Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:37:56 (3445316): wrapper (7.7.26015): starting
07:37:56 (3445316): wrapper: running run_atlas (--nthreads 6)
[2025-05-26 07:37:56] Arguments: --nthreads 6
[2025-05-26 07:37:56] Threads: 6
[2025-05-26 07:37:56] Checking for CVMFS
[2025-05-26 07:37:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-26 07:37:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-26 07:37:56] Running cvmfs_config stat atlas.cern.ch
[2025-05-26 07:37:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-26 07:37:57] 2.12.7.0 2630941 2032 69588 146417 2 186 28466393 52428800 600 130560 0 2213255 99.992 541851 1049 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-05-26 07:37:57] CVMFS is ok
[2025-05-26 07:37:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-26 07:37:57] Small home clusters do not require a local http proxy but it is suggested if
[2025-05-26 07:37:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-05-26 07:37:57] Further information can be found at the LHC@home message board.
[2025-05-26 07:37:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 07:37:57] Checking for apptainer binary...
[2025-05-26 07:37:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-26 07:37:57] Running /usr/bin/apptainer --version
[2025-05-26 07:37:57] apptainer version 1.4.0-1.el9
[2025-05-26 07:37:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 07:37:57] Atto003
[2025-05-26 07:37:57] apptainer works
[2025-05-26 07:37:57] Set ATHENA_PROC_NUMBER=6
[2025-05-26 07:37:57] Set ATHENA_CORE_NUMBER=6
[2025-05-26 07:37:57] Starting ATLAS job with PandaID=6665679956
[2025-05-26 07:37:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 10:03:33]  *** The last 200 lines of the pilot log: ***
[2025-05-26 10:03:33] 2025-05-26 01:03:19,450 | INFO     | mean x: 1748217032.0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,450 | INFO     | mean y: 2390010.811188811
[2025-05-26 10:03:33] 2025-05-26 01:03:19,450 | INFO     | -- intersect: -88786990738.40529
[2025-05-26 10:03:33] 2025-05-26 01:03:19,450 | INFO     | intersect: -88786990738.40529
[2025-05-26 10:03:33] 2025-05-26 01:03:19,450 | INFO     | chi2: 4.113924384227524
[2025-05-26 10:03:33] 2025-05-26 01:03:19,450 | INFO     | sum of square deviations: 814878534.5
[2025-05-26 10:03:33] 2025-05-26 01:03:19,451 | INFO     | sum of deviations: 44380012833.999985
[2025-05-26 10:03:33] 2025-05-26 01:03:19,451 | INFO     | mean x: 1748216879.5
[2025-05-26 10:03:33] 2025-05-26 01:03:19,451 | INFO     | mean y: 2387237.768115942
[2025-05-26 10:03:33] 2025-05-26 01:03:19,451 | INFO     | -- intersect: -95209210888.85478
[2025-05-26 10:03:33] 2025-05-26 01:03:19,451 | INFO     | intersect: -95209210888.85478
[2025-05-26 10:03:33] 2025-05-26 01:03:19,451 | INFO     | chi2: 4.119648656286213
[2025-05-26 10:03:33] 2025-05-26 01:03:19,452 | INFO     | current chi2=4.119648656286213 (change=-0.13914383260506036 %)
[2025-05-26 10:03:33] 2025-05-26 01:03:19,452 | INFO     | right removable region: 137
[2025-05-26 10:03:33] 2025-05-26 01:03:19,452 | INFO     | sum of square deviations: 814878534.5
[2025-05-26 10:03:33] 2025-05-26 01:03:19,452 | INFO     | sum of deviations: 11808214812.000004
[2025-05-26 10:03:33] 2025-05-26 01:03:19,452 | INFO     | mean x: 1748217184.5
[2025-05-26 10:03:33] 2025-05-26 01:03:19,452 | INFO     | mean y: 2446679.884057971
[2025-05-26 10:03:33] 2025-05-26 01:03:19,453 | INFO     | -- intersect: -25330560852.6709
[2025-05-26 10:03:33] 2025-05-26 01:03:19,453 | INFO     | intersect: -25330560852.6709
[2025-05-26 10:03:33] 2025-05-26 01:03:19,453 | INFO     | chi2: 1.5078696811205605
[2025-05-26 10:03:33] 2025-05-26 01:03:19,453 | INFO     | current chi2=1.5078696811205605 (change=63.34717072337015 %)
[2025-05-26 10:03:33] 2025-05-26 01:03:19,453 | INFO     | sum of square deviations: 729472282.0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,454 | INFO     | sum of deviations: -14060677815.000004
