Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:46:31 (3965222): wrapper (7.7.26015): starting
01:46:31 (3965222): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 01:46:31] Arguments: --nthreads 8
[2025-05-25 01:46:31] Threads: 8
[2025-05-25 01:46:31] Checking for CVMFS
[2025-05-25 01:46:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 01:46:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 01:46:31] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 01:46:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 01:46:32] 2.12.6.0 383503 8707 348032 146391 0 353 31046977 32935937 37782 16776704 0 68852134 99.625 67525857 21943 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 01:46:32] CVMFS is ok
[2025-05-25 01:46:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 01:46:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 01:46:32] Further information can be found at the LHC@home message board.
[2025-05-25 01:46:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 01:46:32] Checking for apptainer binary...
[2025-05-25 01:46:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 01:46:32] Running /usr/bin/apptainer --version
[2025-05-25 01:46:33] apptainer version 1.4.1-1.el9
[2025-05-25 01:46:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 01:46:33] c7-2-14.aglt2.org
[2025-05-25 01:46:33] apptainer works
[2025-05-25 01:46:33] Set ATHENA_PROC_NUMBER=8
[2025-05-25 01:46:33] Set ATHENA_CORE_NUMBER=8
[2025-05-25 01:46:33] Starting ATLAS job with PandaID=6665378638
[2025-05-25 01:46:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 07:55:19]  *** The last 200 lines of the pilot log: ***
[2025-05-25 07:55:20] 2025-05-25 09:35:10,371 | INFO     | monitor loop #707: job 0:6665378638 is in state 'finished'
[2025-05-25 07:55:20] 2025-05-25 09:35:10,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 07:55:20] 2025-05-25 09:35:12,886 | INFO     | monitor loop #708: job 0:6665378638 is in state 'finished'
[2025-05-25 07:55:20] 2025-05-25 09:35:12,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 07:55:20] 2025-05-25 09:35:13,971 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 07:55:20] 2025-05-25 09:35:13,972 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6665378638/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 07:55:20] 2025-05-25 09:35:13,973 | INFO     | extracted standard info from prmon json
[2025-05-25 07:55:20] 2025-05-25 09:35:13,973 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 07:55:20] 2025-05-25 09:35:13,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 07:55:20] 2025-05-25 09:35:13,973 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 07:55:20] 2025-05-25 09:35:13,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 07:55:20] 2025-05-25 09:35:13,997 | INFO     | fitting pss+swap vs Time
[2025-05-25 07:55:20] 2025-05-25 09:35:13,997 | INFO     | sum of square deviations: 3438633695.713007
[2025-05-25 07:55:20] 2025-05-25 09:35:13,998 | INFO     | sum of deviations: 8947619144.2287
[2025-05-25 07:55:20] 2025-05-25 09:35:13,998 | INFO     | mean x: 1748158857.0358744
[2025-05-25 07:55:20] 2025-05-25 09:35:13,999 | INFO     | mean y: 2176336.5964125562
[2025-05-25 07:55:20] 2025-05-25 09:35:13,999 | INFO     | -- intersect: -4546682611.615512
[2025-05-25 07:55:20] 2025-05-25 09:35:13,999 | INFO     | intersect: -4546682611.615512
[2025-05-25 07:55:20] 2025-05-25 09:35:13,999 | INFO     | chi2: 1.7102769313932813
[2025-05-25 07:55:20] 2025-05-25 09:35:13,999 | INFO     | sum of square deviations: 3212483058.2064137
[2025-05-25 07:55:20] 2025-05-25 09:35:14,000 | INFO     | sum of deviations: 10551897477.811926
[2025-05-25 07:55:20] 2025-05-25 09:35:14,000 | INFO     | mean x: 1748158704.5366971
[2025-05-25 07:55:20] 2025-05-25 09:35:14,000 | INFO     | mean y: 2177401.711009174
