Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:34:14 (21661): wrapper (7.7.26015): starting
03:34:14 (21661): wrapper: running run_atlas (--nthreads 12)
[2025-05-25 03:34:14] Arguments: --nthreads 12
[2025-05-25 03:34:14] Threads: 12
[2025-05-25 03:34:14] Checking for CVMFS
[2025-05-25 03:34:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 03:34:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 03:34:15] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 03:34:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 03:34:15] 2.11.2.0 2925 20988 82072 146394 1 56 15037366 20275201 1 130560 0 6421975 99.978 3533653 10299 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 03:34:15] CVMFS is ok
[2025-05-25 03:34:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 03:34:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 03:34:15] Further information can be found at the LHC@home message board.
[2025-05-25 03:34:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 03:34:15] Checking for apptainer binary...
[2025-05-25 03:34:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 03:34:15] Running /usr/bin/apptainer --version
[2025-05-25 03:34:15] apptainer version 1.3.2-1.el7
[2025-05-25 03:34:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 03:34:16] c-205-10.aglt2.org
[2025-05-25 03:34:16] apptainer works
[2025-05-25 03:34:16] Set ATHENA_PROC_NUMBER=12
[2025-05-25 03:34:16] Set ATHENA_CORE_NUMBER=12
[2025-05-25 03:34:16] Starting ATLAS job with PandaID=6665681775
[2025-05-25 03:34:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 05:11:21]  *** The last 200 lines of the pilot log: ***
[2025-05-25 05:11:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-25 05:11:21]  replicas=None
[2025-05-25 05:11:21]  scope=mc23_13p6TeV
[2025-05-25 05:11:21]  status=None
[2025-05-25 05:11:21]  status_code=0
[2025-05-25 05:11:21]  storage_token=
[2025-05-25 05:11:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6665681775/log.44871837._025066.job.log.tgz.1
[2025-05-25 05:11:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/fb/log.44871837._025066.job.log.tgz.1
[2025-05-25 05:11:21]  workdir=None
[2025-05-25 05:11:21] ]
[2025-05-25 05:11:21] 2025-05-25 09:10:51,548 | INFO     | transferring file log.44871837._025066.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6665681775/log.44871837._025066.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-25 05:11:21] 2025-05-25 09:10:51,548 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6665681775/log.44871837._025066.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._025066.job
[2025-05-25 05:11:21] 2025-05-25 09:10:51,570 | INFO     | adding to output.list: log.44871837._025066.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/fb/log.44871837._025066.job.log.tg
[2025-05-25 05:11:21] 2025-05-25 09:10:51,571 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-25 05:11:21] 2025-05-25 09:10:51,571 | INFO     | summary of transferred files:
[2025-05-25 05:11:21] 2025-05-25 09:10:51,572 | INFO     |  -- lfn=log.44871837._025066.job.log.tgz.1, status_code=0, status=transferred
[2025-05-25 05:11:21] 2025-05-25 09:10:51,572 | INFO     | stage-out finished correctly
[2025-05-25 05:11:21] 2025-05-25 09:10:53,379 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-25 05:11:21] 2025-05-25 09:10:55,680 | INFO     | job 6665681775 has state=finished
[2025-05-25 05:11:21] 2025-05-25 09:10:55,681 | INFO     | preparing for final server update for job 6665681775 in state='finished'
[2025-05-25 05:11:21] 2025-05-25 09:10:55,747 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-05-25 05:11:21] 2025-05-25 09:10:55,747 | INFO     | this job has now completed (state=finished)
[2025-05-25 05:11:21] 2025-05-25 09:10:55,747 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 05:11:21] 2025-05-25 09:10:55,748 | INFO     | log transfer has been attempted: DONE
