Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:25:21 (10445): wrapper (7.7.26015): starting
18:25:21 (10445): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 18:25:21] Arguments: --nthreads 8
[2025-05-25 18:25:21] Threads: 8
[2025-05-25 18:25:21] Checking for CVMFS
[2025-05-25 18:25:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 18:25:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 18:25:22] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 18:25:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 18:25:23] 2.11.2.0 22062 19226 96708 146408 3 16 18613626 25165824 1883 130560 0 11022967 99.754 12651188 1691 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-25 18:25:23] CVMFS is ok
[2025-05-25 18:25:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 18:25:23] Checking for apptainer binary...
[2025-05-25 18:25:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 18:25:23] Running /usr/bin/apptainer --version
[2025-05-25 18:25:23] apptainer version 1.3.2-1.el7
[2025-05-25 18:25:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 18:28:57] cg-vwn481.simple-grid.lan
[2025-05-25 18:28:57] apptainer works
[2025-05-25 18:28:57] Set ATHENA_PROC_NUMBER=8
[2025-05-25 18:28:57] Set ATHENA_CORE_NUMBER=8
[2025-05-25 18:28:58] Starting ATLAS job with PandaID=6665681871
[2025-05-25 18:28:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 06:12:37]  *** The last 200 lines of the pilot log: ***
[2025-05-26 06:12:37] 2025-05-25 20:58:25,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 06:12:37] 2025-05-25 20:58:25,589 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 06:12:37] 2025-05-25 20:58:25,594 | INFO     | fitting pss+swap vs Time
[2025-05-26 06:12:37] 2025-05-25 20:58:25,594 | INFO     | sum of square deviations: 5640782972.0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,596 | INFO     | sum of deviations: -39314702886.000015
[2025-05-26 06:12:37] 2025-05-25 20:58:25,597 | INFO     | mean x: 1748198597.0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,597 | INFO     | mean y: 2513417.8517110264
[2025-05-26 06:12:37] 2025-05-25 20:58:25,597 | INFO     | -- intersect: 12186975888.38852
[2025-05-26 06:12:37] 2025-05-25 20:58:25,597 | INFO     | intersect: 12186975888.38852
[2025-05-26 06:12:37] 2025-05-25 20:58:25,597 | INFO     | chi2: 2.4681144859823574
[2025-05-26 06:12:37] 2025-05-25 20:58:25,606 | INFO     | sum of square deviations: 5325139844.5
[2025-05-26 06:12:37] 2025-05-25 20:58:25,608 | INFO     | sum of deviations: -21062873976.000004
[2025-05-26 06:12:37] 2025-05-25 20:58:25,608 | INFO     | mean x: 1748198444.5
[2025-05-26 06:12:37] 2025-05-25 20:58:25,609 | INFO     | mean y: 2522106.7054263568
[2025-05-26 06:12:37] 2025-05-25 20:58:25,609 | INFO     | -- intersect: 6917285774.287591
[2025-05-26 06:12:37] 2025-05-25 20:58:25,609 | INFO     | intersect: 6917285774.287591
[2025-05-26 06:12:37] 2025-05-25 20:58:25,609 | INFO     | chi2: 1.6990577039563808
[2025-05-26 06:12:37] 2025-05-25 20:58:25,609 | INFO     | current chi2=1.6990577039563808 (change=31.159688352944336 %)
[2025-05-26 06:12:37] 2025-05-25 20:58:25,610 | INFO     | sum of square deviations: 5021496942.0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,612 | INFO     | sum of deviations: -20454931932.999996
[2025-05-26 06:12:37] 2025-05-25 20:58:25,612 | INFO     | mean x: 1748198292.0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,612 | INFO     | mean y: 2522412.0790513833
[2025-05-26 06:12:37] 2025-05-25 20:58:25,612 | INFO     | -- intersect: 7123760855.769982
[2025-05-26 06:12:37] 2025-05-25 20:58:25,612 | INFO     | intersect: 7123760855.769982