[2025-05-25 07:55:20] 2025-05-25 09:35:14,000 | INFO     | -- intersect: -5739920250.164138
[2025-05-25 07:55:20] 2025-05-25 09:35:14,000 | INFO     | intersect: -5739920250.164138
[2025-05-25 07:55:20] 2025-05-25 09:35:14,001 | INFO     | chi2: 1.7051456319164577
[2025-05-25 07:55:20] 2025-05-25 09:35:14,001 | INFO     | current chi2=1.7051456319164577 (change=0.3000274039037253 %)
[2025-05-25 07:55:20] 2025-05-25 09:35:14,001 | INFO     | right removable region: 217
[2025-05-25 07:55:20] 2025-05-25 09:35:14,001 | INFO     | sum of square deviations: 3212478178.2064137
[2025-05-25 07:55:20] 2025-05-25 09:35:14,002 | INFO     | sum of deviations: -17032135697.229362
[2025-05-25 07:55:20] 2025-05-25 09:35:14,002 | INFO     | mean x: 1748159009.5366971
[2025-05-25 07:55:20] 2025-05-25 09:35:14,002 | INFO     | mean y: 2193640.4036697247
[2025-05-25 07:55:20] 2025-05-25 09:35:14,002 | INFO     | -- intersect: 9270702193.319965
[2025-05-25 07:55:20] 2025-05-25 09:35:14,002 | INFO     | intersect: 9270702193.319965
[2025-05-25 07:55:20] 2025-05-25 09:35:14,002 | INFO     | chi2: 0.364467255732598
[2025-05-25 07:55:20] 2025-05-25 09:35:14,003 | INFO     | current chi2=0.364467255732598 (change=78.6895765801107 %)
[2025-05-25 07:55:20] 2025-05-25 09:35:14,003 | INFO     | sum of square deviations: 2996475682.7699537
[2025-05-25 07:55:20] 2025-05-25 09:35:14,004 | INFO     | sum of deviations: -9752603117.563395
[2025-05-25 07:55:20] 2025-05-25 09:35:14,004 | INFO     | mean x: 1748159162.0328639
[2025-05-25 07:55:20] 2025-05-25 09:35:14,004 | INFO     | mean y: 2188454.3661971833
[2025-05-25 07:55:20] 2025-05-25 09:35:14,004 | INFO     | -- intersect: 5691906742.97866
[2025-05-25 07:55:20] 2025-05-25 09:35:14,004 | INFO     | intersect: 5691906742.97866
[2025-05-25 07:55:20] 2025-05-25 09:35:14,004 | INFO     | chi2: 0.2924586147973171
[2025-05-25 07:55:20] 2025-05-25 09:35:14,004 | INFO     | current chi2=0.2924586147973171 (change=19.757231905659065 %)
[2025-05-25 07:55:20] 2025-05-25 09:35:14,004 | INFO     | left removable region: 20
[2025-05-25 07:55:20] 2025-05-25 09:35:14,005 | INFO     | sum of square deviations: 2370674119.817266
[2025-05-25 07:55:20] 2025-05-25 09:35:14,005 | INFO     | sum of deviations: 10440843297.076141
[2025-05-25 07:55:20] 2025-05-25 09:35:14,006 | INFO     | mean x: 1748159284.0304568
[2025-05-25 07:55:20] 2025-05-25 09:35:14,006 | INFO     | mean y: 2176253.4873096445
[2025-05-25 07:55:20] 2025-05-25 09:35:14,006 | INFO     | -- intersect: -7697008122.093473
[2025-05-25 07:55:20] 2025-05-25 09:35:14,006 | INFO     | intersect: -7697008122.093473
[2025-05-25 07:55:20] 2025-05-25 09:35:14,006 | INFO     | chi2: 0.06066574001104252
[2025-05-25 07:55:20] 2025-05-25 09:35:14,006 | INFO     | -- intersect: -7697008122.093473
[2025-05-25 07:55:20] 2025-05-25 09:35:14,006 | INFO     | current memory leak: 4.40 B/s (using 197 data points, chi2=0.06)
[2025-05-25 07:55:20] 2025-05-25 09:35:14,007 | INFO     | ..............................
[2025-05-25 07:55:20] 2025-05-25 09:35:14,007 | INFO     | . Timing measurements:
[2025-05-25 07:55:20] 2025-05-25 09:35:14,007 | INFO     | . get job = 0 s
[2025-05-25 07:55:20] 2025-05-25 09:35:14,007 | INFO     | . initial setup = 5 s
[2025-05-25 07:55:20] 2025-05-25 09:35:14,007 | INFO     | . payload setup = 15 s
[2025-05-25 07:55:20] 2025-05-25 09:35:14,007 | INFO     | . stage-in = 0 s
[2025-05-25 07:55:20] 2025-05-25 09:35:14,007 | INFO     | . payload execution = 13603 s
[2025-05-25 07:55:20] 2025-05-25 09:35:14,007 | INFO     | . stage-out = 3 s
[2025-05-25 07:55:20] 2025-05-25 09:35:14,007 | INFO     | . log creation = 0 s
[2025-05-25 07:55:20] 2025-05-25 09:35:14,007 | INFO     | ..............................
