Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:41:22 (2914694): wrapper (7.7.26015): starting
06:41:22 (2914694): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 06:41:22] Arguments: --nthreads 8
[2025-05-25 06:41:22] Threads: 8
[2025-05-25 06:41:22] Checking for CVMFS
[2025-05-25 06:41:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 06:41:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 06:41:23] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 06:41:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 06:41:23] 2.12.6.0 4868 22806 377472 146399 3 843 22052559 32935937 30790 16776704 0 192035364 99.666 169385628 22059 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 06:41:23] CVMFS is ok
[2025-05-25 06:41:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 06:41:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 06:41:23] Further information can be found at the LHC@home message board.
[2025-05-25 06:41:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 06:41:23] Checking for apptainer binary...
[2025-05-25 06:41:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 06:41:23] Running /usr/bin/apptainer --version
[2025-05-25 06:41:23] apptainer version 1.4.1-1.el9
[2025-05-25 06:41:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 06:41:24] c7-3-34.aglt2.org
[2025-05-25 06:41:24] apptainer works
[2025-05-25 06:41:24] Set ATHENA_PROC_NUMBER=8
[2025-05-25 06:41:24] Set ATHENA_CORE_NUMBER=8
[2025-05-25 06:41:24] Starting ATLAS job with PandaID=6665716240
[2025-05-25 06:41:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:40:10 (2914694): BOINC client no longer exists - exiting
08:40:10 (2914694): timer handler: client dead, exiting
08:48:07 (111675): wrapper (7.7.26015): starting
08:48:07 (111675): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 08:48:07] Arguments: --nthreads 8
[2025-05-25 08:48:07] Threads: 8
[2025-05-25 08:48:07] This job has been restarted, cleaning up previous attempt
[2025-05-25 08:48:07] Checking for CVMFS
[2025-05-25 08:48:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 08:48:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 08:48:07] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 08:48:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 08:48:08] 2.12.6.0 4868 22933 374800 146402 0 722 25163456 32935937 29140 16776704 0 193431482 99.667 170440766 22031 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 08:48:08] CVMFS is ok
[2025-05-25 08:48:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 08:48:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 08:48:08] Further information can be found at the LHC@home message board.
[2025-05-25 08:48:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 08:48:08] Checking for apptainer binary...
[2025-05-25 08:48:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 08:48:08] Running /usr/bin/apptainer --version
[2025-05-25 08:48:08] apptainer version 1.4.1-1.el9
[2025-05-25 08:48:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 08:48:08] c7-3-34.aglt2.org
[2025-05-25 08:48:08] apptainer works
[2025-05-25 08:48:08] Set ATHENA_PROC_NUMBER=8
[2025-05-25 08:48:08] Set ATHENA_CORE_NUMBER=8
