Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:55:33 (701491): wrapper (7.7.26015): starting
02:55:33 (701491): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 02:55:33] Arguments: --nthreads 8
[2025-05-25 02:55:33] Threads: 8
[2025-05-25 02:55:33] Checking for CVMFS
[2025-05-25 02:55:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 02:55:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 02:55:34] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 02:55:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 02:55:35] 2.12.6.0 383503 8776 343836 146393 3 326 21740971 32935937 40146 16776704 0 69425430 99.617 69914274 21959 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 02:55:35] CVMFS is ok
[2025-05-25 02:55:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 02:55:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 02:55:35] Further information can be found at the LHC@home message board.
[2025-05-25 02:55:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 02:55:35] Checking for apptainer binary...
[2025-05-25 02:55:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 02:55:35] Running /usr/bin/apptainer --version
[2025-05-25 02:55:35] apptainer version 1.4.1-1.el9
[2025-05-25 02:55:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 02:55:36] c7-2-14.aglt2.org
[2025-05-25 02:55:36] apptainer works
[2025-05-25 02:55:36] Set ATHENA_PROC_NUMBER=8
[2025-05-25 02:55:36] Set ATHENA_CORE_NUMBER=8
[2025-05-25 02:55:36] Starting ATLAS job with PandaID=6665684797
[2025-05-25 02:55:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 11:34:00]  *** The last 200 lines of the pilot log: ***
[2025-05-25 11:34:00] 2025-05-25 15:33:38,603 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6665684797/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 11:34:00] 2025-05-25 15:33:38,604 | INFO     | extracted standard info from prmon json
[2025-05-25 11:34:00] 2025-05-25 15:33:38,604 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 11:34:00] 2025-05-25 15:33:38,604 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 11:34:00] 2025-05-25 15:33:38,604 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 11:34:00] 2025-05-25 15:33:38,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 11:34:00] 2025-05-25 15:33:38,610 | INFO     | fitting pss+swap vs Time
[2025-05-25 11:34:00] 2025-05-25 15:33:38,611 | INFO     | sum of square deviations: 40170592688.885216
[2025-05-25 11:34:00] 2025-05-25 15:33:38,616 | INFO     | sum of deviations: 304682757830.0716
[2025-05-25 11:34:00] 2025-05-25 15:33:38,616 | INFO     | mean x: 1748171786.881423
[2025-05-25 11:34:00] 2025-05-25 15:33:38,616 | INFO     | mean y: 2073478.9011857708
[2025-05-25 11:34:00] 2025-05-25 15:33:38,616 | INFO     | -- intersect: -13257322649.827866
[2025-05-25 11:34:00] 2025-05-25 15:33:38,617 | INFO     | intersect: -13257322649.827866
[2025-05-25 11:34:00] 2025-05-25 15:33:38,617 | INFO     | chi2: 6.2005585038202975
[2025-05-25 11:34:00] 2025-05-25 15:33:38,617 | INFO     | sum of square deviations: 38991494560.65068
[2025-05-25 11:34:00] 2025-05-25 15:33:38,630 | INFO     | sum of deviations: 329916058242.9459
[2025-05-25 11:34:00] 2025-05-25 15:33:38,630 | INFO     | mean x: 1748171634.3852296
[2025-05-25 11:34:00] 2025-05-25 15:33:38,630 | INFO     | mean y: 2076711.4251497006
[2025-05-25 11:34:00] 2025-05-25 15:33:38,630 | INFO     | -- intersect: -14789608020.00718
[2025-05-25 11:34:00] 2025-05-25 15:33:38,630 | INFO     | intersect: -14789608020.00718