[2025-05-25 07:55:20] 2025-05-25 09:35:14,463 | INFO     | PID=3973382 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 07:55:20] 2025-05-25 09:35:14,463 | INFO     | .. there are 74 such processes running
[2025-05-25 07:55:20] 2025-05-25 09:35:14,599 | INFO     | 
[2025-05-25 07:55:20] 2025-05-25 09:35:14,599 | INFO     | job summary report
[2025-05-25 07:55:20] 2025-05-25 09:35:14,599 | INFO     | --------------------------------------------------
[2025-05-25 07:55:20] 2025-05-25 09:35:14,599 | INFO     | PanDA job id: 6665378638
[2025-05-25 07:55:20] 2025-05-25 09:35:14,599 | INFO     | task id: 44871837
[2025-05-25 07:55:20] 2025-05-25 09:35:14,599 | INFO     | errors: (none)
[2025-05-25 07:55:20] 2025-05-25 09:35:14,599 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 07:55:20] 2025-05-25 09:35:14,599 | INFO     | pilot state: finished 
[2025-05-25 07:55:20] 2025-05-25 09:35:14,599 | INFO     | transexitcode: 0
[2025-05-25 07:55:20] 2025-05-25 09:35:14,599 | INFO     | exeerrorcode: 0
[2025-05-25 07:55:20] 2025-05-25 09:35:14,599 | INFO     | exeerrordiag: 
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | exitcode: 0
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | exitmsg: OK
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | cpuconsumptiontime: 38101 s
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | nevents: 400
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | neventsw: 0
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | pid: 3994907
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | pgrp: 3994907
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | corecount: 8
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | event service: False
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | sizes: {0: 2392911, 1: 2393596, 2: 2393795, 12: 2393795, 17: 2394029, 23: 2394057, 13623: 2423974, 13627: 2432971, 13651: 2433085}
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | --------------------------------------------------
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | 
[2025-05-25 07:55:20] 2025-05-25 09:35:14,600 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-25 07:55:20] 2025-05-25 09:35:14,753 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,754 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,755 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 07:55:20] 2025-05-25 09:35:14,755 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,755 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 07:55:20] 2025-05-25 09:35:14,755 | INFO     | job 6665378638 has completed (purged errors)
[2025-05-25 07:55:20] 2025-05-25 09:35:14,755 | INFO     | overall cleanup function is called
[2025-05-25 07:55:20] 2025-05-25 09:35:15,764 | INFO     | --- collectZombieJob: --- 10, [3994907]
[2025-05-25 07:55:20] 2025-05-25 09:35:15,764 | INFO     | zombie collector waiting for pid 3994907
[2025-05-25 07:55:20] 2025-05-25 09:35:15,764 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 07:55:20] 2025-05-25 09:35:15,764 | INFO     | collected zombie processes
[2025-05-25 07:55:20] 2025-05-25 09:35:15,764 | INFO     | will attempt to kill all subprocesses of pid=3994907
[2025-05-25 07:55:20] 2025-05-25 09:35:16,662 | INFO     | process IDs to be killed: [3994907] (in reverse order)
[2025-05-25 07:55:20] 2025-05-25 09:35:16,986 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 07:55:20] 2025-05-25 09:35:16,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 07:55:20] 2025-05-25 09:35:17,013 | INFO     | did not find any defunct processes belonging to 3994907
[2025-05-25 07:55:20] 2025-05-25 09:35:17,072 | INFO     | did not find any defunct processes belonging to 3994907
[2025-05-25 07:55:20] 2025-05-25 09:35:17,073 | INFO     | ready for new job
[2025-05-25 07:55:20] 2025-05-25 09:35:17,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 07:55:20] 2025-05-25 09:35:17,074 | INFO     | **************************************
[2025-05-25 07:55:20] 2025-05-25 09:35:17,078 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 07:55:20] 2025-05-25 09:35:17,078 | INFO     | **************************************
[2025-05-25 07:55:20] 2025-05-25 09:35:17,078 | INFO     | 
[2025-05-25 07:55:20] 2025-05-25 09:35:17,085 | INFO     | architecture information:
[2025-05-25 07:55:20] 2025-05-25 09:35:17,086 | INFO     | executing command: cat /etc/os-release
[2025-05-25 07:55:20] 2025-05-25 09:35:17,135 | INFO     | cat /etc/os-release:
[2025-05-25 07:55:20] NAME="CentOS Linux"
[2025-05-25 07:55:20] VERSION="7 (Core)"
[2025-05-25 07:55:20] ID="centos"
[2025-05-25 07:55:20] ID_LIKE="rhel fedora"
[2025-05-25 07:55:20] VERSION_ID="7"
[2025-05-25 07:55:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 07:55:20] ANSI_COLOR="0;31"
