Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:29:26 (2890490): wrapper (7.7.26015): starting
07:29:26 (2890490): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 07:29:26] Arguments: --nthreads 8
[2025-05-25 07:29:26] Threads: 8
[2025-05-25 07:29:26] Checking for CVMFS
[2025-05-25 07:29:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 07:29:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 07:29:26] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 07:29:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 07:29:27] 2.12.6.0 7887 22850 521468 146401 2 570 17985564 32935936 36710 16776704 0 223672736 99.692 180525447 22739 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 07:29:27] CVMFS is ok
[2025-05-25 07:29:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 07:29:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 07:29:27] Further information can be found at the LHC@home message board.
[2025-05-25 07:29:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 07:29:27] Checking for apptainer binary...
[2025-05-25 07:29:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 07:29:27] Running /usr/bin/apptainer --version
[2025-05-25 07:29:27] apptainer version 1.4.1-1.el9
[2025-05-25 07:29:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 07:29:27] c7-3-28.aglt2.org
[2025-05-25 07:29:27] apptainer works
[2025-05-25 07:29:27] Set ATHENA_PROC_NUMBER=8
[2025-05-25 07:29:27] Set ATHENA_CORE_NUMBER=8
[2025-05-25 07:29:27] Starting ATLAS job with PandaID=6665713511
[2025-05-25 07:29:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 12:09:39]  *** The last 200 lines of the pilot log: ***
[2025-05-25 12:09:39] 2025-05-25 16:09:20,563 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6665713511/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 12:09:39] 2025-05-25 16:09:20,564 | INFO     | extracted standard info from prmon json
[2025-05-25 12:09:39] 2025-05-25 16:09:20,564 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 12:09:39] 2025-05-25 16:09:20,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 12:09:39] 2025-05-25 16:09:20,564 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 12:09:39] 2025-05-25 16:09:20,564 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 12:09:39] 2025-05-25 16:09:20,600 | INFO     | fitting pss+swap vs Time
[2025-05-25 12:09:39] 2025-05-25 16:09:20,600 | INFO     | sum of square deviations: 6309469202.24909
[2025-05-25 12:09:39] 2025-05-25 16:09:20,611 | INFO     | sum of deviations: -88193394643.41399
[2025-05-25 12:09:39] 2025-05-25 16:09:20,611 | INFO     | mean x: 1748180958.2161171
[2025-05-25 12:09:39] 2025-05-25 16:09:20,612 | INFO     | mean y: 2141348.684981685
[2025-05-25 12:09:39] 2025-05-25 16:09:20,612 | INFO     | -- intersect: 24438113411.29477
[2025-05-25 12:09:39] 2025-05-25 16:09:20,612 | INFO     | intersect: 24438113411.29477
[2025-05-25 12:09:39] 2025-05-25 16:09:20,612 | INFO     | chi2: 4.293020368719634
[2025-05-25 12:09:39] 2025-05-25 16:09:20,612 | INFO     | sum of square deviations: 5969112868.876883
[2025-05-25 12:09:39] 2025-05-25 16:09:20,614 | INFO     | sum of deviations: -47740104151.238815
[2025-05-25 12:09:39] 2025-05-25 16:09:20,614 | INFO     | mean x: 1748180805.7126865
[2025-05-25 12:09:39] 2025-05-25 16:09:20,614 | INFO     | mean y: 2159346.776119403
[2025-05-25 12:09:39] 2025-05-25 16:09:20,614 | INFO     | -- intersect: 13983857393.578732
[2025-05-25 12:09:39] 2025-05-25 16:09:20,614 | INFO     | intersect: 13983857393.578732
