Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:03:33 (1964722): wrapper (7.7.26015): starting
20:03:33 (1964722): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 20:03:33] Arguments: --nthreads 6
[2025-05-25 20:03:33] Threads: 6
[2025-05-25 20:03:33] Checking for CVMFS
[2025-05-25 20:03:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 20:03:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 20:03:33] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 20:03:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 20:03:34] 2.11.5.0 1050432 1770 75448 146399 1 187 19472482 20971521 929 130560 0 2481774 99.994 517213 96 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 20:03:34] CVMFS is ok
[2025-05-25 20:03:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 20:03:34] Checking for apptainer binary...
[2025-05-25 20:03:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 20:03:34] Running /usr/bin/apptainer --version
[2025-05-25 20:03:34] apptainer version 1.3.6-1.el9
[2025-05-25 20:03:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 20:03:34] testio006
[2025-05-25 20:03:34] apptainer works
[2025-05-25 20:03:34] Set ATHENA_PROC_NUMBER=6
[2025-05-25 20:03:34] Set ATHENA_CORE_NUMBER=6
[2025-05-25 20:03:34] Starting ATLAS job with PandaID=6665682885
[2025-05-25 20:03:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 21:42:19]  *** The last 200 lines of the pilot log: ***
[2025-05-25 21:42:19]  guid=4aee45c9-d68d-4916-91c3-bae1f83de101
[2025-05-25 21:42:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-25 21:42:19]  is_altstaged=None
[2025-05-25 21:42:19]  is_tar=False
[2025-05-25 21:42:19]  lfn=log.44871837._025556.job.log.tgz.1
[2025-05-25 21:42:19]  mtime=0
[2025-05-25 21:42:19]  protocol_id=None
[2025-05-25 21:42:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-25 21:42:19]  replicas=None
[2025-05-25 21:42:19]  scope=mc23_13p6TeV
[2025-05-25 21:42:19]  status=None
[2025-05-25 21:42:19]  status_code=0
[2025-05-25 21:42:19]  storage_token=
[2025-05-25 21:42:19]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6665682885/log.44871837._025556.job.log.tgz.1
[2025-05-25 21:42:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/85/log.44871837._025556.job.log.tgz.1
[2025-05-25 21:42:19]  workdir=None
[2025-05-25 21:42:19] ]
[2025-05-25 21:42:19] 2025-05-25 12:41:54,709 | INFO     | transferring file log.44871837._025556.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6665682885/log.44871837._025556.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-25 21:42:19] 2025-05-25 12:41:54,709 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6665682885/log.44871837._025556.job.log.tgz.1 /var/lib/boinc/slots/1/log.44871837._025556.job
[2025-05-25 21:42:19] 2025-05-25 12:41:54,719 | INFO     | adding to output.list: log.44871837._025556.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/85/log.44871837._025556.job.log.tg
[2025-05-25 21:42:19] 2025-05-25 12:41:54,719 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-25 21:42:19] 2025-05-25 12:41:54,719 | INFO     | summary of transferred files:
[2025-05-25 21:42:19] 2025-05-25 12:41:54,719 | INFO     |  -- lfn=log.44871837._025556.job.log.tgz.1, status_code=0, status=transferred
[2025-05-25 21:42:19] 2025-05-25 12:41:54,719 | INFO     | stage-out finished correctly