[2025-05-25 11:34:00] 2025-05-25 15:33:38,631 | INFO     | chi2: 5.42628496686706
[2025-05-25 11:34:00] 2025-05-25 15:33:38,631 | INFO     | current chi2=5.42628496686706 (change=12.487157995141741 %)
[2025-05-25 11:34:00] 2025-05-25 15:33:38,631 | INFO     | right removable region: 500
[2025-05-25 11:34:00] 2025-05-25 15:33:38,631 | INFO     | sum of square deviations: 38991376830.650665
[2025-05-25 11:34:00] 2025-05-25 15:33:38,636 | INFO     | sum of deviations: 167146867178.7624
[2025-05-25 11:34:00] 2025-05-25 15:33:38,636 | INFO     | mean x: 1748171939.3852296
[2025-05-25 11:34:00] 2025-05-25 15:33:38,636 | INFO     | mean y: 2091252.0219560878
[2025-05-25 11:34:00] 2025-05-25 15:33:38,636 | INFO     | -- intersect: -7491910927.669381
[2025-05-25 11:34:00] 2025-05-25 15:33:38,636 | INFO     | intersect: -7491910927.669381
[2025-05-25 11:34:00] 2025-05-25 15:33:38,637 | INFO     | chi2: 2.304244572193006
[2025-05-25 11:34:00] 2025-05-25 15:33:38,637 | INFO     | current chi2=2.304244572193006 (change=62.83811255432376 %)
[2025-05-25 11:34:00] 2025-05-25 15:33:38,637 | INFO     | sum of square deviations: 37835524366.449524
[2025-05-25 11:34:00] 2025-05-25 15:33:38,642 | INFO     | sum of deviations: 97000626677.86295
[2025-05-25 11:34:00] 2025-05-25 15:33:38,642 | INFO     | mean x: 1748172091.8850806
[2025-05-25 11:34:00] 2025-05-25 15:33:38,642 | INFO     | mean y: 2100495.9274193547
[2025-05-25 11:34:00] 2025-05-25 15:33:38,642 | INFO     | -- intersect: -4479766513.796706
[2025-05-25 11:34:00] 2025-05-25 15:33:38,642 | INFO     | intersect: -4479766513.796706
[2025-05-25 11:34:00] 2025-05-25 15:33:38,643 | INFO     | chi2: 1.3363696237369878
[2025-05-25 11:34:00] 2025-05-25 15:33:38,643 | INFO     | current chi2=1.3363696237369878 (change=42.00400253237302 %)
[2025-05-25 11:34:00] 2025-05-25 15:33:38,643 | INFO     | sum of square deviations: 36702682080.700615
[2025-05-25 11:34:00] 2025-05-25 15:33:38,648 | INFO     | sum of deviations: 68366668627.898285
[2025-05-25 11:34:00] 2025-05-25 15:33:38,648 | INFO     | mean x: 1748172244.389002
[2025-05-25 11:34:00] 2025-05-25 15:33:38,648 | INFO     | mean y: 2104343.83299389
[2025-05-25 11:34:00] 2025-05-25 15:33:38,648 | INFO     | -- intersect: -3254243850.9349747
[2025-05-25 11:34:00] 2025-05-25 15:33:38,648 | INFO     | intersect: -3254243850.9349747
[2025-05-25 11:34:00] 2025-05-25 15:33:38,648 | INFO     | chi2: 1.1714222480754204
[2025-05-25 11:34:00] 2025-05-25 15:33:38,648 | INFO     | current chi2=1.1714222480754204 (change=12.342945599160881 %)
[2025-05-25 11:34:00] 2025-05-25 15:33:38,648 | INFO     | left removable region: 30
[2025-05-25 11:34:00] 2025-05-25 15:33:38,649 | INFO     | sum of square deviations: 32191828419.023346
[2025-05-25 11:34:00] 2025-05-25 15:33:38,654 | INFO     | sum of deviations: 63908214156.223404
[2025-05-25 11:34:00] 2025-05-25 15:33:38,654 | INFO     | mean x: 1748172518.887234
[2025-05-25 11:34:00] 2025-05-25 15:33:38,654 | INFO     | mean y: 2112045.287234043
[2025-05-25 11:34:00] 2025-05-25 15:33:38,654 | INFO     | -- intersect: -3468414147.411061
[2025-05-25 11:34:00] 2025-05-25 15:33:38,654 | INFO     | intersect: -3468414147.411061
[2025-05-25 11:34:00] 2025-05-25 15:33:38,654 | INFO     | chi2: 0.2253791591779985
[2025-05-25 11:34:00] 2025-05-25 15:33:38,655 | INFO     | -- intersect: -3468414147.411061
[2025-05-25 11:34:00] 2025-05-25 15:33:38,655 | INFO     | current memory leak: 1.99 B/s (using 470 data points, chi2=0.23)
[2025-05-25 11:34:00] 2025-05-25 15:33:38,655 | INFO     | ..............................
