Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:06:55 (1866934): wrapper (7.7.26015): starting
12:06:55 (1866934): wrapper: running run_atlas (--nthreads 9)
[2025-05-25 12:06:55] Arguments: --nthreads 9
[2025-05-25 12:06:55] Threads: 9
[2025-05-25 12:06:55] Checking for CVMFS
[2025-05-25 12:06:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 12:06:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 12:06:55] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 12:06:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 12:06:56] 2.12.6.0 3369999 9090 281960 146407 3 582 23870362 32935936 21806 16776704 0 29738664 99.499 38414957 37989 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 12:06:56] CVMFS is ok
[2025-05-25 12:06:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 12:06:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 12:06:56] Further information can be found at the LHC@home message board.
[2025-05-25 12:06:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 12:06:56] Checking for apptainer binary...
[2025-05-25 12:06:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 12:06:56] Running /usr/bin/apptainer --version
[2025-05-25 12:06:56] apptainer version 1.4.1-1.el9
[2025-05-25 12:06:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 12:06:56] c6-2-29-1.aglt2.org
[2025-05-25 12:06:56] apptainer works
[2025-05-25 12:06:56] Set ATHENA_PROC_NUMBER=9
[2025-05-25 12:06:56] Set ATHENA_CORE_NUMBER=9
[2025-05-25 12:06:57] Starting ATLAS job with PandaID=6665685632
[2025-05-25 12:06:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 16:42:02]  *** The last 200 lines of the pilot log: ***
[2025-05-25 16:42:02] 2025-05-25 20:41:46,544 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 16:42:02] 2025-05-25 20:41:46,544 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 16:42:02] 2025-05-25 20:41:46,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 16:42:02] 2025-05-25 20:41:46,549 | INFO     | fitting pss+swap vs Time
[2025-05-25 16:42:02] 2025-05-25 20:41:46,550 | INFO     | sum of square deviations: 6035604225.003752
[2025-05-25 16:42:02] 2025-05-25 20:41:46,551 | INFO     | sum of deviations: 81590020573.5428
[2025-05-25 16:42:02] 2025-05-25 20:41:46,552 | INFO     | mean x: 1748197460.3048327
[2025-05-25 16:42:02] 2025-05-25 20:41:46,552 | INFO     | mean y: 2158122.5055762082
[2025-05-25 16:42:02] 2025-05-25 20:41:46,552 | INFO     | -- intersect: -23630184462.51505
[2025-05-25 16:42:02] 2025-05-25 20:41:46,552 | INFO     | intersect: -23630184462.51505
[2025-05-25 16:42:02] 2025-05-25 20:41:46,552 | INFO     | chi2: 2.347566380494492
[2025-05-25 16:42:02] 2025-05-25 20:41:46,553 | INFO     | sum of square deviations: 5705278854.5303135
[2025-05-25 16:42:02] 2025-05-25 20:41:46,555 | INFO     | sum of deviations: 81280213971.76518
[2025-05-25 16:42:02] 2025-05-25 20:41:46,555 | INFO     | mean x: 1748197307.810606
[2025-05-25 16:42:02] 2025-05-25 20:41:46,555 | INFO     | mean y: 2157974.6553030303
[2025-05-25 16:42:02] 2025-05-25 20:41:46,555 | INFO     | -- intersect: -24903522337.689003
[2025-05-25 16:42:02] 2025-05-25 20:41:46,555 | INFO     | intersect: -24903522337.689003
[2025-05-25 16:42:02] 2025-05-25 20:41:46,555 | INFO     | chi2: 2.343000215916956
[2025-05-25 16:42:02] 2025-05-25 20:41:46,555 | INFO     | current chi2=2.343000215916956 (change=0.19450630301556354 %)
[2025-05-25 16:42:02] 2025-05-25 20:41:46,556 | INFO     | right removable region: 263
[2025-05-25 16:42:02] 2025-05-25 20:41:46,556 | INFO     | sum of square deviations: 5705228834.5303135
[2025-05-25 16:42:02] 2025-05-25 20:41:46,558 | INFO     | sum of deviations: 28998517879.143948
[2025-05-25 16:42:02] 2025-05-25 20:41:46,558 | INFO     | mean x: 1748197612.810606
