Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-26 00:26:55 (94644): Detected: vboxwrapper 26206
2025-05-26 00:26:55 (94644): Detected: BOINC client v8.0.4
2025-05-26 00:26:55 (94644): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-05-26 00:26:55 (94644): Successfully copied 'init_data.xml' to the shared directory.
2025-05-26 00:26:55 (94644): Create VM. (boinc_2a52256fc6c4cf0a, slot#5)
2025-05-26 00:26:55 (94644): Setting Memory Size for VM. (4800MB)
2025-05-26 00:26:55 (94644): Setting CPU Count for VM. (8)
2025-05-26 00:26:55 (94644): Setting Chipset Options for VM.
2025-05-26 00:26:55 (94644): Setting Graphics Controller Options for VM.
2025-05-26 00:26:55 (94644): Setting Boot Options for VM.
2025-05-26 00:26:55 (94644): Setting Network Configuration for NAT.
2025-05-26 00:26:55 (94644): Enabling VM Network Access.
2025-05-26 00:26:56 (94644): Disabling USB Support for VM.
2025-05-26 00:26:56 (94644): Disabling COM Port Support for VM.
2025-05-26 00:26:56 (94644): Disabling LPT Port Support for VM.
2025-05-26 00:26:56 (94644): Disabling Audio Support for VM.
2025-05-26 00:26:56 (94644): Disabling Clipboard Support for VM.
2025-05-26 00:26:56 (94644): Disabling Drag and Drop Support for VM.
2025-05-26 00:26:56 (94644): Adding storage controller(s) to VM.
2025-05-26 00:26:56 (94644): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-26 00:26:57 (94644): Adding VirtualBox Guest Additions to VM.
2025-05-26 00:26:57 (94644): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-26 00:26:57 (94644): forwarding host port 54487 to guest port 80
2025-05-26 00:26:58 (94644): Enabling remote desktop for VM.
2025-05-26 00:26:58 (94644): Required extension pack not installed, remote desktop not enabled.
2025-05-26 00:26:58 (94644): Enabling shared directory for VM.
2025-05-26 00:26:58 (94644): Starting VM using VBoxManage interface. (boinc_2a52256fc6c4cf0a, slot#5)
2025-05-26 00:26:59 (94644): Successfully started VM. (PID = '95224')
2025-05-26 00:26:59 (94644): Reporting VM Process ID to BOINC.
2025-05-26 00:26:59 (94644): Guest Log: BIOS: VirtualBox 7.1.8
2025-05-26 00:26:59 (94644): Guest Log: CPUID EDX: 0x178bfbff
2025-05-26 00:26:59 (94644): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-26 00:26:59 (94644): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-26 00:26:59 (94644): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-26 00:26:59 (94644): Detected: Web Application Enabled (http://localhost:54487)
2025-05-26 00:26:59 (94644): Preference change detected
2025-05-26 00:26:59 (94644): Setting CPU throttle for VM. (100%)
2025-05-26 00:26:59 (94644): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-26 00:27:01 (94644): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-26 00:27:01 (94644): Guest Log: BIOS: Booting from Hard Disk...
2025-05-26 00:27:04 (94644): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-26 00:27:04 (94644): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-26 00:27:04 (94644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-26 00:27:14 (94644): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-26 00:27:14 (94644): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-26 00:27:21 (94644): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-26 00:27:21 (94644): Guest Log: 00:00:00.000344 main     Log opened 2025-05-25T15:27:19.165074000Z
2025-05-26 00:27:21 (94644): Guest Log: 00:00:00.000550 main     OS Product: Linux
2025-05-26 00:27:21 (94644): Guest Log: 00:00:00.000618 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-26 00:27:21 (94644): Guest Log: 00:00:00.000672 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-26 00:27:21 (94644): Guest Log: 00:00:00.000726 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-26 00:27:21 (94644): Guest Log: 00:00:00.000727 main     Process ID: 1373
2025-05-26 00:27:21 (94644): Guest Log: 00:00:00.000728 main     Package type: LINUX_64BITS_GENERIC
2025-05-26 00:27:21 (94644): Guest Log: 00:00:00.003939 main     5.2.32 r132073 started. Verbose level = 0
2025-05-26 00:27:22 (94644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-26 00:27:22 (94644): Guest Log: [INFO] Mounting shared directory
2025-05-26 00:27:22 (94644): Guest Log: [INFO] Checking for init_data.xml
2025-05-26 00:27:40 (94644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-26 00:27:40 (94644): Guest Log: [INFO] Detected branch: prod
2025-05-26 00:27:41 (94644): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-26 00:27:41 (94644): Guest Log: Copying input files
2025-05-26 00:27:41 (94644): Guest Log: Copied input files into RunAtlas.
