Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:07:38 (31603): wrapper (7.7.26015): starting
20:07:38 (31603): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 20:07:38] Arguments: --nthreads 8
[2025-05-25 20:07:38] Threads: 8
[2025-05-25 20:07:38] Checking for CVMFS
[2025-05-25 20:07:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 20:07:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 20:07:39] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 20:07:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 20:07:40] 2.11.2.0 11919 19259 94656 146410 1 16 24423422 25165824 2558 130560 0 10440884 99.768 12647777 2203 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-25 20:07:40] CVMFS is ok
[2025-05-25 20:07:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 20:07:40] Checking for apptainer binary...
[2025-05-25 20:07:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 20:07:40] Running /usr/bin/apptainer --version
[2025-05-25 20:07:40] apptainer version 1.3.2-1.el7
[2025-05-25 20:07:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 20:07:46] cg-vwn425.simple-grid.lan
[2025-05-25 20:07:46] apptainer works
[2025-05-25 20:07:46] Set ATHENA_PROC_NUMBER=8
[2025-05-25 20:07:46] Set ATHENA_CORE_NUMBER=8
[2025-05-25 20:07:46] Starting ATLAS job with PandaID=6665716405
[2025-05-25 20:07:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 01:25:52]  *** The last 200 lines of the pilot log: ***
[2025-05-26 01:25:52] 2025-05-25 23:16:35,659 | INFO     | extracted standard info from prmon json
[2025-05-26 01:25:52] 2025-05-25 23:16:35,660 | INFO     | extracted standard memory fields from prmon json
[2025-05-26 01:25:52] 2025-05-25 23:16:35,660 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 01:25:52] 2025-05-25 23:16:35,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 01:25:52] 2025-05-25 23:16:35,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 01:25:52] 2025-05-25 23:16:35,666 | INFO     | fitting pss+swap vs Time
[2025-05-26 01:25:52] 2025-05-25 23:16:35,667 | INFO     | sum of square deviations: 7720081493.0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,670 | INFO     | sum of deviations: 41805124540.49999
[2025-05-26 01:25:52] 2025-05-25 23:16:35,670 | INFO     | mean x: 1748205981.5
[2025-05-26 01:25:52] 2025-05-25 23:16:35,670 | INFO     | mean y: 2477040.9828767125
[2025-05-26 01:25:52] 2025-05-25 23:16:35,670 | INFO     | -- intersect: -9464258361.39878
[2025-05-26 01:25:52] 2025-05-25 23:16:35,670 | INFO     | intersect: -9464258361.39878
[2025-05-26 01:25:52] 2025-05-25 23:16:35,671 | INFO     | chi2: 5.515533212498554
[2025-05-26 01:25:52] 2025-05-25 23:16:35,672 | INFO     | sum of square deviations: 7330250928.0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,682 | INFO     | sum of deviations: 60289578261.99999
[2025-05-26 01:25:52] 2025-05-25 23:16:35,682 | INFO     | mean x: 1748205829.0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,682 | INFO     | mean y: 2484166.4529616726
[2025-05-26 01:25:52] 2025-05-25 23:16:35,682 | INFO     | -- intersect: -14376094845.48507
[2025-05-26 01:25:52] 2025-05-25 23:16:35,682 | INFO     | intersect: -14376094845.48507
[2025-05-26 01:25:52] 2025-05-25 23:16:35,683 | INFO     | chi2: 4.775614918586069
[2025-05-26 01:25:52] 2025-05-25 23:16:35,683 | INFO     | current chi2=4.775614918586069 (change=13.415172484788654 %)
[2025-05-26 01:25:52] 2025-05-25 23:16:35,683 | INFO     | right removable region: 286
[2025-05-26 01:25:52] 2025-05-25 23:16:35,684 | INFO     | sum of square deviations: 7330250928.0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,686 | INFO     | sum of deviations: -52888652185.000015