[2025-05-25 16:42:02] 2025-05-25 20:41:46,558 | INFO     | mean y: 2182293.662878788
[2025-05-25 16:42:02] 2025-05-25 20:41:46,558 | INFO     | -- intersect: -8883550636.896889
[2025-05-25 16:42:02] 2025-05-25 20:41:46,558 | INFO     | intersect: -8883550636.896889
[2025-05-25 16:42:02] 2025-05-25 20:41:46,558 | INFO     | chi2: 0.22768039443921398
[2025-05-25 16:42:02] 2025-05-25 20:41:46,558 | INFO     | current chi2=0.22768039443921398 (change=90.30142890395051 %)
[2025-05-25 16:42:02] 2025-05-25 20:41:46,559 | INFO     | sum of square deviations: 5387148847.66792
[2025-05-25 16:42:02] 2025-05-25 20:41:46,561 | INFO     | sum of deviations: 17917655672.88802
[2025-05-25 16:42:02] 2025-05-25 20:41:46,561 | INFO     | mean x: 1748197765.3127413
[2025-05-25 16:42:02] 2025-05-25 20:41:46,561 | INFO     | mean y: 2187568.7915057917
[2025-05-25 16:42:02] 2025-05-25 20:41:46,561 | INFO     | -- intersect: -5812317746.1202755
[2025-05-25 16:42:02] 2025-05-25 20:41:46,561 | INFO     | intersect: -5812317746.1202755
[2025-05-25 16:42:02] 2025-05-25 20:41:46,561 | INFO     | chi2: 0.10010834292958082
[2025-05-25 16:42:02] 2025-05-25 20:41:46,562 | INFO     | current chi2=0.10010834292958082 (change=56.031197514326294 %)
[2025-05-25 16:42:02] 2025-05-25 20:41:46,562 | INFO     | sum of square deviations: 5081115720.303191
[2025-05-25 16:42:02] 2025-05-25 20:41:46,564 | INFO     | sum of deviations: 16939342563.086613
[2025-05-25 16:42:02] 2025-05-25 20:41:46,564 | INFO     | mean x: 1748197917.8149607
[2025-05-25 16:42:02] 2025-05-25 20:41:46,564 | INFO     | mean y: 2188055.6614173227
[2025-05-25 16:42:02] 2025-05-25 20:41:46,564 | INFO     | -- intersect: -5825926285.37062
[2025-05-25 16:42:02] 2025-05-25 20:41:46,564 | INFO     | intersect: -5825926285.37062
[2025-05-25 16:42:02] 2025-05-25 20:41:46,564 | INFO     | chi2: 0.09971458012531126
[2025-05-25 16:42:02] 2025-05-25 20:41:46,564 | INFO     | current chi2=0.09971458012531126 (change=0.393336651817865 %)
[2025-05-25 16:42:02] 2025-05-25 20:41:46,565 | INFO     | left removable region: 30
[2025-05-25 16:42:02] 2025-05-25 20:41:46,565 | INFO     | sum of square deviations: 3922071462.53218
[2025-05-25 16:42:02] 2025-05-25 20:41:46,567 | INFO     | sum of deviations: 14765277729.39485
[2025-05-25 16:42:02] 2025-05-25 20:41:46,567 | INFO     | mean x: 1748198192.3433475
[2025-05-25 16:42:02] 2025-05-25 20:41:46,567 | INFO     | mean y: 2189995.5450643776
[2025-05-25 16:42:02] 2025-05-25 20:41:46,567 | INFO     | -- intersect: -6579187239.052883
[2025-05-25 16:42:02] 2025-05-25 20:41:46,567 | INFO     | intersect: -6579187239.052883
[2025-05-25 16:42:02] 2025-05-25 20:41:46,567 | INFO     | chi2: 0.09044682597358177
[2025-05-25 16:42:02] 2025-05-25 20:41:46,567 | INFO     | -- intersect: -6579187239.052883
[2025-05-25 16:42:02] 2025-05-25 20:41:46,567 | INFO     | current memory leak: 3.76 B/s (using 233 data points, chi2=0.09)
[2025-05-25 16:42:02] 2025-05-25 20:41:46,568 | INFO     | ..............................
[2025-05-25 16:42:02] 2025-05-25 20:41:46,568 | INFO     | . Timing measurements:
[2025-05-25 16:42:02] 2025-05-25 20:41:46,568 | INFO     | . get job = 0 s
[2025-05-25 16:42:02] 2025-05-25 20:41:46,568 | INFO     | . initial setup = 3 s
[2025-05-25 16:42:02] 2025-05-25 20:41:46,568 | INFO     | . payload setup = 15 s
[2025-05-25 16:42:02] 2025-05-25 20:41:46,569 | INFO     | . stage-in = 0 s
[2025-05-25 16:42:02] 2025-05-25 20:41:46,569 | INFO     | . payload execution = 16417 s
[2025-05-25 16:42:02] 2025-05-25 20:41:46,569 | INFO     | . stage-out = 2 s
[2025-05-25 16:42:02] 2025-05-25 20:41:46,569 | INFO     | . log creation = 0 s
[2025-05-25 16:42:02] 2025-05-25 20:41:46,569 | INFO     | ..............................