2025-05-26 00:27:41 (94644): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-26 00:27:41 (94644): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-26 00:27:41 (94644): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-26 00:27:41 (94644): Guest Log: Further information can be found at the LHC@home message board.
2025-05-26 00:27:52 (94644): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-26 00:27:53 (94644): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-26 00:27:53 (94644): Guest Log: 2.6.3.0 1654 0 30164 146407 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-26 00:27:54 (94644): Guest Log: copied the webapp to /var/www
2025-05-26 00:27:54 (94644): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-26 00:27:54 (94644): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-26 00:27:56 (94644): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-26 00:27:56 (94644): Guest Log:  *** Starting ATLAS job. (PandaID=6665687090 taskID=44871837) ***
2025-05-26 02:06:00 (94644): Status Report: Elapsed Time: '6000.000000'
2025-05-26 02:06:00 (94644): Status Report: CPU Time: '42515.870000'
2025-05-26 03:45:00 (94644): Status Report: Elapsed Time: '12000.000000'
2025-05-26 03:45:00 (94644): Status Report: CPU Time: '89796.920000'
2025-05-26 04:18:10 (94644): Guest Log:  *** Job finished ***
2025-05-26 04:18:10 (94644): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:17:51,501 | INFO     | [data] queue_monitor thread has finished
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:17:57,255 | INFO     | job.realtimelogging is not enabled
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:17:58,256 | INFO     | [payload] run_realtimelog thread has finished
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:17:59,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632060221248)>', '<ExcThread(monitor, started 139631265838848)>']
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:17:59,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:17:59,905 | INFO     | [monitor] control thread has ended
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:04,290 | INFO     | all workflow threads have been joined
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:04,290 | INFO     | end of generic workflow (traces error code: 0)
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:04,291 | INFO     | traces error code: 0
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:04,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:04,428 [wrapper] ==== pilot stdout END ====
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:04,441 [wrapper] ==== wrapper stdout RESUME ====
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:04,453 [wrapper] pilotpid: 6019
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:04,465 [wrapper] Pilot exit status: 0
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:06,392 [wrapper] pandaids: 6665687090
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:06,490 [wrapper] cleanup supervisor_pilot 14363 6020
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:06,503 [wrapper] Test setup, not cleaning
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:06,516 [wrapper] apfmon messages muted
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:06,529 [wrapper] ==== wrapper stdout END ====
2025-05-26 04:18:10 (94644): Guest Log: 2025-05-25 19:18:06,541 [wrapper] ==== wrapper stderr END ====
2025-05-26 04:18:10 (94644): Guest Log:  *** Error codes and diagnostics ***
2025-05-26 04:18:10 (94644): Guest Log:     "exeErrorCode": 0,
2025-05-26 04:18:10 (94644): Guest Log:     "exeErrorDiag": "",
2025-05-26 04:18:10 (94644): Guest Log:     "pilotErrorCode": 0,
2025-05-26 04:18:10 (94644): Guest Log:     "pilotErrorDiag": "",
2025-05-26 04:18:10 (94644): Guest Log:  *** Listing of results directory ***
2025-05-26 04:18:10 (94644): Guest Log: total 196260
2025-05-26 04:18:10 (94644): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 25 01:34 pilot3.tar.gz
