Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:04:11 (65079): wrapper (7.7.26015): starting
04:04:11 (65079): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 04:04:11] Arguments: --nthreads 8
[2025-05-25 04:04:11] Threads: 8
[2025-05-25 04:04:11] Checking for CVMFS
[2025-05-25 04:04:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 04:04:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 04:04:12] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 04:04:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 04:04:12] 2.11.2.0 5200 14118 160668 146394 2 519 16714811 18432000 20288 130560 0 81950118 99.258 121685537 50053 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 04:04:12] CVMFS is ok
[2025-05-25 04:04:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 04:04:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 04:04:12] Further information can be found at the LHC@home message board.
[2025-05-25 04:04:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 04:04:12] Checking for apptainer binary...
[2025-05-25 04:04:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 04:04:12] Running /usr/bin/apptainer --version
[2025-05-25 04:04:13] apptainer version 1.3.2-1.el7
[2025-05-25 04:04:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 04:04:18] c-212-7.aglt2.org
[2025-05-25 04:04:18] apptainer works
[2025-05-25 04:04:18] Set ATHENA_PROC_NUMBER=8
[2025-05-25 04:04:18] Set ATHENA_CORE_NUMBER=8
[2025-05-25 04:04:18] Starting ATLAS job with PandaID=6665686013
[2025-05-25 04:04:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:00:27 (74838): wrapper (7.7.26015): starting
05:00:27 (74838): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 05:00:27] Arguments: --nthreads 8
[2025-05-25 05:00:27] Threads: 8
[2025-05-25 05:00:27] This job has been restarted, cleaning up previous attempt
[2025-05-25 05:00:27] Checking for CVMFS
[2025-05-25 05:00:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 05:00:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 05:00:27] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 05:00:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 05:00:28] 2.11.2.0 5200 14175 154048 146395 2 656 16990607 18432001 19022 130560 0 82336359 99.261 121696534 49935 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 05:00:28] CVMFS is ok
[2025-05-25 05:00:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 05:00:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 05:00:28] Further information can be found at the LHC@home message board.
[2025-05-25 05:00:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 05:00:28] Checking for apptainer binary...
[2025-05-25 05:00:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 05:00:28] Running /usr/bin/apptainer --version
[2025-05-25 05:00:28] apptainer version 1.3.2-1.el7
[2025-05-25 05:00:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 05:00:30] c-212-7.aglt2.org
[2025-05-25 05:00:30] apptainer works
[2025-05-25 05:00:30] Set ATHENA_PROC_NUMBER=8
[2025-05-25 05:00:30] Set ATHENA_CORE_NUMBER=8
[2025-05-25 05:00:30] Starting ATLAS job with PandaID=6665686013
[2025-05-25 05:00:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 10:01:37]  *** The last 200 lines of the pilot log: ***
[2025-05-25 10:01:37] 2025-05-25 14:01:18,317 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6665686013/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 10:01:37] 2025-05-25 14:01:18,318 | INFO     | extracted standard info from prmon json
[2025-05-25 10:01:37] 2025-05-25 14:01:18,318 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 10:01:37] 2025-05-25 14:01:18,318 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 10:01:37] 2025-05-25 14:01:18,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 10:01:37] 2025-05-25 14:01:18,318 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 10:01:37] 2025-05-25 14:01:18,323 | INFO     | fitting pss+swap vs Time