[2025-05-25 12:09:39] 2025-05-25 16:09:20,614 | INFO     | chi2: 2.67539650479277
[2025-05-25 12:09:39] 2025-05-25 16:09:20,615 | INFO     | current chi2=2.67539650479277 (change=37.680321195618035 %)
[2025-05-25 12:09:39] 2025-05-25 16:09:20,615 | INFO     | sum of square deviations: 5641254338.646371
[2025-05-25 12:09:39] 2025-05-25 16:09:20,616 | INFO     | sum of deviations: -43847100941.25478
[2025-05-25 12:09:39] 2025-05-25 16:09:20,616 | INFO     | mean x: 1748180653.21673
[2025-05-25 12:09:39] 2025-05-25 16:09:20,616 | INFO     | mean y: 2161150.2851711027
[2025-05-25 12:09:39] 2025-05-25 16:09:20,616 | INFO     | -- intersect: 13590035222.904211
[2025-05-25 12:09:39] 2025-05-25 16:09:20,617 | INFO     | intersect: 13590035222.904211
[2025-05-25 12:09:39] 2025-05-25 16:09:20,621 | INFO     | chi2: 2.674808069888841
[2025-05-25 12:09:39] 2025-05-25 16:09:20,621 | INFO     | current chi2=2.674808069888841 (change=0.02199430637196267 %)
[2025-05-25 12:09:39] 2025-05-25 16:09:20,622 | INFO     | right removable region: 262
[2025-05-25 12:09:39] 2025-05-25 16:09:20,622 | INFO     | sum of square deviations: 5969109942.011156
[2025-05-25 12:09:39] 2025-05-25 16:09:20,623 | INFO     | sum of deviations: -135287507799.41786
[2025-05-25 12:09:39] 2025-05-25 16:09:20,624 | INFO     | mean x: 1748181110.7201493
[2025-05-25 12:09:39] 2025-05-25 16:09:20,624 | INFO     | mean y: 2162328.447761194
[2025-05-25 12:09:39] 2025-05-25 16:09:20,624 | INFO     | -- intersect: 39623993380.140785
[2025-05-25 12:09:39] 2025-05-25 16:09:20,624 | INFO     | intersect: 39623993380.140785
[2025-05-25 12:09:39] 2025-05-25 16:09:20,624 | INFO     | chi2: 2.282512863849406
[2025-05-25 12:09:39] 2025-05-25 16:09:20,624 | INFO     | current chi2=2.282512863849406 (change=46.83200479362852 %)
[2025-05-25 12:09:39] 2025-05-25 16:09:20,624 | INFO     | sum of square deviations: 5641216031.764231
[2025-05-25 12:09:39] 2025-05-25 16:09:20,633 | INFO     | sum of deviations: -131107465734.45625
[2025-05-25 12:09:39] 2025-05-25 16:09:20,633 | INFO     | mean x: 1748181263.2243347
[2025-05-25 12:09:39] 2025-05-25 16:09:20,633 | INFO     | mean y: 2160349.8212927757
[2025-05-25 12:09:39] 2025-05-25 16:09:20,633 | INFO     | -- intersect: 40631629913.6953
[2025-05-25 12:09:39] 2025-05-25 16:09:20,633 | INFO     | intersect: 40631629913.6953
[2025-05-25 12:09:39] 2025-05-25 16:09:20,634 | INFO     | chi2: 2.244697346740327
[2025-05-25 12:09:39] 2025-05-25 16:09:20,634 | INFO     | current chi2=2.244697346740327 (change=1.6567493532239643 %)
[2025-05-25 12:09:39] 2025-05-25 16:09:20,634 | INFO     | left removable region: 20
[2025-05-25 12:09:39] 2025-05-25 16:09:20,634 | INFO     | sum of square deviations: 4395013203.999965
[2025-05-25 12:09:39] 2025-05-25 16:09:20,635 | INFO     | sum of deviations: -67349704286.72728
[2025-05-25 12:09:39] 2025-05-25 16:09:20,636 | INFO     | mean x: 1748181232.7272727
[2025-05-25 12:09:39] 2025-05-25 16:09:20,636 | INFO     | mean y: 2172015.458677686
[2025-05-25 12:09:39] 2025-05-25 16:09:20,636 | INFO     | -- intersect: 26791508838.527103
[2025-05-25 12:09:39] 2025-05-25 16:09:20,636 | INFO     | intersect: 26791508838.527103
[2025-05-25 12:09:39] 2025-05-25 16:09:20,636 | INFO     | chi2: 0.5420194515979817
[2025-05-25 12:09:39] 2025-05-25 16:09:20,636 | INFO     | -- intersect: 26791508838.527103
[2025-05-25 12:09:39] 2025-05-25 16:09:20,636 | INFO     | current memory leak: -15.32 B/s (using 242 data points, chi2=0.54)
[2025-05-25 12:09:39] 2025-05-25 16:09:20,637 | INFO     | ..............................
