Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:27:17 (3999782): wrapper (7.7.26015): starting
02:27:17 (3999782): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 02:27:17] Arguments: --nthreads 8
[2025-05-25 02:27:17] Threads: 8
[2025-05-25 02:27:17] Checking for CVMFS
[2025-05-25 02:27:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 02:27:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 02:27:18] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 02:27:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 02:27:19] 2.12.6.0 1062744 8486 265556 146393 2 156 24775609 32935937 25279 16776704 0 34631832 99.532 41717152 35060 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 02:27:19] CVMFS is ok
[2025-05-25 02:27:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 02:27:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 02:27:19] Further information can be found at the LHC@home message board.
[2025-05-25 02:27:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 02:27:19] Checking for apptainer binary...
[2025-05-25 02:27:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 02:27:19] Running /usr/bin/apptainer --version
[2025-05-25 02:27:19] apptainer version 1.4.1-1.el9
[2025-05-25 02:27:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 02:27:20] c6-4-5-2.aglt2.org
[2025-05-25 02:27:20] apptainer works
[2025-05-25 02:27:20] Set ATHENA_PROC_NUMBER=8
[2025-05-25 02:27:20] Set ATHENA_CORE_NUMBER=8
[2025-05-25 02:27:20] Starting ATLAS job with PandaID=6665684210
[2025-05-25 02:27:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 07:54:45]  *** The last 200 lines of the pilot log: ***
[2025-05-25 07:54:45] 2025-05-25 11:54:16,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 07:54:45] 2025-05-25 11:54:19,403 | INFO     | monitor loop #1186: job 0:6665684210 is in state 'finished'
[2025-05-25 07:54:45] 2025-05-25 11:54:19,404 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 07:54:45] 2025-05-25 11:54:21,908 | INFO     | monitor loop #1187: job 0:6665684210 is in state 'finished'
[2025-05-25 07:54:45] 2025-05-25 11:54:21,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 07:54:45] 2025-05-25 11:54:24,428 | INFO     | monitor loop #1188: job 0:6665684210 is in state 'finished'
[2025-05-25 07:54:45] 2025-05-25 11:54:24,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 07:54:45] 2025-05-25 11:54:26,792 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-25 07:54:45] 2025-05-25 11:54:26,792 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6665684210/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 07:54:45] 2025-05-25 11:54:26,793 | INFO     | extracted standard info from prmon json
[2025-05-25 07:54:45] 2025-05-25 11:54:26,793 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 07:54:45] 2025-05-25 11:54:26,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 07:54:45] 2025-05-25 11:54:26,793 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 07:54:45] 2025-05-25 11:54:26,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 07:54:45] 2025-05-25 11:54:26,800 | INFO     | fitting pss+swap vs Time
[2025-05-25 07:54:45] 2025-05-25 11:54:26,800 | INFO     | sum of square deviations: 9877169529.280739
[2025-05-25 07:54:45] 2025-05-25 11:54:26,806 | INFO     | sum of deviations: 65022586362.25865
[2025-05-25 07:54:45] 2025-05-25 11:54:26,806 | INFO     | mean x: 1748164352.362776
[2025-05-25 07:54:45] 2025-05-25 11:54:26,806 | INFO     | mean y: 2095233.615141956
[2025-05-25 07:54:45] 2025-05-25 11:54:26,806 | INFO     | -- intersect: -11506279431.81475
[2025-05-25 07:54:45] 2025-05-25 11:54:26,806 | INFO     | intersect: -11506279431.81475
[2025-05-25 07:54:45] 2025-05-25 11:54:26,807 | INFO     | chi2: 4.960448879570655
[2025-05-25 07:54:45] 2025-05-25 11:54:26,807 | INFO     | sum of square deviations: 9417082515.79482
[2025-05-25 07:54:45] 2025-05-25 11:54:26,824 | INFO     | sum of deviations: 79397873909.7692
