Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:36:13 (7424): wrapper (7.7.26015): starting
02:36:13 (7424): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 02:36:13] Arguments: --nthreads 8
[2025-05-25 02:36:13] Threads: 8
[2025-05-25 02:36:13] Checking for CVMFS
[2025-05-25 02:36:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 02:36:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 02:36:15] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 02:36:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 02:36:17] 2.11.2.0 5200 14030 147068 146393 1 474 13771302 18432001 22306 130560 0 81515116 99.260 121202576 50540 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 02:36:17] CVMFS is ok
[2025-05-25 02:36:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 02:36:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 02:36:17] Further information can be found at the LHC@home message board.
[2025-05-25 02:36:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 02:36:17] Checking for apptainer binary...
[2025-05-25 02:36:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 02:36:17] Running /usr/bin/apptainer --version
[2025-05-25 02:36:18] apptainer version 1.3.2-1.el7
[2025-05-25 02:36:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 02:37:01] c-212-7.aglt2.org
[2025-05-25 02:37:01] apptainer works
[2025-05-25 02:37:01] Set ATHENA_PROC_NUMBER=8
[2025-05-25 02:37:01] Set ATHENA_CORE_NUMBER=8
[2025-05-25 02:37:01] Starting ATLAS job with PandaID=6650756600
[2025-05-25 02:37:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:00:27 (74834): wrapper (7.7.26015): starting
05:00:27 (74834): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 05:00:27] Arguments: --nthreads 8
[2025-05-25 05:00:27] Threads: 8
[2025-05-25 05:00:27] This job has been restarted, cleaning up previous attempt
[2025-05-25 05:00:27] Checking for CVMFS
[2025-05-25 05:00:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 05:00:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 05:00:27] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 05:00:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 05:00:28] 2.11.2.0 5200 14175 154048 146395 2 656 16990607 18432001 19022 130560 0 82336359 99.261 121696534 49935 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 05:00:28] CVMFS is ok
[2025-05-25 05:00:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 05:00:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 05:00:28] Further information can be found at the LHC@home message board.
[2025-05-25 05:00:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 05:00:28] Checking for apptainer binary...
[2025-05-25 05:00:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 05:00:28] Running /usr/bin/apptainer --version
[2025-05-25 05:00:28] apptainer version 1.3.2-1.el7
[2025-05-25 05:00:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 05:00:30] c-212-7.aglt2.org
[2025-05-25 05:00:30] apptainer works
[2025-05-25 05:00:30] Set ATHENA_PROC_NUMBER=8
[2025-05-25 05:00:30] Set ATHENA_CORE_NUMBER=8
[2025-05-25 05:00:30] Starting ATLAS job with PandaID=6650756600
