Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:32:58 (1259506): wrapper (7.7.26015): starting
09:32:58 (1259506): wrapper: running run_atlas (--nthreads 4)
[2025-05-26 09:32:58] Arguments: --nthreads 4
[2025-05-26 09:32:58] Threads: 4
[2025-05-26 09:32:58] Checking for CVMFS
[2025-05-26 09:32:58] No cvmfs_config command found, will try listing directly
[2025-05-26 09:32:58] CVMFS is ok
[2025-05-26 09:32:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-26 09:32:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-26 09:32:58] Further information can be found at the LHC@home message board.
[2025-05-26 09:32:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-26 09:32:58] Checking for apptainer binary...
[2025-05-26 09:32:58] which: no apptainer in ((null))
[2025-05-26 09:32:58] apptainer is not installed, using version from CVMFS
[2025-05-26 09:32:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-26 09:32:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-05-26 09:32:58] apptainer works
[2025-05-26 09:32:58] Set ATHENA_PROC_NUMBER=4
[2025-05-26 09:32:58] Set ATHENA_CORE_NUMBER=4
[2025-05-26 09:32:58] Starting ATLAS job with PandaID=6665683028
[2025-05-26 09:32:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-26 13:44:07]  *** The last 200 lines of the pilot log: ***
[2025-05-26 13:44:07] 2025-05-26 11:43:45,954 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-26 13:44:07] 2025-05-26 11:43:45,954 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-26 13:44:07] 2025-05-26 11:43:45,955 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-26 13:44:07] 2025-05-26 11:43:45,960 | INFO     | fitting pss+swap vs Time
[2025-05-26 13:44:07] 2025-05-26 11:43:45,960 | INFO     | sum of square deviations: 4616114457.5
[2025-05-26 13:44:07] 2025-05-26 11:43:45,962 | INFO     | sum of deviations: -51290764352.50001
[2025-05-26 13:44:07] 2025-05-26 11:43:45,963 | INFO     | mean x: 1748252328.5
[2025-05-26 13:44:07] 2025-05-26 11:43:45,963 | INFO     | mean y: 2357273.735772358
[2025-05-26 13:44:07] 2025-05-26 11:43:45,963 | INFO     | -- intersect: 19427611789.276115
[2025-05-26 13:44:07] 2025-05-26 11:43:45,963 | INFO     | intersect: 19427611789.276115
[2025-05-26 13:44:07] 2025-05-26 11:43:45,963 | INFO     | chi2: 2.547893180172168
[2025-05-26 13:44:07] 2025-05-26 11:43:45,964 | INFO     | sum of square deviations: 4340323240.0
[2025-05-26 13:44:07] 2025-05-26 11:43:45,966 | INFO     | sum of deviations: -36141317271.00001
[2025-05-26 13:44:07] 2025-05-26 11:43:45,966 | INFO     | mean x: 1748252176.0
[2025-05-26 13:44:07] 2025-05-26 11:43:45,966 | INFO     | mean y: 2365521.7510373443
[2025-05-26 13:44:07] 2025-05-26 11:43:45,966 | INFO     | -- intersect: 14559838103.570116
[2025-05-26 13:44:07] 2025-05-26 11:43:45,966 | INFO     | intersect: 14559838103.570116
[2025-05-26 13:44:07] 2025-05-26 11:43:45,967 | INFO     | chi2: 1.8877854266810654
[2025-05-26 13:44:07] 2025-05-26 11:43:45,967 | INFO     | current chi2=1.8877854266810654 (change=25.907983844381473 %)
[2025-05-26 13:44:07] 2025-05-26 11:43:45,967 | INFO     | sum of square deviations: 4075741535.0
[2025-05-26 13:44:07] 2025-05-26 11:43:45,969 | INFO     | sum of deviations: -35395685418.00001
