Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:53:05 (239092): wrapper (7.7.26015): starting
04:53:05 (239092): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 04:53:05] Arguments: --nthreads 8
[2025-05-25 04:53:05] Threads: 8
[2025-05-25 04:53:05] Checking for CVMFS
[2025-05-25 04:53:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 04:53:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 04:53:07] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 04:53:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 04:53:09] 2.11.2.0 7109 14167 175496 146395 2 489 16077906 18432000 22194 130560 0 49927369 99.226 74356894 35274 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 04:53:09] CVMFS is ok
[2025-05-25 04:53:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 04:53:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 04:53:09] Further information can be found at the LHC@home message board.
[2025-05-25 04:53:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 04:53:09] Checking for apptainer binary...
[2025-05-25 04:53:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 04:53:09] Running /usr/bin/apptainer --version
[2025-05-25 04:53:09] apptainer version 1.3.2-1.el7
[2025-05-25 04:53:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 04:53:42] c-211-35-2.aglt2.org
[2025-05-25 04:53:42] apptainer works
[2025-05-25 04:53:42] Set ATHENA_PROC_NUMBER=8
[2025-05-25 04:53:42] Set ATHENA_CORE_NUMBER=8
[2025-05-25 04:53:42] Starting ATLAS job with PandaID=6665713950
[2025-05-25 04:53:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 12:30:56]  *** The last 200 lines of the pilot log: ***
[2025-05-25 12:30:56] 2025-05-25 16:30:36,609 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6665713950/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 12:30:56] 2025-05-25 16:30:36,610 | INFO     | extracted standard info from prmon json
[2025-05-25 12:30:56] 2025-05-25 16:30:36,610 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 12:30:56] 2025-05-25 16:30:36,610 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 12:30:56] 2025-05-25 16:30:36,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 12:30:56] 2025-05-25 16:30:36,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 12:30:56] 2025-05-25 16:30:36,628 | INFO     | fitting pss+swap vs Time
[2025-05-25 12:30:56] 2025-05-25 16:30:36,633 | INFO     | sum of square deviations: 26413831394.088673
[2025-05-25 12:30:56] 2025-05-25 16:30:36,640 | INFO     | sum of deviations: 258619389484.22485
[2025-05-25 12:30:56] 2025-05-25 16:30:36,640 | INFO     | mean x: 1748177169.8159091
[2025-05-25 12:30:56] 2025-05-25 16:30:36,641 | INFO     | mean y: 2427152.225
[2025-05-25 12:30:56] 2025-05-25 16:30:36,641 | INFO     | -- intersect: -17114079181.999264
[2025-05-25 12:30:56] 2025-05-25 16:30:36,641 | INFO     | intersect: -17114079181.999264
[2025-05-25 12:30:56] 2025-05-25 16:30:36,641 | INFO     | chi2: 8.424544295099523
[2025-05-25 12:30:56] 2025-05-25 16:30:36,642 | INFO     | sum of square deviations: 25523560610.220642
[2025-05-25 12:30:56] 2025-05-25 16:30:36,705 | INFO     | sum of deviations: 314268393742.2137
[2025-05-25 12:30:56] 2025-05-25 16:30:36,705 | INFO     | mean x: 1748177017.3172414
[2025-05-25 12:30:56] 2025-05-25 16:30:36,705 | INFO     | mean y: 2436615.0781609197
[2025-05-25 12:30:56] 2025-05-25 16:30:36,705 | INFO     | -- intersect: -21522647271.11534
[2025-05-25 12:30:56] 2025-05-25 16:30:36,706 | INFO     | intersect: -21522647271.11534