[2025-05-25 21:42:19] 2025-05-25 12:41:54,767 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-25 21:42:19] 2025-05-25 12:41:54,813 | INFO     | job 6665682885 has state=finished
[2025-05-25 21:42:19] 2025-05-25 12:41:54,813 | INFO     | preparing for final server update for job 6665682885 in state='finished'
[2025-05-25 21:42:19] 2025-05-25 12:41:54,814 | INFO     | this job has now completed (state=finished)
[2025-05-25 21:42:19] 2025-05-25 12:41:54,814 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 21:42:19] 2025-05-25 12:41:54,814 | INFO     | log transfer has been attempted: DONE
[2025-05-25 21:42:19] 2025-05-25 12:41:54,814 | INFO     | job 6665682885 has finished - writing final server update
[2025-05-25 21:42:19] 2025-05-25 12:41:54,814 | INFO     | total number of processed events: 400 (read)
[2025-05-25 21:42:19] 2025-05-25 12:41:54,815 | INFO     | executing command: lscpu
[2025-05-25 21:42:19] 2025-05-25 12:41:54,829 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 21:42:19] 2025-05-25 12:41:58,855 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 21:42:19] 2025-05-25 12:41:58,856 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6665682885/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 21:42:19] 2025-05-25 12:41:58,856 | INFO     | extracted standard info from prmon json
[2025-05-25 21:42:19] 2025-05-25 12:41:58,856 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 21:42:19] 2025-05-25 12:41:58,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 21:42:19] 2025-05-25 12:41:58,856 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 21:42:19] 2025-05-25 12:41:58,856 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 21:42:19] 2025-05-25 12:41:58,857 | INFO     | fitting pss+swap vs Time
[2025-05-25 21:42:19] 2025-05-25 12:41:58,858 | INFO     | sum of square deviations: 226022842.5
[2025-05-25 21:42:19] 2025-05-25 12:41:58,858 | INFO     | sum of deviations: 18576546245.000004
[2025-05-25 21:42:19] 2025-05-25 12:41:58,858 | INFO     | mean x: 1748174062.5
[2025-05-25 21:42:19] 2025-05-25 12:41:58,858 | INFO     | mean y: 2379277.2666666666
[2025-05-25 21:42:19] 2025-05-25 12:41:58,858 | INFO     | -- intersect: -143677949476.85373
[2025-05-25 21:42:19] 2025-05-25 12:41:58,858 | INFO     | intersect: -143677949476.85373
[2025-05-25 21:42:19] 2025-05-25 12:41:58,858 | INFO     | chi2: 1.4743196577098536
[2025-05-25 21:42:19] 2025-05-25 12:41:58,858 | INFO     | -- intersect: -143677949476.85373
[2025-05-25 21:42:19] 2025-05-25 12:41:58,858 | INFO     | current memory leak: 82.19 B/s (using 90 data points, chi2=1.47)
[2025-05-25 21:42:19] 2025-05-25 12:41:58,858 | INFO     | ..............................
[2025-05-25 21:42:19] 2025-05-25 12:41:58,858 | INFO     | . Timing measurements:
[2025-05-25 21:42:19] 2025-05-25 12:41:58,859 | INFO     | . get job = 0 s
[2025-05-25 21:42:19] 2025-05-25 12:41:58,859 | INFO     | . initial setup = 4 s
[2025-05-25 21:42:19] 2025-05-25 12:41:58,859 | INFO     | . payload setup = 3 s
[2025-05-25 21:42:19] 2025-05-25 12:41:58,859 | INFO     | . stage-in = 0 s
[2025-05-25 21:42:19] 2025-05-25 12:41:58,859 | INFO     | . payload execution = 5870 s
[2025-05-25 21:42:19] 2025-05-25 12:41:58,859 | INFO     | . stage-out = 0 s
[2025-05-25 21:42:19] 2025-05-25 12:41:58,859 | INFO     | . log creation = 0 s
[2025-05-25 21:42:19] 2025-05-25 12:41:58,859 | INFO     | ..............................