[2025-05-25 11:34:00] 2025-05-25 15:33:38,655 | INFO     | . Timing measurements:
[2025-05-25 11:34:00] 2025-05-25 15:33:38,656 | INFO     | . get job = 0 s
[2025-05-25 11:34:00] 2025-05-25 15:33:38,656 | INFO     | . initial setup = 7 s
[2025-05-25 11:34:00] 2025-05-25 15:33:38,656 | INFO     | . payload setup = 62 s
[2025-05-25 11:34:00] 2025-05-25 15:33:38,656 | INFO     | . stage-in = 0 s
[2025-05-25 11:34:00] 2025-05-25 15:33:38,656 | INFO     | . payload execution = 30867 s
[2025-05-25 11:34:00] 2025-05-25 15:33:38,656 | INFO     | . stage-out = 2 s
[2025-05-25 11:34:00] 2025-05-25 15:33:38,656 | INFO     | . log creation = 0 s
[2025-05-25 11:34:00] 2025-05-25 15:33:38,656 | INFO     | ..............................
[2025-05-25 11:34:00] 2025-05-25 15:33:38,739 | INFO     | 
[2025-05-25 11:34:00] 2025-05-25 15:33:38,739 | INFO     | job summary report
[2025-05-25 11:34:00] 2025-05-25 15:33:38,739 | INFO     | --------------------------------------------------
[2025-05-25 11:34:00] 2025-05-25 15:33:38,739 | INFO     | PanDA job id: 6665684797
[2025-05-25 11:34:00] 2025-05-25 15:33:38,739 | INFO     | task id: 44871837
[2025-05-25 11:34:00] 2025-05-25 15:33:38,739 | INFO     | errors: (none)
[2025-05-25 11:34:00] 2025-05-25 15:33:38,740 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 11:34:00] 2025-05-25 15:33:38,740 | INFO     | pilot state: finished 
[2025-05-25 11:34:00] 2025-05-25 15:33:38,740 | INFO     | transexitcode: 0
[2025-05-25 11:34:00] 2025-05-25 15:33:38,740 | INFO     | exeerrorcode: 0
[2025-05-25 11:34:00] 2025-05-25 15:33:38,740 | INFO     | exeerrordiag: 
[2025-05-25 11:34:00] 2025-05-25 15:33:38,740 | INFO     | exitcode: 0
[2025-05-25 11:34:00] 2025-05-25 15:33:38,741 | INFO     | exitmsg: OK
[2025-05-25 11:34:00] 2025-05-25 15:33:38,741 | INFO     | cpuconsumptiontime: 40840 s
[2025-05-25 11:34:00] 2025-05-25 15:33:38,741 | INFO     | nevents: 400
[2025-05-25 11:34:00] 2025-05-25 15:33:38,741 | INFO     | neventsw: 0
[2025-05-25 11:34:00] 2025-05-25 15:33:38,741 | INFO     | pid: 806866
[2025-05-25 11:34:00] 2025-05-25 15:33:38,741 | INFO     | pgrp: 806866
[2025-05-25 11:34:00] 2025-05-25 15:33:38,742 | INFO     | corecount: 8
[2025-05-25 11:34:00] 2025-05-25 15:33:38,742 | INFO     | event service: False
[2025-05-25 11:34:00] 2025-05-25 15:33:38,742 | INFO     | sizes: {0: 2392862, 1: 2393547, 2: 2393746, 13: 2393746, 23: 2394008, 24: 2394036, 30933: 2430658, 30934: 2430685, 30937: 2439738, 30946: 2439852}
[2025-05-25 11:34:00] 2025-05-25 15:33:38,742 | INFO     | --------------------------------------------------
[2025-05-25 11:34:00] 2025-05-25 15:33:38,742 | INFO     | 
[2025-05-25 11:34:00] 2025-05-25 15:33:38,742 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-05-25 11:34:00] 2025-05-25 15:33:38,775 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,775 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,775 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,775 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,775 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,775 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | job 6665684797 has completed (purged errors)
[2025-05-25 11:34:00] 2025-05-25 15:33:38,776 | INFO     | overall cleanup function is called
[2025-05-25 11:34:00] 2025-05-25 15:33:39,785 | INFO     | --- collectZombieJob: --- 10, [806866]
[2025-05-25 11:34:00] 2025-05-25 15:33:39,785 | INFO     | zombie collector waiting for pid 806866
[2025-05-25 11:34:00] 2025-05-25 15:33:39,785 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 11:34:00] 2025-05-25 15:33:39,785 | INFO     | collected zombie processes
