Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:55:40 (641670): wrapper (7.7.26015): starting
04:55:40 (641670): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 04:55:40] Arguments: --nthreads 8
[2025-05-25 04:55:40] Threads: 8
[2025-05-25 04:55:40] Checking for CVMFS
[2025-05-25 04:55:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 04:55:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 04:55:41] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 04:55:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 04:55:41] 2.12.6.0 1062744 8634 274948 146395 1 404 25303912 32935937 23469 16776704 0 35250727 99.537 41815766 35035 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 04:55:41] CVMFS is ok
[2025-05-25 04:55:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 04:55:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 04:55:41] Further information can be found at the LHC@home message board.
[2025-05-25 04:55:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 04:55:41] Checking for apptainer binary...
[2025-05-25 04:55:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 04:55:41] Running /usr/bin/apptainer --version
[2025-05-25 04:55:42] apptainer version 1.4.1-1.el9
[2025-05-25 04:55:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 04:55:42] c6-4-5-2.aglt2.org
[2025-05-25 04:55:42] apptainer works
[2025-05-25 04:55:42] Set ATHENA_PROC_NUMBER=8
[2025-05-25 04:55:42] Set ATHENA_CORE_NUMBER=8
[2025-05-25 04:55:42] Starting ATLAS job with PandaID=6665714683
[2025-05-25 04:55:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 08:43:42]  *** The last 200 lines of the pilot log: ***
[2025-05-25 08:43:42] 2025-05-25 12:43:22,543 | INFO     | mean y: 2087480.2818181817
[2025-05-25 08:43:42] 2025-05-25 12:43:22,543 | INFO     | -- intersect: -53938632433.84789
[2025-05-25 08:43:42] 2025-05-25 12:43:22,543 | INFO     | intersect: -53938632433.84789
[2025-05-25 08:43:42] 2025-05-25 12:43:22,543 | INFO     | chi2: 3.135086392881327
[2025-05-25 08:43:42] 2025-05-25 12:43:22,543 | INFO     | sum of square deviations: 3081498763.693015
[2025-05-25 08:43:42] 2025-05-25 12:43:22,545 | INFO     | sum of deviations: 100456919480.68839
[2025-05-25 08:43:42] 2025-05-25 12:43:22,545 | INFO     | mean x: 1748170102.283721
[2025-05-25 08:43:42] 2025-05-25 12:43:22,545 | INFO     | mean y: 2086485.9395348837
[2025-05-25 08:43:42] 2025-05-25 12:43:22,545 | INFO     | -- intersect: -56988292764.83655
[2025-05-25 08:43:42] 2025-05-25 12:43:22,545 | INFO     | intersect: -56988292764.83655
[2025-05-25 08:43:42] 2025-05-25 12:43:22,545 | INFO     | chi2: 3.1190300403590054
[2025-05-25 08:43:42] 2025-05-25 12:43:22,545 | INFO     | current chi2=3.1190300403590054 (change=0.5121502411793086 %)
[2025-05-25 08:43:42] 2025-05-25 12:43:22,545 | INFO     | right removable region: 214
[2025-05-25 08:43:42] 2025-05-25 12:43:22,546 | INFO     | sum of square deviations: 3081474120.120942
[2025-05-25 08:43:42] 2025-05-25 12:43:22,547 | INFO     | sum of deviations: 53485673618.66975
[2025-05-25 08:43:42] 2025-05-25 12:43:22,547 | INFO     | mean x: 1748170407.288372
[2025-05-25 08:43:42] 2025-05-25 12:43:22,547 | INFO     | mean y: 2120904.827906977
[2025-05-25 08:43:42] 2025-05-25 12:43:22,547 | INFO     | -- intersect: -30341172009.270313
[2025-05-25 08:43:42] 2025-05-25 12:43:22,547 | INFO     | intersect: -30341172009.270313
[2025-05-25 08:43:42] 2025-05-25 12:43:22,548 | INFO     | chi2: 0.5506280091899866