[2025-05-25 12:30:56] 2025-05-25 16:30:36,706 | INFO     | chi2: 6.880567901995403
[2025-05-25 12:30:56] 2025-05-25 16:30:36,706 | INFO     | current chi2=6.880567901995403 (change=18.327120601671428 %)
[2025-05-25 12:30:56] 2025-05-25 16:30:36,706 | INFO     | right removable region: 434
[2025-05-25 12:30:56] 2025-05-25 16:30:36,717 | INFO     | sum of square deviations: 25523502538.583874
[2025-05-25 12:30:56] 2025-05-25 16:30:36,739 | INFO     | sum of deviations: 101721017946.60005
[2025-05-25 12:30:56] 2025-05-25 16:30:36,739 | INFO     | mean x: 1748177322.3195403
[2025-05-25 12:30:56] 2025-05-25 16:30:36,739 | INFO     | mean y: 2454021.6
[2025-05-25 12:30:56] 2025-05-25 16:30:36,739 | INFO     | -- intersect: -6964707969.928596
[2025-05-25 12:30:56] 2025-05-25 16:30:36,740 | INFO     | intersect: -6964707969.928596
[2025-05-25 12:30:56] 2025-05-25 16:30:36,740 | INFO     | chi2: 3.516227903912623
[2025-05-25 12:30:56] 2025-05-25 16:30:36,740 | INFO     | current chi2=3.516227903912623 (change=58.26209963715212 %)
[2025-05-25 12:30:56] 2025-05-25 16:30:36,757 | INFO     | sum of square deviations: 24653406620.56736
[2025-05-25 12:30:56] 2025-05-25 16:30:36,806 | INFO     | sum of deviations: 12868752062.26508
[2025-05-25 12:30:56] 2025-05-25 16:30:36,806 | INFO     | mean x: 1748177474.8232558
[2025-05-25 12:30:56] 2025-05-25 16:30:36,807 | INFO     | mean y: 2469558.253488372
[2025-05-25 12:30:56] 2025-05-25 16:30:36,807 | INFO     | -- intersect: -910055953.152667
[2025-05-25 12:30:56] 2025-05-25 16:30:36,807 | INFO     | intersect: -910055953.152667
[2025-05-25 12:30:56] 2025-05-25 16:30:36,807 | INFO     | chi2: 1.8348707302404974
[2025-05-25 12:30:56] 2025-05-25 16:30:36,808 | INFO     | current chi2=1.8348707302404974 (change=47.81707044077615 %)
[2025-05-25 12:30:56] 2025-05-25 16:30:36,808 | INFO     | sum of square deviations: 23803311077.53901
[2025-05-25 12:30:56] 2025-05-25 16:30:36,840 | INFO     | sum of deviations: -17174091892.103497
[2025-05-25 12:30:56] 2025-05-25 16:30:36,872 | INFO     | mean x: 1748177627.3270588
[2025-05-25 12:30:56] 2025-05-25 16:30:36,872 | INFO     | mean y: 2474939.4611764704
[2025-05-25 12:30:56] 2025-05-25 16:30:36,873 | INFO     | -- intersect: 1263785314.2083538
[2025-05-25 12:30:56] 2025-05-25 16:30:36,873 | INFO     | intersect: 1263785314.2083538
[2025-05-25 12:30:56] 2025-05-25 16:30:36,873 | INFO     | chi2: 1.6624074921311829
[2025-05-25 12:30:56] 2025-05-25 16:30:36,874 | INFO     | current chi2=1.6624074921311829 (change=9.399203729556996 %)
[2025-05-25 12:30:56] 2025-05-25 16:30:36,874 | INFO     | left removable region: 30
[2025-05-25 12:30:56] 2025-05-25 16:30:36,874 | INFO     | sum of square deviations: 20446167412.5421
[2025-05-25 12:30:56] 2025-05-25 16:30:36,891 | INFO     | sum of deviations: 20851479607.65593
[2025-05-25 12:30:56] 2025-05-25 16:30:36,892 | INFO     | mean x: 1748177901.839109
[2025-05-25 12:30:56] 2025-05-25 16:30:36,892 | INFO     | mean y: 2488845.9331683167
[2025-05-25 12:30:56] 2025-05-25 16:30:36,892 | INFO     | -- intersect: -1780343854.947117
[2025-05-25 12:30:56] 2025-05-25 16:30:36,892 | INFO     | intersect: -1780343854.947117
[2025-05-25 12:30:56] 2025-05-25 16:30:36,893 | INFO     | chi2: 0.0017428390878460995
[2025-05-25 12:30:56] 2025-05-25 16:30:36,905 | INFO     | -- intersect: -1780343854.947117
[2025-05-25 12:30:56] 2025-05-25 16:30:36,906 | INFO     | current memory leak: 1.02 B/s (using 404 data points, chi2=0.00)
[2025-05-25 12:30:56] 2025-05-25 16:30:36,907 | INFO     | ..............................