[2025-05-25 10:01:37] 2025-05-25 14:01:18,323 | INFO     | sum of square deviations: 7879786451.7959
[2025-05-25 10:01:37] 2025-05-25 14:01:18,325 | INFO     | sum of deviations: 50010427769.75513
[2025-05-25 10:01:37] 2025-05-25 14:01:18,325 | INFO     | mean x: 1748172629.6122448
[2025-05-25 10:01:37] 2025-05-25 14:01:18,326 | INFO     | mean y: 2453979.7346938774
[2025-05-25 10:01:37] 2025-05-25 14:01:18,326 | INFO     | -- intersect: -11092626014.769524
[2025-05-25 10:01:37] 2025-05-25 14:01:18,326 | INFO     | intersect: -11092626014.769524
[2025-05-25 10:01:37] 2025-05-25 14:01:18,326 | INFO     | chi2: 2.4826188789666053
[2025-05-25 10:01:37] 2025-05-25 14:01:18,326 | INFO     | sum of square deviations: 7484561199.231838
[2025-05-25 10:01:37] 2025-05-25 14:01:18,328 | INFO     | sum of deviations: 69230163331.10031
[2025-05-25 10:01:37] 2025-05-25 14:01:18,328 | INFO     | mean x: 1748172477.1141868
[2025-05-25 10:01:37] 2025-05-25 14:01:18,328 | INFO     | mean y: 2461286.5121107264
[2025-05-25 10:01:37] 2025-05-25 14:01:18,328 | INFO     | -- intersect: -16167660501.518782
[2025-05-25 10:01:37] 2025-05-25 14:01:18,329 | INFO     | intersect: -16167660501.518782
[2025-05-25 10:01:37] 2025-05-25 14:01:18,329 | INFO     | chi2: 1.6163386490895406
[2025-05-25 10:01:37] 2025-05-25 14:01:18,329 | INFO     | current chi2=1.6163386490895406 (change=34.89380658531266 %)
[2025-05-25 10:01:37] 2025-05-25 14:01:18,329 | INFO     | sum of square deviations: 7102778059.165465
[2025-05-25 10:01:37] 2025-05-25 14:01:18,331 | INFO     | sum of deviations: 67596621975.54575
[2025-05-25 10:01:37] 2025-05-25 14:01:18,331 | INFO     | mean x: 1748172324.616197
[2025-05-25 10:01:37] 2025-05-25 14:01:18,331 | INFO     | mean y: 2460633.9683098593
[2025-05-25 10:01:37] 2025-05-25 14:01:18,331 | INFO     | -- intersect: -16634768178.595274
[2025-05-25 10:01:37] 2025-05-25 14:01:18,331 | INFO     | intersect: -16634768178.595274
[2025-05-25 10:01:37] 2025-05-25 14:01:18,332 | INFO     | chi2: 1.6165847466200638
[2025-05-25 10:01:37] 2025-05-25 14:01:18,332 | INFO     | current chi2=1.6165847466200638 (change=-0.015225616900381902 %)
[2025-05-25 10:01:37] 2025-05-25 14:01:18,332 | INFO     | right removable region: 283
[2025-05-25 10:01:37] 2025-05-25 14:01:18,332 | INFO     | sum of square deviations: 7484541069.231838
[2025-05-25 10:01:37] 2025-05-25 14:01:18,334 | INFO     | sum of deviations: -326459044.4082947
[2025-05-25 10:01:37] 2025-05-25 14:01:18,334 | INFO     | mean x: 1748172782.1141868
[2025-05-25 10:01:37] 2025-05-25 14:01:18,334 | INFO     | mean y: 2473275.7093425607
[2025-05-25 10:01:37] 2025-05-25 14:01:18,334 | INFO     | -- intersect: 78724686.53474414
[2025-05-25 10:01:37] 2025-05-25 14:01:18,334 | INFO     | intersect: 78724686.53474414
[2025-05-25 10:01:37] 2025-05-25 14:01:18,334 | INFO     | chi2: 0.901368901912295
[2025-05-25 10:01:37] 2025-05-25 14:01:18,334 | INFO     | current chi2=0.901368901912295 (change=63.69282012841651 %)
[2025-05-25 10:01:37] 2025-05-25 14:01:18,335 | INFO     | sum of square deviations: 7102737799.165465
[2025-05-25 10:01:37] 2025-05-25 14:01:18,336 | INFO     | sum of deviations: -4547668792.084509
[2025-05-25 10:01:37] 2025-05-25 14:01:18,336 | INFO     | mean x: 1748172934.616197
[2025-05-25 10:01:37] 2025-05-25 14:01:18,337 | INFO     | mean y: 2474946.3661971833
[2025-05-25 10:01:37] 2025-05-25 14:01:18,337 | INFO     | -- intersect: 1121777350.9762855
[2025-05-25 10:01:37] 2025-05-25 14:01:18,337 | INFO     | intersect: 1121777350.9762855
[2025-05-25 10:01:37] 2025-05-25 14:01:18,337 | INFO     | chi2: 0.8857501719524541
[2025-05-25 10:01:37] 2025-05-25 14:01:18,337 | INFO     | current chi2=0.8857501719524541 (change=1.7327788796246555 %)
[2025-05-25 10:01:37] 2025-05-25 14:01:18,337 | INFO     | left removable region: 20
[2025-05-25 10:01:37] 2025-05-25 14:01:18,337 | INFO     | sum of square deviations: 5640747748.859347