[2025-05-25 08:48:08] Starting ATLAS job with PandaID=6665716240
[2025-05-25 08:48:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 19:04:02]  *** The last 200 lines of the pilot log: ***
[2025-05-25 19:04:02] 2025-05-25 23:03:43,817 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6665716240/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 19:04:02] 2025-05-25 23:03:43,818 | INFO     | extracted standard info from prmon json
[2025-05-25 19:04:02] 2025-05-25 23:03:43,818 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 19:04:02] 2025-05-25 23:03:43,818 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 19:04:02] 2025-05-25 23:03:43,826 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 19:04:02] 2025-05-25 23:03:43,826 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 19:04:02] 2025-05-25 23:03:43,854 | INFO     | fitting pss+swap vs Time
[2025-05-25 19:04:02] 2025-05-25 23:03:43,875 | INFO     | sum of square deviations: 68326761604.29626
[2025-05-25 19:04:02] 2025-05-25 23:03:43,901 | INFO     | sum of deviations: 59494962763.32782
[2025-05-25 19:04:02] 2025-05-25 23:03:43,901 | INFO     | mean x: 1748195768.789735
[2025-05-25 19:04:02] 2025-05-25 23:03:43,902 | INFO     | mean y: 2069986.9238410597
[2025-05-25 19:04:02] 2025-05-25 23:03:43,902 | INFO     | -- intersect: -1520157025.2314177
[2025-05-25 19:04:02] 2025-05-25 23:03:43,902 | INFO     | intersect: -1520157025.2314177
[2025-05-25 19:04:02] 2025-05-25 23:03:43,923 | INFO     | chi2: 3.685503449344285
[2025-05-25 19:04:02] 2025-05-25 23:03:43,923 | INFO     | sum of square deviations: 66643974123.873024
[2025-05-25 19:04:02] 2025-05-25 23:03:43,953 | INFO     | sum of deviations: 126390995985.0485
[2025-05-25 19:04:02] 2025-05-25 23:03:43,953 | INFO     | mean x: 1748195616.2921536
[2025-05-25 19:04:02] 2025-05-25 23:03:43,953 | INFO     | mean y: 2076030.6911519198
[2025-05-25 19:04:02] 2025-05-25 23:03:43,970 | INFO     | -- intersect: -3313395293.23025
[2025-05-25 19:04:02] 2025-05-25 23:03:43,971 | INFO     | intersect: -3313395293.23025
[2025-05-25 19:04:02] 2025-05-25 23:03:43,971 | INFO     | chi2: 2.6588647997364356
[2025-05-25 19:04:02] 2025-05-25 23:03:43,971 | INFO     | current chi2=2.6588647997364356 (change=27.856130477655803 %)
[2025-05-25 19:04:02] 2025-05-25 23:03:43,972 | INFO     | sum of square deviations: 64989010847.5304
[2025-05-25 19:04:02] 2025-05-25 23:03:44,009 | INFO     | sum of deviations: 134860344008.19196
[2025-05-25 19:04:02] 2025-05-25 23:03:44,009 | INFO     | mean x: 1748195463.7929294
[2025-05-25 19:04:02] 2025-05-25 23:03:44,009 | INFO     | mean y: 2076810.1885521885
[2025-05-25 19:04:02] 2025-05-25 23:03:44,009 | INFO     | -- intersect: -3625647916.900969
[2025-05-25 19:04:02] 2025-05-25 23:03:44,009 | INFO     | intersect: -3625647916.900969
[2025-05-25 19:04:02] 2025-05-25 23:03:44,010 | INFO     | chi2: 2.6381092392145207
[2025-05-25 19:04:02] 2025-05-25 23:03:44,010 | INFO     | current chi2=2.6381092392145207 (change=0.7806173718939147 %)
[2025-05-25 19:04:02] 2025-05-25 23:03:44,010 | INFO     | right removable region: 593
[2025-05-25 19:04:02] 2025-05-25 23:03:44,010 | INFO     | sum of square deviations: 66643867373.87304