[2025-05-26 10:03:33] 2025-05-26 01:03:19,454 | INFO     | mean x: 1748217337.0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,454 | INFO     | mean y: 2492881.060150376
[2025-05-26 10:03:33] 2025-05-26 01:03:19,454 | INFO     | -- intersect: 33699620698.939713
[2025-05-26 10:03:33] 2025-05-26 01:03:19,454 | INFO     | intersect: 33699620698.939713
[2025-05-26 10:03:33] 2025-05-26 01:03:19,454 | INFO     | chi2: 0.10649527903415722
[2025-05-26 10:03:33] 2025-05-26 01:03:19,454 | INFO     | current chi2=0.10649527903415722 (change=92.93736850289237 %)
[2025-05-26 10:03:33] 2025-05-26 01:03:19,454 | INFO     | sum of square deviations: 650252192.0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,455 | INFO     | sum of deviations: -15281942436.5
[2025-05-26 10:03:33] 2025-05-26 01:03:19,455 | INFO     | mean x: 1748217489.5
[2025-05-26 10:03:33] 2025-05-26 01:03:19,455 | INFO     | mean y: 2495080.3046875
[2025-05-26 10:03:33] 2025-05-26 01:03:19,455 | INFO     | -- intersect: 41088337419.18225
[2025-05-26 10:03:33] 2025-05-26 01:03:19,455 | INFO     | intersect: 41088337419.18225
[2025-05-26 10:03:33] 2025-05-26 01:03:19,455 | INFO     | chi2: 0.058554004090189495
[2025-05-26 10:03:33] 2025-05-26 01:03:19,455 | INFO     | current chi2=0.058554004090189495 (change=45.01727717769637 %)
[2025-05-26 10:03:33] 2025-05-26 01:03:19,455 | INFO     | sum of square deviations: 576985702.0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,456 | INFO     | sum of deviations: -12787013492.000002
[2025-05-26 10:03:33] 2025-05-26 01:03:19,456 | INFO     | mean x: 1748217642.0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,456 | INFO     | mean y: 2489874.8292682925
[2025-05-26 10:03:33] 2025-05-26 01:03:19,456 | INFO     | -- intersect: 38746054052.79642
[2025-05-26 10:03:33] 2025-05-26 01:03:19,456 | INFO     | intersect: 38746054052.79642
[2025-05-26 10:03:33] 2025-05-26 01:03:19,456 | INFO     | chi2: 0.057034461807050414
[2025-05-26 10:03:33] 2025-05-26 01:03:19,456 | INFO     | current chi2=0.057034461807050414 (change=2.5951125063942024 %)
[2025-05-26 10:03:33] 2025-05-26 01:03:19,456 | INFO     | left removable region: 40
[2025-05-26 10:03:33] 2025-05-26 01:03:19,457 | INFO     | sum of square deviations: 282974608.0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,457 | INFO     | sum of deviations: -1331784452.0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,457 | INFO     | mean x: 1748218069.0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,457 | INFO     | mean y: 2459609.3917525774
[2025-05-26 10:03:33] 2025-05-26 01:03:19,457 | INFO     | -- intersect: 8230228381.491838
[2025-05-26 10:03:33] 2025-05-26 01:03:19,457 | INFO     | intersect: 8230228381.491838
[2025-05-26 10:03:33] 2025-05-26 01:03:19,457 | INFO     | chi2: 0.011973724820142286
[2025-05-26 10:03:33] 2025-05-26 01:03:19,457 | INFO     | -- intersect: 8230228381.491838
[2025-05-26 10:03:33] 2025-05-26 01:03:19,457 | INFO     | current memory leak: -4.71 B/s (using 97 data points, chi2=0.01)
[2025-05-26 10:03:33] 2025-05-26 01:03:19,458 | INFO     | ..............................
[2025-05-26 10:03:33] 2025-05-26 01:03:19,458 | INFO     | . Timing measurements:
[2025-05-26 10:03:33] 2025-05-26 01:03:19,458 | INFO     | . get job = 0 s
[2025-05-26 10:03:33] 2025-05-26 01:03:19,458 | INFO     | . initial setup = 3 s
[2025-05-26 10:03:33] 2025-05-26 01:03:19,458 | INFO     | . payload setup = 2 s
[2025-05-26 10:03:33] 2025-05-26 01:03:19,458 | INFO     | . stage-in = 0 s
[2025-05-26 10:03:33] 2025-05-26 01:03:19,458 | INFO     | . payload execution = 8691 s
[2025-05-26 10:03:33] 2025-05-26 01:03:19,458 | INFO     | . stage-out = 0 s
[2025-05-26 10:03:33] 2025-05-26 01:03:19,458 | INFO     | . log creation = 0 s
[2025-05-26 10:03:33] 2025-05-26 01:03:19,458 | INFO     | ..............................