[2025-05-25 10:01:37] 2025-05-25 14:01:18,339 | INFO     | sum of deviations: 10915156974.615973
[2025-05-25 10:01:37] 2025-05-25 14:01:18,339 | INFO     | mean x: 1748172904.1254752
[2025-05-25 10:01:37] 2025-05-25 14:01:18,339 | INFO     | mean y: 2484039.072243346
[2025-05-25 10:01:37] 2025-05-25 14:01:18,339 | INFO     | -- intersect: -3380326630.161894
[2025-05-25 10:01:37] 2025-05-25 14:01:18,339 | INFO     | intersect: -3380326630.161894
[2025-05-25 10:01:37] 2025-05-25 14:01:18,339 | INFO     | chi2: 0.0009606239454268536
[2025-05-25 10:01:37] 2025-05-25 14:01:18,339 | INFO     | -- intersect: -3380326630.161894
[2025-05-25 10:01:37] 2025-05-25 14:01:18,340 | INFO     | current memory leak: 1.94 B/s (using 263 data points, chi2=0.00)
[2025-05-25 10:01:37] 2025-05-25 14:01:18,340 | INFO     | ..............................
[2025-05-25 10:01:37] 2025-05-25 14:01:18,340 | INFO     | . Timing measurements:
[2025-05-25 10:01:37] 2025-05-25 14:01:18,340 | INFO     | . get job = 0 s
[2025-05-25 10:01:37] 2025-05-25 14:01:18,340 | INFO     | . initial setup = 1 s
[2025-05-25 10:01:37] 2025-05-25 14:01:18,340 | INFO     | . payload setup = 13 s
[2025-05-25 10:01:37] 2025-05-25 14:01:18,340 | INFO     | . stage-in = 0 s
[2025-05-25 10:01:37] 2025-05-25 14:01:18,341 | INFO     | . payload execution = 17946 s
[2025-05-25 10:01:37] 2025-05-25 14:01:18,341 | INFO     | . stage-out = 4 s
[2025-05-25 10:01:37] 2025-05-25 14:01:18,341 | INFO     | . log creation = 0 s
[2025-05-25 10:01:37] 2025-05-25 14:01:18,341 | INFO     | ..............................
[2025-05-25 10:01:37] 2025-05-25 14:01:18,626 | INFO     | 
[2025-05-25 10:01:37] 2025-05-25 14:01:18,627 | INFO     | job summary report
[2025-05-25 10:01:37] 2025-05-25 14:01:18,627 | INFO     | --------------------------------------------------
[2025-05-25 10:01:37] 2025-05-25 14:01:18,627 | INFO     | PanDA job id: 6665686013
[2025-05-25 10:01:37] 2025-05-25 14:01:18,627 | INFO     | task id: 44871837
[2025-05-25 10:01:37] 2025-05-25 14:01:18,627 | INFO     | errors: (none)
[2025-05-25 10:01:37] 2025-05-25 14:01:18,627 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 10:01:37] 2025-05-25 14:01:18,627 | INFO     | pilot state: finished 
[2025-05-25 10:01:37] 2025-05-25 14:01:18,627 | INFO     | transexitcode: 0
[2025-05-25 10:01:37] 2025-05-25 14:01:18,627 | INFO     | exeerrorcode: 0
[2025-05-25 10:01:37] 2025-05-25 14:01:18,627 | INFO     | exeerrordiag: 
[2025-05-25 10:01:37] 2025-05-25 14:01:18,627 | INFO     | exitcode: 0
[2025-05-25 10:01:37] 2025-05-25 14:01:18,628 | INFO     | exitmsg: OK
[2025-05-25 10:01:37] 2025-05-25 14:01:18,628 | INFO     | cpuconsumptiontime: 44994 s
[2025-05-25 10:01:37] 2025-05-25 14:01:18,628 | INFO     | nevents: 400
[2025-05-25 10:01:37] 2025-05-25 14:01:18,628 | INFO     | neventsw: 0
[2025-05-25 10:01:37] 2025-05-25 14:01:18,628 | INFO     | pid: 44370
[2025-05-25 10:01:37] 2025-05-25 14:01:18,628 | INFO     | pgrp: 44370
[2025-05-25 10:01:37] 2025-05-25 14:01:18,628 | INFO     | corecount: 8
[2025-05-25 10:01:37] 2025-05-25 14:01:18,628 | INFO     | event service: False
[2025-05-25 10:01:37] 2025-05-25 14:01:18,628 | INFO     | sizes: {0: 2393741, 8: 2393947, 11: 2393975, 17960: 2426144, 17961: 2426143, 17966: 2435140, 17968: 2435324, 18014: 2435494}
[2025-05-25 10:01:37] 2025-05-25 14:01:18,628 | INFO     | --------------------------------------------------
[2025-05-25 10:01:37] 2025-05-25 14:01:18,628 | INFO     | 
[2025-05-25 10:01:37] 2025-05-25 14:01:18,628 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-25 10:01:37] 2025-05-25 14:01:18,996 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,997 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,998 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 10:01:37] 2025-05-25 14:01:18,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,998 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 10:01:37] 2025-05-25 14:01:18,998 | INFO     | job 6665686013 has completed (purged errors)