[2025-05-25 05:00:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 10:04:20]  *** The last 200 lines of the pilot log: ***
[2025-05-25 10:04:20] 2025-05-25 14:04:05,408 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 10:04:20] 2025-05-25 14:04:05,409 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6650756600/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 10:04:20] 2025-05-25 14:04:05,410 | INFO     | extracted standard info from prmon json
[2025-05-25 10:04:20] 2025-05-25 14:04:05,410 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 10:04:20] 2025-05-25 14:04:05,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 10:04:20] 2025-05-25 14:04:05,410 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 10:04:20] 2025-05-25 14:04:05,411 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 10:04:20] 2025-05-25 14:04:05,417 | INFO     | fitting pss+swap vs Time
[2025-05-25 10:04:20] 2025-05-25 14:04:05,417 | INFO     | sum of square deviations: 8205849264.56713
[2025-05-25 10:04:20] 2025-05-25 14:04:05,419 | INFO     | sum of deviations: 51343962927.77856
[2025-05-25 10:04:20] 2025-05-25 14:04:05,419 | INFO     | mean x: 1748172753.5805368
[2025-05-25 10:04:20] 2025-05-25 14:04:05,419 | INFO     | mean y: 2459791.134228188
[2025-05-25 10:04:20] 2025-05-25 14:04:05,419 | INFO     | -- intersect: -10935849475.496752
[2025-05-25 10:04:20] 2025-05-25 14:04:05,419 | INFO     | intersect: -10935849475.496752
[2025-05-25 10:04:20] 2025-05-25 14:04:05,420 | INFO     | chi2: 2.4004517150940794
[2025-05-25 10:04:20] 2025-05-25 14:04:05,420 | INFO     | sum of square deviations: 7799700132.034141
[2025-05-25 10:04:20] 2025-05-25 14:04:05,422 | INFO     | sum of deviations: 69714380275.90439
[2025-05-25 10:04:20] 2025-05-25 14:04:05,422 | INFO     | mean x: 1748172601.0819113
[2025-05-25 10:04:20] 2025-05-25 14:04:05,422 | INFO     | mean y: 2466588.170648464
[2025-05-25 10:04:20] 2025-05-25 14:04:05,422 | INFO     | -- intersect: -15622848159.405062
[2025-05-25 10:04:20] 2025-05-25 14:04:05,422 | INFO     | intersect: -15622848159.405062
[2025-05-25 10:04:20] 2025-05-25 14:04:05,422 | INFO     | chi2: 1.6266319771780742
[2025-05-25 10:04:20] 2025-05-25 14:04:05,422 | INFO     | current chi2=1.6266319771780742 (change=32.23642171388885 %)
[2025-05-25 10:04:20] 2025-05-25 14:04:05,423 | INFO     | sum of square deviations: 7407179162.000012
[2025-05-25 10:04:20] 2025-05-25 14:04:05,446 | INFO     | sum of deviations: 68176634544.41667
[2025-05-25 10:04:20] 2025-05-25 14:04:05,447 | INFO     | mean x: 1748172448.5833333
[2025-05-25 10:04:20] 2025-05-25 14:04:05,447 | INFO     | mean y: 2465990.670138889
[2025-05-25 10:04:20] 2025-05-25 14:04:05,447 | INFO     | -- intersect: -16087939215.014524
[2025-05-25 10:04:20] 2025-05-25 14:04:05,447 | INFO     | intersect: -16087939215.014524
[2025-05-25 10:04:20] 2025-05-25 14:04:05,447 | INFO     | chi2: 1.6268533192185277
[2025-05-25 10:04:20] 2025-05-25 14:04:05,447 | INFO     | current chi2=1.6268533192185277 (change=-0.01360738283514707 %)
[2025-05-25 10:04:20] 2025-05-25 14:04:05,447 | INFO     | right removable region: 287
[2025-05-25 10:04:20] 2025-05-25 14:04:05,448 | INFO     | sum of square deviations: 7799685492.034142