[2025-05-25 19:04:02] 2025-05-25 23:03:44,064 | INFO     | sum of deviations: -35549372403.428986
[2025-05-25 19:04:02] 2025-05-25 23:03:44,064 | INFO     | mean x: 1748195921.2921536
[2025-05-25 19:04:02] 2025-05-25 23:03:44,065 | INFO     | mean y: 2078577.185308848
[2025-05-25 19:04:02] 2025-05-25 23:03:44,065 | INFO     | -- intersect: 934606509.4483533
[2025-05-25 19:04:02] 2025-05-25 23:03:44,065 | INFO     | intersect: 934606509.4483533
[2025-05-25 19:04:02] 2025-05-25 23:03:44,065 | INFO     | chi2: 1.9914583293754675
[2025-05-25 19:04:02] 2025-05-25 23:03:44,065 | INFO     | current chi2=1.9914583293754675 (change=45.965093867168065 %)
[2025-05-25 19:04:02] 2025-05-25 23:03:44,066 | INFO     | sum of square deviations: 64988834130.94223
[2025-05-25 19:04:02] 2025-05-25 23:03:44,110 | INFO     | sum of deviations: -74146893484.78448
[2025-05-25 19:04:02] 2025-05-25 23:03:44,110 | INFO     | mean x: 1748196073.794613
[2025-05-25 19:04:02] 2025-05-25 23:03:44,110 | INFO     | mean y: 2082133.5673400674
[2025-05-25 19:04:02] 2025-05-25 23:03:44,110 | INFO     | -- intersect: 1996629501.704413
[2025-05-25 19:04:02] 2025-05-25 23:03:44,110 | INFO     | intersect: 1996629501.704413
[2025-05-25 19:04:02] 2025-05-25 23:03:44,111 | INFO     | chi2: 1.7718481659445995
[2025-05-25 19:04:02] 2025-05-25 23:03:44,111 | INFO     | current chi2=1.7718481659445995 (change=11.02760525748681 %)
[2025-05-25 19:04:02] 2025-05-25 23:03:44,111 | INFO     | left removable region: 20
[2025-05-25 19:04:02] 2025-05-25 23:03:44,111 | INFO     | sum of square deviations: 58336888709.56377
[2025-05-25 19:04:02] 2025-05-25 23:03:44,121 | INFO     | sum of deviations: -36711789200.35424
[2025-05-25 19:04:02] 2025-05-25 23:03:44,121 | INFO     | mean x: 1748196043.296684
[2025-05-25 19:04:02] 2025-05-25 23:03:44,121 | INFO     | mean y: 2093236.7609075045
[2025-05-25 19:04:02] 2025-05-25 23:03:44,121 | INFO     | -- intersect: 1102244548.256538
[2025-05-25 19:04:02] 2025-05-25 23:03:44,121 | INFO     | intersect: 1102244548.256538
[2025-05-25 19:04:02] 2025-05-25 23:03:44,122 | INFO     | chi2: 0.4810469991510086
[2025-05-25 19:04:02] 2025-05-25 23:03:44,122 | INFO     | -- intersect: 1102244548.256538
[2025-05-25 19:04:02] 2025-05-25 23:03:44,122 | INFO     | current memory leak: -0.63 B/s (using 573 data points, chi2=0.48)
[2025-05-25 19:04:02] 2025-05-25 23:03:44,123 | INFO     | ..............................
[2025-05-25 19:04:02] 2025-05-25 23:03:44,123 | INFO     | . Timing measurements:
[2025-05-25 19:04:02] 2025-05-25 23:03:44,123 | INFO     | . get job = 0 s
[2025-05-25 19:04:02] 2025-05-25 23:03:44,123 | INFO     | . initial setup = 1 s
[2025-05-25 19:04:02] 2025-05-25 23:03:44,123 | INFO     | . payload setup = 18 s
[2025-05-25 19:04:02] 2025-05-25 23:03:44,123 | INFO     | . stage-in = 0 s
[2025-05-25 19:04:02] 2025-05-25 23:03:44,123 | INFO     | . payload execution = 36834 s
[2025-05-25 19:04:02] 2025-05-25 23:03:44,123 | INFO     | . stage-out = 5 s
[2025-05-25 19:04:02] 2025-05-25 23:03:44,123 | INFO     | . log creation = 0 s
[2025-05-25 19:04:02] 2025-05-25 23:03:44,123 | INFO     | ..............................