[2025-05-25 08:43:42] 2025-05-25 12:43:22,548 | INFO     | current chi2=0.5506280091899866 (change=82.43659216408619 %)
[2025-05-25 08:43:42] 2025-05-25 12:43:22,548 | INFO     | sum of square deviations: 2871414062.195251
[2025-05-25 08:43:42] 2025-05-25 12:43:22,549 | INFO     | sum of deviations: 32849226761.261883
[2025-05-25 08:43:42] 2025-05-25 12:43:22,549 | INFO     | mean x: 1748170559.795238
[2025-05-25 08:43:42] 2025-05-25 12:43:22,549 | INFO     | mean y: 2135823.261904762
[2025-05-25 08:43:42] 2025-05-25 12:43:22,550 | INFO     | -- intersect: -19997087518.345814
[2025-05-25 08:43:42] 2025-05-25 12:43:22,550 | INFO     | intersect: -19997087518.345814
[2025-05-25 08:43:42] 2025-05-25 12:43:22,550 | INFO     | chi2: 0.1264385479716593
[2025-05-25 08:43:42] 2025-05-25 12:43:22,550 | INFO     | current chi2=0.1264385479716593 (change=77.03739260237424 %)
[2025-05-25 08:43:42] 2025-05-25 12:43:22,550 | INFO     | sum of square deviations: 2671147126.439033
[2025-05-25 08:43:42] 2025-05-25 12:43:22,551 | INFO     | sum of deviations: 28585677244.804874
[2025-05-25 08:43:42] 2025-05-25 12:43:22,552 | INFO     | mean x: 1748170712.292683
[2025-05-25 08:43:42] 2025-05-25 12:43:22,552 | INFO     | mean y: 2139019.3365853657
[2025-05-25 08:43:42] 2025-05-25 12:43:22,552 | INFO     | -- intersect: -18706169203.66981
[2025-05-25 08:43:42] 2025-05-25 12:43:22,552 | INFO     | intersect: -18706169203.66981
[2025-05-25 08:43:42] 2025-05-25 12:43:22,552 | INFO     | chi2: 0.08714936070401401
[2025-05-25 08:43:42] 2025-05-25 12:43:22,552 | INFO     | current chi2=0.08714936070401401 (change=31.073741274260602 %)
[2025-05-25 08:43:42] 2025-05-25 12:43:22,553 | INFO     | sum of square deviations: 2480440384.319988
[2025-05-25 08:43:42] 2025-05-25 12:43:22,554 | INFO     | sum of deviations: 25113348581.36
[2025-05-25 08:43:42] 2025-05-25 12:43:22,554 | INFO     | mean x: 1748170864.78
[2025-05-25 08:43:42] 2025-05-25 12:43:22,554 | INFO     | mean y: 2141816.44
[2025-05-25 08:43:42] 2025-05-25 12:43:22,554 | INFO     | -- intersect: -17697305662.533997
[2025-05-25 08:43:42] 2025-05-25 12:43:22,554 | INFO     | intersect: -17697305662.533997
[2025-05-25 08:43:42] 2025-05-25 12:43:22,554 | INFO     | chi2: 0.0765843481255912
[2025-05-25 08:43:42] 2025-05-25 12:43:22,554 | INFO     | current chi2=0.0765843481255912 (change=12.122880183028348 %)
[2025-05-25 08:43:42] 2025-05-25 12:43:22,554 | INFO     | left removable region: 40
[2025-05-25 08:43:42] 2025-05-25 12:43:22,555 | INFO     | sum of square deviations: 1633330292.2586265
[2025-05-25 08:43:42] 2025-05-25 12:43:22,555 | INFO     | sum of deviations: 16465405370.189655
[2025-05-25 08:43:42] 2025-05-25 12:43:22,556 | INFO     | mean x: 1748171291.775862
[2025-05-25 08:43:42] 2025-05-25 12:43:22,556 | INFO     | mean y: 2150133.5689655175
[2025-05-25 08:43:42] 2025-05-25 12:43:22,556 | INFO     | -- intersect: -17620953479.977352
[2025-05-25 08:43:42] 2025-05-25 12:43:22,556 | INFO     | intersect: -17620953479.977352
[2025-05-25 08:43:42] 2025-05-25 12:43:22,556 | INFO     | chi2: 0.0601204822617505
[2025-05-25 08:43:42] 2025-05-25 12:43:22,556 | INFO     | -- intersect: -17620953479.977352
[2025-05-25 08:43:42] 2025-05-25 12:43:22,556 | INFO     | current memory leak: 10.08 B/s (using 174 data points, chi2=0.06)
[2025-05-25 08:43:42] 2025-05-25 12:43:22,557 | INFO     | ..............................