[2025-05-25 21:42:19] 2025-05-25 12:41:58,908 | INFO     | 
[2025-05-25 21:42:19] 2025-05-25 12:41:58,908 | INFO     | job summary report
[2025-05-25 21:42:19] 2025-05-25 12:41:58,908 | INFO     | --------------------------------------------------
[2025-05-25 21:42:19] 2025-05-25 12:41:58,908 | INFO     | PanDA job id: 6665682885
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | task id: 44871837
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | errors: (none)
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | pilot state: finished 
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | transexitcode: 0
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | exeerrorcode: 0
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | exeerrordiag: 
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | exitcode: 0
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | exitmsg: OK
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | cpuconsumptiontime: 30739 s
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | nevents: 400
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | neventsw: 0
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | pid: 1974988
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | pgrp: 1974988
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | corecount: 6
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | event service: False
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | sizes: {0: 2393570, 1: 2393769, 3: 2393975, 11: 2394003, 5877: 2420619, 5878: 2429744, 5882: 2429858}
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | --------------------------------------------------
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | 
[2025-05-25 21:42:19] 2025-05-25 12:41:58,909 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-05-25 21:42:19] 2025-05-25 12:41:58,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,919 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,919 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | job 6665682885 has completed (purged errors)
[2025-05-25 21:42:19] 2025-05-25 12:41:58,920 | INFO     | overall cleanup function is called
[2025-05-25 21:42:19] 2025-05-25 12:41:59,927 | INFO     | --- collectZombieJob: --- 10, [1974988]
[2025-05-25 21:42:19] 2025-05-25 12:41:59,927 | INFO     | zombie collector waiting for pid 1974988
[2025-05-25 21:42:19] 2025-05-25 12:41:59,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 21:42:19] 2025-05-25 12:41:59,927 | INFO     | collected zombie processes
[2025-05-25 21:42:19] 2025-05-25 12:41:59,927 | INFO     | will attempt to kill all subprocesses of pid=1974988
[2025-05-25 21:42:19] 2025-05-25 12:41:59,985 | INFO     | process IDs to be killed: [1974988] (in reverse order)
[2025-05-25 21:42:19] 2025-05-25 12:42:00,011 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 21:42:19] 2025-05-25 12:42:00,011 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 21:42:19] 2025-05-25 12:42:00,016 | INFO     | did not find any defunct processes belonging to 1974988
[2025-05-25 21:42:19] 2025-05-25 12:42:00,020 | INFO     | did not find any defunct processes belonging to 1974988
[2025-05-25 21:42:19] 2025-05-25 12:42:00,020 | INFO     | ready for new job
[2025-05-25 21:42:19] 2025-05-25 12:42:00,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 21:42:19] 2025-05-25 12:42:00,021 | INFO     | **************************************
[2025-05-25 21:42:19] 2025-05-25 12:42:00,021 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 21:42:19] 2025-05-25 12:42:00,021 | INFO     | **************************************
[2025-05-25 21:42:19] 2025-05-25 12:42:00,021 | INFO     | 
[2025-05-25 21:42:19] 2025-05-25 12:42:00,022 | INFO     | architecture information:
[2025-05-25 21:42:19] 2025-05-25 12:42:00,022 | INFO     | executing command: cat /etc/os-release
[2025-05-25 21:42:19] 2025-05-25 12:42:00,030 | INFO     | cat /etc/os-release:
[2025-05-25 21:42:19] NAME="CentOS Linux"
[2025-05-25 21:42:19] VERSION="7 (Core)"
[2025-05-25 21:42:19] ID="centos"
[2025-05-25 21:42:19] ID_LIKE="rhel fedora"
[2025-05-25 21:42:19] VERSION_ID="7"
[2025-05-25 21:42:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 21:42:19] ANSI_COLOR="0;31"
[2025-05-25 21:42:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 21:42:19] HOME_URL="https://www.centos.org/"
[2025-05-25 21:42:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 21:42:19] 
[2025-05-25 21:42:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 21:42:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 21:42:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 21:42:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 21:42:19] 
[2025-05-25 21:42:19] 2025-05-25 12:42:00,030 | INFO     | **************************************
