Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:55:47 (702388): wrapper (7.7.26015): starting
02:55:47 (702388): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 02:55:47] Arguments: --nthreads 8
[2025-05-25 02:55:47] Threads: 8
[2025-05-25 02:55:47] Checking for CVMFS
[2025-05-25 02:55:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 02:55:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 02:55:48] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 02:55:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 02:55:49] 2.12.6.0 383503 8776 346548 146393 2 326 21741003 32935937 39750 16776704 0 69429333 99.617 69914274 21959 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 02:55:49] CVMFS is ok
[2025-05-25 02:55:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 02:55:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 02:55:49] Further information can be found at the LHC@home message board.
[2025-05-25 02:55:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 02:55:49] Checking for apptainer binary...
[2025-05-25 02:55:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 02:55:49] Running /usr/bin/apptainer --version
[2025-05-25 02:55:49] apptainer version 1.4.1-1.el9
[2025-05-25 02:55:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 02:55:50] c7-2-14.aglt2.org
[2025-05-25 02:55:50] apptainer works
[2025-05-25 02:55:50] Set ATHENA_PROC_NUMBER=8
[2025-05-25 02:55:50] Set ATHENA_CORE_NUMBER=8
[2025-05-25 02:55:50] Starting ATLAS job with PandaID=6665681094
[2025-05-25 02:55:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 13:03:51]  *** The last 200 lines of the pilot log: ***
[2025-05-25 13:03:51] 2025-05-25 17:03:28,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 13:03:51] 2025-05-25 17:03:28,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 13:03:51] 2025-05-25 17:03:28,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 13:03:51] 2025-05-25 17:03:28,216 | INFO     | fitting pss+swap vs Time
[2025-05-25 13:03:51] 2025-05-25 17:03:28,217 | INFO     | sum of square deviations: 64985517484.21508
[2025-05-25 13:03:51] 2025-05-25 17:03:28,244 | INFO     | sum of deviations: 764651348277.2491
[2025-05-25 13:03:51] 2025-05-25 17:03:28,268 | INFO     | mean x: 1748174461.885522
[2025-05-25 13:03:51] 2025-05-25 17:03:28,268 | INFO     | mean y: 2114772.18013468
[2025-05-25 13:03:51] 2025-05-25 17:03:28,268 | INFO     | -- intersect: -20567760040.762806
[2025-05-25 13:03:51] 2025-05-25 17:03:28,268 | INFO     | intersect: -20567760040.762806
[2025-05-25 13:03:51] 2025-05-25 17:03:28,269 | INFO     | chi2: 10.619444983012462
[2025-05-25 13:03:51] 2025-05-25 17:03:28,269 | INFO     | sum of square deviations: 63358199895.74176
[2025-05-25 13:03:51] 2025-05-25 17:03:28,293 | INFO     | sum of deviations: 820127473914.3873
[2025-05-25 13:03:51] 2025-05-25 17:03:28,314 | INFO     | mean x: 1748174309.387097
[2025-05-25 13:03:51] 2025-05-25 17:03:28,314 | INFO     | mean y: 2119938.893039049
[2025-05-25 13:03:51] 2025-05-25 17:03:28,314 | INFO     | -- intersect: -22626770760.00492
[2025-05-25 13:03:51] 2025-05-25 17:03:28,314 | INFO     | intersect: -22626770760.00492
[2025-05-25 13:03:51] 2025-05-25 17:03:28,315 | INFO     | chi2: 9.264496908604166
[2025-05-25 13:03:51] 2025-05-25 17:03:28,315 | INFO     | current chi2=9.264496908604166 (change=12.759123255271415 %)