[2025-05-26 06:12:37] 2025-05-25 20:58:25,612 | INFO     | chi2: 1.6981032164024454
[2025-05-26 06:12:37] 2025-05-25 20:58:25,613 | INFO     | current chi2=1.6981032164024454 (change=0.05617746540995938 %)
[2025-05-26 06:12:37] 2025-05-25 20:58:25,613 | INFO     | right removable region: 252
[2025-05-26 06:12:37] 2025-05-25 20:58:25,613 | INFO     | sum of square deviations: 5325139844.5
[2025-05-26 06:12:37] 2025-05-25 20:58:25,615 | INFO     | sum of deviations: -79096655158.0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,615 | INFO     | mean x: 1748198749.5
[2025-05-26 06:12:37] 2025-05-25 20:58:25,615 | INFO     | mean y: 2532467.1395348837
[2025-05-26 06:12:37] 2025-05-25 20:58:25,615 | INFO     | -- intersect: 25969300979.268948
[2025-05-26 06:12:37] 2025-05-25 20:58:25,616 | INFO     | intersect: 25969300979.268948
[2025-05-26 06:12:37] 2025-05-25 20:58:25,616 | INFO     | chi2: 1.013791372618725
[2025-05-26 06:12:37] 2025-05-25 20:58:25,616 | INFO     | current chi2=1.013791372618725 (change=58.9244592024986 %)
[2025-05-26 06:12:37] 2025-05-25 20:58:25,616 | INFO     | sum of square deviations: 5021496942.0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,618 | INFO     | sum of deviations: -74630323669.0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,619 | INFO     | mean x: 1748198902.0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,619 | INFO     | mean y: 2530204.1027667983
[2025-05-26 06:12:37] 2025-05-25 20:58:25,619 | INFO     | -- intersect: 25984553373.888145
[2025-05-26 06:12:37] 2025-05-25 20:58:25,619 | INFO     | intersect: 25984553373.888145
[2025-05-26 06:12:37] 2025-05-25 20:58:25,619 | INFO     | chi2: 1.0038587935814853
[2025-05-26 06:12:37] 2025-05-25 20:58:25,619 | INFO     | current chi2=1.0038587935814853 (change=0.97974586344949 %)
[2025-05-26 06:12:37] 2025-05-25 20:58:25,619 | INFO     | left removable region: 20
[2025-05-26 06:12:37] 2025-05-25 20:58:25,620 | INFO     | sum of square deviations: 3871990738.0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,621 | INFO     | sum of deviations: -39891840447.49999
[2025-05-26 06:12:37] 2025-05-25 20:58:25,622 | INFO     | mean x: 1748198871.5
[2025-05-26 06:12:37] 2025-05-25 20:58:25,622 | INFO     | mean y: 2531609.599137931
[2025-05-26 06:12:37] 2025-05-25 20:58:25,622 | INFO     | -- intersect: 18013646607.358604
[2025-05-26 06:12:37] 2025-05-25 20:58:25,622 | INFO     | intersect: 18013646607.358604
[2025-05-26 06:12:37] 2025-05-25 20:58:25,622 | INFO     | chi2: 0.18974514061883105
[2025-05-26 06:12:37] 2025-05-25 20:58:25,622 | INFO     | -- intersect: 18013646607.358604
[2025-05-26 06:12:37] 2025-05-25 20:58:25,622 | INFO     | current memory leak: -10.30 B/s (using 232 data points, chi2=0.19)
[2025-05-26 06:12:37] 2025-05-25 20:58:25,623 | INFO     | ..............................
[2025-05-26 06:12:37] 2025-05-25 20:58:25,623 | INFO     | . Timing measurements:
[2025-05-26 06:12:37] 2025-05-25 20:58:25,623 | INFO     | . get job = 0 s
[2025-05-26 06:12:37] 2025-05-25 20:58:25,623 | INFO     | . initial setup = 2 s
[2025-05-26 06:12:37] 2025-05-25 20:58:25,623 | INFO     | . payload setup = 11 s
[2025-05-26 06:12:37] 2025-05-25 20:58:25,623 | INFO     | . stage-in = 0 s
[2025-05-26 06:12:37] 2025-05-25 20:58:25,624 | INFO     | . payload execution = 16019 s
[2025-05-26 06:12:37] 2025-05-25 20:58:25,624 | INFO     | . stage-out = 3 s
[2025-05-26 06:12:37] 2025-05-25 20:58:25,624 | INFO     | . log creation = 1 s
[2025-05-26 06:12:37] 2025-05-25 20:58:25,624 | INFO     | ..............................