[2025-05-25 07:54:45] 2025-05-25 11:54:26,824 | INFO     | mean x: 1748164199.8589745
[2025-05-25 07:54:45] 2025-05-25 11:54:26,824 | INFO     | mean y: 2099926.653846154
[2025-05-25 07:54:45] 2025-05-25 11:54:26,824 | INFO     | -- intersect: -14737127480.685099
[2025-05-25 07:54:45] 2025-05-25 11:54:26,824 | INFO     | intersect: -14737127480.685099
[2025-05-25 07:54:45] 2025-05-25 11:54:26,825 | INFO     | chi2: 4.313492752711292
[2025-05-25 07:54:45] 2025-05-25 11:54:26,825 | INFO     | current chi2=4.313492752711292 (change=13.0422899734703 %)
[2025-05-25 07:54:45] 2025-05-25 11:54:26,825 | INFO     | right removable region: 311
[2025-05-25 07:54:45] 2025-05-25 11:54:26,825 | INFO     | sum of square deviations: 9417089106.346235
[2025-05-25 07:54:45] 2025-05-25 11:54:26,828 | INFO     | sum of deviations: -6132488847.84614
[2025-05-25 07:54:45] 2025-05-25 11:54:26,828 | INFO     | mean x: 1748164504.8653846
[2025-05-25 07:54:45] 2025-05-25 11:54:26,828 | INFO     | mean y: 2118762.3846153845
[2025-05-25 07:54:45] 2025-05-25 11:54:26,829 | INFO     | -- intersect: 1140538417.2504447
[2025-05-25 07:54:45] 2025-05-25 11:54:26,829 | INFO     | intersect: 1140538417.2504447
[2025-05-25 07:54:45] 2025-05-25 11:54:26,829 | INFO     | chi2: 2.12297351640389
[2025-05-25 07:54:45] 2025-05-25 11:54:26,829 | INFO     | current chi2=2.12297351640389 (change=57.20198780503024 %)
[2025-05-25 07:54:45] 2025-05-25 11:54:26,829 | INFO     | sum of square deviations: 8971520827.407198
[2025-05-25 07:54:45] 2025-05-25 11:54:26,833 | INFO     | sum of deviations: -34019606568.094482
[2025-05-25 07:54:45] 2025-05-25 11:54:26,833 | INFO     | mean x: 1748164657.3680782
[2025-05-25 07:54:45] 2025-05-25 11:54:26,833 | INFO     | mean y: 2128285.602605863
[2025-05-25 07:54:45] 2025-05-25 11:54:26,833 | INFO     | -- intersect: 6631090643.715673
[2025-05-25 07:54:45] 2025-05-25 11:54:26,833 | INFO     | intersect: 6631090643.715673
[2025-05-25 07:54:45] 2025-05-25 11:54:26,834 | INFO     | chi2: 1.6683615379835766
[2025-05-25 07:54:45] 2025-05-25 11:54:26,834 | INFO     | current chi2=1.6683615379835766 (change=21.413926029109476 %)
[2025-05-25 07:54:45] 2025-05-25 11:54:26,834 | INFO     | left removable region: 20
[2025-05-25 07:54:45] 2025-05-25 11:54:26,834 | INFO     | sum of square deviations: 7640574381.945031
[2025-05-25 07:54:45] 2025-05-25 11:54:26,868 | INFO     | sum of deviations: -24140473113.608223
[2025-05-25 07:54:45] 2025-05-25 11:54:26,869 | INFO     | mean x: 1748164779.347079
[2025-05-25 07:54:45] 2025-05-25 11:54:26,869 | INFO     | mean y: 2135280.402061856
[2025-05-25 07:54:45] 2025-05-25 11:54:26,869 | INFO     | -- intersect: 5525479828.124655
[2025-05-25 07:54:45] 2025-05-25 11:54:26,869 | INFO     | intersect: 5525479828.124655
[2025-05-25 07:54:45] 2025-05-25 11:54:26,869 | INFO     | chi2: 0.848307350438477
[2025-05-25 07:54:45] 2025-05-25 11:54:26,869 | INFO     | -- intersect: 5525479828.124655
[2025-05-25 07:54:45] 2025-05-25 11:54:26,869 | INFO     | current memory leak: -3.16 B/s (using 291 data points, chi2=0.85)
[2025-05-25 07:54:45] 2025-05-25 11:54:26,870 | INFO     | ..............................
[2025-05-25 07:54:45] 2025-05-25 11:54:26,870 | INFO     | . Timing measurements:
[2025-05-25 07:54:45] 2025-05-25 11:54:26,870 | INFO     | . get job = 0 s
[2025-05-25 07:54:45] 2025-05-25 11:54:26,870 | INFO     | . initial setup = 7 s
[2025-05-25 07:54:45] 2025-05-25 11:54:26,870 | INFO     | . payload setup = 65 s
[2025-05-25 07:54:45] 2025-05-25 11:54:26,871 | INFO     | . stage-in = 0 s
[2025-05-25 07:54:45] 2025-05-25 11:54:26,871 | INFO     | . payload execution = 19348 s
[2025-05-25 07:54:45] 2025-05-25 11:54:26,871 | INFO     | . stage-out = 3 s
[2025-05-25 07:54:45] 2025-05-25 11:54:26,871 | INFO     | . log creation = 0 s
[2025-05-25 07:54:45] 2025-05-25 11:54:26,871 | INFO     | ..............................