[2025-05-25 12:30:56] 2025-05-25 16:30:36,907 | INFO     | . Timing measurements:
[2025-05-25 12:30:56] 2025-05-25 16:30:36,907 | INFO     | . get job = 0 s
[2025-05-25 12:30:56] 2025-05-25 16:30:36,907 | INFO     | . initial setup = 9 s
[2025-05-25 12:30:56] 2025-05-25 16:30:36,907 | INFO     | . payload setup = 181 s
[2025-05-25 12:30:56] 2025-05-25 16:30:36,907 | INFO     | . stage-in = 0 s
[2025-05-25 12:30:56] 2025-05-25 16:30:36,907 | INFO     | . payload execution = 26901 s
[2025-05-25 12:30:56] 2025-05-25 16:30:36,908 | INFO     | . stage-out = 4 s
[2025-05-25 12:30:56] 2025-05-25 16:30:36,908 | INFO     | . log creation = 0 s
[2025-05-25 12:30:56] 2025-05-25 16:30:36,908 | INFO     | ..............................
[2025-05-25 12:30:56] 2025-05-25 16:30:37,197 | INFO     | 
[2025-05-25 12:30:56] 2025-05-25 16:30:37,197 | INFO     | job summary report
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | --------------------------------------------------
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | PanDA job id: 6665713950
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | task id: 44871837
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | errors: (none)
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | pilot state: finished 
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | transexitcode: 0
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | exeerrorcode: 0
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | exeerrordiag: 
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | exitcode: 0
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | exitmsg: OK
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | cpuconsumptiontime: 59456 s
[2025-05-25 12:30:56] 2025-05-25 16:30:37,198 | INFO     | nevents: 400
[2025-05-25 12:30:56] 2025-05-25 16:30:37,199 | INFO     | neventsw: 0
[2025-05-25 12:30:56] 2025-05-25 16:30:37,199 | INFO     | pid: 272699
[2025-05-25 12:30:56] 2025-05-25 16:30:37,199 | INFO     | pgrp: 272699
[2025-05-25 12:30:56] 2025-05-25 16:30:37,199 | INFO     | corecount: 8
[2025-05-25 12:30:56] 2025-05-25 16:30:37,199 | INFO     | event service: False
[2025-05-25 12:30:56] 2025-05-25 16:30:37,199 | INFO     | sizes: {0: 2392913, 1: 2393598, 2: 2393797, 3: 2393797, 14: 2393825, 24: 2393853, 35: 2394009, 47: 2394037, 58: 2394093, 59: 2394327, 69: 2394355, 27087: 2430200, 
[2025-05-25 12:30:56] 2025-05-25 16:30:37,199 | INFO     | --------------------------------------------------
[2025-05-25 12:30:56] 2025-05-25 16:30:37,199 | INFO     | 
[2025-05-25 12:30:56] 2025-05-25 16:30:37,199 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-25 12:30:56] 2025-05-25 16:30:37,375 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,375 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | job 6665713950 has completed (purged errors)
[2025-05-25 12:30:56] 2025-05-25 16:30:37,376 | INFO     | overall cleanup function is called
[2025-05-25 12:30:56] 2025-05-25 16:30:38,388 | INFO     | --- collectZombieJob: --- 10, [272699]
[2025-05-25 12:30:56] 2025-05-25 16:30:38,388 | INFO     | zombie collector waiting for pid 272699
[2025-05-25 12:30:56] 2025-05-25 16:30:38,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 12:30:56] 2025-05-25 16:30:38,389 | INFO     | collected zombie processes
[2025-05-25 12:30:56] 2025-05-25 16:30:38,389 | INFO     | will attempt to kill all subprocesses of pid=272699
[2025-05-25 12:30:56] 2025-05-25 16:30:39,545 | INFO     | process IDs to be killed: [272699] (in reverse order)
[2025-05-25 12:30:56] 2025-05-25 16:30:40,083 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 12:30:56] 2025-05-25 16:30:40,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 12:30:56] 2025-05-25 16:30:40,095 | INFO     | did not find any defunct processes belonging to 272699
[2025-05-25 12:30:56] 2025-05-25 16:30:40,108 | INFO     | did not find any defunct processes belonging to 272699
[2025-05-25 12:30:56] 2025-05-25 16:30:40,108 | INFO     | ready for new job
[2025-05-25 12:30:56] 2025-05-25 16:30:40,108 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 12:30:56] 2025-05-25 16:30:40,110 | INFO     | **************************************
[2025-05-25 12:30:56] 2025-05-25 16:30:40,110 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 12:30:56] 2025-05-25 16:30:40,111 | INFO     | **************************************
[2025-05-25 12:30:56] 2025-05-25 16:30:40,111 | INFO     | 
[2025-05-25 12:30:56] 2025-05-25 16:30:40,116 | INFO     | architecture information:
[2025-05-25 12:30:56] 2025-05-25 16:30:40,116 | INFO     | executing command: cat /etc/os-release
[2025-05-25 12:30:56] 2025-05-25 16:30:40,138 | INFO     | cat /etc/os-release:
[2025-05-25 12:30:56] NAME="CentOS Linux"
[2025-05-25 12:30:56] VERSION="7 (Core)"
[2025-05-25 12:30:56] ID="centos"
