Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:02:00 (31863): wrapper (7.7.26015): starting
04:02:00 (31863): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 04:02:00] Arguments: --nthreads 8
[2025-05-25 04:02:00] Threads: 8
[2025-05-25 04:02:00] Checking for CVMFS
[2025-05-25 04:02:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 04:02:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 04:02:00] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 04:02:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 04:02:01] 2.11.2.0 5200 14116 152884 146394 0 518 16707686 18432001 19776 130560 0 81872661 99.257 121685536 50086 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 04:02:01] CVMFS is ok
[2025-05-25 04:02:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 04:02:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 04:02:01] Further information can be found at the LHC@home message board.
[2025-05-25 04:02:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 04:02:01] Checking for apptainer binary...
[2025-05-25 04:02:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 04:02:01] Running /usr/bin/apptainer --version
[2025-05-25 04:02:01] apptainer version 1.3.2-1.el7
[2025-05-25 04:02:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 04:02:09] c-212-7.aglt2.org
[2025-05-25 04:02:09] apptainer works
[2025-05-25 04:02:09] Set ATHENA_PROC_NUMBER=8
[2025-05-25 04:02:09] Set ATHENA_CORE_NUMBER=8
[2025-05-25 04:02:09] Starting ATLAS job with PandaID=6665682568
[2025-05-25 04:02:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:00:27 (74836): wrapper (7.7.26015): starting
05:00:27 (74836): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 05:00:27] Arguments: --nthreads 8
[2025-05-25 05:00:27] Threads: 8
[2025-05-25 05:00:27] This job has been restarted, cleaning up previous attempt
[2025-05-25 05:00:27] Checking for CVMFS
[2025-05-25 05:00:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 05:00:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 05:00:27] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 05:00:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 05:00:28] 2.11.2.0 5200 14175 154048 146395 2 656 16990607 18432001 19022 130560 0 82336359 99.261 121696534 49935 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 05:00:28] CVMFS is ok
[2025-05-25 05:00:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 05:00:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 05:00:28] Further information can be found at the LHC@home message board.
[2025-05-25 05:00:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 05:00:28] Checking for apptainer binary...
[2025-05-25 05:00:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 05:00:28] Running /usr/bin/apptainer --version
[2025-05-25 05:00:28] apptainer version 1.3.2-1.el7
[2025-05-25 05:00:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 05:00:30] c-212-7.aglt2.org
[2025-05-25 05:00:30] apptainer works
[2025-05-25 05:00:30] Set ATHENA_PROC_NUMBER=8
[2025-05-25 05:00:30] Set ATHENA_CORE_NUMBER=8
[2025-05-25 05:00:30] Starting ATLAS job with PandaID=6665682568