[2025-05-25 05:11:21] 2025-05-25 09:10:55,748 | INFO     | job 6665681775 has finished - writing final server update
[2025-05-25 05:11:21] 2025-05-25 09:10:55,748 | INFO     | total number of processed events: 400 (read)
[2025-05-25 05:11:21] 2025-05-25 09:10:55,749 | INFO     | executing command: lscpu
[2025-05-25 05:11:21] 2025-05-25 09:10:55,776 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 05:11:21] 2025-05-25 09:10:56,099 | WARNING  | process 31680 can no longer be monitored (due to stat problems) - aborting
[2025-05-25 05:11:21] 2025-05-25 09:10:56,099 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665681775/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 05:11:21] 2025-05-25 09:10:56,186 | INFO     | number of running child processes to parent process 31680: 1
[2025-05-25 05:11:21] 2025-05-25 09:10:56,186 | INFO     | maximum number of monitored processes: 6
[2025-05-25 05:11:21] 2025-05-25 09:10:58,689 | INFO     | monitor loop #432: job 0:6665681775 is in state 'finished'
[2025-05-25 05:11:21] 2025-05-25 09:10:58,689 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:11:21] 2025-05-25 09:11:01,193 | INFO     | monitor loop #433: job 0:6665681775 is in state 'finished'
[2025-05-25 05:11:21] 2025-05-25 09:11:01,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:11:21] 2025-05-25 09:11:01,390 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-25 05:11:21] 2025-05-25 09:11:01,391 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665681775/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 05:11:21] 2025-05-25 09:11:01,392 | INFO     | extracted standard info from prmon json
[2025-05-25 05:11:21] 2025-05-25 09:11:01,392 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 05:11:21] 2025-05-25 09:11:01,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 05:11:21] 2025-05-25 09:11:01,392 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 05:11:21] 2025-05-25 09:11:01,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 05:11:21] 2025-05-25 09:11:01,395 | INFO     | fitting pss+swap vs Time
[2025-05-25 05:11:21] 2025-05-25 09:11:01,396 | INFO     | sum of square deviations: 211285822.0
[2025-05-25 05:11:21] 2025-05-25 09:11:01,397 | INFO     | sum of deviations: -11714823629.000002
[2025-05-25 05:11:21] 2025-05-25 09:11:01,397 | INFO     | mean x: 1748161459.5
[2025-05-25 05:11:21] 2025-05-25 09:11:01,397 | INFO     | mean y: 2803023.6136363638
[2025-05-25 05:11:21] 2025-05-25 09:11:01,397 | INFO     | -- intersect: 96930287221.09912
[2025-05-25 05:11:21] 2025-05-25 09:11:01,397 | INFO     | intersect: 96930287221.09912
[2025-05-25 05:11:21] 2025-05-25 09:11:01,397 | INFO     | chi2: 0.14746494831173274
[2025-05-25 05:11:21] 2025-05-25 09:11:01,397 | INFO     | -- intersect: 96930287221.09912
[2025-05-25 05:11:21] 2025-05-25 09:11:01,398 | INFO     | current memory leak: -55.45 B/s (using 88 data points, chi2=0.15)
[2025-05-25 05:11:21] 2025-05-25 09:11:01,398 | INFO     | ..............................
[2025-05-25 05:11:21] 2025-05-25 09:11:01,398 | INFO     | . Timing measurements:
[2025-05-25 05:11:21] 2025-05-25 09:11:01,398 | INFO     | . get job = 0 s
[2025-05-25 05:11:21] 2025-05-25 09:11:01,398 | INFO     | . initial setup = 2 s
[2025-05-25 05:11:21] 2025-05-25 09:11:01,398 | INFO     | . payload setup = 9 s
[2025-05-25 05:11:21] 2025-05-25 09:11:01,398 | INFO     | . stage-in = 0 s
[2025-05-25 05:11:21] 2025-05-25 09:11:01,399 | INFO     | . payload execution = 5751 s
[2025-05-25 05:11:21] 2025-05-25 09:11:01,399 | INFO     | . stage-out = 0 s
[2025-05-25 05:11:21] 2025-05-25 09:11:01,399 | INFO     | . log creation = 0 s
[2025-05-25 05:11:21] 2025-05-25 09:11:01,399 | INFO     | ..............................