[2025-05-25 21:42:19] 2025-05-25 12:42:00,074 | WARNING  | process 1974988 can no longer be monitored (due to stat problems) - aborting
[2025-05-25 21:42:19] 2025-05-25 12:42:00,120 | INFO     | using path: /var/lib/boinc/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 21:42:19] 2025-05-25 12:42:00,177 | INFO     | number of running child processes to parent process 1974988: 1
[2025-05-25 21:42:19] 2025-05-25 12:42:00,178 | INFO     | maximum number of monitored processes: 6
[2025-05-25 21:42:19] 2025-05-25 12:42:00,178 | INFO     | aborting job monitoring since job object (job id=6665682885) has expired
[2025-05-25 21:42:19] 2025-05-25 12:42:00,532 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-05-25 21:42:19] 2025-05-25 12:42:00,541 | INFO     | sufficient remaining disk space (77357645824 B)
[2025-05-25 21:42:19] 2025-05-25 12:42:00,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 21:42:19] 2025-05-25 12:42:00,541 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 21:42:19] 2025-05-25 12:42:00,541 | INFO     | update_server=False
[2025-05-25 21:42:19] 2025-05-25 12:42:00,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 21:42:19] 2025-05-25 12:42:00,542 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 21:42:19] 2025-05-25 12:42:00,542 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 21:42:19] 2025-05-25 12:42:00,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 21:42:19] 2025-05-25 12:42:00,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 21:42:19] 2025-05-25 12:42:00,542 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 21:42:19] 2025-05-25 12:42:00,542 | INFO     | will abort loop
[2025-05-25 21:42:19] 2025-05-25 12:42:00,542 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 21:42:19] 2025-05-25 12:42:00,542 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 21:42:19] 2025-05-25 12:42:00,819 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 21:42:19] 2025-05-25 12:42:01,196 | INFO     | all payload control threads have been joined
[2025-05-25 21:42:19] 2025-05-25 12:42:01,204 | INFO     | all job control threads have been joined
[2025-05-25 21:42:19] 2025-05-25 12:42:01,274 | INFO     | all data control threads have been joined
[2025-05-25 21:42:19] 2025-05-25 12:42:01,547 | INFO     | [job] retrieve thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:01,547 | INFO     | [job] queue monitor thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:01,548 | INFO     | [job] job monitor thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:01,759 | INFO     | [payload] validate_post thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:02,201 | INFO     | [payload] control thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:02,210 | INFO     | [job] control thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:02,279 | INFO     | [data] control thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:02,548 | INFO     | [data] copytool_out thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:02,636 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:02,657 | INFO     | [job] validate thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:02,670 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:02,725 | INFO     | [data] copytool_in thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:02,732 | INFO     | [payload] failed_post thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:02,806 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:04,826 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:11,489 | INFO     | job.realtimelogging is not enabled
[2025-05-25 21:42:19] 2025-05-25 12:42:12,494 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 21:42:19] 2025-05-25 12:42:14,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140530599376704)>', '<ExcThread(monitor, started 140530088392448)>']
[2025-05-25 21:42:19] 2025-05-25 12:42:14,617 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 21:42:19] 2025-05-25 12:42:14,617 | INFO     | [monitor] control thread has ended
[2025-05-25 21:42:19] 2025-05-25 12:42:19,144 | INFO     | all workflow threads have been joined
[2025-05-25 21:42:19] 2025-05-25 12:42:19,145 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 21:42:19] 2025-05-25 12:42:19,145 | INFO     | traces error code: 0
[2025-05-25 21:42:19] 2025-05-25 12:42:19,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 21:42:19] 2025-05-25 12:42:19,199 [wrapper] ==== pilot stdout END ====
[2025-05-25 21:42:19] 2025-05-25 12:42:19,201 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 21:42:19] 2025-05-25 12:42:19,202 [wrapper] pilotpid: 1968435
[2025-05-25 21:42:19] 2025-05-25 12:42:19,204 [wrapper] Pilot exit status: 0
[2025-05-25 21:42:19] 2025-05-25 12:42:19,209 [wrapper] pandaids: 6665682885