[2025-05-25 13:03:51] 2025-05-25 17:03:28,315 | INFO     | right removable region: 588
[2025-05-25 13:03:51] 2025-05-25 17:03:28,316 | INFO     | sum of square deviations: 63358096195.96613
[2025-05-25 13:03:51] 2025-05-25 17:03:28,401 | INFO     | sum of deviations: 594192671432.3589
[2025-05-25 13:03:51] 2025-05-25 17:03:28,401 | INFO     | mean x: 1748174614.3887947
[2025-05-25 13:03:51] 2025-05-25 17:03:28,401 | INFO     | mean y: 2130738.4482173175
[2025-05-25 13:03:51] 2025-05-25 17:03:28,402 | INFO     | -- intersect: -16392814921.551693
[2025-05-25 13:03:51] 2025-05-25 17:03:28,402 | INFO     | intersect: -16392814921.551693
[2025-05-25 13:03:51] 2025-05-25 17:03:28,402 | INFO     | chi2: 6.451579380076345
[2025-05-25 13:03:51] 2025-05-25 17:03:28,402 | INFO     | current chi2=6.451579380076345 (change=39.24748995454376 %)
[2025-05-25 13:03:51] 2025-05-25 17:03:28,403 | INFO     | sum of square deviations: 61758070770.203896
[2025-05-25 13:03:51] 2025-05-25 17:03:28,487 | INFO     | sum of deviations: 466717590742.41254
[2025-05-25 13:03:51] 2025-05-25 17:03:28,487 | INFO     | mean x: 1748174766.8921232
[2025-05-25 13:03:51] 2025-05-25 17:03:28,487 | INFO     | mean y: 2142884.546232877
[2025-05-25 13:03:51] 2025-05-25 17:03:28,487 | INFO     | -- intersect: -13209149262.782557
[2025-05-25 13:03:51] 2025-05-25 17:03:28,487 | INFO     | intersect: -13209149262.782557
[2025-05-25 13:03:51] 2025-05-25 17:03:28,560 | INFO     | chi2: 4.295809482383064
[2025-05-25 13:03:51] 2025-05-25 17:03:28,560 | INFO     | current chi2=4.295809482383064 (change=33.41460703949008 %)
[2025-05-25 13:03:51] 2025-05-25 17:03:28,561 | INFO     | sum of square deviations: 60185279526.00341
[2025-05-25 13:03:51] 2025-05-25 17:03:28,633 | INFO     | sum of deviations: 384878850136.3049
[2025-05-25 13:03:51] 2025-05-25 17:03:28,633 | INFO     | mean x: 1748174919.3920553
[2025-05-25 13:03:51] 2025-05-25 17:03:28,633 | INFO     | mean y: 2150816.196891192
[2025-05-25 13:03:51] 2025-05-25 17:03:28,633 | INFO     | -- intersect: -11177253152.87563
[2025-05-25 13:03:51] 2025-05-25 17:03:28,633 | INFO     | intersect: -11177253152.87563
[2025-05-25 13:03:51] 2025-05-25 17:03:28,634 | INFO     | chi2: 3.4729912862101693
[2025-05-25 13:03:51] 2025-05-25 17:03:28,634 | INFO     | current chi2=3.4729912862101693 (change=19.153973181241817 %)
[2025-05-25 13:03:51] 2025-05-25 17:03:28,634 | INFO     | left removable region: 30
[2025-05-25 13:03:51] 2025-05-25 17:03:28,635 | INFO     | sum of square deviations: 53870837527.57884
[2025-05-25 13:03:51] 2025-05-25 17:03:28,775 | INFO     | sum of deviations: 269547885172.90677
[2025-05-25 13:03:51] 2025-05-25 17:03:28,775 | INFO     | mean x: 1748175193.9014337
[2025-05-25 13:03:51] 2025-05-25 17:03:28,775 | INFO     | mean y: 2173717.616487455
[2025-05-25 13:03:51] 2025-05-25 17:03:28,775 | INFO     | -- intersect: -8744987976.066689
[2025-05-25 13:03:51] 2025-05-25 17:03:28,775 | INFO     | intersect: -8744987976.066689
[2025-05-25 13:03:51] 2025-05-25 17:03:28,776 | INFO     | chi2: 0.8318481590349902
[2025-05-25 13:03:51] 2025-05-25 17:03:28,776 | INFO     | -- intersect: -8744987976.066689
[2025-05-25 13:03:51] 2025-05-25 17:03:28,776 | INFO     | current memory leak: 5.00 B/s (using 558 data points, chi2=0.83)
[2025-05-25 13:03:51] 2025-05-25 17:03:28,777 | INFO     | ..............................