[2025-05-25 05:00:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 10:05:44]  *** The last 200 lines of the pilot log: ***
[2025-05-25 10:05:44] 2025-05-25 14:05:25,224 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6665682568/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 10:05:44] 2025-05-25 14:05:25,225 | INFO     | extracted standard info from prmon json
[2025-05-25 10:05:44] 2025-05-25 14:05:25,225 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 10:05:44] 2025-05-25 14:05:25,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 10:05:44] 2025-05-25 14:05:25,226 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 10:05:44] 2025-05-25 14:05:25,226 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 10:05:44] 2025-05-25 14:05:25,230 | INFO     | fitting pss+swap vs Time
[2025-05-25 10:05:44] 2025-05-25 14:05:25,230 | INFO     | sum of square deviations: 8288707261.7859335
[2025-05-25 10:05:44] 2025-05-25 14:05:25,232 | INFO     | sum of deviations: 78912463155.62213
[2025-05-25 10:05:44] 2025-05-25 14:05:25,233 | INFO     | mean x: 1748172784.103679
[2025-05-25 10:05:44] 2025-05-25 14:05:25,233 | INFO     | mean y: 2469549.9799331105
[2025-05-25 10:05:44] 2025-05-25 14:05:25,233 | INFO     | -- intersect: -16640972673.062077
[2025-05-25 10:05:44] 2025-05-25 14:05:25,233 | INFO     | intersect: -16640972673.062077
[2025-05-25 10:05:44] 2025-05-25 14:05:25,233 | INFO     | chi2: 1.6469668177323367
[2025-05-25 10:05:44] 2025-05-25 14:05:25,233 | INFO     | sum of square deviations: 7879806724.231301
[2025-05-25 10:05:44] 2025-05-25 14:05:25,235 | INFO     | sum of deviations: 77015124846.42175
[2025-05-25 10:05:44] 2025-05-25 14:05:25,235 | INFO     | mean x: 1748172631.6054423
[2025-05-25 10:05:44] 2025-05-25 14:05:25,235 | INFO     | mean y: 2468842.9863945576
[2025-05-25 10:05:44] 2025-05-25 14:05:25,236 | INFO     | -- intersect: -17083703215.291456
[2025-05-25 10:05:44] 2025-05-25 14:05:25,236 | INFO     | intersect: -17083703215.291456
[2025-05-25 10:05:44] 2025-05-25 14:05:25,236 | INFO     | chi2: 1.6471102746242259
[2025-05-25 10:05:44] 2025-05-25 14:05:25,236 | INFO     | current chi2=1.6471102746242259 (change=-0.008710369288844402 %)
[2025-05-25 10:05:44] 2025-05-25 14:05:25,236 | INFO     | right removable region: 293
[2025-05-25 10:05:44] 2025-05-25 14:05:25,236 | INFO     | sum of square deviations: 7879787814.231299
[2025-05-25 10:05:44] 2025-05-25 14:05:25,238 | INFO     | sum of deviations: 26950671454.238094
[2025-05-25 10:05:44] 2025-05-25 14:05:25,238 | INFO     | mean x: 1748172936.6054423
[2025-05-25 10:05:44] 2025-05-25 14:05:25,238 | INFO     | mean y: 2488806.976190476
[2025-05-25 10:05:44] 2025-05-25 14:05:25,238 | INFO     | -- intersect: -5976661338.990025
[2025-05-25 10:05:44] 2025-05-25 14:05:25,239 | INFO     | intersect: -5976661338.990025
[2025-05-25 10:05:44] 2025-05-25 14:05:25,239 | INFO     | chi2: 0.04854965508112541
[2025-05-25 10:05:44] 2025-05-25 14:05:25,239 | INFO     | current chi2=0.04854965508112541 (change=97.05217770276803 %)
[2025-05-25 10:05:44] 2025-05-25 14:05:25,239 | INFO     | sum of square deviations: 7484543041.674739