[2025-05-26 13:44:07] 2025-05-26 11:43:45,969 | INFO     | mean x: 1748252023.5
[2025-05-26 13:44:07] 2025-05-26 11:43:45,969 | INFO     | mean y: 2365951.6016949154
[2025-05-26 13:44:07] 2025-05-26 11:43:45,970 | INFO     | -- intersect: 15185021211.704676
[2025-05-26 13:44:07] 2025-05-26 11:43:45,970 | INFO     | intersect: 15185021211.704676
[2025-05-26 13:44:07] 2025-05-26 11:43:45,970 | INFO     | chi2: 1.883849982253397
[2025-05-26 13:44:07] 2025-05-26 11:43:45,970 | INFO     | current chi2=1.883849982253397 (change=0.20846884248849248 %)
[2025-05-26 13:44:07] 2025-05-26 11:43:45,970 | INFO     | right removable region: 235
[2025-05-26 13:44:07] 2025-05-26 11:43:45,971 | INFO     | sum of square deviations: 4340323240.0
[2025-05-26 13:44:07] 2025-05-26 11:43:45,973 | INFO     | sum of deviations: -83163271764.0
[2025-05-26 13:44:07] 2025-05-26 11:43:45,973 | INFO     | mean x: 1748252481.0
[2025-05-26 13:44:07] 2025-05-26 11:43:45,973 | INFO     | mean y: 2374693.0871369294
[2025-05-26 13:44:07] 2025-05-26 11:43:45,973 | INFO     | -- intersect: 33499971104.706066
[2025-05-26 13:44:07] 2025-05-26 11:43:45,973 | INFO     | intersect: 33499971104.706066
[2025-05-26 13:44:07] 2025-05-26 11:43:45,974 | INFO     | chi2: 1.0987920853814608
[2025-05-26 13:44:07] 2025-05-26 11:43:45,974 | INFO     | current chi2=1.0987920853814608 (change=56.87448383109953 %)
[2025-05-26 13:44:07] 2025-05-26 11:43:45,974 | INFO     | sum of square deviations: 4075741535.0
[2025-05-26 13:44:07] 2025-05-26 11:43:45,976 | INFO     | sum of deviations: -73944324043.49998
[2025-05-26 13:44:07] 2025-05-26 11:43:45,976 | INFO     | mean x: 1748252633.5
[2025-05-26 13:44:07] 2025-05-26 11:43:45,976 | INFO     | mean y: 2369363.5127118644
[2025-05-26 13:44:07] 2025-05-26 11:43:45,976 | INFO     | -- intersect: 31720121367.977394
[2025-05-26 13:44:07] 2025-05-26 11:43:45,976 | INFO     | intersect: 31720121367.977394
[2025-05-26 13:44:07] 2025-05-26 11:43:45,977 | INFO     | chi2: 1.082013859689609
[2025-05-26 13:44:07] 2025-05-26 11:43:45,977 | INFO     | current chi2=1.082013859689609 (change=1.526970016900608 %)
[2025-05-26 13:44:07] 2025-05-26 11:43:45,977 | INFO     | left removable region: 20
[2025-05-26 13:44:07] 2025-05-26 11:43:45,977 | INFO     | sum of square deviations: 3081657780.0
[2025-05-26 13:44:07] 2025-05-26 11:43:45,979 | INFO     | sum of deviations: -35180325406.00002
[2025-05-26 13:44:07] 2025-05-26 11:43:45,979 | INFO     | mean x: 1748252603.0
[2025-05-26 13:44:07] 2025-05-26 11:43:45,979 | INFO     | mean y: 2363929.981395349
[2025-05-26 13:44:07] 2025-05-26 11:43:45,979 | INFO     | -- intersect: 19960483830.44178
[2025-05-26 13:44:07] 2025-05-26 11:43:45,979 | INFO     | intersect: 19960483830.44178
[2025-05-26 13:44:07] 2025-05-26 11:43:45,980 | INFO     | chi2: 0.3072520937520618
[2025-05-26 13:44:07] 2025-05-26 11:43:45,980 | INFO     | -- intersect: 19960483830.44178
[2025-05-26 13:44:07] 2025-05-26 11:43:45,980 | INFO     | current memory leak: -11.42 B/s (using 215 data points, chi2=0.31)
[2025-05-26 13:44:07] 2025-05-26 11:43:45,981 | INFO     | ..............................