[2025-05-26 10:03:33] 2025-05-26 01:03:19,510 | INFO     | 
[2025-05-26 10:03:33] 2025-05-26 01:03:19,511 | INFO     | job summary report
[2025-05-26 10:03:33] 2025-05-26 01:03:19,511 | INFO     | --------------------------------------------------
[2025-05-26 10:03:33] 2025-05-26 01:03:19,511 | INFO     | PanDA job id: 6665679956
[2025-05-26 10:03:33] 2025-05-26 01:03:19,511 | INFO     | task id: 44871837
[2025-05-26 10:03:33] 2025-05-26 01:03:19,511 | INFO     | errors: (none)
[2025-05-26 10:03:33] 2025-05-26 01:03:19,511 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 10:03:33] 2025-05-26 01:03:19,511 | INFO     | pilot state: finished 
[2025-05-26 10:03:33] 2025-05-26 01:03:19,511 | INFO     | transexitcode: 0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,511 | INFO     | exeerrorcode: 0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,511 | INFO     | exeerrordiag: 
[2025-05-26 10:03:33] 2025-05-26 01:03:19,511 | INFO     | exitcode: 0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,511 | INFO     | exitmsg: OK
[2025-05-26 10:03:33] 2025-05-26 01:03:19,512 | INFO     | cpuconsumptiontime: 47550 s
[2025-05-26 10:03:33] 2025-05-26 01:03:19,512 | INFO     | nevents: 400
[2025-05-26 10:03:33] 2025-05-26 01:03:19,512 | INFO     | neventsw: 0
[2025-05-26 10:03:33] 2025-05-26 01:03:19,512 | INFO     | pid: 3455546
[2025-05-26 10:03:33] 2025-05-26 01:03:19,512 | INFO     | pgrp: 3455546
[2025-05-26 10:03:33] 2025-05-26 01:03:19,512 | INFO     | corecount: 6
[2025-05-26 10:03:33] 2025-05-26 01:03:19,512 | INFO     | event service: False
[2025-05-26 10:03:33] 2025-05-26 01:03:19,512 | INFO     | sizes: {0: 2393739, 2: 2393945, 10: 2393973, 8697: 2422041, 8699: 2430982, 8701: 2431038, 8703: 2431336}
[2025-05-26 10:03:33] 2025-05-26 01:03:19,512 | INFO     | --------------------------------------------------
[2025-05-26 10:03:33] 2025-05-26 01:03:19,512 | INFO     | 
[2025-05-26 10:03:33] 2025-05-26 01:03:19,512 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-05-26 10:03:33] 2025-05-26 01:03:19,520 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,520 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,520 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,520 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,520 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,520 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | job 6665679956 has completed (purged errors)
[2025-05-26 10:03:33] 2025-05-26 01:03:19,521 | INFO     | overall cleanup function is called
[2025-05-26 10:03:33] 2025-05-26 01:03:19,935 | INFO     | 8719s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-26 10:03:33] 2025-05-26 01:03:20,527 | INFO     | --- collectZombieJob: --- 10, [3455546]
[2025-05-26 10:03:33] 2025-05-26 01:03:20,527 | INFO     | zombie collector waiting for pid 3455546
[2025-05-26 10:03:33] 2025-05-26 01:03:20,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 10:03:33] 2025-05-26 01:03:20,527 | INFO     | collected zombie processes
[2025-05-26 10:03:33] 2025-05-26 01:03:20,527 | INFO     | will attempt to kill all subprocesses of pid=3455546
[2025-05-26 10:03:33] 2025-05-26 01:03:20,595 | INFO     | process IDs to be killed: [3455546] (in reverse order)
[2025-05-26 10:03:33] 2025-05-26 01:03:20,616 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 10:03:33] 2025-05-26 01:03:20,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 10:03:33] 2025-05-26 01:03:20,617 | INFO     | did not find any defunct processes belonging to 3455546
[2025-05-26 10:03:33] 2025-05-26 01:03:20,618 | INFO     | did not find any defunct processes belonging to 3455546
[2025-05-26 10:03:33] 2025-05-26 01:03:20,619 | INFO     | ready for new job
[2025-05-26 10:03:33] 2025-05-26 01:03:20,619 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 10:03:33] 2025-05-26 01:03:20,619 | INFO     | **************************************
[2025-05-26 10:03:33] 2025-05-26 01:03:20,619 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 10:03:33] 2025-05-26 01:03:20,619 | INFO     | **************************************
[2025-05-26 10:03:33] 2025-05-26 01:03:20,619 | INFO     | 
[2025-05-26 10:03:33] 2025-05-26 01:03:20,620 | INFO     | architecture information:
[2025-05-26 10:03:33] 2025-05-26 01:03:20,620 | INFO     | executing command: cat /etc/os-release
[2025-05-26 10:03:33] 2025-05-26 01:03:20,625 | INFO     | cat /etc/os-release:
[2025-05-26 10:03:33] NAME="CentOS Linux"
[2025-05-26 10:03:33] VERSION="7 (Core)"
[2025-05-26 10:03:33] ID="centos"
[2025-05-26 10:03:33] ID_LIKE="rhel fedora"
[2025-05-26 10:03:33] VERSION_ID="7"
[2025-05-26 10:03:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 10:03:33] ANSI_COLOR="0;31"