[2025-05-25 11:34:00] 2025-05-25 15:33:39,785 | INFO     | will attempt to kill all subprocesses of pid=806866
[2025-05-25 11:34:00] 2025-05-25 15:33:40,319 | INFO     | process IDs to be killed: [806866] (in reverse order)
[2025-05-25 11:34:00] 2025-05-25 15:33:40,513 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 11:34:00] 2025-05-25 15:33:40,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 11:34:00] 2025-05-25 15:33:40,535 | INFO     | did not find any defunct processes belonging to 806866
[2025-05-25 11:34:00] 2025-05-25 15:33:40,558 | INFO     | did not find any defunct processes belonging to 806866
[2025-05-25 11:34:00] 2025-05-25 15:33:40,559 | INFO     | ready for new job
[2025-05-25 11:34:00] 2025-05-25 15:33:40,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 11:34:00] 2025-05-25 15:33:40,560 | INFO     | **************************************
[2025-05-25 11:34:00] 2025-05-25 15:33:40,560 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 11:34:00] 2025-05-25 15:33:40,561 | INFO     | **************************************
[2025-05-25 11:34:00] 2025-05-25 15:33:40,561 | INFO     | 
[2025-05-25 11:34:00] 2025-05-25 15:33:40,566 | INFO     | architecture information:
[2025-05-25 11:34:00] 2025-05-25 15:33:40,566 | INFO     | executing command: cat /etc/os-release
[2025-05-25 11:34:00] 2025-05-25 15:33:40,597 | INFO     | cat /etc/os-release:
[2025-05-25 11:34:00] NAME="CentOS Linux"
[2025-05-25 11:34:00] VERSION="7 (Core)"
[2025-05-25 11:34:00] ID="centos"
[2025-05-25 11:34:00] ID_LIKE="rhel fedora"
[2025-05-25 11:34:00] VERSION_ID="7"
[2025-05-25 11:34:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 11:34:00] ANSI_COLOR="0;31"
[2025-05-25 11:34:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 11:34:00] HOME_URL="https://www.centos.org/"
[2025-05-25 11:34:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 11:34:00] 
[2025-05-25 11:34:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 11:34:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 11:34:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 11:34:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 11:34:00] 
[2025-05-25 11:34:00] 2025-05-25 15:33:40,597 | INFO     | **************************************
[2025-05-25 11:34:00] 2025-05-25 15:33:41,100 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-05-25 11:34:00] 2025-05-25 15:33:41,136 | INFO     | sufficient remaining disk space (73373057024 B)
[2025-05-25 11:34:00] 2025-05-25 15:33:41,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 11:34:00] 2025-05-25 15:33:41,137 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 11:34:00] 2025-05-25 15:33:41,137 | INFO     | update_server=False
[2025-05-25 11:34:00] 2025-05-25 15:33:41,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 11:34:00] 2025-05-25 15:33:41,138 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 11:34:00] 2025-05-25 15:33:41,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 11:34:00] 2025-05-25 15:33:41,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 11:34:00] 2025-05-25 15:33:41,145 | INFO     | aborting loop
[2025-05-25 11:34:00] 2025-05-25 15:33:41,285 | INFO     | all payload control threads have been joined
[2025-05-25 11:34:00] 2025-05-25 15:33:41,367 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 11:34:00] 2025-05-25 15:33:41,367 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 11:34:00] 2025-05-25 15:33:41,367 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 11:34:00] 2025-05-25 15:33:41,477 | INFO     | all data control threads have been joined
[2025-05-25 11:34:00] 2025-05-25 15:33:42,105 | INFO     | all job control threads have been joined