[2025-05-25 10:01:37] 2025-05-25 14:01:18,998 | INFO     | overall cleanup function is called
[2025-05-25 10:01:37] 2025-05-25 14:01:20,012 | INFO     | --- collectZombieJob: --- 10, [44370]
[2025-05-25 10:01:37] 2025-05-25 14:01:20,012 | INFO     | zombie collector waiting for pid 44370
[2025-05-25 10:01:37] 2025-05-25 14:01:20,012 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 10:01:37] 2025-05-25 14:01:20,013 | INFO     | collected zombie processes
[2025-05-25 10:01:37] 2025-05-25 14:01:20,013 | INFO     | will attempt to kill all subprocesses of pid=44370
[2025-05-25 10:01:37] 2025-05-25 14:01:20,571 | INFO     | process IDs to be killed: [44370] (in reverse order)
[2025-05-25 10:01:37] 2025-05-25 14:01:21,656 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 10:01:37] 2025-05-25 14:01:21,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 10:01:37] 2025-05-25 14:01:21,667 | INFO     | did not find any defunct processes belonging to 44370
[2025-05-25 10:01:37] 2025-05-25 14:01:21,678 | INFO     | did not find any defunct processes belonging to 44370
[2025-05-25 10:01:37] 2025-05-25 14:01:21,678 | INFO     | ready for new job
[2025-05-25 10:01:37] 2025-05-25 14:01:21,679 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 10:01:37] 2025-05-25 14:01:21,681 | INFO     | **************************************
[2025-05-25 10:01:37] 2025-05-25 14:01:21,681 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 10:01:37] 2025-05-25 14:01:21,681 | INFO     | **************************************
[2025-05-25 10:01:37] 2025-05-25 14:01:21,681 | INFO     | 
[2025-05-25 10:01:37] 2025-05-25 14:01:21,685 | INFO     | architecture information:
[2025-05-25 10:01:37] 2025-05-25 14:01:21,686 | INFO     | executing command: cat /etc/os-release
[2025-05-25 10:01:37] 2025-05-25 14:01:21,756 | INFO     | cat /etc/os-release:
[2025-05-25 10:01:37] NAME="CentOS Linux"
[2025-05-25 10:01:37] VERSION="7 (Core)"
[2025-05-25 10:01:37] ID="centos"
[2025-05-25 10:01:37] ID_LIKE="rhel fedora"
[2025-05-25 10:01:37] VERSION_ID="7"
[2025-05-25 10:01:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 10:01:37] ANSI_COLOR="0;31"
[2025-05-25 10:01:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 10:01:37] HOME_URL="https://www.centos.org/"
[2025-05-25 10:01:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 10:01:37] 
[2025-05-25 10:01:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 10:01:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 10:01:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 10:01:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 10:01:37] 
[2025-05-25 10:01:37] 2025-05-25 14:01:21,756 | INFO     | **************************************
[2025-05-25 10:01:37] 2025-05-25 14:01:22,259 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-25 10:01:37] 2025-05-25 14:01:22,362 | INFO     | sufficient remaining disk space (103629717504 B)
[2025-05-25 10:01:37] 2025-05-25 14:01:22,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 10:01:37] 2025-05-25 14:01:22,363 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 10:01:37] 2025-05-25 14:01:22,363 | INFO     | update_server=False
[2025-05-25 10:01:37] 2025-05-25 14:01:22,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 10:01:37] 2025-05-25 14:01:22,363 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 10:01:37] 2025-05-25 14:01:22,364 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 10:01:37] 2025-05-25 14:01:22,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 10:01:37] 2025-05-25 14:01:22,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 10:01:37] 2025-05-25 14:01:22,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 10:01:37] 2025-05-25 14:01:22,587 | INFO     | aborting loop