[2025-05-26 13:44:07] 2025-05-26 11:43:45,981 | INFO     | . Timing measurements:
[2025-05-26 13:44:07] 2025-05-26 11:43:45,981 | INFO     | . get job = 0 s
[2025-05-26 13:44:07] 2025-05-26 11:43:45,981 | INFO     | . initial setup = 3 s
[2025-05-26 13:44:07] 2025-05-26 11:43:45,981 | INFO     | . payload setup = 14 s
[2025-05-26 13:44:07] 2025-05-26 11:43:45,981 | INFO     | . stage-in = 0 s
[2025-05-26 13:44:07] 2025-05-26 11:43:45,981 | INFO     | . payload execution = 14969 s
[2025-05-26 13:44:07] 2025-05-26 11:43:45,981 | INFO     | . stage-out = 1 s
[2025-05-26 13:44:07] 2025-05-26 11:43:45,982 | INFO     | . log creation = 0 s
[2025-05-26 13:44:07] 2025-05-26 11:43:45,982 | INFO     | ..............................
[2025-05-26 13:44:07] 2025-05-26 11:43:46,093 | INFO     | 
[2025-05-26 13:44:07] 2025-05-26 11:43:46,093 | INFO     | job summary report
[2025-05-26 13:44:07] 2025-05-26 11:43:46,093 | INFO     | --------------------------------------------------
[2025-05-26 13:44:07] 2025-05-26 11:43:46,094 | INFO     | PanDA job id: 6665683028
[2025-05-26 13:44:07] 2025-05-26 11:43:46,094 | INFO     | task id: 44871837
[2025-05-26 13:44:07] 2025-05-26 11:43:46,094 | INFO     | errors: (none)
[2025-05-26 13:44:07] 2025-05-26 11:43:46,094 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-26 13:44:07] 2025-05-26 11:43:46,094 | INFO     | pilot state: finished 
[2025-05-26 13:44:07] 2025-05-26 11:43:46,094 | INFO     | transexitcode: 0
[2025-05-26 13:44:07] 2025-05-26 11:43:46,094 | INFO     | exeerrorcode: 0
[2025-05-26 13:44:07] 2025-05-26 11:43:46,094 | INFO     | exeerrordiag: 
[2025-05-26 13:44:07] 2025-05-26 11:43:46,094 | INFO     | exitcode: 0
[2025-05-26 13:44:07] 2025-05-26 11:43:46,094 | INFO     | exitmsg: OK
[2025-05-26 13:44:07] 2025-05-26 11:43:46,094 | INFO     | cpuconsumptiontime: 57039 s
[2025-05-26 13:44:07] 2025-05-26 11:43:46,095 | INFO     | nevents: 400
[2025-05-26 13:44:07] 2025-05-26 11:43:46,095 | INFO     | neventsw: 0
[2025-05-26 13:44:07] 2025-05-26 11:43:46,095 | INFO     | pid: 1270195
[2025-05-26 13:44:07] 2025-05-26 11:43:46,095 | INFO     | pgrp: 1270195
[2025-05-26 13:44:07] 2025-05-26 11:43:46,095 | INFO     | corecount: 4
[2025-05-26 13:44:07] 2025-05-26 11:43:46,095 | INFO     | event service: False
[2025-05-26 13:44:07] 2025-05-26 11:43:46,095 | INFO     | sizes: {0: 2392906, 1: 2393602, 2: 2393801, 11: 2394007, 12: 2394035, 14987: 2424736, 14988: 2424863, 14990: 2433882, 14992: 2433938, 14998: 2434108}
[2025-05-26 13:44:07] 2025-05-26 11:43:46,095 | INFO     | --------------------------------------------------
[2025-05-26 13:44:07] 2025-05-26 11:43:46,095 | INFO     | 
[2025-05-26 13:44:07] 2025-05-26 11:43:46,095 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2025-05-26 13:44:07] 2025-05-26 11:43:46,117 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,117 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,117 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,117 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,118 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,118 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,118 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,118 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,118 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,118 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,118 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,118 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,119 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,119 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,119 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-26 13:44:07] 2025-05-26 11:43:46,119 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,119 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-26 13:44:07] 2025-05-26 11:43:46,119 | INFO     | job 6665683028 has completed (purged errors)
[2025-05-26 13:44:07] 2025-05-26 11:43:46,119 | INFO     | overall cleanup function is called