[2025-05-25 16:42:02] 2025-05-25 20:41:46,664 | INFO     | 
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | job summary report
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | --------------------------------------------------
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | PanDA job id: 6665685632
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | task id: 44871837
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | errors: (none)
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | pilot state: finished 
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | transexitcode: 0
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | exeerrorcode: 0
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | exeerrordiag: 
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | exitcode: 0
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | exitmsg: OK
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | cpuconsumptiontime: 51895 s
[2025-05-25 16:42:02] 2025-05-25 20:41:46,665 | INFO     | nevents: 400
[2025-05-25 16:42:02] 2025-05-25 20:41:46,666 | INFO     | neventsw: 0
[2025-05-25 16:42:02] 2025-05-25 20:41:46,666 | INFO     | pid: 1888335
[2025-05-25 16:42:02] 2025-05-25 20:41:46,666 | INFO     | pgrp: 1888335
[2025-05-25 16:42:02] 2025-05-25 20:41:46,666 | INFO     | corecount: 9
[2025-05-25 16:42:02] 2025-05-25 20:41:46,666 | INFO     | event service: False
[2025-05-25 16:42:02] 2025-05-25 20:41:46,666 | INFO     | sizes: {0: 2393739, 1: 2393739, 10: 2393973, 12: 2394001, 16437: 2425554, 16439: 2434495, 16441: 2434679, 16447: 2434849}
[2025-05-25 16:42:02] 2025-05-25 20:41:46,666 | INFO     | --------------------------------------------------
[2025-05-25 16:42:02] 2025-05-25 20:41:46,666 | INFO     | 
[2025-05-25 16:42:02] 2025-05-25 20:41:46,666 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-25 16:42:02] 2025-05-25 20:41:46,684 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,684 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,684 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,684 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,684 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,684 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,684 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,684 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 16:42:02] 2025-05-25 20:41:46,685 | INFO     | job 6665685632 has completed (purged errors)
[2025-05-25 16:42:02] 2025-05-25 20:41:46,686 | INFO     | overall cleanup function is called
[2025-05-25 16:42:02] 2025-05-25 20:41:47,441 | INFO     | PID=1871907 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-25 16:42:02] 2025-05-25 20:41:47,441 | INFO     | .. there are 31 such processes running
[2025-05-25 16:42:02] 2025-05-25 20:41:47,693 | INFO     | --- collectZombieJob: --- 10, [1888335]
[2025-05-25 16:42:02] 2025-05-25 20:41:47,693 | INFO     | zombie collector waiting for pid 1888335
[2025-05-25 16:42:02] 2025-05-25 20:41:47,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 16:42:02] 2025-05-25 20:41:47,693 | INFO     | collected zombie processes
[2025-05-25 16:42:02] 2025-05-25 20:41:47,693 | INFO     | will attempt to kill all subprocesses of pid=1888335
[2025-05-25 16:42:02] 2025-05-25 20:41:47,998 | INFO     | process IDs to be killed: [1888335] (in reverse order)
[2025-05-25 16:42:02] 2025-05-25 20:41:48,093 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 16:42:02] 2025-05-25 20:41:48,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 16:42:02] 2025-05-25 20:41:48,102 | INFO     | did not find any defunct processes belonging to 1888335
[2025-05-25 16:42:02] 2025-05-25 20:41:48,111 | INFO     | did not find any defunct processes belonging to 1888335
[2025-05-25 16:42:02] 2025-05-25 20:41:48,111 | INFO     | ready for new job
[2025-05-25 16:42:02] 2025-05-25 20:41:48,111 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 16:42:02] 2025-05-25 20:41:48,113 | INFO     | **************************************
[2025-05-25 16:42:02] 2025-05-25 20:41:48,114 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 16:42:02] 2025-05-25 20:41:48,114 | INFO     | **************************************
[2025-05-25 16:42:02] 2025-05-25 20:41:48,114 | INFO     | 
[2025-05-25 16:42:02] 2025-05-25 20:41:48,128 | INFO     | architecture information:
[2025-05-25 16:42:02] 2025-05-25 20:41:48,128 | INFO     | executing command: cat /etc/os-release
[2025-05-25 16:42:02] 2025-05-25 20:41:48,141 | INFO     | cat /etc/os-release:
[2025-05-25 16:42:02] NAME="CentOS Linux"
[2025-05-25 16:42:02] VERSION="7 (Core)"
[2025-05-25 16:42:02] ID="centos"
[2025-05-25 16:42:02] ID_LIKE="rhel fedora"
[2025-05-25 16:42:02] VERSION_ID="7"
[2025-05-25 16:42:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 16:42:02] ANSI_COLOR="0;31"