[2025-05-25 10:01:37] 2025-05-25 14:01:22,895 | INFO     | all job control threads have been joined
[2025-05-25 10:01:37] 2025-05-25 14:01:22,939 | INFO     | all data control threads have been joined
[2025-05-25 10:01:37] 2025-05-25 14:01:23,127 | INFO     | all payload control threads have been joined
[2025-05-25 10:01:37] 2025-05-25 14:01:23,368 | INFO     | [job] retrieve thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:23,385 | INFO     | [data] copytool_in thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:23,403 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:23,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 10:01:37] 2025-05-25 14:01:23,592 | INFO     | [job] job monitor thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:23,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 10:01:37] 2025-05-25 14:01:23,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 10:01:37] 2025-05-25 14:01:23,901 | INFO     | [job] control thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:23,945 | INFO     | [data] control thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:24,072 | INFO     | [payload] failed_post thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:24,132 | INFO     | [payload] control thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:24,214 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:24,451 | INFO     | [payload] validate_post thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:24,597 | INFO     | [job] validate thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:24,601 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:24,667 | INFO     | [job] queue monitor thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:24,751 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:25,654 | INFO     | [data] copytool_out thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:27,545 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 10:01:37] 2025-05-25 14:01:29,185 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139902095836992)>', '<ExcThread(monitor, started 139901798422272)>']
[2025-05-25 10:01:37] 2025-05-25 14:01:29,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 10:01:37] 2025-05-25 14:01:29,413 | INFO     | [monitor] control thread has ended
[2025-05-25 10:01:37] 2025-05-25 14:01:34,211 | INFO     | all workflow threads have been joined
[2025-05-25 10:01:37] 2025-05-25 14:01:34,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 10:01:37] 2025-05-25 14:01:34,212 | INFO     | traces error code: 0
[2025-05-25 10:01:37] 2025-05-25 14:01:34,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 10:01:37] 2025-05-25 14:01:34,567 [wrapper] ==== pilot stdout END ====
[2025-05-25 10:01:37] 2025-05-25 14:01:34,611 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 10:01:37] 2025-05-25 14:01:34,648 [wrapper] pilotpid: 97115
[2025-05-25 10:01:37] 2025-05-25 14:01:34,688 [wrapper] Pilot exit status: 0
[2025-05-25 10:01:37] 2025-05-25 14:01:34,896 [wrapper] pandaids: 6665686013 6665686013
[2025-05-25 10:01:37] 2025-05-25 14:01:35,370 [wrapper] cleanup supervisor_pilot 33948 97116
[2025-05-25 10:01:37] 2025-05-25 14:01:35,414 [wrapper] Test setup, not cleaning
[2025-05-25 10:01:37] 2025-05-25 14:01:35,460 [wrapper] apfmon messages muted
[2025-05-25 10:01:37] 2025-05-25 14:01:35,476 [wrapper] ==== wrapper stdout END ====
[2025-05-25 10:01:37] 2025-05-25 14:01:35,488 [wrapper] ==== wrapper stderr END ====
[2025-05-25 10:01:37]  *** Error codes and diagnostics ***
[2025-05-25 10:01:37]     "exeErrorCode": 0,
[2025-05-25 10:01:37]     "exeErrorDiag": "",
[2025-05-25 10:01:37]     "pilotErrorCode": 0,
[2025-05-25 10:01:37]     "pilotErrorDiag": "",
[2025-05-25 10:01:37]  *** Listing of results directory ***
[2025-05-25 10:01:37] total 628796
[2025-05-25 10:01:37] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas    495897 May 24 21:25 pilot3.tar.gz