[2025-05-25 11:34:00] 2025-05-25 15:33:42,143 | INFO     | [job] retrieve thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:42,151 | INFO     | [job] job monitor thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:42,291 | INFO     | [payload] control thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:42,389 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:42,487 | INFO     | [data] control thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:42,714 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:42,895 | INFO     | [payload] failed_post thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:43,086 | INFO     | [data] copytool_in thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:43,111 | INFO     | [job] control thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:43,145 | INFO     | [data] copytool_out thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:43,504 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:43,549 | INFO     | [job] validate thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:43,715 | INFO     | [payload] validate_post thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:43,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 11:34:00] 2025-05-25 15:33:44,750 | INFO     | [job] queue monitor thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:45,149 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:51,884 | INFO     | job.realtimelogging is not enabled
[2025-05-25 11:34:00] 2025-05-25 15:33:52,889 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 11:34:00] 2025-05-25 15:33:54,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761583757120)>', '<ExcThread(monitor, started 139760542656256)>']
[2025-05-25 11:34:00] 2025-05-25 15:33:55,451 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 11:34:00] 2025-05-25 15:33:55,451 | INFO     | [monitor] control thread has ended
[2025-05-25 11:34:00] 2025-05-25 15:33:59,877 | INFO     | all workflow threads have been joined
[2025-05-25 11:34:00] 2025-05-25 15:33:59,877 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 11:34:00] 2025-05-25 15:33:59,878 | INFO     | traces error code: 0
[2025-05-25 11:34:00] 2025-05-25 15:33:59,878 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 11:34:00] 2025-05-25 15:34:00,007 [wrapper] ==== pilot stdout END ====
[2025-05-25 11:34:00] 2025-05-25 15:34:00,010 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 11:34:00] 2025-05-25 15:34:00,012 [wrapper] pilotpid: 722767
[2025-05-25 11:34:00] 2025-05-25 15:34:00,015 [wrapper] Pilot exit status: 0
[2025-05-25 11:34:00] 2025-05-25 15:34:00,025 [wrapper] pandaids: 6665684797
[2025-05-25 11:34:00] 2025-05-25 15:34:00,164 [wrapper] cleanup supervisor_pilot 2981899 722768
[2025-05-25 11:34:00] 2025-05-25 15:34:00,168 [wrapper] Test setup, not cleaning
[2025-05-25 11:34:00] 2025-05-25 15:34:00,171 [wrapper] apfmon messages muted
[2025-05-25 11:34:00] 2025-05-25 15:34:00,175 [wrapper] ==== wrapper stdout END ====
[2025-05-25 11:34:00] 2025-05-25 15:34:00,194 [wrapper] ==== wrapper stderr END ====
[2025-05-25 11:34:00]  *** Error codes and diagnostics ***
[2025-05-25 11:34:00]     "exeErrorCode": 0,
[2025-05-25 11:34:00]     "exeErrorDiag": "",
[2025-05-25 11:34:00]     "pilotErrorCode": 0,
[2025-05-25 11:34:00]     "pilotErrorDiag": "",
[2025-05-25 11:34:00]  *** Listing of results directory ***
[2025-05-25 11:34:00] total 424948
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas    495897 May 24 20:23 pilot3.tar.gz
[2025-05-25 11:34:00] -rwx------. 1 boincer umatlas     37140 May 24 20:37 runpilot2-wrapper.sh
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas      5111 May 24 20:37 queuedata.json