[2025-05-25 16:42:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 16:42:02] HOME_URL="https://www.centos.org/"
[2025-05-25 16:42:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 16:42:02] 
[2025-05-25 16:42:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 16:42:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 16:42:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 16:42:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 16:42:02] 
[2025-05-25 16:42:02] 2025-05-25 20:41:48,142 | INFO     | **************************************
[2025-05-25 16:42:02] 2025-05-25 20:41:48,645 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-25 16:42:02] 2025-05-25 20:41:48,662 | INFO     | sufficient remaining disk space (75092721664 B)
[2025-05-25 16:42:02] 2025-05-25 20:41:48,663 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 16:42:02] 2025-05-25 20:41:48,663 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 16:42:02] 2025-05-25 20:41:48,663 | INFO     | update_server=False
[2025-05-25 16:42:02] 2025-05-25 20:41:48,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 16:42:02] 2025-05-25 20:41:48,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:42:02] 2025-05-25 20:41:49,003 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 16:42:02] 2025-05-25 20:41:49,004 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 16:42:02] 2025-05-25 20:41:49,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:42:02] 2025-05-25 20:41:49,004 | INFO     | will abort loop
[2025-05-25 16:42:02] 2025-05-25 20:41:49,128 | INFO     | all payload control threads have been joined
[2025-05-25 16:42:02] 2025-05-25 20:41:49,451 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 16:42:02] 2025-05-25 20:41:49,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 16:42:02] 2025-05-25 20:41:49,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 16:42:02] 2025-05-25 20:41:49,527 | INFO     | all data control threads have been joined
[2025-05-25 16:42:02] 2025-05-25 20:41:49,669 | INFO     | [job] queue monitor thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:49,670 | INFO     | [job] retrieve thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:49,690 | INFO     | all job control threads have been joined
[2025-05-25 16:42:02] 2025-05-25 20:41:49,735 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 16:42:02] 2025-05-25 20:41:49,990 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:50,010 | INFO     | [job] job monitor thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:50,134 | INFO     | [payload] control thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:50,283 | INFO     | [data] copytool_in thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:50,465 | INFO     | [payload] failed_post thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:50,532 | INFO     | [data] control thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:50,541 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:50,696 | INFO     | [job] control thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:50,843 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:50,879 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:50,895 | INFO     | [payload] validate_post thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:51,073 | INFO     | [job] validate thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:51,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 16:42:02] 2025-05-25 20:41:51,741 | INFO     | [data] copytool_out thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:55,339 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 16:42:02] 2025-05-25 20:41:56,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173617866560)>', '<ExcThread(monitor, started 140173262169856)>']
[2025-05-25 16:42:02] 2025-05-25 20:41:57,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 16:42:02] 2025-05-25 20:41:57,497 | INFO     | [monitor] control thread has ended
[2025-05-25 16:42:02] 2025-05-25 20:42:02,024 | INFO     | all workflow threads have been joined
[2025-05-25 16:42:02] 2025-05-25 20:42:02,024 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 16:42:02] 2025-05-25 20:42:02,024 | INFO     | traces error code: 0
[2025-05-25 16:42:02] 2025-05-25 20:42:02,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 16:42:02] 2025-05-25 20:42:02,191 [wrapper] ==== pilot stdout END ====
[2025-05-25 16:42:02] 2025-05-25 20:42:02,193 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 16:42:02] 2025-05-25 20:42:02,197 [wrapper] pilotpid: 1871907
[2025-05-25 16:42:02] 2025-05-25 20:42:02,200 [wrapper] Pilot exit status: 0
[2025-05-25 16:42:02] 2025-05-25 20:42:02,211 [wrapper] pandaids: 6665685632