[2025-05-26 01:25:52] 2025-05-25 23:16:35,687 | INFO     | mean x: 1748206134.0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,687 | INFO     | mean y: 2514029.7351916377
[2025-05-26 01:25:52] 2025-05-25 23:16:35,687 | INFO     | -- intersect: 12616033959.268703
[2025-05-26 01:25:52] 2025-05-25 23:16:35,687 | INFO     | intersect: 12616033959.268703
[2025-05-26 01:25:52] 2025-05-25 23:16:35,688 | INFO     | chi2: 1.468322053794567
[2025-05-26 01:25:52] 2025-05-25 23:16:35,688 | INFO     | current chi2=1.468322053794567 (change=73.37842059463527 %)
[2025-05-26 01:25:52] 2025-05-25 23:16:35,688 | INFO     | sum of square deviations: 6953769450.5
[2025-05-26 01:25:52] 2025-05-25 23:16:35,691 | INFO     | sum of deviations: -75557536540.0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,691 | INFO     | mean x: 1748206286.5
[2025-05-26 01:25:52] 2025-05-25 23:16:35,691 | INFO     | mean y: 2523142.418439716
[2025-05-26 01:25:52] 2025-05-25 23:16:35,691 | INFO     | -- intersect: 18997999094.268368
[2025-05-26 01:25:52] 2025-05-25 23:16:35,692 | INFO     | intersect: 18997999094.268368
[2025-05-26 01:25:52] 2025-05-25 23:16:35,692 | INFO     | chi2: 1.0564129255238717
[2025-05-26 01:25:52] 2025-05-25 23:16:35,692 | INFO     | current chi2=1.0564129255238717 (change=28.05305056926738 %)
[2025-05-26 01:25:52] 2025-05-25 23:16:35,703 | INFO     | sum of square deviations: 6590404498.0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,706 | INFO     | sum of deviations: -79922096727.00002
[2025-05-26 01:25:52] 2025-05-25 23:16:35,706 | INFO     | mean x: 1748206439.0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,706 | INFO     | mean y: 2524973.9927797834
[2025-05-26 01:25:52] 2025-05-25 23:16:35,706 | INFO     | -- intersect: 21203093794.756874
[2025-05-26 01:25:52] 2025-05-25 23:16:35,706 | INFO     | intersect: 21203093794.756874
[2025-05-26 01:25:52] 2025-05-25 23:16:35,707 | INFO     | chi2: 1.0306376741253558
[2025-05-26 01:25:52] 2025-05-25 23:16:35,707 | INFO     | current chi2=1.0306376741253558 (change=2.4398841377043947 %)
[2025-05-26 01:25:52] 2025-05-25 23:16:35,707 | INFO     | left removable region: 30
[2025-05-26 01:25:52] 2025-05-25 23:16:35,708 | INFO     | sum of square deviations: 5202255680.0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,710 | INFO     | sum of deviations: -35966840953.5
[2025-05-26 01:25:52] 2025-05-25 23:16:35,710 | INFO     | mean x: 1748206713.5
[2025-05-26 01:25:52] 2025-05-25 23:16:35,710 | INFO     | mean y: 2521966.30078125
[2025-05-26 01:25:52] 2025-05-25 23:16:35,710 | INFO     | -- intersect: 12089100690.223755
[2025-05-26 01:25:52] 2025-05-25 23:16:35,710 | INFO     | intersect: 12089100690.223755
[2025-05-26 01:25:52] 2025-05-25 23:16:35,711 | INFO     | chi2: 0.19921878094193538
[2025-05-26 01:25:52] 2025-05-25 23:16:35,711 | INFO     | -- intersect: 12089100690.223755
[2025-05-26 01:25:52] 2025-05-25 23:16:35,711 | INFO     | current memory leak: -6.91 B/s (using 256 data points, chi2=0.20)
[2025-05-26 01:25:52] 2025-05-25 23:16:35,712 | INFO     | ..............................
[2025-05-26 01:25:52] 2025-05-25 23:16:35,712 | INFO     | . Timing measurements:
[2025-05-26 01:25:52] 2025-05-25 23:16:35,712 | INFO     | . get job = 0 s
[2025-05-26 01:25:52] 2025-05-25 23:16:35,712 | INFO     | . initial setup = 4 s
[2025-05-26 01:25:52] 2025-05-25 23:16:35,713 | INFO     | . payload setup = 143 s
[2025-05-26 01:25:52] 2025-05-25 23:16:35,713 | INFO     | . stage-in = 0 s
[2025-05-26 01:25:52] 2025-05-25 23:16:35,713 | INFO     | . payload execution = 17945 s
[2025-05-26 01:25:52] 2025-05-25 23:16:35,713 | INFO     | . stage-out = 4 s
[2025-05-26 01:25:52] 2025-05-25 23:16:35,713 | INFO     | . log creation = 1 s
[2025-05-26 01:25:52] 2025-05-25 23:16:35,713 | INFO     | ..............................