[2025-05-26 13:44:07] 2025-05-26 11:43:47,127 | INFO     | --- collectZombieJob: --- 10, [1270195]
[2025-05-26 13:44:07] 2025-05-26 11:43:47,127 | INFO     | zombie collector waiting for pid 1270195
[2025-05-26 13:44:07] 2025-05-26 11:43:47,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-26 13:44:07] 2025-05-26 11:43:47,127 | INFO     | collected zombie processes
[2025-05-26 13:44:07] 2025-05-26 11:43:47,127 | INFO     | will attempt to kill all subprocesses of pid=1270195
[2025-05-26 13:44:07] 2025-05-26 11:43:47,494 | INFO     | process IDs to be killed: [1270195] (in reverse order)
[2025-05-26 13:44:07] 2025-05-26 11:43:47,617 | WARNING  | found no corresponding commands to process id(s)
[2025-05-26 13:44:07] 2025-05-26 11:43:47,618 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-26 13:44:07] 2025-05-26 11:43:47,628 | INFO     | did not find any defunct processes belonging to 1270195
[2025-05-26 13:44:07] 2025-05-26 11:43:47,639 | INFO     | did not find any defunct processes belonging to 1270195
[2025-05-26 13:44:07] 2025-05-26 11:43:47,639 | INFO     | ready for new job
[2025-05-26 13:44:07] 2025-05-26 11:43:47,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-26 13:44:07] 2025-05-26 11:43:47,641 | INFO     | **************************************
[2025-05-26 13:44:07] 2025-05-26 11:43:47,642 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-26 13:44:07] 2025-05-26 11:43:47,642 | INFO     | **************************************
[2025-05-26 13:44:07] 2025-05-26 11:43:47,642 | INFO     | 
[2025-05-26 13:44:07] 2025-05-26 11:43:47,646 | INFO     | architecture information:
[2025-05-26 13:44:07] 2025-05-26 11:43:47,646 | INFO     | executing command: cat /etc/os-release
[2025-05-26 13:44:07] 2025-05-26 11:43:47,662 | INFO     | cat /etc/os-release:
[2025-05-26 13:44:07] NAME="CentOS Linux"
[2025-05-26 13:44:07] VERSION="7 (Core)"
[2025-05-26 13:44:07] ID="centos"
[2025-05-26 13:44:07] ID_LIKE="rhel fedora"
[2025-05-26 13:44:07] VERSION_ID="7"
[2025-05-26 13:44:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-26 13:44:07] ANSI_COLOR="0;31"
[2025-05-26 13:44:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-26 13:44:07] HOME_URL="https://www.centos.org/"
[2025-05-26 13:44:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-26 13:44:07] 
[2025-05-26 13:44:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-26 13:44:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-26 13:44:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-26 13:44:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-26 13:44:07] 
[2025-05-26 13:44:07] 2025-05-26 11:43:47,662 | INFO     | **************************************
[2025-05-26 13:44:07] 2025-05-26 11:43:48,165 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2025-05-26 13:44:07] 2025-05-26 11:43:48,180 | INFO     | sufficient remaining disk space (668567863296 B)
[2025-05-26 13:44:07] 2025-05-26 11:43:48,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-26 13:44:07] 2025-05-26 11:43:48,180 | INFO     | current server update state: UPDATING_FINAL
[2025-05-26 13:44:07] 2025-05-26 11:43:48,181 | INFO     | update_server=False
[2025-05-26 13:44:07] 2025-05-26 11:43:48,181 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-26 13:44:07] 2025-05-26 11:43:48,181 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-26 13:44:07] 2025-05-26 11:43:48,181 | INFO     | found 0 job(s) in 20 queues
[2025-05-26 13:44:07] 2025-05-26 11:43:48,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-26 13:44:07] 2025-05-26 11:43:48,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-26 13:44:07] 2025-05-26 11:43:48,184 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-26 13:44:07] 2025-05-26 11:43:48,184 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-26 13:44:07] 2025-05-26 11:43:48,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-26 13:44:07] 2025-05-26 11:43:48,184 | INFO     | will abort loop