[2025-05-25 07:55:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 07:55:20] HOME_URL="https://www.centos.org/"
[2025-05-25 07:55:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 07:55:20] 
[2025-05-25 07:55:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 07:55:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 07:55:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 07:55:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 07:55:20] 
[2025-05-25 07:55:20] 2025-05-25 09:35:17,135 | INFO     | **************************************
[2025-05-25 07:55:20] 2025-05-25 09:35:17,651 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-25 07:55:20] 2025-05-25 09:35:17,712 | INFO     | sufficient remaining disk space (71791804416 B)
[2025-05-25 07:55:20] 2025-05-25 09:35:17,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 07:55:20] 2025-05-25 09:35:17,712 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 07:55:20] 2025-05-25 09:35:17,712 | INFO     | update_server=False
[2025-05-25 07:55:20] 2025-05-25 09:35:17,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 07:55:20] 2025-05-25 09:35:17,909 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 07:55:20] 2025-05-25 09:35:17,909 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 07:55:20] 2025-05-25 09:35:17,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 07:55:20] 2025-05-25 09:35:17,909 | INFO     | will abort loop
[2025-05-25 07:55:20] 2025-05-25 09:35:17,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 07:55:20] 2025-05-25 09:35:18,439 | INFO     | all payload control threads have been joined
[2025-05-25 07:55:20] 2025-05-25 09:35:18,492 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 07:55:20] 2025-05-25 09:35:18,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 07:55:20] 2025-05-25 09:35:18,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 07:55:20] 2025-05-25 09:35:18,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 07:55:20] 2025-05-25 09:35:18,718 | INFO     | [job] retrieve thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:18,771 | INFO     | [job] validate thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:18,779 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:18,796 | INFO     | all data control threads have been joined
[2025-05-25 07:55:20] 2025-05-25 09:35:18,914 | INFO     | [job] job monitor thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:19,098 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:19,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 07:55:20] 2025-05-25 09:35:19,252 | INFO     | all job control threads have been joined
[2025-05-25 07:55:20] 2025-05-25 09:35:19,378 | INFO     | [payload] validate_post thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:19,445 | INFO     | [payload] control thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:19,572 | INFO     | [data] copytool_in thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:19,656 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:19,756 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:19,802 | INFO     | [data] control thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:19,919 | INFO     | [data] copytool_out thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:20,123 | INFO     | [job] queue monitor thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:20,258 | INFO     | [job] control thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:20,304 | INFO     | [payload] failed_post thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:22,579 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 07:55:20] 2025-05-25 09:35:24,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140715020875584)>', '<ExcThread(monitor, started 140714386118400)>']
[2025-05-25 07:55:20] 2025-05-25 09:35:24,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 07:55:20] 2025-05-25 09:35:24,548 | INFO     | [monitor] control thread has ended
[2025-05-25 07:55:20] 2025-05-25 09:35:29,107 | INFO     | all workflow threads have been joined
[2025-05-25 07:55:20] 2025-05-25 09:35:29,107 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 07:55:20] 2025-05-25 09:35:29,107 | INFO     | traces error code: 0
[2025-05-25 07:55:20] 2025-05-25 09:35:29,107 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 07:55:20] 2025-05-25 09:35:29,342 [wrapper] ==== pilot stdout END ====
[2025-05-25 07:55:20] 2025-05-25 09:35:29,402 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 07:55:20] 2025-05-25 09:35:29,409 [wrapper] pilotpid: 3973382
[2025-05-25 07:55:20] 2025-05-25 09:35:29,416 [wrapper] Pilot exit status: 0
[2025-05-25 07:55:20] 2025-05-25 09:35:29,464 [wrapper] pandaids: 6665378638
[2025-05-25 07:55:20] 2025-05-25 09:35:29,762 [wrapper] cleanup supervisor_pilot 2843900 3973383