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | 
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | job summary report
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | --------------------------------------------------
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | PanDA job id: 6665716240
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | task id: 44871837
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | errors: (none)
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | pilot state: finished 
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | transexitcode: 0
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | exeerrorcode: 0
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | exeerrordiag: 
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | exitcode: 0
[2025-05-25 19:04:02] 2025-05-25 23:03:44,371 | INFO     | exitmsg: OK
[2025-05-25 19:04:02] 2025-05-25 23:03:44,372 | INFO     | cpuconsumptiontime: 40090 s
[2025-05-25 19:04:02] 2025-05-25 23:03:44,372 | INFO     | nevents: 400
[2025-05-25 19:04:02] 2025-05-25 23:03:44,372 | INFO     | neventsw: 0
[2025-05-25 19:04:02] 2025-05-25 23:03:44,372 | INFO     | pid: 182619
[2025-05-25 19:04:02] 2025-05-25 23:03:44,372 | INFO     | pgrp: 182619
[2025-05-25 19:04:02] 2025-05-25 23:03:44,372 | INFO     | corecount: 8
[2025-05-25 19:04:02] 2025-05-25 23:03:44,372 | INFO     | event service: False
[2025-05-25 19:04:02] 2025-05-25 23:03:44,372 | INFO     | sizes: {0: 2392913, 1: 2393769, 12: 2393769, 13: 2394003, 23: 2394059, 36858: 2435272, 36864: 2444213, 36866: 2444269, 36880: 2444439}
[2025-05-25 19:04:02] 2025-05-25 23:03:44,372 | INFO     | --------------------------------------------------
[2025-05-25 19:04:02] 2025-05-25 23:03:44,372 | INFO     | 
[2025-05-25 19:04:02] 2025-05-25 23:03:44,372 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-25 19:04:02] 2025-05-25 23:03:44,399 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,399 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,399 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,400 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 19:04:02] 2025-05-25 23:03:44,401 | INFO     | job 6665716240 has completed (purged errors)
[2025-05-25 19:04:02] 2025-05-25 23:03:44,401 | INFO     | overall cleanup function is called
[2025-05-25 19:04:02] 2025-05-25 23:03:45,418 | INFO     | --- collectZombieJob: --- 10, [182619]
[2025-05-25 19:04:02] 2025-05-25 23:03:45,419 | INFO     | zombie collector waiting for pid 182619
[2025-05-25 19:04:02] 2025-05-25 23:03:45,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 19:04:02] 2025-05-25 23:03:45,419 | INFO     | collected zombie processes
[2025-05-25 19:04:02] 2025-05-25 23:03:45,419 | INFO     | will attempt to kill all subprocesses of pid=182619
[2025-05-25 19:04:02] 2025-05-25 23:03:46,834 | INFO     | process IDs to be killed: [182619] (in reverse order)
[2025-05-25 19:04:02] 2025-05-25 23:03:47,031 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 19:04:02] 2025-05-25 23:03:47,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 19:04:02] 2025-05-25 23:03:47,056 | INFO     | did not find any defunct processes belonging to 182619
[2025-05-25 19:04:02] 2025-05-25 23:03:47,112 | INFO     | did not find any defunct processes belonging to 182619
[2025-05-25 19:04:02] 2025-05-25 23:03:47,113 | INFO     | ready for new job
[2025-05-25 19:04:02] 2025-05-25 23:03:47,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 19:04:02] 2025-05-25 23:03:47,128 | INFO     | **************************************
[2025-05-25 19:04:02] 2025-05-25 23:03:47,128 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 19:04:02] 2025-05-25 23:03:47,128 | INFO     | **************************************
[2025-05-25 19:04:02] 2025-05-25 23:03:47,129 | INFO     | 
[2025-05-25 19:04:02] 2025-05-25 23:03:47,156 | INFO     | architecture information:
[2025-05-25 19:04:02] 2025-05-25 23:03:47,162 | INFO     | executing command: cat /etc/os-release
[2025-05-25 19:04:02] 2025-05-25 23:03:47,228 | INFO     | cat /etc/os-release:
[2025-05-25 19:04:02] NAME="CentOS Linux"
[2025-05-25 19:04:02] VERSION="7 (Core)"
[2025-05-25 19:04:02] ID="centos"
[2025-05-25 19:04:02] ID_LIKE="rhel fedora"
[2025-05-25 19:04:02] VERSION_ID="7"
[2025-05-25 19:04:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 19:04:02] ANSI_COLOR="0;31"
[2025-05-25 19:04:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 19:04:02] HOME_URL="https://www.centos.org/"
[2025-05-25 19:04:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 19:04:02] 