[2025-05-26 01:25:52] 2025-05-25 23:16:35,845 | INFO     | 
[2025-05-26 01:25:52] 2025-05-25 23:16:35,845 | INFO     | job summary report
[2025-05-26 01:25:52] 2025-05-25 23:16:35,845 | INFO     | --------------------------------------------------
[2025-05-26 01:25:52] 2025-05-25 23:16:35,845 | INFO     | PanDA job id: 6665716405
[2025-05-26 01:25:52] 2025-05-25 23:16:35,845 | INFO     | task id: 44871837
[2025-05-26 01:25:52] 2025-05-25 23:16:35,845 | INFO     | errors: (none)
[2025-05-26 01:25:52] 2025-05-25 23:16:35,845 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 01:25:52] 2025-05-25 23:16:35,845 | INFO     | pilot state: finished 
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | transexitcode: 0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | exeerrorcode: 0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | exeerrordiag: 
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | exitcode: 0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | exitmsg: OK
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | cpuconsumptiontime: 67696 s
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | nevents: 400
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | neventsw: 0
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | pid: 9517
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | pgrp: 9517
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | corecount: 8
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | event service: False
[2025-05-26 01:25:52] 2025-05-25 23:16:35,846 | INFO     | sizes: {0: 2392913, 1: 2393599, 2: 2393798, 13: 2393798, 23: 2393854, 34: 2393882, 45: 2394038, 56: 2394066, 66: 2394094, 77: 2394122, 88: 2394692, 18092: 2426124,
[2025-05-26 01:25:52] 2025-05-25 23:16:35,847 | INFO     | --------------------------------------------------
[2025-05-26 01:25:52] 2025-05-25 23:16:35,847 | INFO     | 
[2025-05-26 01:25:52] 2025-05-25 23:16:35,847 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-05-26 01:25:52] 2025-05-25 23:16:36,350 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,350 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,351 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,351 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,351 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,352 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 01:25:52] 2025-05-25 23:16:36,352 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,352 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 01:25:52] 2025-05-25 23:16:36,352 | INFO     | job 6665716405 has completed (purged errors)
[2025-05-26 01:25:52] 2025-05-25 23:16:36,352 | INFO     | overall cleanup function is called
[2025-05-26 01:25:52] 2025-05-25 23:16:37,361 | INFO     | --- collectZombieJob: --- 10, [9517]
[2025-05-26 01:25:52] 2025-05-25 23:16:37,361 | INFO     | zombie collector waiting for pid 9517
[2025-05-26 01:25:52] 2025-05-25 23:16:37,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 01:25:52] 2025-05-25 23:16:37,361 | INFO     | collected zombie processes
[2025-05-26 01:25:52] 2025-05-25 23:16:37,361 | INFO     | will attempt to kill all subprocesses of pid=9517
[2025-05-26 01:25:52] 2025-05-25 23:16:37,453 | INFO     | process IDs to be killed: [9517] (in reverse order)
[2025-05-26 01:25:52] 2025-05-25 23:16:38,386 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 01:25:52] 2025-05-25 23:16:38,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 01:25:52] 2025-05-25 23:16:38,389 | INFO     | did not find any defunct processes belonging to 9517
[2025-05-26 01:25:52] 2025-05-25 23:16:38,391 | INFO     | did not find any defunct processes belonging to 9517
[2025-05-26 01:25:52] 2025-05-25 23:16:38,391 | INFO     | ready for new job
[2025-05-26 01:25:52] 2025-05-25 23:16:38,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 01:25:52] 2025-05-25 23:16:38,393 | INFO     | **************************************
[2025-05-26 01:25:52] 2025-05-25 23:16:38,393 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 01:25:52] 2025-05-25 23:16:38,393 | INFO     | **************************************
[2025-05-26 01:25:52] 2025-05-25 23:16:38,393 | INFO     | 
[2025-05-26 01:25:52] 2025-05-25 23:16:38,394 | INFO     | pilot is running in a VM
[2025-05-26 01:25:52] 2025-05-25 23:16:38,394 | INFO     | architecture information:
[2025-05-26 01:25:52] 2025-05-25 23:16:38,396 | INFO     | executing command: cat /etc/os-release
[2025-05-26 01:25:52] 2025-05-25 23:16:38,719 | INFO     | cat /etc/os-release:
[2025-05-26 01:25:52] NAME="CentOS Linux"
[2025-05-26 01:25:52] VERSION="7 (Core)"
[2025-05-26 01:25:52] ID="centos"
[2025-05-26 01:25:52] ID_LIKE="rhel fedora"
[2025-05-26 01:25:52] VERSION_ID="7"