2025-05-26 04:18:10 (94644): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 25 01:42 queuedata.json
2025-05-26 04:18:10 (94644): Guest Log: -rwx------. 1 atlas atlas     37140 May 25 01:45 runpilot2-wrapper.sh
2025-05-26 04:18:10 (94644): Guest Log: -rw-r--r--. 1 atlas atlas    508879 May 25 15:27 input.tar.gz
2025-05-26 04:18:10 (94644): Guest Log: -rw-r--r--. 1 atlas atlas      6587 May 25 15:27 init_data.xml
2025-05-26 04:18:10 (94644): Guest Log: -rw-r--r--. 1 atlas atlas     15093 May 25 15:27 start_atlas.sh
2025-05-26 04:18:10 (94644): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 25 15:27 EVNT.44871834._001090.pool.root.1 -> /data/./ATLAS.root_0
2025-05-26 04:18:10 (94644): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 25 15:27 pandaJob.out
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas    990811 May 25 15:29 agis_schedconf.cvmfs.json
2025-05-26 04:18:10 (94644): Guest Log: drwx------. 4 atlas atlas      4096 May 25 15:29 pilot3
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas 194299401 May 25 19:16 HITS.44871837._027332.pool.root.1
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas      1033 May 25 19:17 memory_monitor_summary.json
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas   1596740 May 25 19:17 agis_ddmendpoints.agis.ALL.json
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas    367938 May 25 19:17 log.44871837._027332.job.log.tgz.1
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas        95 May 25 19:17 pilot_heartbeat.json
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas      7695 May 25 19:17 heartbeat.json
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas      4794 May 25 19:18 pilotlog.txt
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas   1089733 May 25 19:18 log.44871837._027332.job.log.1
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas       357 May 25 19:18 output.list
2025-05-26 04:18:10 (94644): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 25 19:18 runtime_log
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas   1474560 May 25 19:18 result.tar.gz
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas       666 May 25 19:18 YHkMDmkbFd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmafNKDmmfuJwn.diag
2025-05-26 04:18:10 (94644): Guest Log: -rw-r--r--. 1 atlas atlas      8607 May 25 19:18 runtime_log.err
2025-05-26 04:18:10 (94644): Guest Log: Looking for outputfile HITS.44871837._027332.pool.root.1
2025-05-26 04:18:10 (94644): Guest Log: HITS file was successfully produced
2025-05-26 04:18:10 (94644): Guest Log: -rw-------. 1 atlas atlas 194299401 May 25 19:16 /home/atlas/RunAtlas/HITS.44871837._027332.pool.root.1
2025-05-26 04:18:10 (94644): Guest Log: Successfully finished the ATLAS job!
2025-05-26 04:18:10 (94644): Guest Log: Copying the results back to the shared directory!
2025-05-26 04:18:10 (94644): Guest Log:  *** Contents of shared directory: ***
2025-05-26 04:18:10 (94644): Guest Log: total 222448
2025-05-26 04:18:10 (94644): Guest Log: -rw-r--r--. 1 root root 225775525 May 25 15:26 ATLAS.root_0
2025-05-26 04:18:10 (94644): Guest Log: -rw-rw-r--. 1 root root      6587 May 25 15:26 init_data.xml
2025-05-26 04:18:10 (94644): Guest Log: -rw-r--r--. 1 root root    508879 May 25 15:26 input.tar.gz
2025-05-26 04:18:10 (94644): Guest Log: -rw-r--r--. 1 root root   1474560 May 25 19:18 result.tar.gz
2025-05-26 04:18:10 (94644): Guest Log: -rw-r--r--. 1 root root     15093 May 25 15:26 start_atlas.sh
2025-05-26 04:18:10 (94644): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-26 04:18:10 (94644): VM Completion File Detected.
2025-05-26 04:18:10 (94644): Powering off VM.
2025-05-26 04:18:10 (94644): Successfully stopped VM.
2025-05-26 04:18:10 (94644): Deregistering VM. (boinc_2a52256fc6c4cf0a, slot#5)
2025-05-26 04:18:11 (94644): Removing network bandwidth throttle group from VM.
2025-05-26 04:18:11 (94644): Removing VM from VirtualBox.
04:18:16 (94644): called boinc_finish(0)

</stderr_txt>
]]>

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