[2025-05-26 06:12:37] 2025-05-25 20:58:25,917 | INFO     | 
[2025-05-26 06:12:37] 2025-05-25 20:58:25,917 | INFO     | job summary report
[2025-05-26 06:12:37] 2025-05-25 20:58:25,917 | INFO     | --------------------------------------------------
[2025-05-26 06:12:37] 2025-05-25 20:58:25,917 | INFO     | PanDA job id: 6665681871
[2025-05-26 06:12:37] 2025-05-25 20:58:25,917 | INFO     | task id: 44871837
[2025-05-26 06:12:37] 2025-05-25 20:58:25,917 | INFO     | errors: (none)
[2025-05-26 06:12:37] 2025-05-25 20:58:25,917 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 06:12:37] 2025-05-25 20:58:25,917 | INFO     | pilot state: finished 
[2025-05-26 06:12:37] 2025-05-25 20:58:25,917 | INFO     | transexitcode: 0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | exeerrorcode: 0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | exeerrordiag: 
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | exitcode: 0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | exitmsg: OK
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | cpuconsumptiontime: 62146 s
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | nevents: 400
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | neventsw: 0
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | pid: 24778
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | pgrp: 24778
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | corecount: 8
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | event service: False
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | sizes: {0: 2393571, 1: 2393770, 9: 2393976, 12: 2394004, 16035: 2424756, 16038: 2433883, 16128: 2433997}
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | --------------------------------------------------
[2025-05-26 06:12:37] 2025-05-25 20:58:25,918 | INFO     | 
[2025-05-26 06:12:37] 2025-05-25 20:58:25,919 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-05-26 06:12:37] 2025-05-25 20:58:26,413 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 06:12:37] 2025-05-25 20:58:26,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 06:12:37] 2025-05-25 20:58:26,415 | INFO     | job 6665681871 has completed (purged errors)
[2025-05-26 06:12:37] 2025-05-25 20:58:26,415 | INFO     | overall cleanup function is called
[2025-05-26 06:12:37] 2025-05-25 20:58:27,004 | INFO     | PID=17409 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-26 06:12:37] 2025-05-25 20:58:27,004 | INFO     | .. there are 9 such processes running
[2025-05-26 06:12:37] 2025-05-25 20:58:27,424 | INFO     | --- collectZombieJob: --- 10, [24778]
[2025-05-26 06:12:37] 2025-05-25 20:58:27,424 | INFO     | zombie collector waiting for pid 24778
[2025-05-26 06:12:37] 2025-05-25 20:58:27,424 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 06:12:37] 2025-05-25 20:58:27,424 | INFO     | collected zombie processes
[2025-05-26 06:12:37] 2025-05-25 20:58:27,424 | INFO     | will attempt to kill all subprocesses of pid=24778
[2025-05-26 06:12:37] 2025-05-25 20:58:27,511 | INFO     | process IDs to be killed: [24778] (in reverse order)
[2025-05-26 06:12:37] 2025-05-25 20:58:28,337 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 06:12:37] 2025-05-25 20:58:28,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 06:12:37] 2025-05-25 20:58:28,340 | INFO     | did not find any defunct processes belonging to 24778
[2025-05-26 06:12:37] 2025-05-25 20:58:28,342 | INFO     | did not find any defunct processes belonging to 24778
[2025-05-26 06:12:37] 2025-05-25 20:58:28,343 | INFO     | ready for new job
[2025-05-26 06:12:37] 2025-05-25 20:58:28,343 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 06:12:37] 2025-05-25 20:58:28,345 | INFO     | **************************************
[2025-05-26 06:12:37] 2025-05-25 20:58:28,345 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 06:12:37] 2025-05-25 20:58:28,345 | INFO     | **************************************
[2025-05-26 06:12:37] 2025-05-25 20:58:28,345 | INFO     | 
[2025-05-26 06:12:37] 2025-05-25 20:58:28,345 | INFO     | pilot is running in a VM
[2025-05-26 06:12:37] 2025-05-25 20:58:28,345 | INFO     | architecture information:
[2025-05-26 06:12:37] 2025-05-25 20:58:28,352 | INFO     | executing command: cat /etc/os-release
[2025-05-26 06:12:37] 2025-05-25 20:58:28,587 | INFO     | cat /etc/os-release:
[2025-05-26 06:12:37] NAME="CentOS Linux"
[2025-05-26 06:12:37] VERSION="7 (Core)"
[2025-05-26 06:12:37] ID="centos"
[2025-05-26 06:12:37] ID_LIKE="rhel fedora"
[2025-05-26 06:12:37] VERSION_ID="7"
[2025-05-26 06:12:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 06:12:37] ANSI_COLOR="0;31"