[2025-05-25 05:11:21] 2025-05-25 09:11:01,483 | INFO     | 
[2025-05-25 05:11:21] 2025-05-25 09:11:01,483 | INFO     | job summary report
[2025-05-25 05:11:21] 2025-05-25 09:11:01,483 | INFO     | --------------------------------------------------
[2025-05-25 05:11:21] 2025-05-25 09:11:01,484 | INFO     | PanDA job id: 6665681775
[2025-05-25 05:11:21] 2025-05-25 09:11:01,484 | INFO     | task id: 44871837
[2025-05-25 05:11:21] 2025-05-25 09:11:01,484 | INFO     | errors: (none)
[2025-05-25 05:11:21] 2025-05-25 09:11:01,484 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 05:11:21] 2025-05-25 09:11:01,484 | INFO     | pilot state: finished 
[2025-05-25 05:11:21] 2025-05-25 09:11:01,484 | INFO     | transexitcode: 0
[2025-05-25 05:11:21] 2025-05-25 09:11:01,484 | INFO     | exeerrorcode: 0
[2025-05-25 05:11:21] 2025-05-25 09:11:01,485 | INFO     | exeerrordiag: 
[2025-05-25 05:11:21] 2025-05-25 09:11:01,485 | INFO     | exitcode: 0
[2025-05-25 05:11:21] 2025-05-25 09:11:01,485 | INFO     | exitmsg: OK
[2025-05-25 05:11:21] 2025-05-25 09:11:01,485 | INFO     | cpuconsumptiontime: 59555 s
[2025-05-25 05:11:21] 2025-05-25 09:11:01,485 | INFO     | nevents: 400
[2025-05-25 05:11:21] 2025-05-25 09:11:01,485 | INFO     | neventsw: 0
[2025-05-25 05:11:21] 2025-05-25 09:11:01,486 | INFO     | pid: 31680
[2025-05-25 05:11:21] 2025-05-25 09:11:01,486 | INFO     | pgrp: 31680
[2025-05-25 05:11:21] 2025-05-25 09:11:01,486 | INFO     | corecount: 12
[2025-05-25 05:11:21] 2025-05-25 09:11:01,486 | INFO     | event service: False
[2025-05-25 05:11:21] 2025-05-25 09:11:01,486 | INFO     | sizes: {0: 2393568, 1: 2393767, 6: 2393973, 11: 2394001, 5764: 2420501, 5765: 2420500, 5766: 2429625, 5768: 2429681, 5776: 2429851}
[2025-05-25 05:11:21] 2025-05-25 09:11:01,486 | INFO     | --------------------------------------------------
[2025-05-25 05:11:21] 2025-05-25 09:11:01,486 | INFO     | 
[2025-05-25 05:11:21] 2025-05-25 09:11:01,487 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-25 05:11:21] 2025-05-25 09:11:01,510 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,511 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,511 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,512 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,513 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 05:11:21] 2025-05-25 09:11:01,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 05:11:21] 2025-05-25 09:11:01,514 | INFO     | job 6665681775 has completed (purged errors)
[2025-05-25 05:11:21] 2025-05-25 09:11:01,514 | INFO     | overall cleanup function is called
[2025-05-25 05:11:21] 2025-05-25 09:11:02,522 | INFO     | --- collectZombieJob: --- 10, [31680]
[2025-05-25 05:11:21] 2025-05-25 09:11:02,522 | INFO     | zombie collector waiting for pid 31680
[2025-05-25 05:11:21] 2025-05-25 09:11:02,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 05:11:21] 2025-05-25 09:11:02,523 | INFO     | collected zombie processes
[2025-05-25 05:11:21] 2025-05-25 09:11:02,523 | INFO     | will attempt to kill all subprocesses of pid=31680
[2025-05-25 05:11:21] 2025-05-25 09:11:02,627 | INFO     | process IDs to be killed: [31680] (in reverse order)
[2025-05-25 05:11:21] 2025-05-25 09:11:02,675 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 05:11:21] 2025-05-25 09:11:02,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 05:11:21] 2025-05-25 09:11:02,678 | INFO     | did not find any defunct processes belonging to 31680
[2025-05-25 05:11:21] 2025-05-25 09:11:02,680 | INFO     | did not find any defunct processes belonging to 31680
[2025-05-25 05:11:21] 2025-05-25 09:11:02,680 | INFO     | ready for new job
[2025-05-25 05:11:21] 2025-05-25 09:11:02,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 05:11:21] 2025-05-25 09:11:02,681 | INFO     | **************************************
[2025-05-25 05:11:21] 2025-05-25 09:11:02,681 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 05:11:21] 2025-05-25 09:11:02,681 | INFO     | **************************************
[2025-05-25 05:11:21] 2025-05-25 09:11:02,682 | INFO     | 
[2025-05-25 05:11:21] 2025-05-25 09:11:02,682 | INFO     | architecture information:
[2025-05-25 05:11:21] 2025-05-25 09:11:02,683 | INFO     | executing command: cat /etc/os-release
[2025-05-25 05:11:21] 2025-05-25 09:11:02,697 | INFO     | cat /etc/os-release:
[2025-05-25 05:11:21] NAME="CentOS Linux"
[2025-05-25 05:11:21] VERSION="7 (Core)"
[2025-05-25 05:11:21] ID="centos"
[2025-05-25 05:11:21] ID_LIKE="rhel fedora"
[2025-05-25 05:11:21] VERSION_ID="7"
[2025-05-25 05:11:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 05:11:21] ANSI_COLOR="0;31"
[2025-05-25 05:11:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 05:11:21] HOME_URL="https://www.centos.org/"