[2025-05-25 19:04:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 19:04:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 19:04:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 19:04:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 19:04:02] 
[2025-05-25 19:04:02] 2025-05-25 23:03:47,228 | INFO     | **************************************
[2025-05-25 19:04:02] 2025-05-25 23:03:47,732 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-25 19:04:02] 2025-05-25 23:03:47,787 | INFO     | sufficient remaining disk space (73620520960 B)
[2025-05-25 19:04:02] 2025-05-25 23:03:47,787 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 19:04:02] 2025-05-25 23:03:47,787 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 19:04:02] 2025-05-25 23:03:47,787 | INFO     | update_server=False
[2025-05-25 19:04:02] 2025-05-25 23:03:47,787 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 19:04:02] 2025-05-25 23:03:47,788 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 19:04:02] 2025-05-25 23:03:47,789 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 19:04:02] 2025-05-25 23:03:47,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 19:04:02] 2025-05-25 23:03:47,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 19:04:02] 2025-05-25 23:03:47,792 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 19:04:02] 2025-05-25 23:03:47,792 | INFO     | aborting loop
[2025-05-25 19:04:02] 2025-05-25 23:03:47,925 | INFO     | all payload control threads have been joined
[2025-05-25 19:04:02] 2025-05-25 23:03:48,511 | INFO     | all data control threads have been joined
[2025-05-25 19:04:02] 2025-05-25 23:03:48,604 | INFO     | all job control threads have been joined
[2025-05-25 19:04:02] 2025-05-25 23:03:48,793 | INFO     | [job] retrieve thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:48,797 | INFO     | [job] job monitor thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:48,931 | INFO     | [payload] control thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:49,052 | INFO     | [payload] validate_post thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:49,075 | INFO     | [payload] failed_post thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:49,145 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 19:04:02] 2025-05-25 23:03:49,225 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:49,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 19:04:02] 2025-05-25 23:03:49,517 | INFO     | [data] control thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:49,579 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:49,610 | INFO     | [job] control thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:50,015 | INFO     | [job] validate thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:50,019 | INFO     | [data] copytool_in thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:50,045 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:50,046 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:50,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 19:04:02] 2025-05-25 23:03:50,401 | INFO     | [job] queue monitor thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:51,152 | INFO     | [data] copytool_out thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:54,059 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 19:04:02] 2025-05-25 23:03:55,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629888091968)>', '<ExcThread(monitor, started 139629185464064)>']
[2025-05-25 19:04:02] 2025-05-25 23:03:55,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 19:04:02] 2025-05-25 23:03:55,837 | INFO     | [monitor] control thread has ended
[2025-05-25 19:04:02] 2025-05-25 23:04:00,469 | INFO     | all workflow threads have been joined
[2025-05-25 19:04:02] 2025-05-25 23:04:00,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 19:04:02] 2025-05-25 23:04:00,470 | INFO     | traces error code: 0
[2025-05-25 19:04:02] 2025-05-25 23:04:00,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 19:04:02] 2025-05-25 23:04:01,739 [wrapper] ==== pilot stdout END ====
[2025-05-25 19:04:02] 2025-05-25 23:04:01,743 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 19:04:02] 2025-05-25 23:04:01,748 [wrapper] pilotpid: 134294
[2025-05-25 19:04:02] 2025-05-25 23:04:01,752 [wrapper] Pilot exit status: 0
[2025-05-25 19:04:02] 2025-05-25 23:04:01,771 [wrapper] pandaids: 6665716240 6665716240
[2025-05-25 19:04:02] 2025-05-25 23:04:01,937 [wrapper] cleanup supervisor_pilot 4132221 134295
[2025-05-25 19:04:02] 2025-05-25 23:04:01,940 [wrapper] Test setup, not cleaning
[2025-05-25 19:04:02] 2025-05-25 23:04:01,942 [wrapper] apfmon messages muted