[2025-05-26 06:12:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 06:12:37] HOME_URL="https://www.centos.org/"
[2025-05-26 06:12:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 06:12:37] 
[2025-05-26 06:12:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 06:12:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 06:12:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 06:12:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 06:12:37] 
[2025-05-26 06:12:37] 2025-05-25 20:58:28,587 | INFO     | **************************************
[2025-05-26 06:12:37] 2025-05-25 20:58:29,091 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-05-26 06:12:37] 2025-05-25 20:58:29,242 | INFO     | sufficient remaining disk space (494794702848 B)
[2025-05-26 06:12:37] 2025-05-25 20:58:29,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 06:12:37] 2025-05-25 20:58:29,243 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 06:12:37] 2025-05-25 20:58:29,243 | INFO     | update_server=False
[2025-05-26 06:12:37] 2025-05-25 20:58:29,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 06:12:37] 2025-05-25 20:58:29,243 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 06:12:37] 2025-05-25 20:58:29,243 | INFO     | aborting loop
[2025-05-26 06:12:37] 2025-05-25 20:58:29,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 06:12:37] 2025-05-25 20:58:29,245 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 06:12:37] 2025-05-25 20:58:29,245 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 06:12:37] 2025-05-25 20:58:29,245 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 06:12:37] 2025-05-25 20:58:29,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 06:12:37] 2025-05-25 20:58:29,271 | INFO     | all job control threads have been joined
[2025-05-26 06:12:37] 2025-05-25 20:58:29,330 | INFO     | all payload control threads have been joined
[2025-05-26 06:12:37] 2025-05-25 20:58:30,137 | INFO     | all data control threads have been joined
[2025-05-26 06:12:37] 2025-05-25 20:58:30,249 | INFO     | [job] job monitor thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:30,249 | INFO     | [job] retrieve thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:30,252 | INFO     | [data] copytool_in thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:30,277 | INFO     | [job] control thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:30,336 | INFO     | [payload] control thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:30,568 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:30,766 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 06:12:37] 2025-05-25 20:58:30,870 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:30,905 | INFO     | [job] validate thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:31,143 | INFO     | [data] control thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:31,251 | INFO     | [data] copytool_out thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:31,324 | INFO     | [payload] validate_post thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:31,509 | INFO     | [payload] failed_post thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:31,719 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:31,772 | INFO     | [job] queue monitor thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:31,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 06:12:37] 2025-05-25 20:58:35,934 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:39,752 | INFO     | job.realtimelogging is not enabled
[2025-05-26 06:12:37] 2025-05-25 20:58:40,758 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 06:12:37] 2025-05-25 20:58:42,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018457282368)>', '<ExcThread(monitor, started 140017871611648)>']
[2025-05-26 06:12:37] 2025-05-25 20:58:43,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 06:12:37] 2025-05-25 20:58:43,329 | INFO     | [monitor] control thread has ended
[2025-05-26 06:12:37] 2025-05-25 20:58:47,412 | INFO     | all workflow threads have been joined
[2025-05-26 06:12:37] 2025-05-25 20:58:47,412 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 06:12:37] 2025-05-25 20:58:47,412 | INFO     | traces error code: 0
[2025-05-26 06:12:37] 2025-05-25 20:58:47,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 06:12:37] 2025-05-25 20:58:47,699 [wrapper] ==== pilot stdout END ====
[2025-05-26 06:12:37] 2025-05-25 20:58:47,756 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 06:12:37] 2025-05-25 20:58:47,849 [wrapper] pilotpid: 17409
[2025-05-26 06:12:37] 2025-05-25 20:58:47,933 [wrapper] Pilot exit status: 0
[2025-05-26 06:12:37] 2025-05-25 20:58:48,418 [wrapper] pandaids: 6665681871