[2025-05-25 21:42:19] 2025-05-25 12:42:19,225 [wrapper] cleanup supervisor_pilot 2013442 1968436
[2025-05-25 21:42:19] 2025-05-25 12:42:19,226 [wrapper] Test setup, not cleaning
[2025-05-25 21:42:19] 2025-05-25 12:42:19,228 [wrapper] apfmon messages muted
[2025-05-25 21:42:19] 2025-05-25 12:42:19,229 [wrapper] ==== wrapper stdout END ====
[2025-05-25 21:42:19] 2025-05-25 12:42:19,231 [wrapper] ==== wrapper stderr END ====
[2025-05-25 21:42:19]  *** Error codes and diagnostics ***
[2025-05-25 21:42:19]     "exeErrorCode": 0,
[2025-05-25 21:42:19]     "exeErrorDiag": "",
[2025-05-25 21:42:19]     "pilotErrorCode": 0,
[2025-05-25 21:42:19]     "pilotErrorDiag": "",
[2025-05-25 21:42:19]  *** Listing of results directory ***
[2025-05-25 21:42:19] total 421712
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc    495897 May 25 07:42 pilot3.tar.gz
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc      5111 May 25 08:09 queuedata.json
[2025-05-25 21:42:19] -rwx------. 1 boinc boinc     37140 May 25 08:09 runpilot2-wrapper.sh
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc       100 May 25 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 21:42:19] -rwxr-xr-x. 1 boinc boinc      7986 May 25 20:03 run_atlas
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc       105 May 25 20:03 job.xml
[2025-05-25 21:42:19] -rw-r--r--. 2 boinc boinc 225757855 May 25 20:03 EVNT.44871834._001019.pool.root.1
[2025-05-25 21:42:19] -rw-r--r--. 2 boinc boinc     15093 May 25 20:03 start_atlas.sh
[2025-05-25 21:42:19] drwxrwx--x. 2 boinc boinc        68 May 25 20:03 shared
[2025-05-25 21:42:19] -rw-r--r--. 2 boinc boinc    508877 May 25 20:03 input.tar.gz
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc      9464 May 25 20:03 init_data.xml
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc         0 May 25 20:03 boinc_lockfile
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc      2559 May 25 20:03 pandaJob.out
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc    990811 May 25 20:03 agis_schedconf.cvmfs.json
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc   1596740 May 25 20:03 agis_ddmendpoints.agis.ALL.json
[2025-05-25 21:42:19] drwx------. 4 boinc boinc      4096 May 25 20:03 pilot3
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc        95 May 25 21:41 pilot_heartbeat.json
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc 200553186 May 25 21:41 HITS.44871837._025556.pool.root.1
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc      1019 May 25 21:41 memory_monitor_summary.json
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc    282598 May 25 21:41 log.44871837._025556.job.log.tgz.1
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc      7670 May 25 21:41 heartbeat.json
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc        27 May 25 21:42 wrapper_checkpoint.txt
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc      8192 May 25 21:42 boinc_mmap_file
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc       529 May 25 21:42 boinc_task_state.xml
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc      5069 May 25 21:42 pilotlog.txt
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc    567484 May 25 21:42 log.44871837._025556.job.log.1
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc       357 May 25 21:42 output.list
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc       620 May 25 21:42 runtime_log
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc    870400 May 25 21:42 result.tar.gz
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc      8617 May 25 21:42 runtime_log.err
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc       641 May 25 21:42 Hk2LDmcADd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZoSKDmJyPxnn.diag
[2025-05-25 21:42:19] -rw-r--r--. 1 boinc boinc     20970 May 25 21:42 stderr.txt
[2025-05-25 21:42:19] HITS file was successfully produced:
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc 200553186 May 25 21:41 shared/HITS.pool.root.1
[2025-05-25 21:42:19]  *** Contents of shared directory: ***
[2025-05-25 21:42:19] total 417692
[2025-05-25 21:42:19] -rw-r--r--. 2 boinc boinc 225757855 May 25 20:03 ATLAS.root_0
[2025-05-25 21:42:19] -rw-r--r--. 2 boinc boinc     15093 May 25 20:03 start_atlas.sh
[2025-05-25 21:42:19] -rw-r--r--. 2 boinc boinc    508877 May 25 20:03 input.tar.gz
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc 200553186 May 25 21:41 HITS.pool.root.1
[2025-05-25 21:42:19] -rw-------. 1 boinc boinc    870400 May 25 21:42 result.tar.gz
21:42:21 (1964722): run_atlas exited; CPU time 30791.586381
21:42:21 (1964722): called boinc_finish(0)

</stderr_txt>
]]>

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