[2025-05-25 12:30:56] ID_LIKE="rhel fedora"
[2025-05-25 12:30:56] VERSION_ID="7"
[2025-05-25 12:30:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 12:30:56] ANSI_COLOR="0;31"
[2025-05-25 12:30:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 12:30:56] HOME_URL="https://www.centos.org/"
[2025-05-25 12:30:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 12:30:56] 
[2025-05-25 12:30:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 12:30:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 12:30:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 12:30:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 12:30:56] 
[2025-05-25 12:30:56] 2025-05-25 16:30:40,139 | INFO     | **************************************
[2025-05-25 12:30:56] 2025-05-25 16:30:40,642 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-25 12:30:56] 2025-05-25 16:30:40,781 | INFO     | sufficient remaining disk space (103655931904 B)
[2025-05-25 12:30:56] 2025-05-25 16:30:40,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 12:30:56] 2025-05-25 16:30:40,782 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 12:30:56] 2025-05-25 16:30:40,782 | INFO     | update_server=False
[2025-05-25 12:30:56] 2025-05-25 16:30:40,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 12:30:56] 2025-05-25 16:30:40,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 12:30:56] 2025-05-25 16:30:40,782 | INFO     | aborting loop
[2025-05-25 12:30:56] 2025-05-25 16:30:40,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 12:30:56] 2025-05-25 16:30:40,786 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 12:30:56] 2025-05-25 16:30:40,787 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 12:30:56] 2025-05-25 16:30:40,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 12:30:56] 2025-05-25 16:30:40,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 12:30:56] 2025-05-25 16:30:40,827 | INFO     | all data control threads have been joined
[2025-05-25 12:30:56] 2025-05-25 16:30:40,904 | INFO     | all job control threads have been joined
[2025-05-25 12:30:56] 2025-05-25 16:30:41,788 | INFO     | [job] retrieve thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:41,792 | INFO     | [job] job monitor thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:41,834 | INFO     | [data] control thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:41,851 | INFO     | [job] validate thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:41,910 | INFO     | [job] control thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:42,016 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:42,215 | INFO     | all payload control threads have been joined
[2025-05-25 12:30:56] 2025-05-25 16:30:42,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 12:30:56] 2025-05-25 16:30:42,275 | INFO     | [payload] validate_post thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:42,385 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:42,428 | INFO     | [data] copytool_in thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:42,465 | INFO     | [payload] failed_post thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:42,546 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:42,608 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:42,790 | INFO     | [data] copytool_out thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:43,221 | INFO     | [payload] control thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:43,266 | INFO     | [job] queue monitor thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:43,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 12:30:56] 2025-05-25 16:30:47,429 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 12:30:56] 2025-05-25 16:30:48,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140648860268352)>', '<ExcThread(monitor, started 140648418105088)>']
[2025-05-25 12:30:56] 2025-05-25 16:30:48,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 12:30:56] 2025-05-25 16:30:48,836 | INFO     | [monitor] control thread has ended
[2025-05-25 12:30:56] 2025-05-25 16:30:53,813 | INFO     | all workflow threads have been joined
[2025-05-25 12:30:56] 2025-05-25 16:30:53,813 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 12:30:56] 2025-05-25 16:30:53,814 | INFO     | traces error code: 0
[2025-05-25 12:30:56] 2025-05-25 16:30:53,814 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 12:30:56] 2025-05-25 16:30:55,019 [wrapper] ==== pilot stdout END ====
[2025-05-25 12:30:56] 2025-05-25 16:30:55,064 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 12:30:56] 2025-05-25 16:30:55,103 [wrapper] pilotpid: 255961
[2025-05-25 12:30:56] 2025-05-25 16:30:55,154 [wrapper] Pilot exit status: 0
[2025-05-25 12:30:56] 2025-05-25 16:30:55,233 [wrapper] pandaids: 6665713950