[2025-05-25 12:09:39] 2025-05-25 16:09:20,637 | INFO     | . Timing measurements:
[2025-05-25 12:09:39] 2025-05-25 16:09:20,637 | INFO     | . get job = 0 s
[2025-05-25 12:09:39] 2025-05-25 16:09:20,637 | INFO     | . initial setup = 3 s
[2025-05-25 12:09:39] 2025-05-25 16:09:20,637 | INFO     | . payload setup = 18 s
[2025-05-25 12:09:39] 2025-05-25 16:09:20,637 | INFO     | . stage-in = 0 s
[2025-05-25 12:09:39] 2025-05-25 16:09:20,637 | INFO     | . payload execution = 16659 s
[2025-05-25 12:09:39] 2025-05-25 16:09:20,637 | INFO     | . stage-out = 7 s
[2025-05-25 12:09:39] 2025-05-25 16:09:20,637 | INFO     | . log creation = 0 s
[2025-05-25 12:09:39] 2025-05-25 16:09:20,637 | INFO     | ..............................
[2025-05-25 12:09:39] 2025-05-25 16:09:21,376 | INFO     | 
[2025-05-25 12:09:39] 2025-05-25 16:09:21,376 | INFO     | job summary report
[2025-05-25 12:09:39] 2025-05-25 16:09:21,376 | INFO     | --------------------------------------------------
[2025-05-25 12:09:39] 2025-05-25 16:09:21,376 | INFO     | PanDA job id: 6665713511
[2025-05-25 12:09:39] 2025-05-25 16:09:21,376 | INFO     | task id: 44871837
[2025-05-25 12:09:39] 2025-05-25 16:09:21,376 | INFO     | errors: (none)
[2025-05-25 12:09:39] 2025-05-25 16:09:21,376 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 12:09:39] 2025-05-25 16:09:21,376 | INFO     | pilot state: finished 
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | transexitcode: 0
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | exeerrorcode: 0
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | exeerrordiag: 
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | exitcode: 0
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | exitmsg: OK
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | cpuconsumptiontime: 41661 s
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | nevents: 400
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | neventsw: 0
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | pid: 2919479
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | pgrp: 2919479
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | corecount: 8
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | event service: False
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | sizes: {0: 2393684, 11: 2393684, 14: 2393918, 22: 2393946, 16683: 2424966, 16684: 2424965, 16692: 2434146, 16729: 2434260}
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | --------------------------------------------------
[2025-05-25 12:09:39] 2025-05-25 16:09:21,377 | INFO     | 
[2025-05-25 12:09:39] 2025-05-25 16:09:21,378 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-05-25 12:09:39] 2025-05-25 16:09:21,595 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,595 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,595 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,595 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,596 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,596 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,596 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,596 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,597 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 12:09:39] 2025-05-25 16:09:21,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,597 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 12:09:39] 2025-05-25 16:09:21,597 | INFO     | job 6665713511 has completed (purged errors)
[2025-05-25 12:09:39] 2025-05-25 16:09:21,597 | INFO     | overall cleanup function is called
[2025-05-25 12:09:39] 2025-05-25 16:09:22,631 | INFO     | --- collectZombieJob: --- 10, [2919479]
[2025-05-25 12:09:39] 2025-05-25 16:09:22,631 | INFO     | zombie collector waiting for pid 2919479
[2025-05-25 12:09:39] 2025-05-25 16:09:22,631 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 12:09:39] 2025-05-25 16:09:22,631 | INFO     | collected zombie processes
[2025-05-25 12:09:39] 2025-05-25 16:09:22,631 | INFO     | will attempt to kill all subprocesses of pid=2919479
[2025-05-25 12:09:39] 2025-05-25 16:09:26,028 | INFO     | process IDs to be killed: [2919479] (in reverse order)
[2025-05-25 12:09:39] 2025-05-25 16:09:26,536 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 12:09:39] 2025-05-25 16:09:26,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 12:09:39] 2025-05-25 16:09:26,669 | INFO     | did not find any defunct processes belonging to 2919479
[2025-05-25 12:09:39] 2025-05-25 16:09:26,769 | INFO     | did not find any defunct processes belonging to 2919479
[2025-05-25 12:09:39] 2025-05-25 16:09:26,769 | INFO     | ready for new job
[2025-05-25 12:09:39] 2025-05-25 16:09:26,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 12:09:39] 2025-05-25 16:09:26,786 | INFO     | **************************************
[2025-05-25 12:09:39] 2025-05-25 16:09:26,787 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 12:09:39] 2025-05-25 16:09:26,787 | INFO     | **************************************
