Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:00:19 (1067990): wrapper (7.7.26015): starting
08:00:19 (1067990): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 08:00:19] Arguments: --nthreads 8
[2025-05-25 08:00:19] Threads: 8
[2025-05-25 08:00:19] Checking for CVMFS
[2025-05-25 08:00:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 08:00:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 08:00:20] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 08:00:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 08:00:21] 2.12.6.0 7828 22881 493244 146401 0 937 22585399 32935937 27669 16776704 0 193138029 99.654 174850591 21711 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 08:00:21] CVMFS is ok
[2025-05-25 08:00:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 08:00:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 08:00:21] Further information can be found at the LHC@home message board.
[2025-05-25 08:00:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 08:00:21] Checking for apptainer binary...
[2025-05-25 08:00:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 08:00:21] Running /usr/bin/apptainer --version
[2025-05-25 08:00:21] apptainer version 1.4.1-1.el9
[2025-05-25 08:00:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 08:00:21] c7-3-29.aglt2.org
[2025-05-25 08:00:21] apptainer works
[2025-05-25 08:00:21] Set ATHENA_PROC_NUMBER=8
[2025-05-25 08:00:21] Set ATHENA_CORE_NUMBER=8
[2025-05-25 08:00:21] Starting ATLAS job with PandaID=6665714641
[2025-05-25 08:00:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 10:19:13]  *** The last 200 lines of the pilot log: ***
[2025-05-25 10:19:13] 2025-05-25 14:18:46,754 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 10:19:13] 2025-05-25 14:18:46,754 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 10:19:13] 2025-05-25 14:18:46,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 10:19:13] 2025-05-25 14:18:46,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 10:19:13] 2025-05-25 14:18:46,756 | INFO     | fitting pss+swap vs Time
[2025-05-25 10:19:13] 2025-05-25 14:18:46,756 | INFO     | sum of square deviations: 746067449.6492535
[2025-05-25 10:19:13] 2025-05-25 14:18:46,757 | INFO     | sum of deviations: 2614116094.783579
[2025-05-25 10:19:13] 2025-05-25 14:18:46,757 | INFO     | mean x: 1748178622.7089553
[2025-05-25 10:19:13] 2025-05-25 14:18:46,757 | INFO     | mean y: 2070336.0970149254
[2025-05-25 10:19:13] 2025-05-25 14:18:46,757 | INFO     | -- intersect: -6123303283.042277
[2025-05-25 10:19:13] 2025-05-25 14:18:46,757 | INFO     | intersect: -6123303283.042277
[2025-05-25 10:19:13] 2025-05-25 14:18:46,757 | INFO     | chi2: 3.195190402240678
[2025-05-25 10:19:13] 2025-05-25 14:18:46,757 | INFO     | sum of square deviations: 665621044.7596893
[2025-05-25 10:19:13] 2025-05-25 14:18:46,758 | INFO     | sum of deviations: 15709165591.860472
[2025-05-25 10:19:13] 2025-05-25 14:18:46,758 | INFO     | mean x: 1748178470.2015505
[2025-05-25 10:19:13] 2025-05-25 14:18:46,758 | INFO     | mean y: 2094549.6976744186
[2025-05-25 10:19:13] 2025-05-25 14:18:46,758 | INFO     | -- intersect: -41256254008.73213
[2025-05-25 10:19:13] 2025-05-25 14:18:46,758 | INFO     | intersect: -41256254008.73213
[2025-05-25 10:19:13] 2025-05-25 14:18:46,758 | INFO     | chi2: 1.8338777785109663
[2025-05-25 10:19:13] 2025-05-25 14:18:46,758 | INFO     | current chi2=1.8338777785109663 (change=42.60505485917426 %)
[2025-05-25 10:19:13] 2025-05-25 14:18:46,758 | INFO     | sum of square deviations: 591174630.3548379
[2025-05-25 10:19:13] 2025-05-25 14:18:46,759 | INFO     | sum of deviations: 14831311762.177416
[2025-05-25 10:19:13] 2025-05-25 14:18:46,759 | INFO     | mean x: 1748178317.6935484