[2025-05-26 13:44:07] 2025-05-26 11:43:48,295 | INFO     | all data control threads have been joined
[2025-05-26 13:44:07] 2025-05-26 11:43:48,316 | INFO     | all payload control threads have been joined
[2025-05-26 13:44:07] 2025-05-26 11:43:48,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-26 13:44:07] 2025-05-26 11:43:49,186 | INFO     | [job] retrieve thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:49,189 | INFO     | [job] job monitor thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:49,190 | INFO     | all job control threads have been joined
[2025-05-26 13:44:07] 2025-05-26 11:43:49,254 | INFO     | [payload] validate_post thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:49,300 | INFO     | [data] control thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:49,321 | INFO     | [payload] control thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:49,326 | INFO     | [data] copytool_in thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:49,394 | INFO     | [job] validate thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:49,584 | INFO     | [job] create_data_payload thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:49,814 | INFO     | [payload] execute_payloads thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:49,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-26 13:44:07] 2025-05-26 11:43:50,195 | INFO     | [job] control thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:50,228 | INFO     | [payload] validate_pre thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:50,596 | INFO     | [payload] failed_post thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:50,690 | INFO     | [data] copytool_out thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:51,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-26 13:44:07] 2025-05-26 11:43:52,108 | INFO     | [job] queue monitor thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:53,888 | INFO     | [data] queue_monitor thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:43:58,900 | INFO     | job.realtimelogging is not enabled
[2025-05-26 13:44:07] 2025-05-26 11:43:59,905 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-26 13:44:07] 2025-05-26 11:44:01,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22877368420160)>', '<ExcThread(monitor, started 22877126485760)>']
[2025-05-26 13:44:07] 2025-05-26 11:44:02,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-26 13:44:07] 2025-05-26 11:44:02,254 | INFO     | [monitor] control thread has ended
[2025-05-26 13:44:07] 2025-05-26 11:44:06,838 | INFO     | all workflow threads have been joined
[2025-05-26 13:44:07] 2025-05-26 11:44:06,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-26 13:44:07] 2025-05-26 11:44:06,839 | INFO     | traces error code: 0
[2025-05-26 13:44:07] 2025-05-26 11:44:06,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-26 13:44:07] 2025-05-26 11:44:06,978 [wrapper] ==== pilot stdout END ====
[2025-05-26 13:44:07] 2025-05-26 11:44:06,980 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-26 13:44:07] 2025-05-26 11:44:06,983 [wrapper] pilotpid: 1263223
[2025-05-26 13:44:07] 2025-05-26 11:44:06,986 [wrapper] Pilot exit status: 0
[2025-05-26 13:44:07] 2025-05-26 11:44:06,997 [wrapper] pandaids: 6665683028
[2025-05-26 13:44:07] 2025-05-26 11:44:07,061 [wrapper] cleanup supervisor_pilot 1891106 1263224
[2025-05-26 13:44:07] 2025-05-26 11:44:07,064 [wrapper] Test setup, not cleaning
[2025-05-26 13:44:07] 2025-05-26 11:44:07,067 [wrapper] apfmon messages muted
[2025-05-26 13:44:07] 2025-05-26 11:44:07,070 [wrapper] ==== wrapper stdout END ====
[2025-05-26 13:44:07] 2025-05-26 11:44:07,073 [wrapper] ==== wrapper stderr END ====
[2025-05-26 13:44:07]  *** Error codes and diagnostics ***
[2025-05-26 13:44:07]     "exeErrorCode": 0,
[2025-05-26 13:44:07]     "exeErrorDiag": "",
[2025-05-26 13:44:07]     "pilotErrorCode": 0,
[2025-05-26 13:44:07]     "pilotErrorDiag": "",