[2025-05-25 08:43:42] 2025-05-25 12:43:22,557 | INFO     | . Timing measurements:
[2025-05-25 08:43:42] 2025-05-25 12:43:22,557 | INFO     | . get job = 0 s
[2025-05-25 08:43:42] 2025-05-25 12:43:22,557 | INFO     | . initial setup = 7 s
[2025-05-25 08:43:42] 2025-05-25 12:43:22,557 | INFO     | . payload setup = 50 s
[2025-05-25 08:43:42] 2025-05-25 12:43:22,558 | INFO     | . stage-in = 0 s
[2025-05-25 08:43:42] 2025-05-25 12:43:22,558 | INFO     | . payload execution = 13427 s
[2025-05-25 08:43:42] 2025-05-25 12:43:22,558 | INFO     | . stage-out = 4 s
[2025-05-25 08:43:42] 2025-05-25 12:43:22,558 | INFO     | . log creation = 0 s
[2025-05-25 08:43:42] 2025-05-25 12:43:22,558 | INFO     | ..............................
[2025-05-25 08:43:42] 2025-05-25 12:43:22,673 | INFO     | 
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | job summary report
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | --------------------------------------------------
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | PanDA job id: 6665714683
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | task id: 44871837
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | errors: (none)
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | pilot state: finished 
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | transexitcode: 0
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | exeerrorcode: 0
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | exeerrordiag: 
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | exitcode: 0
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | exitmsg: OK
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | cpuconsumptiontime: 44655 s
[2025-05-25 08:43:42] 2025-05-25 12:43:22,674 | INFO     | nevents: 400
[2025-05-25 08:43:42] 2025-05-25 12:43:22,675 | INFO     | neventsw: 0
[2025-05-25 08:43:42] 2025-05-25 12:43:22,675 | INFO     | pid: 688055
[2025-05-25 08:43:42] 2025-05-25 12:43:22,675 | INFO     | pgrp: 688055
[2025-05-25 08:43:42] 2025-05-25 12:43:22,675 | INFO     | corecount: 8
[2025-05-25 08:43:42] 2025-05-25 12:43:22,675 | INFO     | event service: False
[2025-05-25 08:43:42] 2025-05-25 12:43:22,675 | INFO     | sizes: {0: 2393569, 1: 2393768, 2: 2393768, 13: 2393796, 24: 2393852, 29: 2394086, 35: 2394242, 13482: 2424163, 13484: 2424162, 13489: 2433159, 13490: 2433215, 135
[2025-05-25 08:43:42] 2025-05-25 12:43:22,675 | INFO     | --------------------------------------------------
[2025-05-25 08:43:42] 2025-05-25 12:43:22,675 | INFO     | 
[2025-05-25 08:43:42] 2025-05-25 12:43:22,675 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-25 08:43:42] 2025-05-25 12:43:22,754 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,756 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 08:43:42] 2025-05-25 12:43:22,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,756 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 08:43:42] 2025-05-25 12:43:22,756 | INFO     | job 6665714683 has completed (purged errors)
[2025-05-25 08:43:42] 2025-05-25 12:43:22,756 | INFO     | overall cleanup function is called
[2025-05-25 08:43:42] 2025-05-25 12:43:23,768 | INFO     | --- collectZombieJob: --- 10, [688055]
[2025-05-25 08:43:42] 2025-05-25 12:43:23,769 | INFO     | zombie collector waiting for pid 688055
[2025-05-25 08:43:42] 2025-05-25 12:43:23,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 08:43:42] 2025-05-25 12:43:23,769 | INFO     | collected zombie processes
[2025-05-25 08:43:42] 2025-05-25 12:43:23,769 | INFO     | will attempt to kill all subprocesses of pid=688055
[2025-05-25 08:43:42] 2025-05-25 12:43:25,963 | INFO     | process IDs to be killed: [688055] (in reverse order)
[2025-05-25 08:43:42] 2025-05-25 12:43:26,202 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 08:43:42] 2025-05-25 12:43:26,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 08:43:42] 2025-05-25 12:43:26,228 | INFO     | did not find any defunct processes belonging to 688055
[2025-05-25 08:43:42] 2025-05-25 12:43:26,240 | INFO     | did not find any defunct processes belonging to 688055
[2025-05-25 08:43:42] 2025-05-25 12:43:26,241 | INFO     | ready for new job
[2025-05-25 08:43:42] 2025-05-25 12:43:26,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 08:43:42] 2025-05-25 12:43:26,269 | INFO     | **************************************
[2025-05-25 08:43:42] 2025-05-25 12:43:26,269 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 08:43:42] 2025-05-25 12:43:26,269 | INFO     | **************************************
[2025-05-25 08:43:42] 2025-05-25 12:43:26,269 | INFO     | 
[2025-05-25 08:43:42] 2025-05-25 12:43:26,337 | INFO     | architecture information:
[2025-05-25 08:43:42] 2025-05-25 12:43:26,401 | INFO     | executing command: cat /etc/os-release
[2025-05-25 08:43:42] 2025-05-25 12:43:26,480 | INFO     | cat /etc/os-release:
[2025-05-25 08:43:42] NAME="CentOS Linux"