[2025-05-25 19:04:02] 2025-05-25 23:04:01,944 [wrapper] ==== wrapper stdout END ====
[2025-05-25 19:04:02] 2025-05-25 23:04:01,946 [wrapper] ==== wrapper stderr END ====
[2025-05-25 19:04:02]  *** Error codes and diagnostics ***
[2025-05-25 19:04:02]     "exeErrorCode": 0,
[2025-05-25 19:04:02]     "exeErrorDiag": "",
[2025-05-25 19:04:02]     "pilotErrorCode": 0,
[2025-05-25 19:04:02]     "pilotErrorDiag": "",
[2025-05-25 19:04:02]  *** Listing of results directory ***
[2025-05-25 19:04:02] total 636624
[2025-05-25 19:04:02] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas    495897 May 25 00:24 pilot3.tar.gz
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas      5111 May 25 00:26 queuedata.json
[2025-05-25 19:04:02] -rwx------. 1 boincer umatlas     37140 May 25 00:27 runpilot2-wrapper.sh
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas       100 May 25 06:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 19:04:02] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 06:41 run_atlas
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas       105 May 25 06:41 job.xml
[2025-05-25 19:04:02] -rw-r--r--. 3 boincer umatlas 221837977 May 25 06:41 EVNT.44871834._001154.pool.root.1
[2025-05-25 19:04:02] -rw-r--r--. 3 boincer umatlas 221837977 May 25 06:41 ATLAS.root_0
[2025-05-25 19:04:02] -rw-r--r--. 2 boincer umatlas    508881 May 25 06:41 input.tar.gz
[2025-05-25 19:04:02] drwxrwx--x. 2 boincer umatlas      4096 May 25 06:41 shared
[2025-05-25 19:04:02] -rw-r--r--. 2 boincer umatlas     15093 May 25 06:41 start_atlas.sh
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas         0 May 25 06:41 boinc_lockfile
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas      2559 May 25 08:48 pandaJob.out
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas    990811 May 25 08:48 agis_schedconf.cvmfs.json
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas      6933 May 25 19:01 init_data.xml
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas 197123753 May 25 19:02 HITS.44871837._028965.pool.root.1
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas       531 May 25 19:02 boinc_task_state.xml
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas      1047 May 25 19:03 memory_monitor_summary.json
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas   1596740 May 25 19:03 agis_ddmendpoints.agis.ALL.json
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas    606847 May 25 19:03 log.44871837._028965.job.log.tgz.1
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas      7712 May 25 19:03 heartbeat.json
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas        96 May 25 19:03 pilot_heartbeat.json
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas      4476 May 25 19:04 pilotlog.txt
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas        28 May 25 19:04 wrapper_checkpoint.txt
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas      8192 May 25 19:04 boinc_mmap_file
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas   3028738 May 25 19:04 log.44871837._028965.job.log.1
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas       357 May 25 19:04 output.list
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas       620 May 25 19:04 runtime_log
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas   3655680 May 25 19:04 result.tar.gz
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas      8740 May 25 19:04 runtime_log.err
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas       786 May 25 19:04 gIPKDmY8Hd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhPTKDm6eqB2m.diag
[2025-05-25 19:04:02] -rw-r--r--. 1 boincer umatlas     23227 May 25 19:04 stderr.txt
[2025-05-25 19:04:02] HITS file was successfully produced:
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas 197123753 May 25 19:02 shared/HITS.pool.root.1
[2025-05-25 19:04:02]  *** Contents of shared directory: ***
[2025-05-25 19:04:02] total 413236
[2025-05-25 19:04:02] -rw-r--r--. 3 boincer umatlas 221837977 May 25 06:41 ATLAS.root_0
[2025-05-25 19:04:02] -rw-r--r--. 2 boincer umatlas    508881 May 25 06:41 input.tar.gz
[2025-05-25 19:04:02] -rw-r--r--. 2 boincer umatlas     15093 May 25 06:41 start_atlas.sh
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas 197123753 May 25 19:02 HITS.pool.root.1
[2025-05-25 19:04:02] -rw-------. 1 boincer umatlas   3655680 May 25 19:04 result.tar.gz
19:04:03 (111675): run_atlas exited; CPU time 41854.190478
19:04:03 (111675): called boinc_finish(0)

</stderr_txt>
]]>

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