[2025-05-25 05:11:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 05:11:21] 
[2025-05-25 05:11:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 05:11:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 05:11:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 05:11:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 05:11:21] 
[2025-05-25 05:11:21] 2025-05-25 09:11:02,697 | INFO     | **************************************
[2025-05-25 05:11:21] 2025-05-25 09:11:03,010 | INFO     | PID=25272 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-25 05:11:21] 2025-05-25 09:11:03,200 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-25 05:11:21] 2025-05-25 09:11:03,217 | INFO     | sufficient remaining disk space (29393682432 B)
[2025-05-25 05:11:21] 2025-05-25 09:11:03,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 05:11:21] 2025-05-25 09:11:03,217 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 05:11:21] 2025-05-25 09:11:03,218 | INFO     | update_server=False
[2025-05-25 05:11:21] 2025-05-25 09:11:03,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 05:11:21] 2025-05-25 09:11:03,218 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 05:11:21] 2025-05-25 09:11:03,218 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 05:11:21] 2025-05-25 09:11:03,219 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 05:11:21] 2025-05-25 09:11:03,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 05:11:21] 2025-05-25 09:11:03,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 05:11:21] 2025-05-25 09:11:03,606 | INFO     | all payload control threads have been joined
[2025-05-25 05:11:21] 2025-05-25 09:11:03,696 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 05:11:21] 2025-05-25 09:11:03,696 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 05:11:21] 2025-05-25 09:11:03,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 05:11:21] 2025-05-25 09:11:03,696 | INFO     | will abort loop
[2025-05-25 05:11:21] 2025-05-25 09:11:03,845 | INFO     | all job control threads have been joined
[2025-05-25 05:11:21] 2025-05-25 09:11:03,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 05:11:21] 2025-05-25 09:11:04,164 | INFO     | all data control threads have been joined
[2025-05-25 05:11:21] 2025-05-25 09:11:04,223 | INFO     | [job] retrieve thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:04,224 | INFO     | [job] queue monitor thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:04,515 | INFO     | [data] copytool_in thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:04,578 | INFO     | [payload] validate_post thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:04,611 | INFO     | [payload] control thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:04,673 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 05:11:21] 2025-05-25 09:11:04,702 | INFO     | [job] job monitor thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:04,851 | INFO     | [job] control thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:04,889 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:05,170 | INFO     | [data] control thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:05,320 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:05,463 | INFO     | [job] validate thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:05,639 | INFO     | [payload] failed_post thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:05,697 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:06,679 | INFO     | [data] copytool_out thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:07,984 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:14,156 | INFO     | job.realtimelogging is not enabled
[2025-05-25 05:11:21] 2025-05-25 09:11:15,162 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 05:11:21] 2025-05-25 09:11:16,178 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128558966592)>', '<ExcThread(monitor, started 140127594604288)>']
[2025-05-25 05:11:21] 2025-05-25 09:11:16,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 05:11:21] 2025-05-25 09:11:16,286 | INFO     | [monitor] control thread has ended
[2025-05-25 05:11:21] 2025-05-25 09:11:21,187 | INFO     | all workflow threads have been joined
[2025-05-25 05:11:21] 2025-05-25 09:11:21,187 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 05:11:21] 2025-05-25 09:11:21,187 | INFO     | traces error code: 0
[2025-05-25 05:11:21] 2025-05-25 09:11:21,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 05:11:21] 2025-05-25 09:11:21,282 [wrapper] ==== pilot stdout END ====
[2025-05-25 05:11:21] 2025-05-25 09:11:21,286 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 05:11:21] 2025-05-25 09:11:21,290 [wrapper] pilotpid: 25272
[2025-05-25 05:11:21] 2025-05-25 09:11:21,294 [wrapper] Pilot exit status: 0