[2025-05-25 08:43:42] VERSION="7 (Core)"
[2025-05-25 08:43:42] ID="centos"
[2025-05-25 08:43:42] ID_LIKE="rhel fedora"
[2025-05-25 08:43:42] VERSION_ID="7"
[2025-05-25 08:43:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 08:43:42] ANSI_COLOR="0;31"
[2025-05-25 08:43:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 08:43:42] HOME_URL="https://www.centos.org/"
[2025-05-25 08:43:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 08:43:42] 
[2025-05-25 08:43:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 08:43:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 08:43:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 08:43:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 08:43:42] 
[2025-05-25 08:43:42] 2025-05-25 12:43:26,480 | INFO     | **************************************
[2025-05-25 08:43:42] 2025-05-25 12:43:26,984 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-25 08:43:42] 2025-05-25 12:43:27,098 | INFO     | sufficient remaining disk space (75046584320 B)
[2025-05-25 08:43:42] 2025-05-25 12:43:27,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 08:43:42] 2025-05-25 12:43:27,098 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 08:43:42] 2025-05-25 12:43:27,098 | INFO     | update_server=False
[2025-05-25 08:43:42] 2025-05-25 12:43:27,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 08:43:42] 2025-05-25 12:43:27,098 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 08:43:42] 2025-05-25 12:43:27,099 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 08:43:42] 2025-05-25 12:43:27,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 08:43:42] 2025-05-25 12:43:27,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 08:43:42] 2025-05-25 12:43:27,143 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 08:43:42] 2025-05-25 12:43:27,144 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 08:43:42] 2025-05-25 12:43:27,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 08:43:42] 2025-05-25 12:43:27,144 | INFO     | will abort loop
[2025-05-25 08:43:42] 2025-05-25 12:43:27,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 08:43:42] 2025-05-25 12:43:27,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 08:43:42] 2025-05-25 12:43:27,836 | INFO     | all data control threads have been joined
[2025-05-25 08:43:42] 2025-05-25 12:43:27,981 | INFO     | all payload control threads have been joined
[2025-05-25 08:43:42] 2025-05-25 12:43:28,105 | INFO     | [job] retrieve thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:28,150 | INFO     | [job] job monitor thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:28,285 | INFO     | all job control threads have been joined
[2025-05-25 08:43:42] 2025-05-25 12:43:28,303 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:28,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:28,715 | INFO     | [job] queue monitor thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:28,873 | INFO     | [data] control thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:28,983 | INFO     | [payload] validate_post thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:28,987 | INFO     | [payload] control thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:29,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 08:43:42] 2025-05-25 12:43:29,146 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:29,292 | INFO     | [job] validate thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:29,293 | INFO     | [data] copytool_in thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:29,300 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:29,301 | INFO     | [job] control thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:29,390 | INFO     | [payload] failed_post thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:29,836 | INFO     | [data] copytool_out thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:33,074 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 08:43:42] 2025-05-25 12:43:35,058 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139670107834176)>', '<ExcThread(monitor, started 139669299779328)>']
[2025-05-25 08:43:42] 2025-05-25 12:43:35,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 08:43:42] 2025-05-25 12:43:35,242 | INFO     | [monitor] control thread has ended
[2025-05-25 08:43:42] 2025-05-25 12:43:40,109 | INFO     | all workflow threads have been joined
[2025-05-25 08:43:42] 2025-05-25 12:43:40,110 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 08:43:42] 2025-05-25 12:43:40,110 | INFO     | traces error code: 0
[2025-05-25 08:43:42] 2025-05-25 12:43:40,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 08:43:42] 2025-05-25 12:43:41,669 [wrapper] ==== pilot stdout END ====
[2025-05-25 08:43:42] 2025-05-25 12:43:41,685 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 08:43:42] 2025-05-25 12:43:41,688 [wrapper] pilotpid: 650883
[2025-05-25 08:43:42] 2025-05-25 12:43:41,695 [wrapper] Pilot exit status: 0