[2025-05-25 10:04:20] 2025-05-25 14:04:05,458 | INFO     | sum of deviations: -105538774.1945343
[2025-05-25 10:04:20] 2025-05-25 14:04:05,458 | INFO     | mean x: 1748172906.0819113
[2025-05-25 10:04:20] 2025-05-25 14:04:05,458 | INFO     | mean y: 2478986.133105802
[2025-05-25 10:04:20] 2025-05-25 14:04:05,458 | INFO     | -- intersect: 26133789.36541722
[2025-05-25 10:04:20] 2025-05-25 14:04:05,458 | INFO     | intersect: 26133789.36541722
[2025-05-25 10:04:20] 2025-05-25 14:04:05,458 | INFO     | chi2: 0.8059533329418865
[2025-05-25 10:04:20] 2025-05-25 14:04:05,459 | INFO     | current chi2=0.8059533329418865 (change=66.42493044646393 %)
[2025-05-25 10:04:20] 2025-05-25 14:04:05,459 | INFO     | sum of square deviations: 7407149882.000012
[2025-05-25 10:04:20] 2025-05-25 14:04:05,462 | INFO     | sum of deviations: -4067676208.166662
[2025-05-25 10:04:20] 2025-05-25 14:04:05,462 | INFO     | mean x: 1748173058.5833333
[2025-05-25 10:04:20] 2025-05-25 14:04:05,462 | INFO     | mean y: 2480510.340277778
[2025-05-25 10:04:20] 2025-05-25 14:04:05,463 | INFO     | -- intersect: 962499150.6323681
[2025-05-25 10:04:20] 2025-05-25 14:04:05,463 | INFO     | intersect: 962499150.6323681
[2025-05-25 10:04:20] 2025-05-25 14:04:05,463 | INFO     | chi2: 0.7896816843355272
[2025-05-25 10:04:20] 2025-05-25 14:04:05,463 | INFO     | current chi2=0.7896816843355272 (change=2.0189318588663983 %)
[2025-05-25 10:04:20] 2025-05-25 14:04:05,463 | INFO     | left removable region: 20
[2025-05-25 10:04:20] 2025-05-25 14:04:05,463 | INFO     | sum of square deviations: 5902103591.8427305
[2025-05-25 10:04:20] 2025-05-25 14:04:05,475 | INFO     | sum of deviations: 11349265183.112356
[2025-05-25 10:04:20] 2025-05-25 14:04:05,475 | INFO     | mean x: 1748173028.0898876
[2025-05-25 10:04:20] 2025-05-25 14:04:05,475 | INFO     | mean y: 2488778.0786516853
[2025-05-25 10:04:20] 2025-05-25 14:04:05,475 | INFO     | -- intersect: -3359105774.273512
[2025-05-25 10:04:20] 2025-05-25 14:04:05,476 | INFO     | intersect: -3359105774.273512
[2025-05-25 10:04:20] 2025-05-25 14:04:05,476 | INFO     | chi2: 0.00036402700208844503
[2025-05-25 10:04:20] 2025-05-25 14:04:05,476 | INFO     | -- intersect: -3359105774.273512
[2025-05-25 10:04:20] 2025-05-25 14:04:05,476 | INFO     | current memory leak: 1.92 B/s (using 267 data points, chi2=0.00)
[2025-05-25 10:04:20] 2025-05-25 14:04:05,488 | INFO     | ..............................
[2025-05-25 10:04:20] 2025-05-25 14:04:05,488 | INFO     | . Timing measurements:
[2025-05-25 10:04:20] 2025-05-25 14:04:05,488 | INFO     | . get job = 0 s
[2025-05-25 10:04:20] 2025-05-25 14:04:05,488 | INFO     | . initial setup = 1 s
[2025-05-25 10:04:20] 2025-05-25 14:04:05,488 | INFO     | . payload setup = 12 s
[2025-05-25 10:04:20] 2025-05-25 14:04:05,493 | INFO     | . stage-in = 0 s
[2025-05-25 10:04:20] 2025-05-25 14:04:05,493 | INFO     | . payload execution = 18141 s
[2025-05-25 10:04:20] 2025-05-25 14:04:05,493 | INFO     | . stage-out = 3 s
[2025-05-25 10:04:20] 2025-05-25 14:04:05,493 | INFO     | . log creation = 0 s
[2025-05-25 10:04:20] 2025-05-25 14:04:05,493 | INFO     | ..............................
[2025-05-25 10:04:20] 2025-05-25 14:04:05,781 | INFO     | 
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | job summary report
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | --------------------------------------------------
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | PanDA job id: 6650756600
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | task id: 44638099
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | errors: (none)
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | pilot state: finished 
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | transexitcode: 0
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | exeerrorcode: 0
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | exeerrordiag: 
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | exitcode: 0
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | exitmsg: OK
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | cpuconsumptiontime: 47517 s
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | nevents: 400
[2025-05-25 10:04:20] 2025-05-25 14:04:05,782 | INFO     | neventsw: 0
[2025-05-25 10:04:20] 2025-05-25 14:04:05,783 | INFO     | pid: 44410
[2025-05-25 10:04:20] 2025-05-25 14:04:05,783 | INFO     | pgrp: 44410
[2025-05-25 10:04:20] 2025-05-25 14:04:05,783 | INFO     | corecount: 8
[2025-05-25 10:04:20] 2025-05-25 14:04:05,783 | INFO     | event service: False
[2025-05-25 10:04:20] 2025-05-25 14:04:05,783 | INFO     | sizes: {0: 2393709, 1: 2393709, 8: 2393943, 11: 2393971, 18158: 2426261, 18161: 2435202, 18164: 2435386, 18180: 2435556}
[2025-05-25 10:04:20] 2025-05-25 14:04:05,783 | INFO     | --------------------------------------------------
[2025-05-25 10:04:20] 2025-05-25 14:04:05,783 | INFO     | 
[2025-05-25 10:04:20] 2025-05-25 14:04:05,783 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-25 10:04:20] 2025-05-25 14:04:05,905 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,905 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | job 6650756600 has completed (purged errors)
[2025-05-25 10:04:20] 2025-05-25 14:04:05,906 | INFO     | overall cleanup function is called
[2025-05-25 10:04:20] 2025-05-25 14:04:06,913 | INFO     | --- collectZombieJob: --- 10, [44410]
[2025-05-25 10:04:20] 2025-05-25 14:04:06,913 | INFO     | zombie collector waiting for pid 44410
[2025-05-25 10:04:20] 2025-05-25 14:04:06,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 10:04:20] 2025-05-25 14:04:06,914 | INFO     | collected zombie processes
[2025-05-25 10:04:20] 2025-05-25 14:04:06,914 | INFO     | will attempt to kill all subprocesses of pid=44410
[2025-05-25 10:04:20] 2025-05-25 14:04:07,263 | INFO     | process IDs to be killed: [44410] (in reverse order)
[2025-05-25 10:04:20] 2025-05-25 14:04:07,379 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 10:04:20] 2025-05-25 14:04:07,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 10:04:20] 2025-05-25 14:04:07,390 | INFO     | did not find any defunct processes belonging to 44410
[2025-05-25 10:04:20] 2025-05-25 14:04:07,401 | INFO     | did not find any defunct processes belonging to 44410
[2025-05-25 10:04:20] 2025-05-25 14:04:07,401 | INFO     | ready for new job
[2025-05-25 10:04:20] 2025-05-25 14:04:07,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 10:04:20] 2025-05-25 14:04:07,403 | INFO     | **************************************
[2025-05-25 10:04:20] 2025-05-25 14:04:07,403 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 10:04:20] 2025-05-25 14:04:07,403 | INFO     | **************************************
[2025-05-25 10:04:20] 2025-05-25 14:04:07,404 | INFO     | 
[2025-05-25 10:04:20] 2025-05-25 14:04:07,408 | INFO     | architecture information:
[2025-05-25 10:04:20] 2025-05-25 14:04:07,408 | INFO     | executing command: cat /etc/os-release
[2025-05-25 10:04:20] 2025-05-25 14:04:07,425 | INFO     | cat /etc/os-release:
[2025-05-25 10:04:20] NAME="CentOS Linux"
[2025-05-25 10:04:20] VERSION="7 (Core)"
[2025-05-25 10:04:20] ID="centos"
[2025-05-25 10:04:20] ID_LIKE="rhel fedora"
[2025-05-25 10:04:20] VERSION_ID="7"
[2025-05-25 10:04:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 10:04:20] ANSI_COLOR="0;31"
[2025-05-25 10:04:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 10:04:20] HOME_URL="https://www.centos.org/"
[2025-05-25 10:04:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 10:04:20] 