[2025-05-26 13:44:07]  *** Listing of results directory ***
[2025-05-26 13:44:07] total 421684
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc    495897 May 25 00:42 pilot3.tar.gz
[2025-05-26 13:44:07] -rwx------ 1 boinc boinc     37140 May 25 01:14 runpilot2-wrapper.sh
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc      5111 May 25 01:14 queuedata.json
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc       100 May 26 09:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-26 13:44:07] -rwxr-xr-x 1 boinc boinc      7986 May 26 09:32 run_atlas
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc       105 May 26 09:32 job.xml
[2025-05-26 13:44:07] -rw-r--r-- 2 boinc boinc 224079438 May 26 09:32 EVNT.44871834._001025.pool.root.1
[2025-05-26 13:44:07] -rw-r--r-- 2 boinc boinc     15093 May 26 09:32 start_atlas.sh
[2025-05-26 13:44:07] drwxrwx--x 2 boinc boinc      4096 May 26 09:32 shared
[2025-05-26 13:44:07] -rw-r--r-- 2 boinc boinc    508876 May 26 09:32 input.tar.gz
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc         0 May 26 09:32 boinc_lockfile
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc      2555 May 26 09:32 pandaJob.out
[2025-05-26 13:44:07] -rw------- 1 boinc boinc    990811 May 26 09:33 agis_schedconf.cvmfs.json
[2025-05-26 13:44:07] drwx------ 4 boinc boinc      4096 May 26 09:33 pilot3
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc      6641 May 26 10:33 init_data.xml
[2025-05-26 13:44:07] -rw------- 1 boinc boinc 200472167 May 26 13:42 HITS.44871837._025699.pool.root.1
[2025-05-26 13:44:07] -rw------- 1 boinc boinc        95 May 26 13:43 pilot_heartbeat.json
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc       531 May 26 13:43 boinc_task_state.xml
[2025-05-26 13:44:07] -rw------- 1 boinc boinc      1033 May 26 13:43 memory_monitor_summary.json
[2025-05-26 13:44:07] -rw------- 1 boinc boinc   1596740 May 26 13:43 agis_ddmendpoints.agis.ALL.json
[2025-05-26 13:44:07] -rw------- 1 boinc boinc    327465 May 26 13:43 log.44871837._025699.job.log.tgz.1
[2025-05-26 13:44:07] -rw------- 1 boinc boinc      7720 May 26 13:43 heartbeat.json
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc      8192 May 26 13:43 boinc_mmap_file
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc        28 May 26 13:43 wrapper_checkpoint.txt
[2025-05-26 13:44:07] -rw------- 1 boinc boinc      4744 May 26 13:44 pilotlog.txt
[2025-05-26 13:44:07] -rw------- 1 boinc boinc   1381930 May 26 13:44 log.44871837._025699.job.log.1
[2025-05-26 13:44:07] -rw------- 1 boinc boinc       357 May 26 13:44 output.list
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc       620 May 26 13:44 runtime_log
[2025-05-26 13:44:07] -rw------- 1 boinc boinc   1730560 May 26 13:44 result.tar.gz
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc      9026 May 26 13:44 runtime_log.err
[2025-05-26 13:44:07] -rw------- 1 boinc boinc       665 May 26 13:44 qyTNDmUFDd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCYNKDmn08mcm.diag
[2025-05-26 13:44:07] -rw-r--r-- 1 boinc boinc     20634 May 26 13:44 stderr.txt
[2025-05-26 13:44:07] HITS file was successfully produced:
[2025-05-26 13:44:07] -rw------- 1 boinc boinc 200472167 May 26 13:42 shared/HITS.pool.root.1
[2025-05-26 13:44:07]  *** Contents of shared directory: ***
[2025-05-26 13:44:07] total 416820
[2025-05-26 13:44:07] -rw-r--r-- 2 boinc boinc 224079438 May 26 09:32 ATLAS.root_0
[2025-05-26 13:44:07] -rw-r--r-- 2 boinc boinc     15093 May 26 09:32 start_atlas.sh
[2025-05-26 13:44:07] -rw-r--r-- 2 boinc boinc    508876 May 26 09:32 input.tar.gz
[2025-05-26 13:44:07] -rw------- 1 boinc boinc 200472167 May 26 13:42 HITS.pool.root.1
[2025-05-26 13:44:07] -rw------- 1 boinc boinc   1730560 May 26 13:44 result.tar.gz
13:44:08 (1259506): run_atlas exited; CPU time 57624.589320
13:44:08 (1259506): called boinc_finish(0)

</stderr_txt>
]]>

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