[2025-05-25 12:30:56] 2025-05-25 16:30:55,335 [wrapper] cleanup supervisor_pilot 263336 255962
[2025-05-25 12:30:56] 2025-05-25 16:30:55,338 [wrapper] Test setup, not cleaning
[2025-05-25 12:30:56] 2025-05-25 16:30:55,342 [wrapper] apfmon messages muted
[2025-05-25 12:30:56] 2025-05-25 16:30:55,346 [wrapper] ==== wrapper stdout END ====
[2025-05-25 12:30:56] 2025-05-25 16:30:55,349 [wrapper] ==== wrapper stderr END ====
[2025-05-25 12:30:56]  *** Error codes and diagnostics ***
[2025-05-25 12:30:56]     "exeErrorCode": 0,
[2025-05-25 12:30:56]     "exeErrorDiag": "",
[2025-05-25 12:30:56]     "pilotErrorCode": 0,
[2025-05-25 12:30:56]     "pilotErrorDiag": "",
[2025-05-25 12:30:56]  *** Listing of results directory ***
[2025-05-25 12:30:56] total 417768
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas    495897 May 24 22:29 pilot3.tar.gz
[2025-05-25 12:30:56] -rwx------ 1 boincer umatlas     37140 May 24 22:38 runpilot2-wrapper.sh
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas      5111 May 24 22:38 queuedata.json
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas       100 May 25 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 12:30:56] -rwxr-xr-x 1 boincer umatlas      7986 May 25 04:52 run_atlas
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas       105 May 25 04:52 job.xml
[2025-05-25 12:30:56] -rw-r--r-- 2 boincer umatlas 223932945 May 25 04:53 EVNT.44871834._001107.pool.root.1
[2025-05-25 12:30:56] -rw-r--r-- 2 boincer umatlas     15093 May 25 04:53 start_atlas.sh
[2025-05-25 12:30:56] drwxrwx--x 2 boincer umatlas      4096 May 25 04:53 shared
[2025-05-25 12:30:56] -rw-r--r-- 2 boincer umatlas    508872 May 25 04:53 input.tar.gz
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas         0 May 25 04:53 boinc_lockfile
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas      2559 May 25 04:53 pandaJob.out
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas    990811 May 25 04:55 agis_schedconf.cvmfs.json
[2025-05-25 12:30:56] drwx------ 4 boincer umatlas      4096 May 25 04:56 pilot3
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas      6385 May 25 12:27 init_data.xml
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas 194708221 May 25 12:27 HITS.44871837._027780.pool.root.1
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas       531 May 25 12:27 boinc_task_state.xml
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas      1059 May 25 12:29 memory_monitor_summary.json
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas   1596740 May 25 12:29 agis_ddmendpoints.agis.ALL.json
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas    507593 May 25 12:29 log.44871837._027780.job.log.tgz.1
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas        95 May 25 12:30 pilot_heartbeat.json
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas      7756 May 25 12:30 heartbeat.json
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas      8192 May 25 12:30 boinc_mmap_file
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas        28 May 25 12:30 wrapper_checkpoint.txt
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas      4477 May 25 12:30 pilotlog.txt
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas   2152148 May 25 12:30 log.44871837._027780.job.log.1
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas       357 May 25 12:30 output.list
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas       620 May 25 12:30 runtime_log
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas   2682880 May 25 12:30 result.tar.gz
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas      8670 May 25 12:30 runtime_log.err
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas       664 May 25 12:30 gjvLDmdQGd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfiNKDm5LOlAn.diag
[2025-05-25 12:30:56] -rw-r--r-- 1 boincer umatlas     20965 May 25 12:30 stderr.txt
[2025-05-25 12:30:56] HITS file was successfully produced:
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas 194708221 May 25 12:27 shared/HITS.pool.root.1
[2025-05-25 12:30:56]  *** Contents of shared directory: ***
[2025-05-25 12:30:56] total 411976
[2025-05-25 12:30:56] -rw-r--r-- 2 boincer umatlas 223932945 May 25 04:53 ATLAS.root_0
[2025-05-25 12:30:56] -rw-r--r-- 2 boincer umatlas     15093 May 25 04:53 start_atlas.sh
[2025-05-25 12:30:56] -rw-r--r-- 2 boincer umatlas    508872 May 25 04:53 input.tar.gz
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas 194708221 May 25 12:27 HITS.pool.root.1
[2025-05-25 12:30:56] -rw------- 1 boincer umatlas   2682880 May 25 12:30 result.tar.gz
12:30:57 (239092): run_atlas exited; CPU time 60486.852605
12:30:57 (239092): called boinc_finish(0)

</stderr_txt>
]]>

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