[2025-05-25 16:42:02] 2025-05-25 20:42:02,280 [wrapper] cleanup supervisor_pilot 3860430 1871908
[2025-05-25 16:42:02] 2025-05-25 20:42:02,283 [wrapper] Test setup, not cleaning
[2025-05-25 16:42:02] 2025-05-25 20:42:02,285 [wrapper] apfmon messages muted
[2025-05-25 16:42:02] 2025-05-25 20:42:02,289 [wrapper] ==== wrapper stdout END ====
[2025-05-25 16:42:02] 2025-05-25 20:42:02,291 [wrapper] ==== wrapper stderr END ====
[2025-05-25 16:42:02]  *** Error codes and diagnostics ***
[2025-05-25 16:42:02]     "exeErrorCode": 0,
[2025-05-25 16:42:02]     "exeErrorDiag": "",
[2025-05-25 16:42:02]     "pilotErrorCode": 0,
[2025-05-25 16:42:02]     "pilotErrorDiag": "",
[2025-05-25 16:42:02]  *** Listing of results directory ***
[2025-05-25 16:42:02] total 420208
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas    495897 May 24 21:25 pilot3.tar.gz
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas      5111 May 24 21:32 queuedata.json
[2025-05-25 16:42:02] -rwx------. 1 boincer umatlas     37140 May 24 21:33 runpilot2-wrapper.sh
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas       100 May 25 12:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 16:42:02] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 12:06 run_atlas
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas       105 May 25 12:06 job.xml
[2025-05-25 16:42:02] -rw-r--r--. 2 boincer umatlas 224028433 May 25 12:06 EVNT.44871834._001078.pool.root.1
[2025-05-25 16:42:02] -rw-r--r--. 2 boincer umatlas     15093 May 25 12:06 start_atlas.sh
[2025-05-25 16:42:02] drwxrwx--x. 2 boincer umatlas      4096 May 25 12:06 shared
[2025-05-25 16:42:02] -rw-r--r--. 2 boincer umatlas    508873 May 25 12:06 input.tar.gz
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas         0 May 25 12:06 boinc_lockfile
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas      2558 May 25 12:06 pandaJob.out
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas    990811 May 25 12:07 agis_schedconf.cvmfs.json
[2025-05-25 16:42:02] drwx------. 4 boincer umatlas      4096 May 25 12:07 pilot3
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas      6841 May 25 16:36 init_data.xml
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas        95 May 25 16:40 pilot_heartbeat.json
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas 198906097 May 25 16:41 HITS.44871837._027028.pool.root.1
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas       531 May 25 16:41 boinc_task_state.xml
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas      1045 May 25 16:41 memory_monitor_summary.json
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas   1596740 May 25 16:41 agis_ddmendpoints.agis.ALL.json
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas    413339 May 25 16:41 log.44871837._027028.job.log.tgz.1
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas      7724 May 25 16:41 heartbeat.json
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas        28 May 25 16:42 wrapper_checkpoint.txt
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas      8192 May 25 16:42 boinc_mmap_file
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas      4539 May 25 16:42 pilotlog.txt
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas   1353949 May 25 16:42 log.44871837._027028.job.log.1
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas       357 May 25 16:42 output.list
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas       620 May 25 16:42 runtime_log
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas   1781760 May 25 16:42 result.tar.gz
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas       657 May 25 16:42 uueLDmmPFd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmReNKDmhJ4hRm.diag
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas      8665 May 25 16:42 runtime_log.err
[2025-05-25 16:42:02] -rw-r--r--. 1 boincer umatlas     20994 May 25 16:42 stderr.txt
[2025-05-25 16:42:02] HITS file was successfully produced:
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas 198906097 May 25 16:41 shared/HITS.pool.root.1
[2025-05-25 16:42:02]  *** Contents of shared directory: ***
[2025-05-25 16:42:02] total 415288
[2025-05-25 16:42:02] -rw-r--r--. 2 boincer umatlas 224028433 May 25 12:06 ATLAS.root_0
[2025-05-25 16:42:02] -rw-r--r--. 2 boincer umatlas     15093 May 25 12:06 start_atlas.sh
[2025-05-25 16:42:02] -rw-r--r--. 2 boincer umatlas    508873 May 25 12:06 input.tar.gz
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas 198906097 May 25 16:41 HITS.pool.root.1
[2025-05-25 16:42:02] -rw-------. 1 boincer umatlas   1781760 May 25 16:42 result.tar.gz
16:42:04 (1866934): run_atlas exited; CPU time 52356.177483
16:42:04 (1866934): called boinc_finish(0)

</stderr_txt>
]]>

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