[2025-05-25 07:54:45] 2025-05-25 11:54:27,271 | INFO     | 
[2025-05-25 07:54:45] 2025-05-25 11:54:27,272 | INFO     | job summary report
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | --------------------------------------------------
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | PanDA job id: 6665684210
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | task id: 44871837
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | errors: (none)
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | pilot state: finished 
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | transexitcode: 0
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | exeerrorcode: 0
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | exeerrordiag: 
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | exitcode: 0
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | exitmsg: OK
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | cpuconsumptiontime: 45037 s
[2025-05-25 07:54:45] 2025-05-25 11:54:27,273 | INFO     | nevents: 400
[2025-05-25 07:54:45] 2025-05-25 11:54:27,274 | INFO     | neventsw: 0
[2025-05-25 07:54:45] 2025-05-25 11:54:27,274 | INFO     | pid: 4045637
[2025-05-25 07:54:45] 2025-05-25 11:54:27,274 | INFO     | pgrp: 4045637
[2025-05-25 07:54:45] 2025-05-25 11:54:27,274 | INFO     | corecount: 8
[2025-05-25 07:54:45] 2025-05-25 11:54:27,274 | INFO     | event service: False
[2025-05-25 07:54:45] 2025-05-25 11:54:27,274 | INFO     | sizes: {0: 2393514, 1: 2393570, 4: 2393598, 5: 2393825, 6: 2393853, 7: 2393881, 18: 2394037, 29: 2394065, 40: 2394093, 41: 2394327, 52: 2394355, 19418: 2427285, 19
[2025-05-25 07:54:45] 2025-05-25 11:54:27,274 | INFO     | --------------------------------------------------
[2025-05-25 07:54:45] 2025-05-25 11:54:27,274 | INFO     | 
[2025-05-25 07:54:45] 2025-05-25 11:54:27,274 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-25 07:54:45] 2025-05-25 11:54:27,471 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,471 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,473 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 07:54:45] 2025-05-25 11:54:27,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,473 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 07:54:45] 2025-05-25 11:54:27,473 | INFO     | job 6665684210 has completed (purged errors)
[2025-05-25 07:54:45] 2025-05-25 11:54:27,473 | INFO     | overall cleanup function is called
[2025-05-25 07:54:45] 2025-05-25 11:54:28,485 | INFO     | --- collectZombieJob: --- 10, [4045637]
[2025-05-25 07:54:45] 2025-05-25 11:54:28,486 | INFO     | zombie collector waiting for pid 4045637
[2025-05-25 07:54:45] 2025-05-25 11:54:28,486 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 07:54:45] 2025-05-25 11:54:28,486 | INFO     | collected zombie processes
[2025-05-25 07:54:45] 2025-05-25 11:54:28,486 | INFO     | will attempt to kill all subprocesses of pid=4045637
[2025-05-25 07:54:45] 2025-05-25 11:54:29,014 | INFO     | process IDs to be killed: [4045637] (in reverse order)
[2025-05-25 07:54:45] 2025-05-25 11:54:29,125 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 07:54:45] 2025-05-25 11:54:29,126 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 07:54:45] 2025-05-25 11:54:29,181 | INFO     | did not find any defunct processes belonging to 4045637
[2025-05-25 07:54:45] 2025-05-25 11:54:29,227 | INFO     | did not find any defunct processes belonging to 4045637
[2025-05-25 07:54:45] 2025-05-25 11:54:29,228 | INFO     | ready for new job
[2025-05-25 07:54:45] 2025-05-25 11:54:29,228 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 07:54:45] 2025-05-25 11:54:29,234 | INFO     | **************************************
[2025-05-25 07:54:45] 2025-05-25 11:54:29,234 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 07:54:45] 2025-05-25 11:54:29,234 | INFO     | **************************************
[2025-05-25 07:54:45] 2025-05-25 11:54:29,234 | INFO     | 
[2025-05-25 07:54:45] 2025-05-25 11:54:29,242 | INFO     | architecture information:
[2025-05-25 07:54:45] 2025-05-25 11:54:29,243 | INFO     | executing command: cat /etc/os-release
[2025-05-25 07:54:45] 2025-05-25 11:54:29,322 | INFO     | cat /etc/os-release:
[2025-05-25 07:54:45] NAME="CentOS Linux"
[2025-05-25 07:54:45] VERSION="7 (Core)"
[2025-05-25 07:54:45] ID="centos"
[2025-05-25 07:54:45] ID_LIKE="rhel fedora"
[2025-05-25 07:54:45] VERSION_ID="7"
[2025-05-25 07:54:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 07:54:45] ANSI_COLOR="0;31"
[2025-05-25 07:54:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 07:54:45] HOME_URL="https://www.centos.org/"