[2025-05-25 10:19:13] 2025-05-25 14:18:46,759 | INFO     | mean y: 2092760.8467741935
[2025-05-25 10:19:13] 2025-05-25 14:18:46,759 | INFO     | -- intersect: -43855976097.807304
[2025-05-25 10:19:13] 2025-05-25 14:18:46,759 | INFO     | intersect: -43855976097.807304
[2025-05-25 10:19:13] 2025-05-25 14:18:46,759 | INFO     | chi2: 1.8361824244728746
[2025-05-25 10:19:13] 2025-05-25 14:18:46,759 | INFO     | current chi2=1.8361824244728746 (change=-0.12567064113615833 %)
[2025-05-25 10:19:13] 2025-05-25 14:18:46,759 | INFO     | right removable region: 123
[2025-05-25 10:19:13] 2025-05-25 14:18:46,765 | INFO     | sum of square deviations: 665620191.922479
[2025-05-25 10:19:13] 2025-05-25 14:18:46,765 | INFO     | sum of deviations: -16453801788.263569
[2025-05-25 10:19:13] 2025-05-25 14:18:46,765 | INFO     | mean x: 1748178775.2170544
[2025-05-25 10:19:13] 2025-05-25 14:18:46,765 | INFO     | mean y: 2105951.9379844964
[2025-05-25 10:19:13] 2025-05-25 14:18:46,765 | INFO     | -- intersect: 43216220257.56408
[2025-05-25 10:19:13] 2025-05-25 14:18:46,765 | INFO     | intersect: 43216220257.56408
[2025-05-25 10:19:13] 2025-05-25 14:18:46,766 | INFO     | chi2: 1.5798185888297542
[2025-05-25 10:19:13] 2025-05-25 14:18:46,766 | INFO     | current chi2=1.5798185888297542 (change=50.55635533576085 %)
[2025-05-25 10:19:13] 2025-05-25 14:18:46,766 | INFO     | sum of square deviations: 591173046.6774185
[2025-05-25 10:19:13] 2025-05-25 14:18:46,766 | INFO     | sum of deviations: -13800675435.032259
[2025-05-25 10:19:13] 2025-05-25 14:18:46,766 | INFO     | mean x: 1748178927.7258065
[2025-05-25 10:19:13] 2025-05-25 14:18:46,766 | INFO     | mean y: 2100329.8225806453
[2025-05-25 10:19:13] 2025-05-25 14:18:46,766 | INFO     | -- intersect: 40812570495.035095
[2025-05-25 10:19:13] 2025-05-25 14:18:46,766 | INFO     | intersect: 40812570495.035095
[2025-05-25 10:19:13] 2025-05-25 14:18:46,767 | INFO     | chi2: 1.5098854723931983
[2025-05-25 10:19:13] 2025-05-25 14:18:46,767 | INFO     | current chi2=1.5098854723931983 (change=4.426654866009566 %)
[2025-05-25 10:19:13] 2025-05-25 14:18:46,767 | INFO     | left removable region: 20
[2025-05-25 10:19:13] 2025-05-25 14:18:46,767 | INFO     | sum of square deviations: 338777673.3009708
[2025-05-25 10:19:13] 2025-05-25 14:18:46,767 | INFO     | sum of deviations: 1727681159.1262136
[2025-05-25 10:19:13] 2025-05-25 14:18:46,767 | INFO     | mean x: 1748178897.2135923
[2025-05-25 10:19:13] 2025-05-25 14:18:46,767 | INFO     | mean y: 2119656.7669902914
[2025-05-25 10:19:13] 2025-05-25 14:18:46,767 | INFO     | -- intersect: -8913154227.92826
[2025-05-25 10:19:13] 2025-05-25 14:18:46,767 | INFO     | intersect: -8913154227.92826
[2025-05-25 10:19:13] 2025-05-25 14:18:46,768 | INFO     | chi2: 0.03558269275954636
[2025-05-25 10:19:13] 2025-05-25 14:18:46,768 | INFO     | -- intersect: -8913154227.92826
[2025-05-25 10:19:13] 2025-05-25 14:18:46,768 | INFO     | current memory leak: 5.10 B/s (using 103 data points, chi2=0.04)
[2025-05-25 10:19:13] 2025-05-25 14:18:46,768 | INFO     | ..............................
[2025-05-25 10:19:13] 2025-05-25 14:18:46,768 | INFO     | . Timing measurements:
[2025-05-25 10:19:13] 2025-05-25 14:18:46,768 | INFO     | . get job = 0 s
[2025-05-25 10:19:13] 2025-05-25 14:18:46,768 | INFO     | . initial setup = 3 s
[2025-05-25 10:19:13] 2025-05-25 14:18:46,768 | INFO     | . payload setup = 39 s
[2025-05-25 10:19:13] 2025-05-25 14:18:46,768 | INFO     | . stage-in = 0 s
[2025-05-25 10:19:13] 2025-05-25 14:18:46,768 | INFO     | . payload execution = 8140 s
[2025-05-25 10:19:13] 2025-05-25 14:18:46,768 | INFO     | . stage-out = 2 s
[2025-05-25 10:19:13] 2025-05-25 14:18:46,779 | INFO     | . log creation = 0 s
[2025-05-25 10:19:13] 2025-05-25 14:18:46,779 | INFO     | ..............................