[2025-05-25 10:04:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 10:04:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 10:04:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 10:04:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 10:04:20] 
[2025-05-25 10:04:20] 2025-05-25 14:04:07,426 | INFO     | **************************************
[2025-05-25 10:04:20] 2025-05-25 14:04:07,928 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-25 10:04:20] 2025-05-25 14:04:07,947 | INFO     | sufficient remaining disk space (102862159872 B)
[2025-05-25 10:04:20] 2025-05-25 14:04:07,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 10:04:20] 2025-05-25 14:04:07,948 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 10:04:20] 2025-05-25 14:04:07,948 | INFO     | update_server=False
[2025-05-25 10:04:20] 2025-05-25 14:04:07,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 10:04:20] 2025-05-25 14:04:07,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 10:04:20] 2025-05-25 14:04:08,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 10:04:20] 2025-05-25 14:04:08,011 | INFO     | aborting loop
[2025-05-25 10:04:20] 2025-05-25 14:04:08,192 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 10:04:20] 2025-05-25 14:04:08,193 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 10:04:20] 2025-05-25 14:04:08,193 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 10:04:20] 2025-05-25 14:04:08,370 | INFO     | all payload control threads have been joined
[2025-05-25 10:04:20] 2025-05-25 14:04:08,568 | INFO     | all data control threads have been joined
[2025-05-25 10:04:20] 2025-05-25 14:04:08,954 | INFO     | [job] retrieve thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:08,984 | INFO     | [payload] failed_post thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:09,017 | INFO     | [job] job monitor thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:09,317 | INFO     | all job control threads have been joined
[2025-05-25 10:04:20] 2025-05-25 14:04:09,376 | INFO     | [payload] control thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:09,406 | INFO     | [data] copytool_in thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:09,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 10:04:20] 2025-05-25 14:04:09,574 | INFO     | [data] control thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:09,955 | INFO     | [data] copytool_out thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:09,991 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:09,995 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:10,199 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:10,271 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:10,275 | INFO     | [job] validate thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:10,323 | INFO     | [job] control thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:10,427 | INFO     | [payload] validate_post thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:10,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 10:04:20] 2025-05-25 14:04:11,801 | INFO     | [job] queue monitor thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:13,563 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 10:04:20] 2025-05-25 14:04:14,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140689624880960)>', '<ExcThread(monitor, started 140689329334016)>']
[2025-05-25 10:04:20] 2025-05-25 14:04:14,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 10:04:20] 2025-05-25 14:04:14,227 | INFO     | [monitor] control thread has ended
[2025-05-25 10:04:20] 2025-05-25 14:04:19,138 | INFO     | all workflow threads have been joined
[2025-05-25 10:04:20] 2025-05-25 14:04:19,138 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 10:04:20] 2025-05-25 14:04:19,139 | INFO     | traces error code: 0
[2025-05-25 10:04:20] 2025-05-25 14:04:19,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 10:04:20] 2025-05-25 14:04:19,326 [wrapper] ==== pilot stdout END ====
[2025-05-25 10:04:20] 2025-05-25 14:04:19,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 10:04:20] 2025-05-25 14:04:19,359 [wrapper] pilotpid: 97130
[2025-05-25 10:04:20] 2025-05-25 14:04:19,404 [wrapper] Pilot exit status: 0
[2025-05-25 10:04:20] 2025-05-25 14:04:19,488 [wrapper] pandaids: 6650756600 6650756600
[2025-05-25 10:04:20] 2025-05-25 14:04:19,609 [wrapper] cleanup supervisor_pilot 33953 97131
[2025-05-25 10:04:20] 2025-05-25 14:04:19,672 [wrapper] Test setup, not cleaning
[2025-05-25 10:04:20] 2025-05-25 14:04:19,718 [wrapper] apfmon messages muted
[2025-05-25 10:04:20] 2025-05-25 14:04:19,780 [wrapper] ==== wrapper stdout END ====
[2025-05-25 10:04:20] 2025-05-25 14:04:19,784 [wrapper] ==== wrapper stderr END ====
[2025-05-25 10:04:20]  *** Error codes and diagnostics ***
[2025-05-25 10:04:20]     "exeErrorCode": 0,
[2025-05-25 10:04:20]     "exeErrorDiag": "",
[2025-05-25 10:04:20]     "pilotErrorCode": 0,
[2025-05-25 10:04:20]     "pilotErrorDiag": "",
[2025-05-25 10:04:20]  *** Listing of results directory ***
[2025-05-25 10:04:20] total 636572
[2025-05-25 10:04:20] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas    495897 May 24 19:44 pilot3.tar.gz
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas      5111 May 24 20:02 queuedata.json
[2025-05-25 10:04:20] -rwx------ 1 boincer umatlas     37140 May 24 20:02 runpilot2-wrapper.sh
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas       100 May 25 02:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 10:04:20] -rwxr-xr-x 1 boincer umatlas      7986 May 25 02:36 run_atlas
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas       105 May 25 02:36 job.xml
[2025-05-25 10:04:20] -rw-r--r-- 3 boincer umatlas 222803226 May 25 02:36 EVNT.44638096._000336.pool.root.1
[2025-05-25 10:04:20] -rw-r--r-- 3 boincer umatlas 222803226 May 25 02:36 ATLAS.root_0
[2025-05-25 10:04:20] -rw-r--r-- 2 boincer umatlas     15093 May 25 02:36 start_atlas.sh
[2025-05-25 10:04:20] drwxrwx--x 2 boincer umatlas      4096 May 25 02:36 shared
[2025-05-25 10:04:20] -rw-r--r-- 2 boincer umatlas    508882 May 25 02:36 input.tar.gz
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas         0 May 25 02:36 boinc_lockfile
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas      2538 May 25 05:00 pandaJob.out
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas    990811 May 25 05:00 agis_schedconf.cvmfs.json
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas      6387 May 25 10:01 init_data.xml
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas 198448203 May 25 10:03 HITS.44638099._029546.pool.root.1
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas       531 May 25 10:03 boinc_task_state.xml
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas        95 May 25 10:03 pilot_heartbeat.json
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas      1076 May 25 10:03 memory_monitor_summary.json
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas   1596740 May 25 10:03 agis_ddmendpoints.agis.ALL.json
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas    437878 May 25 10:03 log.44638099._029546.job.log.tgz.1
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas      7744 May 25 10:04 heartbeat.json
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas      8192 May 25 10:04 boinc_mmap_file
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas        28 May 25 10:04 wrapper_checkpoint.txt
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas      4354 May 25 10:04 pilotlog.txt
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas   1537059 May 25 10:04 log.44638099._029546.job.log.1
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas       357 May 25 10:04 output.list
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas       620 May 25 10:04 runtime_log
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas   1996800 May 25 10:04 result.tar.gz
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas      8740 May 25 10:04 runtime_log.err
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas       788 May 25 10:04 bZBNDmP0Dd7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0aNKDmML7dNn.diag
[2025-05-25 10:04:20] -rw-r--r-- 1 boincer umatlas     23033 May 25 10:04 stderr.txt
[2025-05-25 10:04:20] HITS file was successfully produced:
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas 198448203 May 25 10:03 shared/HITS.pool.root.1
[2025-05-25 10:04:20]  *** Contents of shared directory: ***
[2025-05-25 10:04:20] total 413860
[2025-05-25 10:04:20] -rw-r--r-- 3 boincer umatlas 222803226 May 25 02:36 ATLAS.root_0
[2025-05-25 10:04:20] -rw-r--r-- 2 boincer umatlas     15093 May 25 02:36 start_atlas.sh
[2025-05-25 10:04:20] -rw-r--r-- 2 boincer umatlas    508882 May 25 02:36 input.tar.gz
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas 198448203 May 25 10:03 HITS.pool.root.1
[2025-05-25 10:04:20] -rw------- 1 boincer umatlas   1996800 May 25 10:04 result.tar.gz
10:04:21 (74834): run_atlas exited; CPU time 47023.701461
10:04:21 (74834): called boinc_finish(0)

</stderr_txt>
]]>

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