[2025-05-25 12:09:39] 2025-05-25 16:09:26,787 | INFO     | 
[2025-05-25 12:09:39] 2025-05-25 16:09:26,834 | INFO     | architecture information:
[2025-05-25 12:09:39] 2025-05-25 16:09:26,859 | INFO     | executing command: cat /etc/os-release
[2025-05-25 12:09:39] 2025-05-25 16:09:26,915 | INFO     | cat /etc/os-release:
[2025-05-25 12:09:39] NAME="CentOS Linux"
[2025-05-25 12:09:39] VERSION="7 (Core)"
[2025-05-25 12:09:39] ID="centos"
[2025-05-25 12:09:39] ID_LIKE="rhel fedora"
[2025-05-25 12:09:39] VERSION_ID="7"
[2025-05-25 12:09:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 12:09:39] ANSI_COLOR="0;31"
[2025-05-25 12:09:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 12:09:39] HOME_URL="https://www.centos.org/"
[2025-05-25 12:09:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 12:09:39] 
[2025-05-25 12:09:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 12:09:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 12:09:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 12:09:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 12:09:39] 
[2025-05-25 12:09:39] 2025-05-25 16:09:26,915 | INFO     | **************************************
[2025-05-25 12:09:39] 2025-05-25 16:09:27,423 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-05-25 12:09:39] 2025-05-25 16:09:27,517 | INFO     | sufficient remaining disk space (74069311488 B)
[2025-05-25 12:09:39] 2025-05-25 16:09:27,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 12:09:39] 2025-05-25 16:09:27,518 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 12:09:39] 2025-05-25 16:09:27,518 | INFO     | update_server=False
[2025-05-25 12:09:39] 2025-05-25 16:09:27,518 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 12:09:39] 2025-05-25 16:09:27,518 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 12:09:39] 2025-05-25 16:09:27,522 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 12:09:39] 2025-05-25 16:09:27,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 12:09:39] 2025-05-25 16:09:27,523 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 12:09:39] 2025-05-25 16:09:27,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 12:09:39] 2025-05-25 16:09:27,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 12:09:39] 2025-05-25 16:09:27,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 12:09:39] 2025-05-25 16:09:27,523 | INFO     | aborting loop
[2025-05-25 12:09:39] 2025-05-25 16:09:27,537 | INFO     | all job control threads have been joined
[2025-05-25 12:09:39] 2025-05-25 16:09:27,690 | INFO     | all data control threads have been joined
[2025-05-25 12:09:39] 2025-05-25 16:09:28,528 | INFO     | [job] retrieve thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:28,529 | INFO     | [job] job monitor thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:28,545 | INFO     | [job] control thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:28,633 | INFO     | all payload control threads have been joined
[2025-05-25 12:09:39] 2025-05-25 16:09:28,683 | INFO     | [data] copytool_in thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:28,694 | INFO     | [payload] validate_post thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:28,696 | INFO     | [data] control thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:29,425 | INFO     | [payload] failed_post thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:29,493 | INFO     | [job] validate thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:29,508 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:29,510 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:29,530 | INFO     | [data] copytool_out thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:29,639 | INFO     | [payload] control thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:30,012 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:30,013 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:30,023 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 12:09:39] 2025-05-25 16:09:31,029 | INFO     | [job] queue monitor thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:31,532 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 12:09:39] 2025-05-25 16:09:32,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566544791360)>', '<ExcThread(monitor, started 140566201353984)>']
[2025-05-25 12:09:39] 2025-05-25 16:09:32,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 12:09:39] 2025-05-25 16:09:32,552 | INFO     | [monitor] control thread has ended
[2025-05-25 12:09:39] 2025-05-25 16:09:37,045 | INFO     | all workflow threads have been joined
[2025-05-25 12:09:39] 2025-05-25 16:09:37,045 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 12:09:39] 2025-05-25 16:09:37,045 | INFO     | traces error code: 0
[2025-05-25 12:09:39] 2025-05-25 16:09:37,046 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 12:09:39] 2025-05-25 16:09:37,759 [wrapper] ==== pilot stdout END ====
[2025-05-25 12:09:39] 2025-05-25 16:09:37,809 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 12:09:39] 2025-05-25 16:09:37,826 [wrapper] pilotpid: 2899355