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | 
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | job summary report
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | --------------------------------------------------
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | PanDA job id: 6665714641
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | task id: 44871837
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | errors: (none)
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | pilot state: finished 
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | transexitcode: 0
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | exeerrorcode: 0
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | exeerrordiag: 
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | exitcode: 0
[2025-05-25 10:19:13] 2025-05-25 14:18:46,963 | INFO     | exitmsg: OK
[2025-05-25 10:19:13] 2025-05-25 14:18:46,964 | INFO     | cpuconsumptiontime: 39461 s
[2025-05-25 10:19:13] 2025-05-25 14:18:46,964 | INFO     | nevents: 400
[2025-05-25 10:19:13] 2025-05-25 14:18:46,964 | INFO     | neventsw: 0
[2025-05-25 10:19:13] 2025-05-25 14:18:46,964 | INFO     | pid: 1093272
[2025-05-25 10:19:13] 2025-05-25 14:18:46,964 | INFO     | pgrp: 1093272
[2025-05-25 10:19:13] 2025-05-25 14:18:46,964 | INFO     | corecount: 8
[2025-05-25 10:19:13] 2025-05-25 14:18:46,964 | INFO     | event service: False
[2025-05-25 10:19:13] 2025-05-25 14:18:46,964 | INFO     | sizes: {0: 2393568, 1: 2393767, 12: 2393767, 13: 2394001, 23: 2394057, 8184: 2421614, 8187: 2430555, 8189: 2430611, 8219: 2430781}
[2025-05-25 10:19:13] 2025-05-25 14:18:46,964 | INFO     | --------------------------------------------------
[2025-05-25 10:19:13] 2025-05-25 14:18:46,964 | INFO     | 
[2025-05-25 10:19:13] 2025-05-25 14:18:46,964 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-25 10:19:13] 2025-05-25 14:18:47,072 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,072 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,072 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,073 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,073 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,073 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,073 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,073 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,074 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 10:19:13] 2025-05-25 14:18:47,074 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,074 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 10:19:13] 2025-05-25 14:18:47,074 | INFO     | job 6665714641 has completed (purged errors)
[2025-05-25 10:19:13] 2025-05-25 14:18:47,074 | INFO     | overall cleanup function is called
[2025-05-25 10:19:13] 2025-05-25 14:18:48,105 | INFO     | --- collectZombieJob: --- 10, [1093272]
[2025-05-25 10:19:13] 2025-05-25 14:18:48,105 | INFO     | zombie collector waiting for pid 1093272
[2025-05-25 10:19:13] 2025-05-25 14:18:48,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 10:19:13] 2025-05-25 14:18:48,105 | INFO     | collected zombie processes
[2025-05-25 10:19:13] 2025-05-25 14:18:48,105 | INFO     | will attempt to kill all subprocesses of pid=1093272
[2025-05-25 10:19:13] 2025-05-25 14:18:50,378 | INFO     | PID=1081243 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 10:19:13] 2025-05-25 14:18:50,378 | INFO     | .. there are 44 such processes running
[2025-05-25 10:19:13] 2025-05-25 14:18:52,102 | INFO     | process IDs to be killed: [1093272] (in reverse order)
[2025-05-25 10:19:13] 2025-05-25 14:18:52,652 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 10:19:13] 2025-05-25 14:18:52,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 10:19:13] 2025-05-25 14:18:52,682 | INFO     | did not find any defunct processes belonging to 1093272
[2025-05-25 10:19:13] 2025-05-25 14:18:52,759 | INFO     | did not find any defunct processes belonging to 1093272
[2025-05-25 10:19:13] 2025-05-25 14:18:52,760 | INFO     | ready for new job
[2025-05-25 10:19:13] 2025-05-25 14:18:52,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 10:19:13] 2025-05-25 14:18:52,765 | INFO     | **************************************
[2025-05-25 10:19:13] 2025-05-25 14:18:52,765 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 10:19:13] 2025-05-25 14:18:52,766 | INFO     | **************************************
[2025-05-25 10:19:13] 2025-05-25 14:18:52,766 | INFO     | 
[2025-05-25 10:19:13] 2025-05-25 14:18:52,779 | INFO     | architecture information:
[2025-05-25 10:19:13] 2025-05-25 14:18:52,789 | INFO     | executing command: cat /etc/os-release
[2025-05-25 10:19:13] 2025-05-25 14:18:52,875 | INFO     | cat /etc/os-release:
[2025-05-25 10:19:13] NAME="CentOS Linux"
[2025-05-25 10:19:13] VERSION="7 (Core)"