[2025-05-25 05:11:21] 2025-05-25 09:11:21,310 [wrapper] pandaids: 6665681775
[2025-05-25 05:11:21] 2025-05-25 09:11:21,352 [wrapper] cleanup supervisor_pilot 22894 25273
[2025-05-25 05:11:21] 2025-05-25 09:11:21,357 [wrapper] Test setup, not cleaning
[2025-05-25 05:11:21] 2025-05-25 09:11:21,362 [wrapper] apfmon messages muted
[2025-05-25 05:11:21] 2025-05-25 09:11:21,366 [wrapper] ==== wrapper stdout END ====
[2025-05-25 05:11:21] 2025-05-25 09:11:21,370 [wrapper] ==== wrapper stderr END ====
[2025-05-25 05:11:21]  *** Error codes and diagnostics ***
[2025-05-25 05:11:21]     "exeErrorCode": 0,
[2025-05-25 05:11:21]     "exeErrorDiag": "",
[2025-05-25 05:11:21]     "pilotErrorCode": 0,
[2025-05-25 05:11:21]     "pilotErrorDiag": "",
[2025-05-25 05:11:21]  *** Listing of results directory ***
[2025-05-25 05:11:21] total 411824
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas    495897 May 24 18:30 pilot3.tar.gz
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas      5111 May 24 18:35 queuedata.json
[2025-05-25 05:11:21] -rwx------ 1 boincer umatlas     37140 May 24 18:35 runpilot2-wrapper.sh
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas       100 May 25 03:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 05:11:21] -rwxr-xr-x 1 boincer umatlas      7986 May 25 03:34 run_atlas
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas       105 May 25 03:34 job.xml
[2025-05-25 05:11:21] -rw-r--r-- 2 boincer umatlas 222553368 May 25 03:34 EVNT.44871834._000999.pool.root.1
[2025-05-25 05:11:21] -rw-r--r-- 2 boincer umatlas     15093 May 25 03:34 start_atlas.sh
[2025-05-25 05:11:21] drwxrwx--x 2 boincer umatlas      4096 May 25 03:34 shared
[2025-05-25 05:11:21] -rw-r--r-- 2 boincer umatlas    508876 May 25 03:34 input.tar.gz
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas         0 May 25 03:34 boinc_lockfile
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas      2558 May 25 03:34 pandaJob.out
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas    990811 May 25 03:34 agis_schedconf.cvmfs.json
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas   1596740 May 25 03:34 agis_ddmendpoints.agis.ALL.json
[2025-05-25 05:11:21] drwx------ 4 boincer umatlas      4096 May 25 03:34 pilot3
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas      5867 May 25 05:10 init_data.xml
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas 193472585 May 25 05:10 HITS.44871837._025066.pool.root.1
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas        95 May 25 05:10 pilot_heartbeat.json
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas      1048 May 25 05:10 memory_monitor_summary.json
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas    384044 May 25 05:10 log.44871837._025066.job.log.tgz.1
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas        27 May 25 05:10 wrapper_checkpoint.txt
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas      8192 May 25 05:10 boinc_mmap_file
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas       529 May 25 05:10 boinc_task_state.xml
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas      7753 May 25 05:11 heartbeat.json
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas      5051 May 25 05:11 pilotlog.txt
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas    542135 May 25 05:11 log.44871837._025066.job.log.1
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas       357 May 25 05:11 output.list
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas       620 May 25 05:11 runtime_log
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas    942080 May 25 05:11 result.tar.gz
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas       659 May 25 05:11 xhgNDmZdCd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmckSKDmdETv8m.diag
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas      8661 May 25 05:11 runtime_log.err
[2025-05-25 05:11:21] -rw-r--r-- 1 boincer umatlas     21908 May 25 05:11 stderr.txt
[2025-05-25 05:11:21] HITS file was successfully produced:
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas 193472585 May 25 05:10 shared/HITS.pool.root.1
[2025-05-25 05:11:21]  *** Contents of shared directory: ***
[2025-05-25 05:11:21] total 407724
[2025-05-25 05:11:21] -rw-r--r-- 2 boincer umatlas 222553368 May 25 03:34 ATLAS.root_0
[2025-05-25 05:11:21] -rw-r--r-- 2 boincer umatlas     15093 May 25 03:34 start_atlas.sh
[2025-05-25 05:11:21] -rw-r--r-- 2 boincer umatlas    508876 May 25 03:34 input.tar.gz
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas 193472585 May 25 05:10 HITS.pool.root.1
[2025-05-25 05:11:21] -rw------- 1 boincer umatlas    942080 May 25 05:11 result.tar.gz
05:11:23 (21661): run_atlas exited; CPU time 59450.577689
05:11:23 (21661): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN