Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:00:40 (9298): wrapper (7.7.26015): starting
03:00:40 (9298): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 03:00:40] Arguments: --nthreads 8
[2025-05-25 03:00:40] Threads: 8
[2025-05-25 03:00:40] Checking for CVMFS
[2025-05-25 03:00:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 03:00:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 03:00:41] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 03:00:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 03:00:43] 2.11.2.0 7082 14055 162680 146393 2 806 17442259 18432000 20499 130560 0 51027304 99.343 68170904 34636 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 03:00:43] CVMFS is ok
[2025-05-25 03:00:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 03:00:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 03:00:43] Further information can be found at the LHC@home message board.
[2025-05-25 03:00:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 03:00:43] Checking for apptainer binary...
[2025-05-25 03:00:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 03:00:43] Running /usr/bin/apptainer --version
[2025-05-25 03:00:43] apptainer version 1.3.2-1.el7
[2025-05-25 03:00:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 03:01:04] c-211-35-3.aglt2.org
[2025-05-25 03:01:04] apptainer works
[2025-05-25 03:01:04] Set ATHENA_PROC_NUMBER=8
[2025-05-25 03:01:04] Set ATHENA_CORE_NUMBER=8
[2025-05-25 03:01:04] Starting ATLAS job with PandaID=6665441535
[2025-05-25 03:01:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:27:54 (14570): wrapper (7.7.26015): starting
07:27:54 (14570): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 07:27:54] Arguments: --nthreads 8
[2025-05-25 07:27:54] Threads: 8
[2025-05-25 07:27:54] This job has been restarted, cleaning up previous attempt
[2025-05-25 07:27:54] Checking for CVMFS
[2025-05-25 07:27:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 07:27:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 07:27:56] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 07:27:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 07:27:57] 2.11.2.0 7082 14322 142220 146401 3 331 18425427 18432001 19142 130560 0 51793638 99.351 68420435 34001 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 07:27:57] CVMFS is ok
[2025-05-25 07:27:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 07:27:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 07:27:57] Further information can be found at the LHC@home message board.
[2025-05-25 07:27:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 07:27:57] Checking for apptainer binary...
[2025-05-25 07:27:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 07:27:57] Running /usr/bin/apptainer --version
[2025-05-25 07:27:57] apptainer version 1.3.2-1.el7
[2025-05-25 07:27:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 07:28:04] c-211-35-3.aglt2.org
[2025-05-25 07:28:04] apptainer works
[2025-05-25 07:28:04] Set ATHENA_PROC_NUMBER=8
[2025-05-25 07:28:04] Set ATHENA_CORE_NUMBER=8
[2025-05-25 07:28:04] Starting ATLAS job with PandaID=6665441535
[2025-05-25 07:28:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 15:23:55]  *** The last 200 lines of the pilot log: ***
[2025-05-25 15:23:55] 2025-05-25 19:23:39,302 | INFO     | sum of deviations: 142021243738.89325
[2025-05-25 15:23:55] 2025-05-25 19:23:39,302 | INFO     | mean x: 1748186972.3681917
[2025-05-25 15:23:55] 2025-05-25 19:23:39,302 | INFO     | mean y: 2482809.48583878
[2025-05-25 15:23:55] 2025-05-25 19:23:39,302 | INFO     | -- intersect: -8277518113.07307
[2025-05-25 15:23:55] 2025-05-25 19:23:39,302 | INFO     | intersect: -8277518113.07307
[2025-05-25 15:23:55] 2025-05-25 19:23:39,303 | INFO     | chi2: 0.47700692927751004
[2025-05-25 15:23:55] 2025-05-25 19:23:39,303 | INFO     | current chi2=0.47700692927751004 (change=87.93377318688019 %)
[2025-05-25 15:23:55] 2025-05-25 19:23:39,303 | INFO     | sum of square deviations: 29016122098.59036
[2025-05-25 15:23:55] 2025-05-25 19:23:39,308 | INFO     | sum of deviations: 100867272902.77536
[2025-05-25 15:23:55] 2025-05-25 19:23:39,308 | INFO     | mean x: 1748187124.8722467
[2025-05-25 15:23:55] 2025-05-25 19:23:39,308 | INFO     | mean y: 2489273.720264317
[2025-05-25 15:23:55] 2025-05-25 19:23:39,308 | INFO     | -- intersect: -6074644921.209723
[2025-05-25 15:23:55] 2025-05-25 19:23:39,308 | INFO     | intersect: -6074644921.209723
[2025-05-25 15:23:55] 2025-05-25 19:23:39,309 | INFO     | chi2: 0.2090009213753425
[2025-05-25 15:23:55] 2025-05-25 19:23:39,309 | INFO     | current chi2=0.2090009213753425 (change=56.18492970492023 %)
[2025-05-25 15:23:55] 2025-05-25 19:23:39,310 | INFO     | sum of square deviations: 28067922085.140255
[2025-05-25 15:23:55] 2025-05-25 19:23:39,314 | INFO     | sum of deviations: 78207988081.79506
[2025-05-25 15:23:55] 2025-05-25 19:23:39,314 | INFO     | mean x: 1748187277.3741648
[2025-05-25 15:23:55] 2025-05-25 19:23:39,315 | INFO     | mean y: 2492918.1202672604
[2025-05-25 15:23:55] 2025-05-25 19:23:39,315 | INFO     | -- intersect: -4868626836.982945
[2025-05-25 15:23:55] 2025-05-25 19:23:39,315 | INFO     | intersect: -4868626836.982945
[2025-05-25 15:23:55] 2025-05-25 19:23:39,316 | INFO     | chi2: 0.13939267508989533
[2025-05-25 15:23:55] 2025-05-25 19:23:39,316 | INFO     | current chi2=0.13939267508989533 (change=33.30523417188122 %)
[2025-05-25 15:23:55] 2025-05-25 19:23:39,316 | INFO     | sum of square deviations: 27140633938.93702
[2025-05-25 15:23:55] 2025-05-25 19:23:39,321 | INFO     | sum of deviations: 55898336146.84682
[2025-05-25 15:23:55] 2025-05-25 19:23:39,321 | INFO     | mean x: 1748187429.873874
[2025-05-25 15:23:55] 2025-05-25 19:23:39,321 | INFO     | mean y: 2496587.1936936937
[2025-05-25 15:23:55] 2025-05-25 19:23:39,321 | INFO     | -- intersect: -3598037166.8314085
[2025-05-25 15:23:55] 2025-05-25 19:23:39,321 | INFO     | intersect: -3598037166.8314085
[2025-05-25 15:23:55] 2025-05-25 19:23:39,322 | INFO     | chi2: 0.06687765979408718
[2025-05-25 15:23:55] 2025-05-25 19:23:39,322 | INFO     | current chi2=0.06687765979408718 (change=52.02211324880788 %)
[2025-05-25 15:23:55] 2025-05-25 19:23:39,323 | INFO     | sum of square deviations: 26234050776.21846
[2025-05-25 15:23:55] 2025-05-25 19:23:39,327 | INFO     | sum of deviations: 36457599756.69699
[2025-05-25 15:23:55] 2025-05-25 19:23:39,327 | INFO     | mean x: 1748187582.3690205
[2025-05-25 15:23:55] 2025-05-25 19:23:39,327 | INFO     | mean y: 2499853.5512528475
[2025-05-25 15:23:55] 2025-05-25 19:23:39,327 | INFO     | -- intersect: -2426965718.552234
[2025-05-25 15:23:55] 2025-05-25 19:23:39,327 | INFO     | intersect: -2426965718.552234
[2025-05-25 15:23:55] 2025-05-25 19:23:39,328 | INFO     | chi2: 0.00466162363803872
[2025-05-25 15:23:55] 2025-05-25 19:23:39,328 | INFO     | current chi2=0.00466162363803872 (change=93.02962506105683 %)
[2025-05-25 15:23:55] 2025-05-25 19:23:39,329 | INFO     | sum of square deviations: 25347833289.51384
[2025-05-25 15:23:55] 2025-05-25 19:23:39,332 | INFO     | sum of deviations: 32825631811.907837
[2025-05-25 15:23:55] 2025-05-25 19:23:39,333 | INFO     | mean x: 1748187734.8686635
[2025-05-25 15:23:55] 2025-05-25 19:23:39,333 | INFO     | mean y: 2500477.875576037
[2025-05-25 15:23:55] 2025-05-25 19:23:39,333 | INFO     | -- intersect: -2261415584.1979303
[2025-05-25 15:23:55] 2025-05-25 19:23:39,333 | INFO     | intersect: -2261415584.1979303
[2025-05-25 15:23:55] 2025-05-25 19:23:39,333 | INFO     | chi2: 0.0035005085964721857
[2025-05-25 15:23:55] 2025-05-25 19:23:39,333 | INFO     | current chi2=0.0035005085964721857 (change=24.907953359680686 %)
[2025-05-25 15:23:55] 2025-05-25 19:23:39,334 | INFO     | left removable region: 60
[2025-05-25 15:23:55] 2025-05-25 19:23:39,334 | INFO     | sum of square deviations: 19549023702.95482
[2025-05-25 15:23:55] 2025-05-25 19:23:39,338 | INFO     | sum of deviations: 19856718841.969856
[2025-05-25 15:23:55] 2025-05-25 19:23:39,338 | INFO     | mean x: 1748188466.8492463
[2025-05-25 15:23:55] 2025-05-25 19:23:39,338 | INFO     | mean y: 2502587.8994974876
[2025-05-25 15:23:55] 2025-05-25 19:23:39,338 | INFO     | -- intersect: -1773201784.6801388
[2025-05-25 15:23:55] 2025-05-25 19:23:39,338 | INFO     | intersect: -1773201784.6801388
[2025-05-25 15:23:55] 2025-05-25 19:23:39,339 | INFO     | chi2: 0.001020960364284869
[2025-05-25 15:23:55] 2025-05-25 19:23:39,339 | INFO     | -- intersect: -1773201784.6801388
[2025-05-25 15:23:55] 2025-05-25 19:23:39,339 | INFO     | current memory leak: 1.02 B/s (using 398 data points, chi2=0.00)
[2025-05-25 15:23:55] 2025-05-25 19:23:39,340 | INFO     | ..............................
[2025-05-25 15:23:55] 2025-05-25 19:23:39,340 | INFO     | . Timing measurements:
[2025-05-25 15:23:55] 2025-05-25 19:23:39,340 | INFO     | . get job = 0 s
[2025-05-25 15:23:55] 2025-05-25 19:23:39,340 | INFO     | . initial setup = 4 s
[2025-05-25 15:23:55] 2025-05-25 19:23:39,340 | INFO     | . payload setup = 48 s
[2025-05-25 15:23:55] 2025-05-25 19:23:39,340 | INFO     | . stage-in = 0 s
[2025-05-25 15:23:55] 2025-05-25 19:23:39,340 | INFO     | . payload execution = 28344 s
[2025-05-25 15:23:55] 2025-05-25 19:23:39,340 | INFO     | . stage-out = 3 s
[2025-05-25 15:23:55] 2025-05-25 19:23:39,340 | INFO     | . log creation = 0 s
[2025-05-25 15:23:55] 2025-05-25 19:23:39,341 | INFO     | ..............................
[2025-05-25 15:23:55] 2025-05-25 19:23:39,437 | INFO     | 
[2025-05-25 15:23:55] 2025-05-25 19:23:39,437 | INFO     | job summary report
[2025-05-25 15:23:55] 2025-05-25 19:23:39,437 | INFO     | --------------------------------------------------
[2025-05-25 15:23:55] 2025-05-25 19:23:39,437 | INFO     | PanDA job id: 6665441535
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | task id: 44871837
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | errors: (none)
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | pilot state: finished 
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | transexitcode: 0
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | exeerrorcode: 0
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | exeerrordiag: 
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | exitcode: 0
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | exitmsg: OK
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | cpuconsumptiontime: 61563 s
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | nevents: 400
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | neventsw: 0
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | pid: 77370
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | pgrp: 77370
[2025-05-25 15:23:55] 2025-05-25 19:23:39,438 | INFO     | corecount: 8
[2025-05-25 15:23:55] 2025-05-25 19:23:39,439 | INFO     | event service: False
[2025-05-25 15:23:55] 2025-05-25 19:23:39,439 | INFO     | sizes: {0: 2393512, 1: 2393596, 2: 2393795, 3: 2393795, 14: 2393823, 25: 2393851, 27: 2394213, 35: 2394241, 28397: 2430531, 28401: 2439472, 28402: 2439528, 28418: 
[2025-05-25 15:23:55] 2025-05-25 19:23:39,439 | INFO     | --------------------------------------------------
[2025-05-25 15:23:55] 2025-05-25 19:23:39,439 | INFO     | 
[2025-05-25 15:23:55] 2025-05-25 19:23:39,439 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-25 15:23:55] 2025-05-25 19:23:39,503 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,504 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,504 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,504 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,504 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,505 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 15:23:55] 2025-05-25 19:23:39,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,505 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 15:23:55] 2025-05-25 19:23:39,505 | INFO     | job 6665441535 has completed (purged errors)
[2025-05-25 15:23:55] 2025-05-25 19:23:39,505 | INFO     | overall cleanup function is called
[2025-05-25 15:23:55] 2025-05-25 19:23:40,514 | INFO     | --- collectZombieJob: --- 10, [77370]
[2025-05-25 15:23:55] 2025-05-25 19:23:40,514 | INFO     | zombie collector waiting for pid 77370
[2025-05-25 15:23:55] 2025-05-25 19:23:40,514 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 15:23:55] 2025-05-25 19:23:40,514 | INFO     | collected zombie processes
[2025-05-25 15:23:55] 2025-05-25 19:23:40,514 | INFO     | will attempt to kill all subprocesses of pid=77370
[2025-05-25 15:23:55] 2025-05-25 19:23:40,915 | INFO     | process IDs to be killed: [77370] (in reverse order)
[2025-05-25 15:23:55] 2025-05-25 19:23:41,133 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 15:23:55] 2025-05-25 19:23:41,134 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 15:23:55] 2025-05-25 19:23:41,144 | INFO     | did not find any defunct processes belonging to 77370
[2025-05-25 15:23:55] 2025-05-25 19:23:41,154 | INFO     | did not find any defunct processes belonging to 77370
[2025-05-25 15:23:55] 2025-05-25 19:23:41,154 | INFO     | ready for new job
[2025-05-25 15:23:55] 2025-05-25 19:23:41,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 15:23:55] 2025-05-25 19:23:41,156 | INFO     | **************************************
[2025-05-25 15:23:55] 2025-05-25 19:23:41,157 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 15:23:55] 2025-05-25 19:23:41,157 | INFO     | **************************************
[2025-05-25 15:23:55] 2025-05-25 19:23:41,157 | INFO     | 
[2025-05-25 15:23:55] 2025-05-25 19:23:41,162 | INFO     | architecture information:
[2025-05-25 15:23:55] 2025-05-25 19:23:41,162 | INFO     | executing command: cat /etc/os-release
[2025-05-25 15:23:55] 2025-05-25 19:23:41,190 | INFO     | cat /etc/os-release:
[2025-05-25 15:23:55] NAME="CentOS Linux"
[2025-05-25 15:23:55] VERSION="7 (Core)"
[2025-05-25 15:23:55] ID="centos"
[2025-05-25 15:23:55] ID_LIKE="rhel fedora"
[2025-05-25 15:23:55] VERSION_ID="7"
[2025-05-25 15:23:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 15:23:55] ANSI_COLOR="0;31"
[2025-05-25 15:23:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 15:23:55] HOME_URL="https://www.centos.org/"
[2025-05-25 15:23:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 15:23:55] 
[2025-05-25 15:23:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 15:23:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 15:23:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 15:23:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 15:23:55] 
[2025-05-25 15:23:55] 2025-05-25 19:23:41,190 | INFO     | **************************************
[2025-05-25 15:23:55] 2025-05-25 19:23:41,693 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-25 15:23:55] 2025-05-25 19:23:41,723 | INFO     | sufficient remaining disk space (102849576960 B)
[2025-05-25 15:23:55] 2025-05-25 19:23:41,724 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 15:23:55] 2025-05-25 19:23:41,724 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 15:23:55] 2025-05-25 19:23:41,724 | INFO     | update_server=False
[2025-05-25 15:23:55] 2025-05-25 19:23:41,725 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 15:23:55] 2025-05-25 19:23:41,725 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 15:23:55] 2025-05-25 19:23:41,726 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 15:23:55] 2025-05-25 19:23:41,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 15:23:55] 2025-05-25 19:23:41,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 15:23:55] 2025-05-25 19:23:41,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 15:23:55] 2025-05-25 19:23:41,727 | INFO     | aborting loop
[2025-05-25 15:23:55] 2025-05-25 19:23:41,764 | INFO     | all payload control threads have been joined
[2025-05-25 15:23:55] 2025-05-25 19:23:42,264 | INFO     | all data control threads have been joined
[2025-05-25 15:23:55] 2025-05-25 19:23:42,372 | INFO     | all job control threads have been joined
[2025-05-25 15:23:55] 2025-05-25 19:23:42,731 | INFO     | [job] retrieve thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:42,736 | INFO     | [job] job monitor thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:42,771 | INFO     | [payload] control thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:42,969 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:43,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 15:23:55] 2025-05-25 19:23:43,122 | INFO     | [payload] failed_post thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:43,270 | INFO     | [data] control thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:43,362 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:43,378 | INFO     | [job] control thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:43,403 | INFO     | [job] validate thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:43,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 15:23:55] 2025-05-25 19:23:43,457 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:43,561 | INFO     | [payload] validate_post thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:43,671 | INFO     | [data] copytool_in thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:43,943 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:44,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 15:23:55] 2025-05-25 19:23:45,050 | INFO     | [data] copytool_out thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:45,454 | INFO     | [job] queue monitor thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:47,433 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 15:23:55] 2025-05-25 19:23:49,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766113810240)>', '<ExcThread(monitor, started 139765525497600)>']
[2025-05-25 15:23:55] 2025-05-25 19:23:49,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 15:23:55] 2025-05-25 19:23:49,778 | INFO     | [monitor] control thread has ended
[2025-05-25 15:23:55] 2025-05-25 19:23:54,227 | INFO     | all workflow threads have been joined
[2025-05-25 15:23:55] 2025-05-25 19:23:54,227 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 15:23:55] 2025-05-25 19:23:54,227 | INFO     | traces error code: 0
[2025-05-25 15:23:55] 2025-05-25 19:23:54,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 15:23:55] 2025-05-25 19:23:54,674 [wrapper] ==== pilot stdout END ====
[2025-05-25 15:23:55] 2025-05-25 19:23:54,682 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 15:23:55] 2025-05-25 19:23:54,687 [wrapper] pilotpid: 37609
[2025-05-25 15:23:55] 2025-05-25 19:23:54,693 [wrapper] Pilot exit status: 0
[2025-05-25 15:23:55] 2025-05-25 19:23:54,723 [wrapper] pandaids: 6665441535 6665441535
[2025-05-25 15:23:55] 2025-05-25 19:23:54,815 [wrapper] cleanup supervisor_pilot 302290 37610
[2025-05-25 15:23:55] 2025-05-25 19:23:54,821 [wrapper] Test setup, not cleaning
[2025-05-25 15:23:55] 2025-05-25 19:23:54,830 [wrapper] apfmon messages muted
[2025-05-25 15:23:55] 2025-05-25 19:23:54,834 [wrapper] ==== wrapper stdout END ====
[2025-05-25 15:23:55] 2025-05-25 19:23:54,839 [wrapper] ==== wrapper stderr END ====
[2025-05-25 15:23:55]  *** Error codes and diagnostics ***
[2025-05-25 15:23:55]     "exeErrorCode": 0,
[2025-05-25 15:23:55]     "exeErrorDiag": "",
[2025-05-25 15:23:55]     "pilotErrorCode": 0,
[2025-05-25 15:23:55]     "pilotErrorDiag": "",
[2025-05-25 15:23:55]  *** Listing of results directory ***
[2025-05-25 15:23:55] total 644100
[2025-05-25 15:23:55] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas    495897 May 24 09:11 pilot3.tar.gz
[2025-05-25 15:23:55] -rwx------ 1 boincer umatlas     37140 May 24 09:23 runpilot2-wrapper.sh
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas      5111 May 24 09:23 queuedata.json
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas       100 May 25 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 15:23:55] -rwxr-xr-x 1 boincer umatlas      7986 May 25 03:00 run_atlas
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas       105 May 25 03:00 job.xml
[2025-05-25 15:23:55] -rw-r--r-- 3 boincer umatlas 226861958 May 25 03:00 EVNT.44871834._000718.pool.root.1
[2025-05-25 15:23:55] -rw-r--r-- 3 boincer umatlas 226861958 May 25 03:00 ATLAS.root_0
[2025-05-25 15:23:55] -rw-r--r-- 2 boincer umatlas     15093 May 25 03:00 start_atlas.sh
[2025-05-25 15:23:55] drwxrwx--x 2 boincer umatlas      4096 May 25 03:00 shared
[2025-05-25 15:23:55] -rw-r--r-- 2 boincer umatlas    508868 May 25 03:00 input.tar.gz
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas         0 May 25 03:00 boinc_lockfile
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas      2558 May 25 07:28 pandaJob.out
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas    990811 May 25 07:28 agis_schedconf.cvmfs.json
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas      6299 May 25 15:21 init_data.xml
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas 196431573 May 25 15:22 HITS.44871837._017958.pool.root.1
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas       531 May 25 15:22 boinc_task_state.xml
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas        96 May 25 15:23 pilot_heartbeat.json
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas      1063 May 25 15:23 memory_monitor_summary.json
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas   1596740 May 25 15:23 agis_ddmendpoints.agis.ALL.json
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas    520879 May 25 15:23 log.44871837._017958.job.log.tgz.1
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas      7763 May 25 15:23 heartbeat.json
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas        28 May 25 15:23 wrapper_checkpoint.txt
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas      8192 May 25 15:23 boinc_mmap_file
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas      4477 May 25 15:23 pilotlog.txt
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas   2261006 May 25 15:23 log.44871837._017958.job.log.1
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas       357 May 25 15:23 output.list
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas       620 May 25 15:23 runtime_log
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas   2805760 May 25 15:23 result.tar.gz
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas      8755 May 25 15:23 runtime_log.err
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas       789 May 25 15:23 P2RMDmX13c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmYRKDmzGTwLo.diag
[2025-05-25 15:23:55] -rw-r--r-- 1 boincer umatlas     23077 May 25 15:23 stderr.txt
[2025-05-25 15:23:55] HITS file was successfully produced:
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas 196431573 May 25 15:22 shared/HITS.pool.root.1
[2025-05-25 15:23:55]  *** Contents of shared directory: ***
[2025-05-25 15:23:55] total 416636
[2025-05-25 15:23:55] -rw-r--r-- 3 boincer umatlas 226861958 May 25 03:00 ATLAS.root_0
[2025-05-25 15:23:55] -rw-r--r-- 2 boincer umatlas     15093 May 25 03:00 start_atlas.sh
[2025-05-25 15:23:55] -rw-r--r-- 2 boincer umatlas    508868 May 25 03:00 input.tar.gz
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas 196431573 May 25 15:22 HITS.pool.root.1
[2025-05-25 15:23:55] -rw------- 1 boincer umatlas   2805760 May 25 15:23 result.tar.gz
15:23:57 (14570): run_atlas exited; CPU time 62590.215954
15:23:57 (14570): called boinc_finish(0)

</stderr_txt>
]]>

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