==== pilot stdout END ====
[2025-05-25 10:09:06] 2025-05-25 14:09:05,226 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 10:09:06] 2025-05-25 14:09:05,249 [wrapper] pilotpid: 816375
[2025-05-25 10:09:06] 2025-05-25 14:09:05,305 [wrapper] Pilot exit status: 0
[2025-05-25 10:09:06] 2025-05-25 14:09:05,405 [wrapper] pandaids: 6665713854
[2025-05-25 10:09:06] 2025-05-25 14:09:06,505 [wrapper] cleanup supervisor_pilot 3768755 816376
[2025-05-25 10:09:06] 2025-05-25 14:09:06,537 [wrapper] Test setup, not cleaning
[2025-05-25 10:09:06] 2025-05-25 14:09:06,551 [wrapper] apfmon messages muted
[2025-05-25 10:09:06] 2025-05-25 14:09:06,578 [wrapper] ==== wrapper stdout END ====
[2025-05-25 10:09:06] 2025-05-25 14:09:06,591 [wrapper] ==== wrapper stderr END ====
[2025-05-25 10:09:06]  *** Error codes and diagnostics ***
[2025-05-25 10:09:07]     "exeErrorCode": 0,
[2025-05-25 10:09:07]     "exeErrorDiag": "",
[2025-05-25 10:09:07]     "pilotErrorCode": 0,
[2025-05-25 10:09:07]     "pilotErrorDiag": "",
[2025-05-25 10:09:07]  *** Listing of results directory ***
[2025-05-25 10:09:07] total 410840
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas    495897 May 24 21:48 pilot3.tar.gz
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas      5111 May 24 22:18 queuedata.json
[2025-05-25 10:09:07] -rwx------. 1 boincer umatlas     37140 May 24 22:18 runpilot2-wrapper.sh
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas       100 May 25 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 10:09:07] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 08:21 run_atlas
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas       105 May 25 08:21 job.xml
[2025-05-25 10:09:07] -rw-r--r--. 2 boincer umatlas 223374650 May 25 08:21 EVNT.44871834._001103.pool.root.1
[2025-05-25 10:09:07] -rw-r--r--. 2 boincer umatlas     15093 May 25 08:21 start_atlas.sh
[2025-05-25 10:09:07] drwxrwx--x. 2 boincer umatlas      4096 May 25 08:21 shared
[2025-05-25 10:09:07] -rw-r--r--. 2 boincer umatlas    508876 May 25 08:21 input.tar.gz
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas         0 May 25 08:21 boinc_lockfile
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas      2558 May 25 08:21 pandaJob.out
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas    990811 May 25 08:23 agis_schedconf.cvmfs.json
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas   1596740 May 25 08:23 agis_ddmendpoints.agis.ALL.json
[2025-05-25 10:09:07] drwx------. 4 boincer umatlas      4096 May 25 08:23 pilot3
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas      7160 May 25 10:00 init_data.xml
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas 191879810 May 25 10:07 HITS.44871837._027684.pool.root.1
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas       529 May 25 10:07 boinc_task_state.xml
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas      1034 May 25 10:08 memory_monitor_summary.json
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas    321397 May 25 10:08 log.44871837._027684.job.log.tgz.1
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas        95 May 25 10:08 pilot_heartbeat.json
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas      7694 May 25 10:08 heartbeat.json
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas      4354 May 25 10:09 pilotlog.txt
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas      8192 May 25 10:09 boinc_mmap_file
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas        27 May 25 10:09 wrapper_checkpoint.txt
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas    485024 May 25 10:09 log.44871837._027684.job.log.1
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas       357 May 25 10:09 output.list
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas       620 May 25 10:09 runtime_log
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas    829440 May 25 10:09 result.tar.gz
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas       651 May 25 10:09 RYKLDml7Fd7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8hNKDmIGQSFo.diag
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas      8668 May 25 10:09 runtime_log.err
[2025-05-25 10:09:07] -rw-r--r--. 1 boincer umatlas     22472 May 25 10:09 stderr.txt
[2025-05-25 10:09:07] HITS file was successfully produced:
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas 191879810 May 25 10:07 shared/HITS.pool.root.1
[2025-05-25 10:09:07]  *** Contents of shared directory: ***
[2025-05-25 10:09:07] total 406856
[2025-05-25 10:09:07] -rw-r--r--. 2 boincer umatlas 223374650 May 25 08:21 ATLAS.root_0
[2025-05-25 10:09:07] -rw-r--r--. 2 boincer umatlas     15093 May 25 08:21 start_atlas.sh
[2025-05-25 10:09:07] -rw-r--r--. 2 boincer umatlas    508876 May 25 08:21 input.tar.gz
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas 191879810 May 25 10:07 HITS.pool.root.1
[2025-05-25 10:09:07] -rw-------. 1 boincer umatlas    829440 May 25 10:09 result.tar.gz
10:09:08 (726318): run_atlas exited; CPU time 26637.648356
10:09:08 (726318): called boinc_finish(0)

</stderr_txt>
]]>

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