[2025-05-25 12:09:39] 2025-05-25 16:09:37,860 [wrapper] Pilot exit status: 0
[2025-05-25 12:09:39] 2025-05-25 16:09:38,010 [wrapper] pandaids: 6665713511
[2025-05-25 12:09:39] 2025-05-25 16:09:38,232 [wrapper] cleanup supervisor_pilot 2999907 2899356
[2025-05-25 12:09:39] 2025-05-25 16:09:38,269 [wrapper] Test setup, not cleaning
[2025-05-25 12:09:39] 2025-05-25 16:09:38,297 [wrapper] apfmon messages muted
[2025-05-25 12:09:39] 2025-05-25 16:09:38,324 [wrapper] ==== wrapper stdout END ====
[2025-05-25 12:09:39] 2025-05-25 16:09:38,369 [wrapper] ==== wrapper stderr END ====
[2025-05-25 12:09:39]  *** Error codes and diagnostics ***
[2025-05-25 12:09:39]     "exeErrorCode": 0,
[2025-05-25 12:09:39]     "exeErrorDiag": "",
[2025-05-25 12:09:39]     "pilotErrorCode": 0,
[2025-05-25 12:09:39]     "pilotErrorDiag": "",
[2025-05-25 12:09:39]  *** Listing of results directory ***
[2025-05-25 12:09:39] total 425232
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas    495897 May 24 21:48 pilot3.tar.gz
[2025-05-25 12:09:39] -rwx------. 1 boincer umatlas     37140 May 24 21:58 runpilot2-wrapper.sh
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas      5111 May 24 21:58 queuedata.json
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas       100 May 25 07:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 12:09:39] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 07:29 run_atlas
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas       105 May 25 07:29 job.xml
[2025-05-25 12:09:39] -rw-r--r--. 2 boincer umatlas 223427838 May 25 07:29 EVNT.44871834._001096.pool.root.1
[2025-05-25 12:09:39] -rw-r--r--. 2 boincer umatlas     15093 May 25 07:29 start_atlas.sh
[2025-05-25 12:09:39] drwxrwx--x. 2 boincer umatlas      4096 May 25 07:29 shared
[2025-05-25 12:09:39] -rw-r--r--. 2 boincer umatlas    508880 May 25 07:29 input.tar.gz
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas         0 May 25 07:29 boinc_lockfile
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas      2555 May 25 07:29 pandaJob.out
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas    990811 May 25 07:29 agis_schedconf.cvmfs.json
[2025-05-25 12:09:39] drwx------. 4 boincer umatlas      4096 May 25 07:29 pilot3
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas      6933 May 25 12:04 init_data.xml
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas 204912329 May 25 12:05 HITS.44871837._027490.pool.root.1
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas       530 May 25 12:05 boinc_task_state.xml
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas      1037 May 25 12:08 memory_monitor_summary.json
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas   1596740 May 25 12:08 agis_ddmendpoints.agis.ALL.json
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas    390840 May 25 12:08 log.44871837._027490.job.log.tgz.1
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas      7697 May 25 12:09 heartbeat.json
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas        95 May 25 12:09 pilot_heartbeat.json
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas      4476 May 25 12:09 pilotlog.txt
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas      8192 May 25 12:09 boinc_mmap_file
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas        28 May 25 12:09 wrapper_checkpoint.txt
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas   1242416 May 25 12:09 log.44871837._027490.job.log.1
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas       357 May 25 12:09 output.list
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas       620 May 25 12:09 runtime_log
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas   1648640 May 25 12:09 result.tar.gz
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas      8655 May 25 12:09 runtime_log.err
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas       654 May 25 12:09 2yFODmgoFd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmn9SKDmKyE1cm.diag
[2025-05-25 12:09:39] -rw-r--r--. 1 boincer umatlas     20940 May 25 12:09 stderr.txt
[2025-05-25 12:09:39] HITS file was successfully produced:
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas 204912329 May 25 12:05 shared/HITS.pool.root.1
[2025-05-25 12:09:39]  *** Contents of shared directory: ***
[2025-05-25 12:09:39] total 420440
[2025-05-25 12:09:39] -rw-r--r--. 2 boincer umatlas 223427838 May 25 07:29 ATLAS.root_0
[2025-05-25 12:09:39] -rw-r--r--. 2 boincer umatlas     15093 May 25 07:29 start_atlas.sh
[2025-05-25 12:09:39] -rw-r--r--. 2 boincer umatlas    508880 May 25 07:29 input.tar.gz
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas 204912329 May 25 12:05 HITS.pool.root.1
[2025-05-25 12:09:39] -rw-------. 1 boincer umatlas   1648640 May 25 12:09 result.tar.gz
12:09:41 (2890490): run_atlas exited; CPU time 42378.706903
12:09:41 (2890490): called boinc_finish(0)

</stderr_txt>
]]>

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