[2025-05-25 10:05:44] 2025-05-25 14:05:25,241 | INFO     | sum of deviations: 17098959210.328716
[2025-05-25 10:05:44] 2025-05-25 14:05:25,241 | INFO     | mean x: 1748173089.1072664
[2025-05-25 10:05:44] 2025-05-25 14:05:25,241 | INFO     | mean y: 2492588.7958477507
[2025-05-25 10:05:44] 2025-05-25 14:05:25,241 | INFO     | -- intersect: -3991330437.780119
[2025-05-25 10:05:44] 2025-05-25 14:05:25,241 | INFO     | intersect: -3991330437.780119
[2025-05-25 10:05:44] 2025-05-25 14:05:25,241 | INFO     | chi2: 0.0021126950033568135
[2025-05-25 10:05:44] 2025-05-25 14:05:25,241 | INFO     | current chi2=0.0021126950033568135 (change=95.64838308361502 %)
[2025-05-25 10:05:44] 2025-05-25 14:05:25,242 | INFO     | sum of square deviations: 7102740381.616223
[2025-05-25 10:05:44] 2025-05-25 14:05:25,243 | INFO     | sum of deviations: 15411512086.573954
[2025-05-25 10:05:44] 2025-05-25 14:05:25,243 | INFO     | mean x: 1748173241.609155
[2025-05-25 10:05:44] 2025-05-25 14:05:25,244 | INFO     | mean y: 2493263.9330985914
[2025-05-25 10:05:44] 2025-05-25 14:05:25,244 | INFO     | -- intersect: -3790689591.5486655
[2025-05-25 10:05:44] 2025-05-25 14:05:25,244 | INFO     | intersect: -3790689591.5486655
[2025-05-25 10:05:44] 2025-05-25 14:05:25,244 | INFO     | chi2: 0.0016393998596076645
[2025-05-25 10:05:44] 2025-05-25 14:05:25,244 | INFO     | current chi2=0.0016393998596076645 (change=22.402435893356163 %)
[2025-05-25 10:05:44] 2025-05-25 14:05:25,244 | INFO     | left removable region: 30
[2025-05-25 10:05:44] 2025-05-25 14:05:25,244 | INFO     | sum of square deviations: 5640748012.577925
[2025-05-25 10:05:44] 2025-05-25 14:05:25,246 | INFO     | sum of deviations: 10693972480.775667
[2025-05-25 10:05:44] 2025-05-25 14:05:25,246 | INFO     | mean x: 1748173516.1140685
[2025-05-25 10:05:44] 2025-05-25 14:05:25,246 | INFO     | mean y: 2494601.574144487
[2025-05-25 10:05:44] 2025-05-25 14:05:25,246 | INFO     | -- intersect: -3311767874.122012
[2025-05-25 10:05:44] 2025-05-25 14:05:25,246 | INFO     | intersect: -3311767874.122012
[2025-05-25 10:05:44] 2025-05-25 14:05:25,246 | INFO     | chi2: 0.0010720853806440338
[2025-05-25 10:05:44] 2025-05-25 14:05:25,246 | INFO     | -- intersect: -3311767874.122012
[2025-05-25 10:05:44] 2025-05-25 14:05:25,246 | INFO     | current memory leak: 1.90 B/s (using 263 data points, chi2=0.00)
[2025-05-25 10:05:44] 2025-05-25 14:05:25,247 | INFO     | ..............................
[2025-05-25 10:05:44] 2025-05-25 14:05:25,247 | INFO     | . Timing measurements:
[2025-05-25 10:05:44] 2025-05-25 14:05:25,247 | INFO     | . get job = 0 s
[2025-05-25 10:05:44] 2025-05-25 14:05:25,247 | INFO     | . initial setup = 1 s
[2025-05-25 10:05:44] 2025-05-25 14:05:25,247 | INFO     | . payload setup = 13 s
[2025-05-25 10:05:44] 2025-05-25 14:05:25,247 | INFO     | . stage-in = 0 s
[2025-05-25 10:05:44] 2025-05-25 14:05:25,247 | INFO     | . payload execution = 18228 s
[2025-05-25 10:05:44] 2025-05-25 14:05:25,247 | INFO     | . stage-out = 2 s
[2025-05-25 10:05:44] 2025-05-25 14:05:25,247 | INFO     | . log creation = 0 s
[2025-05-25 10:05:44] 2025-05-25 14:05:25,247 | INFO     | ..............................