[2025-05-26 10:03:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 10:03:33] HOME_URL="https://www.centos.org/"
[2025-05-26 10:03:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 10:03:33] 
[2025-05-26 10:03:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 10:03:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 10:03:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 10:03:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 10:03:33] 
[2025-05-26 10:03:33] 2025-05-26 01:03:20,625 | INFO     | **************************************
[2025-05-26 10:03:33] 2025-05-26 01:03:21,128 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-05-26 10:03:33] 2025-05-26 01:03:21,134 | INFO     | sufficient remaining disk space (114383912960 B)
[2025-05-26 10:03:33] 2025-05-26 01:03:21,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 10:03:33] 2025-05-26 01:03:21,134 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 10:03:33] 2025-05-26 01:03:21,134 | INFO     | update_server=False
[2025-05-26 10:03:33] 2025-05-26 01:03:21,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 10:03:33] 2025-05-26 01:03:21,134 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 10:03:33] 2025-05-26 01:03:21,134 | INFO     | aborting loop
[2025-05-26 10:03:33] 2025-05-26 01:03:21,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 10:03:33] 2025-05-26 01:03:21,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 10:03:33] 2025-05-26 01:03:21,135 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 10:03:33] 2025-05-26 01:03:21,135 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 10:03:33] 2025-05-26 01:03:21,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 10:03:33] 2025-05-26 01:03:21,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 10:03:33] 2025-05-26 01:03:21,925 | INFO     | all data control threads have been joined
[2025-05-26 10:03:33] 2025-05-26 01:03:22,055 | INFO     | all payload control threads have been joined
[2025-05-26 10:03:33] 2025-05-26 01:03:22,139 | INFO     | [job] job monitor thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:22,139 | INFO     | [job] retrieve thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:22,140 | INFO     | [job] queue monitor thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:22,153 | INFO     | [data] copytool_in thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:22,308 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:22,488 | INFO     | [payload] validate_post thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:22,768 | INFO     | all job control threads have been joined
[2025-05-26 10:03:33] 2025-05-26 01:03:22,930 | INFO     | [data] control thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:23,042 | INFO     | [job] validate thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:23,060 | INFO     | [payload] control thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:23,138 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:23,140 | INFO     | [data] copytool_out thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:23,356 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:23,446 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:23,515 | INFO     | [payload] failed_post thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:23,773 | INFO     | [job] control thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:23,815 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 10:03:33] 2025-05-26 01:03:27,820 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 10:03:33] 2025-05-26 01:03:28,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458675963712)>', '<ExcThread(monitor, started 140458005079808)>']
[2025-05-26 10:03:33] 2025-05-26 01:03:29,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 10:03:33] 2025-05-26 01:03:29,175 | INFO     | [monitor] control thread has ended
[2025-05-26 10:03:33] 2025-05-26 01:03:33,846 | INFO     | all workflow threads have been joined
[2025-05-26 10:03:33] 2025-05-26 01:03:33,846 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 10:03:33] 2025-05-26 01:03:33,847 | INFO     | traces error code: 0
[2025-05-26 10:03:33] 2025-05-26 01:03:33,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 10:03:33] 2025-05-26 01:03:33,893 [wrapper] ==== pilot stdout END ====
[2025-05-26 10:03:33] 2025-05-26 01:03:33,894 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 10:03:33] 2025-05-26 01:03:33,895 [wrapper] pilotpid: 3449006
[2025-05-26 10:03:33] 2025-05-26 01:03:33,896 [wrapper] Pilot exit status: 0
[2025-05-26 10:03:33] 2025-05-26 01:03:33,900 [wrapper] pandaids: 6665679956