[2025-05-26 01:25:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 01:25:52] ANSI_COLOR="0;31"
[2025-05-26 01:25:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 01:25:52] HOME_URL="https://www.centos.org/"
[2025-05-26 01:25:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 01:25:52] 
[2025-05-26 01:25:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 01:25:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 01:25:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 01:25:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 01:25:52] 
[2025-05-26 01:25:52] 2025-05-25 23:16:38,719 | INFO     | **************************************
[2025-05-26 01:25:52] 2025-05-25 23:16:39,223 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-05-26 01:25:52] 2025-05-25 23:16:39,425 | INFO     | sufficient remaining disk space (493821624320 B)
[2025-05-26 01:25:52] 2025-05-25 23:16:39,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 01:25:52] 2025-05-25 23:16:39,426 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 01:25:52] 2025-05-25 23:16:39,426 | INFO     | update_server=False
[2025-05-26 01:25:52] 2025-05-25 23:16:39,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 01:25:52] 2025-05-25 23:16:39,427 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 01:25:52] 2025-05-25 23:16:39,427 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 01:25:52] 2025-05-25 23:16:39,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 01:25:52] 2025-05-25 23:16:39,428 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 01:25:52] 2025-05-25 23:16:39,540 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 01:25:52] 2025-05-25 23:16:39,540 | INFO     | aborting loop
[2025-05-26 01:25:52] 2025-05-25 23:16:39,541 | INFO     | all job control threads have been joined
[2025-05-26 01:25:52] 2025-05-25 23:16:40,431 | INFO     | [job] retrieve thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:40,493 | INFO     | all data control threads have been joined
[2025-05-26 01:25:52] 2025-05-25 23:16:40,499 | INFO     | all payload control threads have been joined
[2025-05-26 01:25:52] 2025-05-25 23:16:40,546 | INFO     | [job] job monitor thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:40,547 | INFO     | [job] control thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:40,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 01:25:52] 2025-05-25 23:16:40,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 01:25:52] 2025-05-25 23:16:40,919 | INFO     | [payload] validate_post thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:40,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 01:25:52] 2025-05-25 23:16:40,979 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:40,986 | INFO     | [job] validate thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:41,073 | INFO     | [payload] failed_post thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:41,091 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:41,352 | INFO     | [data] copytool_in thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:41,498 | INFO     | [data] control thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:41,505 | INFO     | [payload] control thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:41,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:41,865 | INFO     | [job] queue monitor thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:41,918 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:42,819 | INFO     | [data] copytool_out thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:44,936 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 01:25:52] 2025-05-25 23:16:45,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712197527360)>', '<ExcThread(monitor, started 140711752087296)>']
[2025-05-26 01:25:52] 2025-05-25 23:16:45,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 01:25:52] 2025-05-25 23:16:45,463 | INFO     | [monitor] control thread has ended
[2025-05-26 01:25:52] 2025-05-25 23:16:50,479 | INFO     | all workflow threads have been joined
[2025-05-26 01:25:52] 2025-05-25 23:16:50,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 01:25:52] 2025-05-25 23:16:50,479 | INFO     | traces error code: 0
[2025-05-26 01:25:52] 2025-05-25 23:16:50,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 01:25:52] 2025-05-25 23:16:50,632 [wrapper] ==== pilot stdout END ====
[2025-05-26 01:25:52] 2025-05-25 23:16:50,643 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 01:25:52] 2025-05-25 23:16:50,654 [wrapper] pilotpid: 2904
[2025-05-26 01:25:52] 2025-05-25 23:16:50,664 [wrapper] Pilot exit status: 0
[2025-05-26 01:25:52] 2025-05-25 23:16:50,848 [wrapper] pandaids: 6665716405