[2025-05-25 10:05:44] 2025-05-25 14:05:25,322 | INFO     | 
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | job summary report
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | --------------------------------------------------
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | PanDA job id: 6665682568
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | task id: 44871837
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | errors: (none)
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | pilot state: finished 
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | transexitcode: 0
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | exeerrorcode: 0
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | exeerrordiag: 
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | exitcode: 0
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | exitmsg: OK
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | cpuconsumptiontime: 46457 s
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | nevents: 400
[2025-05-25 10:05:44] 2025-05-25 14:05:25,323 | INFO     | neventsw: 0
[2025-05-25 10:05:44] 2025-05-25 14:05:25,324 | INFO     | pid: 44597
[2025-05-25 10:05:44] 2025-05-25 14:05:25,324 | INFO     | pgrp: 44597
[2025-05-25 10:05:44] 2025-05-25 14:05:25,324 | INFO     | corecount: 8
[2025-05-25 10:05:44] 2025-05-25 14:05:25,324 | INFO     | event service: False
[2025-05-25 10:05:44] 2025-05-25 14:05:25,324 | INFO     | sizes: {0: 2393519, 1: 2393718, 8: 2393924, 12: 2393952, 18246: 2426260, 18249: 2435201, 18251: 2435385, 18261: 2435555}
[2025-05-25 10:05:44] 2025-05-25 14:05:25,324 | INFO     | --------------------------------------------------
[2025-05-25 10:05:44] 2025-05-25 14:05:25,324 | INFO     | 
[2025-05-25 10:05:44] 2025-05-25 14:05:25,324 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-05-25 10:05:44] 2025-05-25 14:05:25,341 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 10:05:44] 2025-05-25 14:05:25,342 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,343 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 10:05:44] 2025-05-25 14:05:25,343 | INFO     | job 6665682568 has completed (purged errors)
[2025-05-25 10:05:44] 2025-05-25 14:05:25,343 | INFO     | overall cleanup function is called
[2025-05-25 10:05:44] 2025-05-25 14:05:26,350 | INFO     | --- collectZombieJob: --- 10, [44597]
[2025-05-25 10:05:44] 2025-05-25 14:05:26,350 | INFO     | zombie collector waiting for pid 44597
[2025-05-25 10:05:44] 2025-05-25 14:05:26,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 10:05:44] 2025-05-25 14:05:26,351 | INFO     | collected zombie processes
[2025-05-25 10:05:44] 2025-05-25 14:05:26,351 | INFO     | will attempt to kill all subprocesses of pid=44597
[2025-05-25 10:05:44] 2025-05-25 14:05:26,629 | INFO     | process IDs to be killed: [44597] (in reverse order)
[2025-05-25 10:05:44] 2025-05-25 14:05:26,741 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 10:05:44] 2025-05-25 14:05:26,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 10:05:44] 2025-05-25 14:05:26,755 | INFO     | did not find any defunct processes belonging to 44597
[2025-05-25 10:05:44] 2025-05-25 14:05:26,768 | INFO     | did not find any defunct processes belonging to 44597
[2025-05-25 10:05:44] 2025-05-25 14:05:26,768 | INFO     | ready for new job
[2025-05-25 10:05:44] 2025-05-25 14:05:26,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 10:05:44] 2025-05-25 14:05:26,770 | INFO     | **************************************
[2025-05-25 10:05:44] 2025-05-25 14:05:26,770 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 10:05:44] 2025-05-25 14:05:26,771 | INFO     | **************************************
[2025-05-25 10:05:44] 2025-05-25 14:05:26,771 | INFO     | 
[2025-05-25 10:05:44] 2025-05-25 14:05:26,775 | INFO     | architecture information:
[2025-05-25 10:05:44] 2025-05-25 14:05:26,776 | INFO     | executing command: cat /etc/os-release
[2025-05-25 10:05:44] 2025-05-25 14:05:26,820 | INFO     | cat /etc/os-release:
[2025-05-25 10:05:44] NAME="CentOS Linux"
[2025-05-25 10:05:44] VERSION="7 (Core)"
[2025-05-25 10:05:44] ID="centos"
[2025-05-25 10:05:44] ID_LIKE="rhel fedora"
[2025-05-25 10:05:44] VERSION_ID="7"
[2025-05-25 10:05:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 10:05:44] ANSI_COLOR="0;31"
[2025-05-25 10:05:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 10:05:44] HOME_URL="https://www.centos.org/"
[2025-05-25 10:05:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 10:05:44] 