[2025-05-25 07:55:20] 2025-05-25 09:35:29,770 [wrapper] Test setup, not cleaning
[2025-05-25 07:55:20] 2025-05-25 09:35:29,809 [wrapper] apfmon messages muted
[2025-05-25 07:55:20] 2025-05-25 09:35:29,834 [wrapper] ==== wrapper stdout END ====
[2025-05-25 07:55:20] 2025-05-25 09:35:29,847 [wrapper] ==== wrapper stderr END ====
[2025-05-25 07:55:20]  *** Error codes and diagnostics ***
[2025-05-25 07:55:20]     "exeErrorCode": 0,
[2025-05-25 07:55:20]     "exeErrorDiag": "",
[2025-05-25 07:55:20]     "pilotErrorCode": 0,
[2025-05-25 07:55:20]     "pilotErrorDiag": "",
[2025-05-25 07:55:20]  *** Listing of results directory ***
[2025-05-25 07:55:20] total 413052
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas    495897 May 24 05:43 pilot3.tar.gz
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas      5111 May 24 05:51 queuedata.json
[2025-05-25 07:55:20] -rwx------. 1 boincer umatlas     37140 May 24 05:51 runpilot2-wrapper.sh
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas       100 May 25 01:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 07:55:20] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 01:46 run_atlas
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas       105 May 25 01:46 job.xml
[2025-05-25 07:55:20] -rw-r--r--. 2 boincer umatlas 221330753 May 25 01:46 EVNT.44871834._000590.pool.root.1
[2025-05-25 07:55:20] -rw-r--r--. 2 boincer umatlas     15093 May 25 01:46 start_atlas.sh
[2025-05-25 07:55:20] drwxrwx--x. 2 boincer umatlas      4096 May 25 01:46 shared
[2025-05-25 07:55:20] -rw-r--r--. 2 boincer umatlas    508869 May 25 01:46 input.tar.gz
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas         0 May 25 01:46 boinc_lockfile
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas      2558 May 25 01:46 pandaJob.out
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas    990811 May 25 01:46 agis_schedconf.cvmfs.json
[2025-05-25 07:55:20] drwx------. 4 boincer umatlas      4096 May 25 01:47 pilot3
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas 195038100 May 25 05:34 HITS.44871837._014737.pool.root.1
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas       530 May 25 05:34 boinc_task_state.xml
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas      1033 May 25 05:34 memory_monitor_summary.json
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas   1596740 May 25 05:34 agis_ddmendpoints.agis.ALL.json
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas    370731 May 25 05:34 log.44871837._014737.job.log.tgz.1
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas      7690 May 25 05:35 heartbeat.json
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas        95 May 25 05:35 pilot_heartbeat.json
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas      4539 May 25 05:35 pilotlog.txt
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas   1011518 May 25 05:35 log.44871837._014737.job.log.1
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas       357 May 25 05:35 output.list
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas       620 May 25 05:35 runtime_log
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas   1402880 May 25 05:35 result.tar.gz
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas       655 May 25 05:35 ZSZKDmmi0c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjWMKDmHTIdMm.diag
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas      8655 May 25 05:35 runtime_log.err
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas      6933 May 25 07:55 init_data.xml
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas      8192 May 25 07:55 boinc_mmap_file
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas        27 May 25 07:55 wrapper_checkpoint.txt
[2025-05-25 07:55:20] -rw-r--r--. 1 boincer umatlas     21214 May 25 07:55 stderr.txt
[2025-05-25 07:55:20] HITS file was successfully produced:
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas 195038100 May 25 05:34 shared/HITS.pool.root.1
[2025-05-25 07:55:20]  *** Contents of shared directory: ***
[2025-05-25 07:55:20] total 408508
[2025-05-25 07:55:20] -rw-r--r--. 2 boincer umatlas 221330753 May 25 01:46 ATLAS.root_0
[2025-05-25 07:55:20] -rw-r--r--. 2 boincer umatlas     15093 May 25 01:46 start_atlas.sh
[2025-05-25 07:55:20] -rw-r--r--. 2 boincer umatlas    508869 May 25 01:46 input.tar.gz
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas 195038100 May 25 05:34 HITS.pool.root.1
[2025-05-25 07:55:20] -rw-------. 1 boincer umatlas   1402880 May 25 05:35 result.tar.gz
07:55:22 (3965222): run_atlas exited; CPU time 38749.266279
07:55:22 (3965222): called boinc_finish(0)

</stderr_txt>
]]>

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