[2025-05-25 13:03:51] 2025-05-25 17:03:28,777 | INFO     | . Timing measurements:
[2025-05-25 13:03:51] 2025-05-25 17:03:28,777 | INFO     | . get job = 0 s
[2025-05-25 13:03:51] 2025-05-25 17:03:28,777 | INFO     | . initial setup = 4 s
[2025-05-25 13:03:51] 2025-05-25 17:03:28,777 | INFO     | . payload setup = 51 s
[2025-05-25 13:03:51] 2025-05-25 17:03:28,777 | INFO     | . stage-in = 0 s
[2025-05-25 13:03:51] 2025-05-25 17:03:28,777 | INFO     | . payload execution = 36224 s
[2025-05-25 13:03:51] 2025-05-25 17:03:28,777 | INFO     | . stage-out = 6 s
[2025-05-25 13:03:51] 2025-05-25 17:03:28,777 | INFO     | . log creation = 1 s
[2025-05-25 13:03:51] 2025-05-25 17:03:28,777 | INFO     | ..............................
[2025-05-25 13:03:51] 2025-05-25 17:03:29,307 | INFO     | 
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | job summary report
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | --------------------------------------------------
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | PanDA job id: 6665681094
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | task id: 44871837
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | errors: (none)
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | pilot state: finished 
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | transexitcode: 0
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | exeerrorcode: 0
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | exeerrordiag: 
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | exitcode: 0
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | exitmsg: OK
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | cpuconsumptiontime: 42245 s
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | nevents: 400
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | neventsw: 0
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | pid: 807519
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | pgrp: 807519
[2025-05-25 13:03:51] 2025-05-25 17:03:29,308 | INFO     | corecount: 8
[2025-05-25 13:03:51] 2025-05-25 17:03:29,309 | INFO     | event service: False
[2025-05-25 13:03:51] 2025-05-25 17:03:29,309 | INFO     | sizes: {0: 2393512, 1: 2393767, 12: 2393767, 19: 2394001, 24: 2394029, 36282: 2433413, 36289: 2442354, 36291: 2442410, 36324: 2442580}
[2025-05-25 13:03:51] 2025-05-25 17:03:29,309 | INFO     | --------------------------------------------------
[2025-05-25 13:03:51] 2025-05-25 17:03:29,309 | INFO     | 
[2025-05-25 13:03:51] 2025-05-25 17:03:29,309 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-05-25 13:03:51] 2025-05-25 17:03:29,430 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,430 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,430 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,430 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,431 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 13:03:51] 2025-05-25 17:03:29,432 | INFO     | job 6665681094 has completed (purged errors)
[2025-05-25 13:03:51] 2025-05-25 17:03:29,432 | INFO     | overall cleanup function is called
[2025-05-25 13:03:51] 2025-05-25 17:03:30,489 | INFO     | --- collectZombieJob: --- 10, [807519]
[2025-05-25 13:03:51] 2025-05-25 17:03:30,489 | INFO     | zombie collector waiting for pid 807519
[2025-05-25 13:03:51] 2025-05-25 17:03:30,489 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 13:03:51] 2025-05-25 17:03:30,489 | INFO     | collected zombie processes
[2025-05-25 13:03:51] 2025-05-25 17:03:30,490 | INFO     | will attempt to kill all subprocesses of pid=807519
[2025-05-25 13:03:51] 2025-05-25 17:03:35,975 | INFO     | PID=728231 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-25 13:03:51] 2025-05-25 17:03:35,975 | INFO     | .. there are 54 such processes running
[2025-05-25 13:03:51] 2025-05-25 17:03:35,996 | INFO     | process IDs to be killed: [807519] (in reverse order)
[2025-05-25 13:03:51] 2025-05-25 17:03:36,586 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 13:03:51] 2025-05-25 17:03:36,586 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 13:03:51] 2025-05-25 17:03:36,677 | INFO     | did not find any defunct processes belonging to 807519
[2025-05-25 13:03:51] 2025-05-25 17:03:36,760 | INFO     | did not find any defunct processes belonging to 807519
[2025-05-25 13:03:51] 2025-05-25 17:03:36,761 | INFO     | ready for new job
[2025-05-25 13:03:51] 2025-05-25 17:03:36,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 13:03:51] 2025-05-25 17:03:36,770 | INFO     | **************************************
[2025-05-25 13:03:51] 2025-05-25 17:03:36,770 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 13:03:51] 2025-05-25 17:03:36,770 | INFO     | **************************************
[2025-05-25 13:03:51] 2025-05-25 17:03:36,770 | INFO     | 
[2025-05-25 13:03:51] 2025-05-25 17:03:36,780 | INFO     | architecture information:
[2025-05-25 13:03:51] 2025-05-25 17:03:36,787 | INFO     | executing command: cat /etc/os-release