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas       100 May 25 02:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 11:34:00] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 02:55 run_atlas
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas       105 May 25 02:55 job.xml
[2025-05-25 11:34:00] -rw-r--r--. 2 boincer umatlas 224443616 May 25 02:55 EVNT.44871834._001062.pool.root.1
[2025-05-25 11:34:00] -rw-r--r--. 2 boincer umatlas     15093 May 25 02:55 start_atlas.sh
[2025-05-25 11:34:00] drwxrwx--x. 2 boincer umatlas      4096 May 25 02:55 shared
[2025-05-25 11:34:00] -rw-r--r--. 2 boincer umatlas    508876 May 25 02:55 input.tar.gz
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas         0 May 25 02:55 boinc_lockfile
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas      2558 May 25 02:55 pandaJob.out
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas    990811 May 25 02:56 agis_schedconf.cvmfs.json
[2025-05-25 11:34:00] drwx------. 4 boincer umatlas      4096 May 25 02:56 pilot3
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas      6934 May 25 11:31 init_data.xml
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas        95 May 25 11:32 pilot_heartbeat.json
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas 201709327 May 25 11:32 HITS.44871837._026645.pool.root.1
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas       531 May 25 11:32 boinc_task_state.xml
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas      1043 May 25 11:33 memory_monitor_summary.json
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas   1596740 May 25 11:33 agis_ddmendpoints.agis.ALL.json
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas    518699 May 25 11:33 log.44871837._026645.job.log.tgz.1
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas      7697 May 25 11:33 heartbeat.json
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas      8192 May 25 11:33 boinc_mmap_file
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas        28 May 25 11:33 wrapper_checkpoint.txt
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas      4425 May 25 11:33 pilotlog.txt
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas   2060715 May 25 11:34 log.44871837._026645.job.log.1
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas       357 May 25 11:34 output.list
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas       620 May 25 11:34 runtime_log
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas   2600960 May 25 11:34 result.tar.gz
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas      8655 May 25 11:34 runtime_log.err
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas       659 May 25 11:34 oT0NDmgXEd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmj0SKDmlkI8mn.diag
[2025-05-25 11:34:00] -rw-r--r--. 1 boincer umatlas     20910 May 25 11:34 stderr.txt
[2025-05-25 11:34:00] HITS file was successfully produced:
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas 201709327 May 25 11:32 shared/HITS.pool.root.1
[2025-05-25 11:34:00]  *** Contents of shared directory: ***
[2025-05-25 11:34:00] total 419232
[2025-05-25 11:34:00] -rw-r--r--. 2 boincer umatlas 224443616 May 25 02:55 ATLAS.root_0
[2025-05-25 11:34:00] -rw-r--r--. 2 boincer umatlas     15093 May 25 02:55 start_atlas.sh
[2025-05-25 11:34:00] -rw-r--r--. 2 boincer umatlas    508876 May 25 02:55 input.tar.gz
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas 201709327 May 25 11:32 HITS.pool.root.1
[2025-05-25 11:34:00] -rw-------. 1 boincer umatlas   2600960 May 25 11:34 result.tar.gz
11:34:01 (701491): run_atlas exited; CPU time 42141.103833
11:34:01 (701491): called boinc_finish(0)

</stderr_txt>
]]>

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