[2025-05-25 07:54:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 07:54:45] 
[2025-05-25 07:54:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 07:54:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 07:54:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 07:54:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 07:54:45] 
[2025-05-25 07:54:45] 2025-05-25 11:54:29,322 | INFO     | **************************************
[2025-05-25 07:54:45] 2025-05-25 11:54:29,826 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-25 07:54:45] 2025-05-25 11:54:29,871 | INFO     | sufficient remaining disk space (74964795392 B)
[2025-05-25 07:54:45] 2025-05-25 11:54:29,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 07:54:45] 2025-05-25 11:54:29,871 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 07:54:45] 2025-05-25 11:54:29,871 | INFO     | update_server=False
[2025-05-25 07:54:45] 2025-05-25 11:54:29,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 07:54:45] 2025-05-25 11:54:29,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 07:54:45] 2025-05-25 11:54:29,885 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 07:54:45] 2025-05-25 11:54:29,885 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 07:54:45] 2025-05-25 11:54:29,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 07:54:45] 2025-05-25 11:54:29,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 07:54:45] 2025-05-25 11:54:30,338 | INFO     | all payload control threads have been joined
[2025-05-25 07:54:45] 2025-05-25 11:54:30,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 07:54:45] 2025-05-25 11:54:30,515 | INFO     | aborting loop
[2025-05-25 07:54:45] 2025-05-25 11:54:30,847 | INFO     | all data control threads have been joined
[2025-05-25 07:54:45] 2025-05-25 11:54:30,877 | INFO     | [job] retrieve thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:30,990 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:31,000 | INFO     | [job] validate thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:31,001 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:31,243 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:31,269 | INFO     | all job control threads have been joined
[2025-05-25 07:54:45] 2025-05-25 11:54:31,318 | INFO     | [payload] validate_post thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:31,359 | INFO     | [payload] control thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:31,522 | INFO     | [job] job monitor thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:31,538 | INFO     | [data] copytool_in thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:31,648 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:31,853 | INFO     | [data] control thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:31,882 | INFO     | [data] copytool_out thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:31,907 | INFO     | [payload] failed_post thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:32,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 07:54:45] 2025-05-25 11:54:32,275 | INFO     | [job] control thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:33,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 07:54:45] 2025-05-25 11:54:33,140 | INFO     | [job] queue monitor thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:37,057 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 07:54:45] 2025-05-25 11:54:38,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375461934912)>', '<ExcThread(monitor, started 140374823659264)>']
[2025-05-25 07:54:45] 2025-05-25 11:54:38,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 07:54:45] 2025-05-25 11:54:38,940 | INFO     | [monitor] control thread has ended
[2025-05-25 07:54:45] 2025-05-25 11:54:43,269 | INFO     | all workflow threads have been joined
[2025-05-25 07:54:45] 2025-05-25 11:54:43,274 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 07:54:45] 2025-05-25 11:54:43,274 | INFO     | traces error code: 0
[2025-05-25 07:54:45] 2025-05-25 11:54:43,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 07:54:45] 2025-05-25 11:54:44,093 [wrapper] ==== pilot stdout END ====
[2025-05-25 07:54:45] 2025-05-25 11:54:44,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 07:54:45] 2025-05-25 11:54:44,135 [wrapper] pilotpid: 4014088
[2025-05-25 07:54:45] 2025-05-25 11:54:44,150 [wrapper] Pilot exit status: 0
[2025-05-25 07:54:45] 2025-05-25 11:54:44,325 [wrapper] pandaids: 6665684210
[2025-05-25 07:54:45] 2025-05-25 11:54:44,646 [wrapper] cleanup supervisor_pilot 1830410 4014089
[2025-05-25 07:54:45] 2025-05-25 11:54:44,671 [wrapper] Test setup, not cleaning
[2025-05-25 07:54:45] 2025-05-25 11:54:44,691 [wrapper] apfmon messages muted
[2025-05-25 07:54:45] 2025-05-25 11:54:44,714 [wrapper] ==== wrapper stdout END ====
[2025-05-25 07:54:45] 2025-05-25 11:54:44,779 [wrapper] ==== wrapper stderr END ====
[2025-05-25 07:54:45]  *** Error codes and diagnostics ***
[2025-05-25 07:54:45]     "exeErrorCode": 0,
[2025-05-25 07:54:45]     "exeErrorDiag": "",
[2025-05-25 07:54:45]     "pilotErrorCode": 0,
[2025-05-25 07:54:45]     "pilotErrorDiag": "",
[2025-05-25 07:54:45]  *** Listing of results directory ***
[2025-05-25 07:54:45] total 416140
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas    495897 May 24 20:23 pilot3.tar.gz
[2025-05-25 07:54:45] -rwx------. 1 boincer umatlas     37140 May 24 20:25 runpilot2-wrapper.sh
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas      5111 May 24 20:25 queuedata.json
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas       100 May 25 02:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 07:54:45] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 02:27 run_atlas
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas       105 May 25 02:27 job.xml
[2025-05-25 07:54:45] -rw-r--r--. 2 boincer umatlas 223753987 May 25 02:27 EVNT.44871834._001054.pool.root.1
[2025-05-25 07:54:45] -rw-r--r--. 2 boincer umatlas     15093 May 25 02:27 start_atlas.sh
[2025-05-25 07:54:45] drwxrwx--x. 2 boincer umatlas      4096 May 25 02:27 shared
[2025-05-25 07:54:45] -rw-r--r--. 2 boincer umatlas    508878 May 25 02:27 input.tar.gz
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas         0 May 25 02:27 boinc_lockfile
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas      2559 May 25 02:27 pandaJob.out
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas    990811 May 25 02:28 agis_schedconf.cvmfs.json
[2025-05-25 07:54:45] drwx------. 4 boincer umatlas      4096 May 25 02:28 pilot3
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas      6856 May 25 07:45 init_data.xml
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas 194564117 May 25 07:52 HITS.44871837._026431.pool.root.1
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas       531 May 25 07:52 boinc_task_state.xml
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas      1044 May 25 07:53 memory_monitor_summary.json
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas   1596740 May 25 07:53 agis_ddmendpoints.agis.ALL.json
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas    427635 May 25 07:53 log.44871837._026431.job.log.tgz.1
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas      7724 May 25 07:54 heartbeat.json
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas        95 May 25 07:54 pilot_heartbeat.json
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas      4476 May 25 07:54 pilotlog.txt
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas      8192 May 25 07:54 boinc_mmap_file
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas   1558126 May 25 07:54 log.44871837._026431.job.log.1
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas       357 May 25 07:54 output.list
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas       620 May 25 07:54 runtime_log
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas   2007040 May 25 07:54 result.tar.gz
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas      8660 May 25 07:54 runtime_log.err
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas       656 May 25 07:54 LPLODmwLEd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZySKDmU5AGlm.diag
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas        28 May 25 07:54 wrapper_checkpoint.txt
[2025-05-25 07:54:45] -rw-r--r--. 1 boincer umatlas     21229 May 25 07:54 stderr.txt
[2025-05-25 07:54:45] HITS file was successfully produced:
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas 194564117 May 25 07:52 shared/HITS.pool.root.1
[2025-05-25 07:54:45]  *** Contents of shared directory: ***
[2025-05-25 07:54:45] total 411004
[2025-05-25 07:54:45] -rw-r--r--. 2 boincer umatlas 223753987 May 25 02:27 ATLAS.root_0
[2025-05-25 07:54:45] -rw-r--r--. 2 boincer umatlas     15093 May 25 02:27 start_atlas.sh
[2025-05-25 07:54:45] -rw-r--r--. 2 boincer umatlas    508878 May 25 02:27 input.tar.gz
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas 194564117 May 25 07:52 HITS.pool.root.1
[2025-05-25 07:54:45] -rw-------. 1 boincer umatlas   2007040 May 25 07:54 result.tar.gz
07:54:47 (3999782): run_atlas exited; CPU time 45733.677159
07:54:47 (3999782): called boinc_finish(0)

</stderr_txt>
]]>

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