[2025-05-25 13:03:51] 2025-05-25 17:03:36,898 | INFO     | cat /etc/os-release:
[2025-05-25 13:03:51] NAME="CentOS Linux"
[2025-05-25 13:03:51] VERSION="7 (Core)"
[2025-05-25 13:03:51] ID="centos"
[2025-05-25 13:03:51] ID_LIKE="rhel fedora"
[2025-05-25 13:03:51] VERSION_ID="7"
[2025-05-25 13:03:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 13:03:51] ANSI_COLOR="0;31"
[2025-05-25 13:03:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 13:03:51] HOME_URL="https://www.centos.org/"
[2025-05-25 13:03:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 13:03:51] 
[2025-05-25 13:03:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 13:03:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 13:03:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 13:03:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 13:03:51] 
[2025-05-25 13:03:51] 2025-05-25 17:03:36,898 | INFO     | **************************************
[2025-05-25 13:03:51] 2025-05-25 17:03:37,402 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-05-25 13:03:51] 2025-05-25 17:03:37,540 | INFO     | sufficient remaining disk space (73972842496 B)
[2025-05-25 13:03:51] 2025-05-25 17:03:37,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 13:03:51] 2025-05-25 17:03:37,541 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 13:03:51] 2025-05-25 17:03:37,541 | INFO     | update_server=False
[2025-05-25 13:03:51] 2025-05-25 17:03:37,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 13:03:51] 2025-05-25 17:03:37,607 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 13:03:51] 2025-05-25 17:03:37,607 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 13:03:51] 2025-05-25 17:03:37,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 13:03:51] 2025-05-25 17:03:37,607 | INFO     | will abort loop
[2025-05-25 13:03:51] 2025-05-25 17:03:37,895 | INFO     | all data control threads have been joined
[2025-05-25 13:03:51] 2025-05-25 17:03:37,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 13:03:51] 2025-05-25 17:03:37,983 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 13:03:51] 2025-05-25 17:03:37,983 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 13:03:51] 2025-05-25 17:03:37,983 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 13:03:51] 2025-05-25 17:03:38,343 | INFO     | all payload control threads have been joined
[2025-05-25 13:03:51] 2025-05-25 17:03:38,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 13:03:51] 2025-05-25 17:03:38,547 | INFO     | [job] retrieve thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:38,613 | INFO     | [job] job monitor thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:38,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 13:03:51] 2025-05-25 17:03:38,663 | INFO     | [data] copytool_in thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:38,723 | INFO     | [job] validate thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:38,918 | INFO     | [data] control thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:38,927 | INFO     | [payload] failed_post thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:38,976 | INFO     | [payload] validate_post thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:39,100 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:39,114 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:39,227 | INFO     | all job control threads have been joined
[2025-05-25 13:03:51] 2025-05-25 17:03:39,348 | INFO     | [payload] control thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:39,393 | INFO     | [job] queue monitor thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:39,643 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:39,643 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:39,931 | INFO     | [data] copytool_out thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:40,235 | INFO     | [job] control thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:42,665 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 13:03:51] 2025-05-25 17:03:44,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057087612736)>', '<ExcThread(monitor, started 140056417244928)>']
[2025-05-25 13:03:51] 2025-05-25 17:03:45,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 13:03:51] 2025-05-25 17:03:45,051 | INFO     | [monitor] control thread has ended
[2025-05-25 13:03:51] 2025-05-25 17:03:49,328 | INFO     | all workflow threads have been joined
[2025-05-25 13:03:51] 2025-05-25 17:03:49,328 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 13:03:51] 2025-05-25 17:03:49,328 | INFO     | traces error code: 0
[2025-05-25 13:03:51] 2025-05-25 17:03:49,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 13:03:51] 2025-05-25 17:03:50,092 [wrapper] ==== pilot stdout END ====
[2025-05-25 13:03:51] 2025-05-25 17:03:50,120 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 13:03:51] 2025-05-25 17:03:50,162 [wrapper] pilotpid: 728231