[2025-05-25 10:01:37] -rwx------ 1 boincer umatlas     37140 May 24 21:33 runpilot2-wrapper.sh
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas      5111 May 24 21:33 queuedata.json
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas       100 May 25 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 10:01:37] -rwxr-xr-x 1 boincer umatlas      7986 May 25 04:04 run_atlas
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas       105 May 25 04:04 job.xml
[2025-05-25 10:01:37] -rw-r--r-- 3 boincer umatlas 222649860 May 25 04:04 EVNT.44871834._001079.pool.root.1
[2025-05-25 10:01:37] -rw-r--r-- 3 boincer umatlas 222649860 May 25 04:04 ATLAS.root_0
[2025-05-25 10:01:37] -rw-r--r-- 2 boincer umatlas     15093 May 25 04:04 start_atlas.sh
[2025-05-25 10:01:37] drwxrwx--x 2 boincer umatlas      4096 May 25 04:04 shared
[2025-05-25 10:01:37] -rw-r--r-- 2 boincer umatlas    508875 May 25 04:04 input.tar.gz
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas         0 May 25 04:04 boinc_lockfile
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas      2559 May 25 05:00 pandaJob.out
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas    990811 May 25 05:00 agis_schedconf.cvmfs.json
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas 190861351 May 25 09:59 HITS.44871837._027066.pool.root.1
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas       531 May 25 09:59 boinc_task_state.xml
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas      1075 May 25 10:00 memory_monitor_summary.json
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas   1596740 May 25 10:00 agis_ddmendpoints.agis.ALL.json
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas    433562 May 25 10:00 log.44871837._027066.job.log.tgz.1
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas        95 May 25 10:01 pilot_heartbeat.json
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas      6387 May 25 10:01 init_data.xml
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas      7741 May 25 10:01 heartbeat.json
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas      4477 May 25 10:01 pilotlog.txt
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas   1517250 May 25 10:01 log.44871837._027066.job.log.1
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas        28 May 25 10:01 wrapper_checkpoint.txt
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas      8192 May 25 10:01 boinc_mmap_file
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas       357 May 25 10:01 output.list
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas       620 May 25 10:01 runtime_log
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas   1966080 May 25 10:01 result.tar.gz
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas      8740 May 25 10:01 runtime_log.err
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas       786 May 25 10:01 9XxLDmmPFd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbeNKDmsxAETm.diag
[2025-05-25 10:01:37] -rw-r--r-- 1 boincer umatlas     23089 May 25 10:01 stderr.txt
[2025-05-25 10:01:37] HITS file was successfully produced:
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas 190861351 May 25 09:59 shared/HITS.pool.root.1
[2025-05-25 10:01:37]  *** Contents of shared directory: ***
[2025-05-25 10:01:37] total 406264
[2025-05-25 10:01:37] -rw-r--r-- 3 boincer umatlas 222649860 May 25 04:04 ATLAS.root_0
[2025-05-25 10:01:37] -rw-r--r-- 2 boincer umatlas     15093 May 25 04:04 start_atlas.sh
[2025-05-25 10:01:37] -rw-r--r-- 2 boincer umatlas    508875 May 25 04:04 input.tar.gz
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas 190861351 May 25 09:59 HITS.pool.root.1
[2025-05-25 10:01:37] -rw------- 1 boincer umatlas   1966080 May 25 10:01 result.tar.gz
10:01:38 (74838): run_atlas exited; CPU time 44519.641067
10:01:38 (74838): called boinc_finish(0)

</stderr_txt>
]]>

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