[2025-05-25 08:43:42] 2025-05-25 12:43:41,705 [wrapper] pandaids: 6665714683
[2025-05-25 08:43:42] 2025-05-25 12:43:42,105 [wrapper] cleanup supervisor_pilot 2098925 650884
[2025-05-25 08:43:42] 2025-05-25 12:43:42,118 [wrapper] Test setup, not cleaning
[2025-05-25 08:43:42] 2025-05-25 12:43:42,120 [wrapper] apfmon messages muted
[2025-05-25 08:43:42] 2025-05-25 12:43:42,142 [wrapper] ==== wrapper stdout END ====
[2025-05-25 08:43:42] 2025-05-25 12:43:42,148 [wrapper] ==== wrapper stderr END ====
[2025-05-25 08:43:42]  *** Error codes and diagnostics ***
[2025-05-25 08:43:42]     "exeErrorCode": 0,
[2025-05-25 08:43:42]     "exeErrorDiag": "",
[2025-05-25 08:43:42]     "pilotErrorCode": 0,
[2025-05-25 08:43:42]     "pilotErrorDiag": "",
[2025-05-25 08:43:42]  *** Listing of results directory ***
[2025-05-25 08:43:42] total 417848
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas    495897 May 24 22:29 pilot3.tar.gz
[2025-05-25 08:43:42] -rwx------. 1 boincer umatlas     37140 May 24 22:47 runpilot2-wrapper.sh
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas      5111 May 24 22:47 queuedata.json
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas       100 May 25 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 08:43:42] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 04:55 run_atlas
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas       105 May 25 04:55 job.xml
[2025-05-25 08:43:42] -rw-r--r--. 2 boincer umatlas 225145601 May 25 04:55 EVNT.44871834._001113.pool.root.1
[2025-05-25 08:43:42] -rw-r--r--. 2 boincer umatlas     15093 May 25 04:55 start_atlas.sh
[2025-05-25 08:43:42] drwxrwx--x. 2 boincer umatlas      4096 May 25 04:55 shared
[2025-05-25 08:43:42] -rw-r--r--. 2 boincer umatlas    508872 May 25 04:55 input.tar.gz
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas         0 May 25 04:55 boinc_lockfile
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas      2558 May 25 04:55 pandaJob.out
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas    990811 May 25 04:56 agis_schedconf.cvmfs.json
[2025-05-25 08:43:42] drwx------. 4 boincer umatlas      4096 May 25 04:57 pilot3
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas      6856 May 25 08:40 init_data.xml
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas 195841231 May 25 08:42 HITS.44871837._027934.pool.root.1
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas       531 May 25 08:42 boinc_task_state.xml
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas      1043 May 25 08:42 memory_monitor_summary.json
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas   1596740 May 25 08:43 agis_ddmendpoints.agis.ALL.json
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas    394901 May 25 08:43 log.44871837._027934.job.log.tgz.1
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas      7728 May 25 08:43 heartbeat.json
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas        95 May 25 08:43 pilot_heartbeat.json
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas      8192 May 25 08:43 boinc_mmap_file
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas        28 May 25 08:43 wrapper_checkpoint.txt
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas      4662 May 25 08:43 pilotlog.txt
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas   1132530 May 25 08:43 log.44871837._027934.job.log.1
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas       357 May 25 08:43 output.list
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas       620 May 25 08:43 runtime_log
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas   1546240 May 25 08:43 result.tar.gz
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas       655 May 25 08:43 sLsLDmuZGd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBETKDm7D6egm.diag
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas      8660 May 25 08:43 runtime_log.err
[2025-05-25 08:43:42] -rw-r--r--. 1 boincer umatlas     20922 May 25 08:43 stderr.txt
[2025-05-25 08:43:42] HITS file was successfully produced:
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas 195841231 May 25 08:42 shared/HITS.pool.root.1
[2025-05-25 08:43:42]  *** Contents of shared directory: ***
[2025-05-25 08:43:42] total 413160
[2025-05-25 08:43:42] -rw-r--r--. 2 boincer umatlas 225145601 May 25 04:55 ATLAS.root_0
[2025-05-25 08:43:42] -rw-r--r--. 2 boincer umatlas     15093 May 25 04:55 start_atlas.sh
[2025-05-25 08:43:42] -rw-r--r--. 2 boincer umatlas    508872 May 25 04:55 input.tar.gz
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas 195841231 May 25 08:42 HITS.pool.root.1
[2025-05-25 08:43:42] -rw-------. 1 boincer umatlas   1546240 May 25 08:43 result.tar.gz
08:43:44 (641670): run_atlas exited; CPU time 45117.773545
08:43:44 (641670): called boinc_finish(0)

</stderr_txt>
]]>

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