[2025-05-25 13:03:51] 2025-05-25 17:03:50,191 [wrapper] Pilot exit status: 0
[2025-05-25 13:03:51] 2025-05-25 17:03:50,384 [wrapper] pandaids: 6665681094
[2025-05-25 13:03:51] 2025-05-25 17:03:50,962 [wrapper] cleanup supervisor_pilot 4190508 728232
[2025-05-25 13:03:51] 2025-05-25 17:03:50,991 [wrapper] Test setup, not cleaning
[2025-05-25 13:03:51] 2025-05-25 17:03:51,021 [wrapper] apfmon messages muted
[2025-05-25 13:03:51] 2025-05-25 17:03:51,052 [wrapper] ==== wrapper stdout END ====
[2025-05-25 13:03:51] 2025-05-25 17:03:51,105 [wrapper] ==== wrapper stderr END ====
[2025-05-25 13:03:51]  *** Error codes and diagnostics ***
[2025-05-25 13:03:51]     "exeErrorCode": 0,
[2025-05-25 13:03:51]     "exeErrorDiag": "",
[2025-05-25 13:03:51]     "pilotErrorCode": 0,
[2025-05-25 13:03:51]     "pilotErrorDiag": "",
[2025-05-25 13:03:51]  *** Listing of results directory ***
[2025-05-25 13:03:51] total 426992
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas    495897 May 24 17:37 pilot3.tar.gz
[2025-05-25 13:03:51] -rwx------. 1 boincer umatlas     37140 May 24 17:38 runpilot2-wrapper.sh
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas      5111 May 24 17:38 queuedata.json
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas       100 May 25 02:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 13:03:51] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 02:55 run_atlas
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas       105 May 25 02:55 job.xml
[2025-05-25 13:03:51] -rw-r--r--. 2 boincer umatlas 222820757 May 25 02:55 EVNT.44871834._000979.pool.root.1
[2025-05-25 13:03:51] drwxrwx--x. 2 boincer umatlas      4096 May 25 02:55 shared
[2025-05-25 13:03:51] -rw-r--r--. 2 boincer umatlas    508876 May 25 02:55 input.tar.gz
[2025-05-25 13:03:51] -rw-r--r--. 2 boincer umatlas     15093 May 25 02:55 start_atlas.sh
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas         0 May 25 02:55 boinc_lockfile
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas      2558 May 25 02:55 pandaJob.out
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas    990811 May 25 02:56 agis_schedconf.cvmfs.json
[2025-05-25 13:03:51] drwx------. 4 boincer umatlas      4096 May 25 02:56 pilot3
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas      6934 May 25 12:56 init_data.xml
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas 204498370 May 25 13:00 HITS.44871837._024569.pool.root.1
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas       531 May 25 13:00 boinc_task_state.xml
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas      1048 May 25 13:02 memory_monitor_summary.json
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas   1596740 May 25 13:02 agis_ddmendpoints.agis.ALL.json
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas    572992 May 25 13:02 log.44871837._024569.job.log.tgz.1
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas        95 May 25 13:03 pilot_heartbeat.json
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas      7718 May 25 13:03 heartbeat.json
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas        28 May 25 13:03 wrapper_checkpoint.txt
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas      8192 May 25 13:03 boinc_mmap_file
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas      4539 May 25 13:03 pilotlog.txt
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas   2470179 May 25 13:03 log.44871837._024569.job.log.1
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas       357 May 25 13:03 output.list
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas       620 May 25 13:03 runtime_log
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas   3061760 May 25 13:03 result.tar.gz
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas      8655 May 25 13:03 runtime_log.err
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas       663 May 25 13:03 dwrNDmIkBd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3fSKDmX30xqm.diag
[2025-05-25 13:03:51] -rw-r--r--. 1 boincer umatlas     20982 May 25 13:03 stderr.txt
[2025-05-25 13:03:51] HITS file was successfully produced:
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas 204498370 May 25 13:00 shared/HITS.pool.root.1
[2025-05-25 13:03:51]  *** Contents of shared directory: ***
[2025-05-25 13:03:51] total 420824
[2025-05-25 13:03:51] -rw-r--r--. 2 boincer umatlas 222820757 May 25 02:55 ATLAS.root_0
[2025-05-25 13:03:51] -rw-r--r--. 2 boincer umatlas    508876 May 25 02:55 input.tar.gz
[2025-05-25 13:03:51] -rw-r--r--. 2 boincer umatlas     15093 May 25 02:55 start_atlas.sh
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas 204498370 May 25 13:00 HITS.pool.root.1
[2025-05-25 13:03:51] -rw-------. 1 boincer umatlas   3061760 May 25 13:03 result.tar.gz
13:03:53 (702388): run_atlas exited; CPU time 43745.731636
13:03:53 (702388): called boinc_finish(0)

</stderr_txt>
]]>

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