[2025-05-25 10:19:13] ID="centos"
[2025-05-25 10:19:13] ID_LIKE="rhel fedora"
[2025-05-25 10:19:13] VERSION_ID="7"
[2025-05-25 10:19:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 10:19:13] ANSI_COLOR="0;31"
[2025-05-25 10:19:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 10:19:13] HOME_URL="https://www.centos.org/"
[2025-05-25 10:19:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 10:19:13] 
[2025-05-25 10:19:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 10:19:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 10:19:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 10:19:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 10:19:13] 
[2025-05-25 10:19:13] 2025-05-25 14:18:52,885 | INFO     | **************************************
[2025-05-25 10:19:13] 2025-05-25 14:18:53,406 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-25 10:19:13] 2025-05-25 14:18:53,593 | INFO     | sufficient remaining disk space (73789341696 B)
[2025-05-25 10:19:13] 2025-05-25 14:18:53,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 10:19:13] 2025-05-25 14:18:53,594 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 10:19:13] 2025-05-25 14:18:53,594 | INFO     | update_server=False
[2025-05-25 10:19:13] 2025-05-25 14:18:53,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 10:19:13] 2025-05-25 14:18:53,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 10:19:13] 2025-05-25 14:18:53,891 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 10:19:13] 2025-05-25 14:18:53,891 | INFO     | aborting loop
[2025-05-25 10:19:13] 2025-05-25 14:18:54,265 | INFO     | all payload control threads have been joined
[2025-05-25 10:19:13] 2025-05-25 14:18:54,398 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 10:19:13] 2025-05-25 14:18:54,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 10:19:13] 2025-05-25 14:18:54,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 10:19:13] 2025-05-25 14:18:54,586 | INFO     | all job control threads have been joined
[2025-05-25 10:19:13] 2025-05-25 14:18:54,610 | INFO     | [job] retrieve thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:54,670 | INFO     | all data control threads have been joined
[2025-05-25 10:19:13] 2025-05-25 14:18:54,897 | INFO     | [job] job monitor thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:54,989 | INFO     | [payload] failed_post thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:55,097 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:55,271 | INFO     | [payload] control thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:55,459 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 10:19:13] 2025-05-25 14:18:55,592 | INFO     | [job] control thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:55,603 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:55,603 | INFO     | [job] validate thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:55,614 | INFO     | [data] copytool_out thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:55,678 | INFO     | [data] control thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:55,688 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:55,805 | INFO     | [payload] validate_post thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:55,990 | INFO     | [data] copytool_in thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:56,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 10:19:13] 2025-05-25 14:18:57,112 | INFO     | [job] queue monitor thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:18:59,499 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:19:04,454 | INFO     | job.realtimelogging is not enabled
[2025-05-25 10:19:13] 2025-05-25 14:19:05,460 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 10:19:13] 2025-05-25 14:19:06,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140682337994560)>', '<ExcThread(monitor, started 140681242732288)>']
[2025-05-25 10:19:13] 2025-05-25 14:19:06,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 10:19:13] 2025-05-25 14:19:06,524 | INFO     | [monitor] control thread has ended
[2025-05-25 10:19:13] 2025-05-25 14:19:11,409 | INFO     | all workflow threads have been joined
[2025-05-25 10:19:13] 2025-05-25 14:19:11,409 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 10:19:13] 2025-05-25 14:19:11,409 | INFO     | traces error code: 0
[2025-05-25 10:19:13] 2025-05-25 14:19:11,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 10:19:13] 2025-05-25 14:19:12,320 [wrapper] ==== pilot stdout END ====
[2025-05-25 10:19:13] 2025-05-25 14:19:12,368 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 10:19:13] 2025-05-25 14:19:12,405 [wrapper] pilotpid: 1081243
[2025-05-25 10:19:13] 2025-05-25 14:19:12,442 [wrapper] Pilot exit status: 0
[2025-05-25 10:19:13] 2025-05-25 14:19:12,556 [wrapper] pandaids: 6665714641