[2025-05-26 06:12:37] 2025-05-25 20:58:49,036 [wrapper] cleanup supervisor_pilot  7091 17410
[2025-05-26 06:12:37] 2025-05-25 20:58:49,094 [wrapper] Test setup, not cleaning
[2025-05-26 06:12:37] 2025-05-25 20:58:49,178 [wrapper] apfmon messages muted
[2025-05-26 06:12:37] 2025-05-25 20:58:49,213 [wrapper] ==== wrapper stdout END ====
[2025-05-26 06:12:37] 2025-05-25 20:58:49,276 [wrapper] ==== wrapper stderr END ====
[2025-05-26 06:12:37]  *** Error codes and diagnostics ***
[2025-05-26 06:12:37]     "exeErrorCode": 0,
[2025-05-26 06:12:37]     "exeErrorDiag": "",
[2025-05-26 06:12:37]     "pilotErrorCode": 0,
[2025-05-26 06:12:37]     "pilotErrorDiag": "",
[2025-05-26 06:12:37]  *** Listing of results directory ***
[2025-05-26 06:12:37] total 414764
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc    495897 May 25 00:30 pilot3.tar.gz
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc      5111 May 25 00:41 queuedata.json
[2025-05-26 06:12:37] -rwx------. 1 boinc boinc     37140 May 25 00:41 runpilot2-wrapper.sh
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc       100 May 25 18:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 06:12:37] -rwxr-xr-x. 1 boinc boinc      7986 May 25 18:25 run_atlas
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc       105 May 25 18:25 job.xml
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc      6373 May 25 18:25 init_data.xml
[2025-05-26 06:12:37] -rw-r--r--. 2 boinc boinc 224986909 May 25 18:25 EVNT.44871834._001003.pool.root.1
[2025-05-26 06:12:37] -rw-r--r--. 2 boinc boinc     15093 May 25 18:25 start_atlas.sh
[2025-05-26 06:12:37] drwxrwx--x. 2 boinc boinc        68 May 25 18:25 shared
[2025-05-26 06:12:37] -rw-r--r--. 2 boinc boinc    508876 May 25 18:25 input.tar.gz
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc         0 May 25 18:25 boinc_lockfile
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc      2559 May 25 18:28 pandaJob.out
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc    990811 May 25 18:29 agis_schedconf.cvmfs.json
[2025-05-26 06:12:37] drwx------. 4 boinc boinc      4096 May 25 18:29 pilot3
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc 192327087 May 25 22:55 HITS.44871837._025162.pool.root.1
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc       531 May 25 22:55 boinc_task_state.xml
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc      1016 May 25 22:56 memory_monitor_summary.json
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc   1596740 May 25 22:56 agis_ddmendpoints.agis.ALL.json
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc    404596 May 25 22:56 log.44871837._025162.job.log.tgz.1
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc        95 May 25 22:57 pilot_heartbeat.json
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc      7687 May 25 22:58 heartbeat.json
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc      4612 May 25 22:58 pilotlog.txt
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc   1390933 May 25 22:58 log.44871837._025162.job.log.1
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc       357 May 25 22:58 output.list
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc       620 May 25 22:58 runtime_log
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc   1812480 May 25 22:58 result.tar.gz
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc      8673 May 25 22:58 runtime_log.err
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc       657 May 25 22:58 RDIODmSjCd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtTNKDmRnxGVn.diag
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc      8192 May 26 06:12 boinc_mmap_file
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc        28 May 26 06:12 wrapper_checkpoint.txt
[2025-05-26 06:12:37] -rw-r--r--. 1 boinc boinc     20568 May 26 06:12 stderr.txt
[2025-05-26 06:12:37] HITS file was successfully produced:
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc 192327087 May 25 22:55 shared/HITS.pool.root.1
[2025-05-26 06:12:37]  *** Contents of shared directory: ***
[2025-05-26 06:12:37] total 409824
[2025-05-26 06:12:37] -rw-r--r--. 2 boinc boinc 224986909 May 25 18:25 ATLAS.root_0
[2025-05-26 06:12:37] -rw-r--r--. 2 boinc boinc     15093 May 25 18:25 start_atlas.sh
[2025-05-26 06:12:37] -rw-r--r--. 2 boinc boinc    508876 May 25 18:25 input.tar.gz
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc 192327087 May 25 22:55 HITS.pool.root.1
[2025-05-26 06:12:37] -rw-------. 1 boinc boinc   1812480 May 25 22:58 result.tar.gz
06:12:39 (10445): run_atlas exited; CPU time 62337.557627
06:12:39 (10445): called boinc_finish(0)

</stderr_txt>
]]>

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