[2025-05-25 10:05:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 10:05:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 10:05:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 10:05:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 10:05:44] 
[2025-05-25 10:05:44] 2025-05-25 14:05:26,821 | INFO     | **************************************
[2025-05-25 10:05:44] 2025-05-25 14:05:27,323 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-05-25 10:05:44] 2025-05-25 14:05:27,429 | INFO     | sufficient remaining disk space (102272860160 B)
[2025-05-25 10:05:44] 2025-05-25 14:05:27,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 10:05:44] 2025-05-25 14:05:27,429 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 10:05:44] 2025-05-25 14:05:27,429 | INFO     | update_server=False
[2025-05-25 10:05:44] 2025-05-25 14:05:27,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 10:05:44] 2025-05-25 14:05:27,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 10:05:44] 2025-05-25 14:05:27,486 | INFO     | all job control threads have been joined
[2025-05-25 10:05:44] 2025-05-25 14:05:27,678 | INFO     | all data control threads have been joined
[2025-05-25 10:05:44] 2025-05-25 14:05:27,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 10:05:44] 2025-05-25 14:05:27,845 | INFO     | aborting loop
[2025-05-25 10:05:44] 2025-05-25 14:05:28,377 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 10:05:44] 2025-05-25 14:05:28,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 10:05:44] 2025-05-25 14:05:28,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 10:05:44] 2025-05-25 14:05:28,430 | INFO     | [job] retrieve thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:28,491 | INFO     | [job] control thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:28,616 | INFO     | [payload] failed_post thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:28,684 | INFO     | [data] control thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:28,697 | INFO     | all payload control threads have been joined
[2025-05-25 10:05:44] 2025-05-25 14:05:28,851 | INFO     | [job] job monitor thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:28,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 10:05:44] 2025-05-25 14:05:28,882 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:28,912 | INFO     | [job] validate thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:29,392 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:29,414 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:29,478 | INFO     | [payload] validate_post thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:29,561 | INFO     | [data] copytool_in thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:29,703 | INFO     | [payload] control thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:30,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 10:05:44] 2025-05-25 14:05:30,865 | INFO     | [data] copytool_out thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:31,341 | INFO     | [job] queue monitor thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:31,436 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:38,018 | INFO     | job.realtimelogging is not enabled
[2025-05-25 10:05:44] 2025-05-25 14:05:39,023 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 10:05:44] 2025-05-25 14:05:39,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831383033664)>', '<ExcThread(monitor, started 139830553986816)>']
[2025-05-25 10:05:44] 2025-05-25 14:05:39,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 10:05:44] 2025-05-25 14:05:39,435 | INFO     | [monitor] control thread has ended
[2025-05-25 10:05:44] 2025-05-25 14:05:44,279 | INFO     | all workflow threads have been joined
[2025-05-25 10:05:44] 2025-05-25 14:05:44,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 10:05:44] 2025-05-25 14:05:44,280 | INFO     | traces error code: 0
[2025-05-25 10:05:44] 2025-05-25 14:05:44,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 10:05:44] 2025-05-25 14:05:44,457 [wrapper] ==== pilot stdout END ====
[2025-05-25 10:05:44] 2025-05-25 14:05:44,462 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 10:05:44] 2025-05-25 14:05:44,464 [wrapper] pilotpid: 96279
[2025-05-25 10:05:44] 2025-05-25 14:05:44,466 [wrapper] Pilot exit status: 0
[2025-05-25 10:05:44] 2025-05-25 14:05:44,491 [wrapper] pandaids: 6665682568 6665682568
[2025-05-25 10:05:44] 2025-05-25 14:05:44,584 [wrapper] cleanup supervisor_pilot 33783 96281
[2025-05-25 10:05:44] 2025-05-25 14:05:44,587 [wrapper] Test setup, not cleaning
[2025-05-25 10:05:44] 2025-05-25 14:05:44,621 [wrapper] apfmon messages muted