[2025-05-26 10:03:33] 2025-05-26 01:03:33,917 [wrapper] cleanup supervisor_pilot 3480636 3449007
[2025-05-26 10:03:33] 2025-05-26 01:03:33,918 [wrapper] Test setup, not cleaning
[2025-05-26 10:03:33] 2025-05-26 01:03:33,919 [wrapper] apfmon messages muted
[2025-05-26 10:03:33] 2025-05-26 01:03:33,920 [wrapper] ==== wrapper stdout END ====
[2025-05-26 10:03:33] 2025-05-26 01:03:33,921 [wrapper] ==== wrapper stderr END ====
[2025-05-26 10:03:33]  *** Error codes and diagnostics ***
[2025-05-26 10:03:33]     "exeErrorCode": 0,
[2025-05-26 10:03:33]     "exeErrorDiag": "",
[2025-05-26 10:03:33]     "pilotErrorCode": 0,
[2025-05-26 10:03:33]     "pilotErrorDiag": "",
[2025-05-26 10:03:33]  *** Listing of results directory ***
[2025-05-26 10:03:33] total 417260
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc    495897 May 25 05:45 pilot3.tar.gz
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc      5111 May 25 06:02 queuedata.json
[2025-05-26 10:03:33] -rwx------. 1 boinc boinc     37140 May 25 06:03 runpilot2-wrapper.sh
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc       100 May 26 07:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 10:03:33] -rwxr-xr-x. 1 boinc boinc      7986 May 26 07:37 run_atlas
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc       105 May 26 07:37 job.xml
[2025-05-26 10:03:33] -rw-r--r--. 2 boinc boinc     15093 May 26 07:37 start_atlas.sh
[2025-05-26 10:03:33] drwxrwx--x. 2 boinc boinc        68 May 26 07:37 shared
[2025-05-26 10:03:33] -rw-r--r--. 2 boinc boinc    508875 May 26 07:37 input.tar.gz
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc      9345 May 26 07:37 init_data.xml
[2025-05-26 10:03:33] -rw-r--r--. 2 boinc boinc 223250333 May 26 07:37 EVNT.44871834._000954.pool.root.1
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc         0 May 26 07:37 boinc_lockfile
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc      2558 May 26 07:37 pandaJob.out
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc    990803 May 26 07:38 agis_schedconf.cvmfs.json
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc   1596740 May 26 07:38 agis_ddmendpoints.agis.ALL.json
[2025-05-26 10:03:33] drwx------. 4 boinc boinc      4096 May 26 07:38 pilot3
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc 197918403 May 26 10:02 HITS.44871837._023930.pool.root.1
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc      8192 May 26 10:03 boinc_mmap_file
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc        27 May 26 10:03 wrapper_checkpoint.txt
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc      1020 May 26 10:03 memory_monitor_summary.json
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc       529 May 26 10:03 boinc_task_state.xml
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc        95 May 26 10:03 pilot_heartbeat.json
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc    307778 May 26 10:03 log.44871837._023930.job.log.tgz.1
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc      7665 May 26 10:03 heartbeat.json
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc      4477 May 26 10:03 pilotlog.txt
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc    835293 May 26 10:03 log.44871837._023930.job.log.1
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc       357 May 26 10:03 output.list
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc       620 May 26 10:03 runtime_log
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc   1157120 May 26 10:03 result.tar.gz
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc      8607 May 26 10:03 runtime_log.err
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc       640 May 26 10:03 6u5LDmWCBd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQbSKDmsi0yHm.diag
[2025-05-26 10:03:33] -rw-r--r--. 1 boinc boinc     20843 May 26 10:03 stderr.txt
[2025-05-26 10:03:33] HITS file was successfully produced:
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc 197918403 May 26 10:02 shared/HITS.pool.root.1
[2025-05-26 10:03:33]  *** Contents of shared directory: ***
[2025-05-26 10:03:33] total 412952
[2025-05-26 10:03:33] -rw-r--r--. 2 boinc boinc     15093 May 26 07:37 start_atlas.sh
[2025-05-26 10:03:33] -rw-r--r--. 2 boinc boinc    508875 May 26 07:37 input.tar.gz
[2025-05-26 10:03:33] -rw-r--r--. 2 boinc boinc 223250333 May 26 07:37 ATLAS.root_0
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc 197918403 May 26 10:02 HITS.pool.root.1
[2025-05-26 10:03:33] -rw-------. 1 boinc boinc   1157120 May 26 10:03 result.tar.gz
10:03:35 (3445316): run_atlas exited; CPU time 47660.780953
10:03:35 (3445316): called boinc_finish(0)

</stderr_txt>
]]>

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