[2025-05-26 01:25:52] 2025-05-25 23:16:50,996 [wrapper] cleanup supervisor_pilot 22457 2905
[2025-05-26 01:25:52] 2025-05-25 23:16:51,076 [wrapper] Test setup, not cleaning
[2025-05-26 01:25:52] 2025-05-25 23:16:51,192 [wrapper] apfmon messages muted
[2025-05-26 01:25:52] 2025-05-25 23:16:51,238 [wrapper] ==== wrapper stdout END ====
[2025-05-26 01:25:52] 2025-05-25 23:16:51,354 [wrapper] ==== wrapper stderr END ====
[2025-05-26 01:25:52]  *** Error codes and diagnostics ***
[2025-05-26 01:25:52]     "exeErrorCode": 0,
[2025-05-26 01:25:52]     "exeErrorDiag": "",
[2025-05-26 01:25:52]     "pilotErrorCode": 0,
[2025-05-26 01:25:52]     "pilotErrorDiag": "",
[2025-05-26 01:25:52]  *** Listing of results directory ***
[2025-05-26 01:25:52] total 413664
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc    495897 May 25 06:24 pilot3.tar.gz
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc      5111 May 25 06:34 queuedata.json
[2025-05-26 01:25:52] -rwx------. 1 boinc boinc     37140 May 25 06:34 runpilot2-wrapper.sh
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc       100 May 25 20:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 01:25:52] -rwxr-xr-x. 1 boinc boinc      7986 May 25 20:07 run_atlas
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc       105 May 25 20:07 job.xml
[2025-05-26 01:25:52] -rw-r--r--. 2 boinc boinc 223818855 May 25 20:07 EVNT.44871834._001161.pool.root.1
[2025-05-26 01:25:52] -rw-r--r--. 2 boinc boinc     15093 May 25 20:07 start_atlas.sh
[2025-05-26 01:25:52] drwxrwx--x. 2 boinc boinc        68 May 25 20:07 shared
[2025-05-26 01:25:52] -rw-r--r--. 2 boinc boinc    508881 May 25 20:07 input.tar.gz
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc      6373 May 25 20:07 init_data.xml
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc         0 May 25 20:07 boinc_lockfile
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc      2559 May 25 20:07 pandaJob.out
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc    990811 May 25 20:10 agis_schedconf.cvmfs.json
[2025-05-26 01:25:52] drwx------. 4 boinc boinc      4096 May 25 20:10 pilot3
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc 191999494 May 26 01:13 HITS.44871837._029130.pool.root.1
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc       531 May 26 01:13 boinc_task_state.xml
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc      1018 May 26 01:15 memory_monitor_summary.json
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc   1596740 May 26 01:15 agis_ddmendpoints.agis.ALL.json
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc    421128 May 26 01:15 log.44871837._029130.job.log.tgz.1
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc        95 May 26 01:15 pilot_heartbeat.json
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc      7692 May 26 01:16 heartbeat.json
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc      4540 May 26 01:16 pilotlog.txt
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc   1555791 May 26 01:16 log.44871837._029130.job.log.1
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc       357 May 26 01:16 output.list
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc       620 May 26 01:16 runtime_log
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc   1996800 May 26 01:16 result.tar.gz
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc      8673 May 26 01:16 runtime_log.err
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc       657 May 26 01:16 gQqNDmOFId7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkqNKDmTy9mSo.diag
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc      8192 May 26 01:25 boinc_mmap_file
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc        28 May 26 01:25 wrapper_checkpoint.txt
[2025-05-26 01:25:52] -rw-r--r--. 1 boinc boinc     20505 May 26 01:25 stderr.txt
[2025-05-26 01:25:52] HITS file was successfully produced:
[2025-05-26 01:25:52] -rw-------. 1 boinc boinc 191999494 May 26 01:13 shared/HITS.pool.root.1
[2025-05-26 01:25:52]  *** Contents of shared directory: ***
[2025-05-26 01:25:53] total 408544
[2025-05-26 01:25:53] -rw-r--r--. 2 boinc boinc 223818855 May 25 20:07 ATLAS.root_0
[2025-05-26 01:25:53] -rw-r--r--. 2 boinc boinc     15093 May 25 20:07 start_atlas.sh
[2025-05-26 01:25:53] -rw-r--r--. 2 boinc boinc    508881 May 25 20:07 input.tar.gz
[2025-05-26 01:25:53] -rw-------. 1 boinc boinc 191999494 May 26 01:13 HITS.pool.root.1
[2025-05-26 01:25:53] -rw-------. 1 boinc boinc   1996800 May 26 01:16 result.tar.gz
01:25:54 (31603): run_atlas exited; CPU time 67950.713782
01:25:54 (31603): called boinc_finish(0)

</stderr_txt>
]]>

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