[2025-05-25 10:05:44] 2025-05-25 14:05:44,624 [wrapper] ==== wrapper stdout END ====
[2025-05-25 10:05:44] 2025-05-25 14:05:44,627 [wrapper] ==== wrapper stderr END ====
[2025-05-25 10:05:44]  *** Error codes and diagnostics ***
[2025-05-25 10:05:44]     "exeErrorCode": 0,
[2025-05-25 10:05:44]     "exeErrorDiag": "",
[2025-05-25 10:05:44]     "pilotErrorCode": 0,
[2025-05-25 10:05:44]     "pilotErrorDiag": "",
[2025-05-25 10:05:44]  *** Listing of results directory ***
[2025-05-25 10:05:44] total 647116
[2025-05-25 10:05:44] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas    495897 May 24 18:42 pilot3.tar.gz
[2025-05-25 10:05:44] -rwx------ 1 boincer umatlas     37140 May 24 18:56 runpilot2-wrapper.sh
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas      5111 May 24 18:56 queuedata.json
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas       100 May 25 04:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 10:05:44] -rwxr-xr-x 1 boincer umatlas      7986 May 25 04:01 run_atlas
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas       105 May 25 04:01 job.xml
[2025-05-25 10:05:44] -rw-r--r-- 3 boincer umatlas 225843554 May 25 04:02 EVNT.44871834._001013.pool.root.1
[2025-05-25 10:05:44] -rw-r--r-- 3 boincer umatlas 225843554 May 25 04:02 ATLAS.root_0
[2025-05-25 10:05:44] -rw-r--r-- 2 boincer umatlas     15093 May 25 04:02 start_atlas.sh
[2025-05-25 10:05:44] drwxrwx--x 2 boincer umatlas      4096 May 25 04:02 shared
[2025-05-25 10:05:44] -rw-r--r-- 2 boincer umatlas    508877 May 25 04:02 input.tar.gz
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas         0 May 25 04:02 boinc_lockfile
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas      2558 May 25 05:00 pandaJob.out
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas    990811 May 25 05:00 agis_schedconf.cvmfs.json
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas      6387 May 25 10:01 init_data.xml
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas        95 May 25 10:04 pilot_heartbeat.json
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas 203151463 May 25 10:04 HITS.44871837._025414.pool.root.1
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas       531 May 25 10:04 boinc_task_state.xml
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas      1075 May 25 10:05 memory_monitor_summary.json
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas   1596740 May 25 10:05 agis_ddmendpoints.agis.ALL.json
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas    439905 May 25 10:05 log.44871837._025414.job.log.tgz.1
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas      7741 May 25 10:05 heartbeat.json
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas        28 May 25 10:05 wrapper_checkpoint.txt
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas      8192 May 25 10:05 boinc_mmap_file
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas      4426 May 25 10:05 pilotlog.txt
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas   1549379 May 25 10:05 log.44871837._025414.job.log.1
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas       357 May 25 10:05 output.list
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas       620 May 25 10:05 runtime_log
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas   2007040 May 25 10:05 result.tar.gz
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas       786 May 25 10:05 XoHMDmQyCd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9mSKDmh3iUTm.diag
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas      8740 May 25 10:05 runtime_log.err
[2025-05-25 10:05:44] -rw-r--r-- 1 boincer umatlas     23055 May 25 10:05 stderr.txt
[2025-05-25 10:05:44] HITS file was successfully produced:
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas 203151463 May 25 10:04 shared/HITS.pool.root.1
[2025-05-25 10:05:44]  *** Contents of shared directory: ***
[2025-05-25 10:05:44] total 421424
[2025-05-25 10:05:44] -rw-r--r-- 3 boincer umatlas 225843554 May 25 04:02 ATLAS.root_0
[2025-05-25 10:05:44] -rw-r--r-- 2 boincer umatlas     15093 May 25 04:02 start_atlas.sh
[2025-05-25 10:05:44] -rw-r--r-- 2 boincer umatlas    508877 May 25 04:02 input.tar.gz
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas 203151463 May 25 10:04 HITS.pool.root.1
[2025-05-25 10:05:44] -rw------- 1 boincer umatlas   2007040 May 25 10:05 result.tar.gz
10:05:46 (74836): run_atlas exited; CPU time 46003.074365
10:05:46 (74836): called boinc_finish(0)

</stderr_txt>
]]>

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