[2025-05-25 10:19:13] 2025-05-25 14:19:12,795 [wrapper] cleanup supervisor_pilot 2465791 1081244
[2025-05-25 10:19:13] 2025-05-25 14:19:12,821 [wrapper] Test setup, not cleaning
[2025-05-25 10:19:13] 2025-05-25 14:19:12,870 [wrapper] apfmon messages muted
[2025-05-25 10:19:13] 2025-05-25 14:19:12,913 [wrapper] ==== wrapper stdout END ====
[2025-05-25 10:19:13] 2025-05-25 14:19:12,957 [wrapper] ==== wrapper stderr END ====
[2025-05-25 10:19:13]  *** Error codes and diagnostics ***
[2025-05-25 10:19:13]     "exeErrorCode": 0,
[2025-05-25 10:19:13]     "exeErrorDiag": "",
[2025-05-25 10:19:13]     "pilotErrorCode": 0,
[2025-05-25 10:19:13]     "pilotErrorDiag": "",
[2025-05-25 10:19:13]  *** Listing of results directory ***
[2025-05-25 10:19:13] total 417844
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas    495897 May 24 22:29 pilot3.tar.gz
[2025-05-25 10:19:13] -rwx------. 1 boincer umatlas     37140 May 24 22:49 runpilot2-wrapper.sh
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas      5111 May 24 22:49 queuedata.json
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas       100 May 25 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 10:19:13] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 08:00 run_atlas
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas       105 May 25 08:00 job.xml
[2025-05-25 10:19:13] -rw-r--r--. 2 boincer umatlas 222542786 May 25 08:00 EVNT.44871834._001112.pool.root.1
[2025-05-25 10:19:13] drwxrwx--x. 2 boincer umatlas      4096 May 25 08:00 shared
[2025-05-25 10:19:13] -rw-r--r--. 2 boincer umatlas    508870 May 25 08:00 input.tar.gz
[2025-05-25 10:19:13] -rw-r--r--. 2 boincer umatlas     15093 May 25 08:00 start_atlas.sh
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas         0 May 25 08:00 boinc_lockfile
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas      2558 May 25 08:00 pandaJob.out
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas    990811 May 25 08:01 agis_schedconf.cvmfs.json
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas   1596740 May 25 08:01 agis_ddmendpoints.agis.ALL.json
[2025-05-25 10:19:13] drwx------. 4 boincer umatlas      4096 May 25 08:01 pilot3
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas      6933 May 25 10:11 init_data.xml
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas 199510654 May 25 10:16 HITS.44871837._027892.pool.root.1
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas       529 May 25 10:16 boinc_task_state.xml
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas      1033 May 25 10:18 memory_monitor_summary.json
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas        95 May 25 10:18 pilot_heartbeat.json
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas    321751 May 25 10:18 log.44871837._027892.job.log.tgz.1
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas      7681 May 25 10:18 heartbeat.json
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas      8192 May 25 10:19 boinc_mmap_file
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas      4425 May 25 10:19 pilotlog.txt
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas        27 May 25 10:19 wrapper_checkpoint.txt
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas    672233 May 25 10:19 log.44871837._027892.job.log.1
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas       357 May 25 10:19 output.list
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas       620 May 25 10:19 runtime_log
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas   1013760 May 25 10:19 result.tar.gz
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas      8654 May 25 10:19 runtime_log.err
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas       651 May 25 10:19 CNmKDmibGd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbETKDmX26OBo.diag
[2025-05-25 10:19:13] -rw-r--r--. 1 boincer umatlas     20971 May 25 10:19 stderr.txt
[2025-05-25 10:19:13] HITS file was successfully produced:
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas 199510654 May 25 10:16 shared/HITS.pool.root.1
[2025-05-25 10:19:13]  *** Contents of shared directory: ***
[2025-05-25 10:19:13] total 413676
[2025-05-25 10:19:13] -rw-r--r--. 2 boincer umatlas 222542786 May 25 08:00 ATLAS.root_0
[2025-05-25 10:19:13] -rw-r--r--. 2 boincer umatlas    508870 May 25 08:00 input.tar.gz
[2025-05-25 10:19:13] -rw-r--r--. 2 boincer umatlas     15093 May 25 08:00 start_atlas.sh
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas 199510654 May 25 10:16 HITS.pool.root.1
[2025-05-25 10:19:13] -rw-------. 1 boincer umatlas   1013760 May 25 10:19 result.tar.gz
10:19:35 (1067990): run_atlas exited; CPU time 39691.031184
10:19:35 (1067990): called boinc_finish(0)

</stderr_txt>
]]>

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